View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16513_low_7 (Length: 485)

Name: NF16513_low_7
Description: NF16513
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16513_low_7
NF16513_low_7
[»] chr3 (34 HSPs)
chr3 (17-475)||(34878098-34878556)
chr3 (34-73)||(31452956-31452995)
chr3 (34-66)||(30797824-30797856)
chr3 (34-73)||(311304-311343)
chr3 (34-73)||(5169080-5169119)
chr3 (34-73)||(12096700-12096739)
chr3 (34-73)||(35481176-35481215)
chr3 (34-73)||(36764933-36764972)
chr3 (34-73)||(45374472-45374511)
chr3 (35-66)||(45468824-45468855)
chr3 (34-73)||(47555327-47555366)
chr3 (34-73)||(48508483-48508522)
chr3 (34-73)||(53262389-53262428)
chr3 (34-72)||(45834596-45834634)
chr3 (34-71)||(2133609-2133646)
chr3 (40-73)||(4660162-4660195)
chr3 (33-66)||(23610934-23610967)
chr3 (34-71)||(34067147-34067184)
chr3 (34-71)||(35701097-35701134)
chr3 (34-75)||(43529294-43529335)
chr3 (34-71)||(48532206-48532243)
chr3 (34-66)||(15296155-15296187)
chr3 (34-66)||(27192471-27192503)
chr3 (34-66)||(31454227-31454259)
chr3 (34-66)||(31566163-31566195)
chr3 (34-66)||(37083294-37083326)
chr3 (34-66)||(39512791-39512823)
chr3 (34-66)||(40106622-40106654)
chr3 (37-73)||(41452756-41452792)
chr3 (34-70)||(44102954-44102990)
chr3 (34-66)||(45289093-45289125)
chr3 (34-66)||(48259952-48259984)
chr3 (34-66)||(52139048-52139080)
chr3 (34-66)||(54128627-54128659)
[»] chr2 (33 HSPs)
chr2 (34-74)||(15775839-15775879)
chr2 (34-66)||(11992110-11992142)
chr2 (34-74)||(43573124-43573164)
chr2 (34-73)||(227437-227476)
chr2 (34-73)||(3635318-3635357)
chr2 (34-73)||(12734948-12734987)
chr2 (34-73)||(13188390-13188429)
chr2 (34-73)||(17670716-17670755)
chr2 (34-73)||(38328365-38328404)
chr2 (34-73)||(39029835-39029874)
chr2 (34-72)||(30306280-30306318)
chr2 (34-72)||(35643196-35643234)
chr2 (33-71)||(42543482-42543520)
chr2 (34-72)||(44437717-44437755)
chr2 (34-71)||(1648112-1648149)
chr2 (34-71)||(4807843-4807880)
chr2 (34-71)||(7326157-7326194)
chr2 (34-71)||(9531597-9531634)
chr2 (34-75)||(10403886-10403927)
chr2 (34-71)||(12489799-12489836)
chr2 (37-78)||(12882035-12882076)
chr2 (34-71)||(14444917-14444954)
chr2 (34-71)||(25834926-25834963)
chr2 (34-75)||(28508926-28508967)
chr2 (34-71)||(37520694-37520731)
chr2 (34-71)||(38429657-38429694)
chr2 (34-66)||(2073309-2073341)
chr2 (34-66)||(2901962-2901994)
chr2 (34-66)||(3243655-3243687)
chr2 (34-66)||(12474929-12474961)
chr2 (34-66)||(12520064-12520096)
chr2 (34-66)||(38452688-38452720)
chr2 (34-66)||(41763045-41763077)
[»] chr7 (36 HSPs)
chr7 (35-81)||(43653169-43653215)
chr7 (34-75)||(14594000-14594041)
chr7 (34-75)||(16013523-16013564)
chr7 (33-73)||(20899418-20899458)
chr7 (34-69)||(6263507-6263542)
chr7 (34-73)||(12841270-12841309)
chr7 (34-73)||(28208323-28208362)
chr7 (34-73)||(29650632-29650671)
chr7 (34-73)||(31005453-31005492)
chr7 (34-73)||(31682597-31682636)
chr7 (34-73)||(32631812-32631851)
chr7 (34-73)||(35725566-35725605)
chr7 (34-73)||(43491556-43491595)
chr7 (34-73)||(44855169-44855208)
chr7 (34-73)||(47413710-47413749)
chr7 (35-73)||(12966265-12966303)
chr7 (35-73)||(38900205-38900243)
chr7 (34-72)||(39906368-39906406)
chr7 (34-72)||(43423987-43424025)
chr7 (34-71)||(2885719-2885756)
chr7 (34-71)||(11594208-11594245)
chr7 (34-71)||(36101774-36101811)
chr7 (34-66)||(1011294-1011326)
chr7 (447-475)||(11843177-11843205)
chr7 (34-66)||(21244285-21244317)
chr7 (34-66)||(27649028-27649060)
chr7 (34-66)||(28355414-28355446)
chr7 (34-66)||(31869104-31869136)
chr7 (34-66)||(33650872-33650904)
chr7 (34-66)||(34745995-34746027)
chr7 (34-66)||(37618193-37618225)
chr7 (34-66)||(39738447-39738479)
chr7 (33-65)||(39812185-39812217)
chr7 (34-66)||(40979930-40979962)
chr7 (34-66)||(47652795-47652827)
chr7 (34-66)||(48735683-48735715)
[»] chr4 (41 HSPs)
chr4 (31-73)||(37488336-37488378)
chr4 (33-73)||(42293260-42293300)
chr4 (34-74)||(48174087-48174127)
chr4 (34-73)||(8286687-8286726)
chr4 (34-73)||(19154858-19154897)
chr4 (34-73)||(21528536-21528575)
chr4 (31-66)||(26357004-26357039)
chr4 (34-73)||(30634101-30634140)
chr4 (35-74)||(43434173-43434212)
chr4 (34-73)||(45209200-45209239)
chr4 (34-73)||(46153956-46153995)
chr4 (34-73)||(49454474-49454513)
chr4 (34-73)||(50238610-50238649)
chr4 (34-73)||(50238696-50238735)
chr4 (34-73)||(55007994-55008033)
chr4 (35-73)||(6957847-6957885)
chr4 (34-72)||(8327149-8327187)
chr4 (34-68)||(55388211-55388245)
chr4 (34-71)||(436477-436514)
chr4 (34-71)||(12494911-12494948)
chr4 (34-71)||(26772534-26772571)
chr4 (38-71)||(29283828-29283861)
chr4 (34-75)||(32633399-32633440)
chr4 (35-68)||(34585731-34585764)
chr4 (34-71)||(39100533-39100570)
chr4 (34-71)||(45184130-45184167)
chr4 (34-71)||(50869877-50869914)
chr4 (34-71)||(52569512-52569549)
chr4 (34-71)||(56130418-56130455)
chr4 (34-66)||(813166-813198)
chr4 (34-66)||(15665349-15665381)
chr4 (34-66)||(22420719-22420751)
chr4 (34-66)||(23906299-23906331)
chr4 (34-66)||(31959816-31959848)
chr4 (37-73)||(31961261-31961297)
chr4 (34-66)||(32479286-32479318)
chr4 (33-73)||(35585852-35585892)
chr4 (34-66)||(38789625-38789657)
chr4 (34-66)||(48622545-48622577)
chr4 (34-66)||(49416955-49416987)
chr4 (34-66)||(51978749-51978781)
[»] chr1 (30 HSPs)
chr1 (34-74)||(38758014-38758054)
chr1 (34-73)||(2914118-2914157)
chr1 (34-73)||(8809496-8809535)
chr1 (34-73)||(25979226-25979265)
chr1 (34-73)||(30202125-30202164)
chr1 (34-73)||(34444604-34444643)
chr1 (34-73)||(36402054-36402093)
chr1 (34-73)||(43481793-43481832)
chr1 (34-73)||(51602304-51602343)
chr1 (34-72)||(15086170-15086208)
chr1 (445-475)||(27092850-27092880)
chr1 (34-71)||(1210993-1211030)
chr1 (34-71)||(4707218-4707255)
chr1 (34-71)||(38807668-38807705)
chr1 (36-73)||(41017212-41017249)
chr1 (34-71)||(41560477-41560514)
chr1 (34-66)||(696518-696550)
chr1 (34-66)||(8796457-8796489)
chr1 (34-66)||(29577500-29577532)
chr1 (34-66)||(29975447-29975479)
chr1 (34-66)||(37462878-37462910)
chr1 (34-66)||(40568412-40568444)
chr1 (34-66)||(42337804-42337836)
chr1 (34-66)||(43028810-43028842)
chr1 (34-66)||(44941778-44941810)
chr1 (34-66)||(49347395-49347427)
chr1 (34-66)||(50806915-50806947)
chr1 (34-66)||(52292287-52292319)
chr1 (34-66)||(52561591-52561623)
chr1 (34-66)||(52921328-52921360)
[»] scaffold0168 (1 HSPs)
scaffold0168 (34-73)||(28884-28923)
[»] chr8 (26 HSPs)
chr8 (34-73)||(1064968-1065007)
chr8 (34-73)||(5205423-5205462)
chr8 (34-73)||(14742077-14742116)
chr8 (34-73)||(24837939-24837978)
chr8 (34-73)||(41031415-41031454)
chr8 (34-73)||(41031521-41031560)
chr8 (34-73)||(44047527-44047566)
chr8 (34-71)||(2027778-2027815)
chr8 (35-68)||(5030416-5030449)
chr8 (34-71)||(9842368-9842405)
chr8 (34-71)||(11523720-11523757)
chr8 (34-71)||(30198263-30198300)
chr8 (34-71)||(36545397-36545434)
chr8 (34-66)||(1928589-1928621)
chr8 (34-66)||(4061911-4061943)
chr8 (34-66)||(4213053-4213085)
chr8 (34-66)||(4558210-4558242)
chr8 (35-71)||(5908895-5908931)
chr8 (34-62)||(16351625-16351653)
chr8 (34-66)||(16918498-16918530)
chr8 (34-66)||(25473405-25473437)
chr8 (36-72)||(31716072-31716108)
chr8 (34-66)||(35324021-35324053)
chr8 (34-66)||(39651030-39651062)
chr8 (34-66)||(44529473-44529505)
chr8 (34-66)||(45419483-45419515)
[»] chr6 (5 HSPs)
chr6 (34-73)||(28085624-28085663)
chr6 (34-71)||(12890823-12890860)
chr6 (34-66)||(9707018-9707050)
chr6 (34-66)||(33730213-33730245)
chr6 (34-66)||(34934832-34934864)
[»] chr5 (22 HSPs)
chr5 (34-73)||(4496632-4496671)
chr5 (34-73)||(12492379-12492418)
chr5 (34-73)||(14665960-14665999)
chr5 (34-73)||(26884684-26884723)
chr5 (34-73)||(28976854-28976893)
chr5 (34-73)||(29929302-29929341)
chr5 (34-64)||(12006292-12006322)
chr5 (34-72)||(27800076-27800114)
chr5 (34-75)||(6859629-6859670)
chr5 (34-71)||(13606994-13607031)
chr5 (34-71)||(28411924-28411961)
chr5 (34-71)||(29816630-29816667)
chr5 (34-66)||(408496-408528)
chr5 (34-66)||(3000987-3001019)
chr5 (34-66)||(3302092-3302124)
chr5 (34-66)||(3442873-3442905)
chr5 (34-66)||(10989087-10989119)
chr5 (34-66)||(16913884-16913916)
chr5 (34-66)||(32489294-32489326)
chr5 (34-70)||(34190966-34191002)
chr5 (34-66)||(38132584-38132616)
chr5 (34-66)||(38684728-38684760)
[»] scaffold0018 (1 HSPs)
scaffold0018 (34-72)||(31716-31754)
[»] scaffold0157 (1 HSPs)
scaffold0157 (34-71)||(25529-25566)
[»] scaffold0024 (1 HSPs)
scaffold0024 (34-66)||(82966-82998)


Alignment Details
Target: chr3 (Bit Score: 443; Significance: 0; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 443; E-Value: 0
Query Start/End: Original strand, 17 - 475
Target Start/End: Original strand, 34878098 - 34878556
Alignment:
Q  17 cactcgtgttattgcagccccacttagtggaataaggcttggttgttgttattgttgatttatgtatccgagtaatttaattttttccgttattgctaat 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  34878098 cactcgtgttattgcagccccacttagtggaataaggcttggttgttgttattgttgatttatgtatccgagtaatttaattttttccgttattgctcat 34878197  T
Q  117 cagggggttaaaaagtgcgtgaatgaagtcggaattggatttatgatttcaccaaagtatcaccctgcaatgaagattgttaggcctgtaagaaagaagc 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34878198 cagggggttaaaaagtgcgtgaatgaagtcggaattggatttatgatgtcaccaaagtatcaccctgcaatgaagattgttaggcctgtaagaaagaagc 34878297  T
Q  217 tcaaagtaagaactgtattcaatatattgggtccaatgttaaacccagcacatgcgccttatgcagttgttggtgtatacacagaagacttggtaagttc 316  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  34878298 tcaaagtaagaactgtattcaatatattgggtccaatgttaaacccagcacaggcgccttatgcagttgttggtgtatacacagaagacttggtaagttc 34878397  T
Q  317 cattccatcactgataaatttattgatctaatcaagaaatgagaaaaatataagaaatctatttgttcatagcattttcttgtgaaagcagcctcatatt 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34878398 cattccatcactgataaatttattgatctaatcaagaaatgagaaaaatataagaaatctatttgttcatagcattttcttgtgaaagcagcctcatatt 34878497  T
Q  417 tgaagtaattgctttacattgaaaactcttaggctaaactgcacttctcgccccctatg 475  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  34878498 tgaagtaattgctttacattgaaaacttttaggctaaactgcacttctcgccccctatg 34878556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 31452995 - 31452956
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  31452995 ccccacttagtggaataaggcttggttgttgtttttgttg 31452956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 30797856 - 30797824
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    |||||||||||||||||||||||||||||||||    
T  30797856 ccccacttagtggaataaggcttggttgttgtt 30797824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 311343 - 311304
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  311343 ccccacttagtgggataaggcttggttgttgttgttgttg 311304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 5169080 - 5169119
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  5169080 ccccacttagtgggataaggcttggttgttgttgttgttg 5169119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 12096739 - 12096700
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  12096739 ccccacttagtgggataaggcttggttgttgttgttgttg 12096700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 35481176 - 35481215
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||| ||| ||||||||||||||||||||||||||    
T  35481176 ccccacttaatgggataaggcttggttgttgttattgttg 35481215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 36764933 - 36764972
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  36764933 ccccacttagtggtataaggcttggttgttgttgttgttg 36764972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 45374511 - 45374472
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  45374511 ccccacttagtgggataaggcttggttgttgttgttgttg 45374472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 66
Target Start/End: Original strand, 45468824 - 45468855
Alignment:
Q  35 cccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||||||||||||||||||||||    
T  45468824 cccacttagtggaataaggcttggttgttgtt 45468855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 47555366 - 47555327
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  47555366 ccccacttagtgggataaggcttggttgttgttgttgttg 47555327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 48508483 - 48508522
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  48508483 ccccacttagtgggataaggcttggttgttgttgttgttg 48508522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 53262389 - 53262428
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  53262389 ccccacttagtgggataaggcttggttgttgttgttgttg 53262428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 72
Target Start/End: Complemental strand, 45834634 - 45834596
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgtt 72  Q
    ||||||||||||| ||||||||||||||||||| |||||    
T  45834634 ccccacttagtgggataaggcttggttgttgttgttgtt 45834596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 2133646 - 2133609
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgt 71  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  2133646 ccccacttagtgggataaggcttggttgttgttgttgt 2133609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 73
Target Start/End: Complemental strand, 4660195 - 4660162
Alignment:
Q  40 ttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||||||||||||||||| ||||||    
T  4660195 ttagtggaataaggcttggttgttgttgttgttg 4660162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 66
Target Start/End: Complemental strand, 23610967 - 23610934
Alignment:
Q  33 gccccacttagtggaataaggcttggttgttgtt 66  Q
    |||||||||||||| |||||||||||||||||||    
T  23610967 gccccacttagtgggataaggcttggttgttgtt 23610934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 34067147 - 34067184
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgt 71  Q
    |||||| |||||||||||||||||||||||||| ||||    
T  34067147 ccccacgtagtggaataaggcttggttgttgttgttgt 34067184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 35701097 - 35701134
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgt 71  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  35701097 ccccacttagtgggataaggcttggttgttgttgttgt 35701134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 75
Target Start/End: Original strand, 43529294 - 43529335
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttgat 75  Q
    ||||||||||||| ||||||||||||||||||| ||| ||||    
T  43529294 ccccacttagtgggataaggcttggttgttgttgttgatgat 43529335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 48532206 - 48532243
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgt 71  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  48532206 ccccacttagtgggataaggcttggttgttgttgttgt 48532243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 15296155 - 15296187
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  15296155 ccccacttagtgggataaggcttggttgttgtt 15296187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 27192471 - 27192503
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  27192471 ccccacttagtgggataaggcttggttgttgtt 27192503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 31454259 - 31454227
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  31454259 ccccacttagtgggataaggcttggttgttgtt 31454227  T

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Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 31566195 - 31566163
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  31566195 ccccacttagtgggataaggcttggttgttgtt 31566163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 37083326 - 37083294
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  37083326 ccccacttagtgggataaggcttggttgttgtt 37083294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 39512791 - 39512823
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  39512791 ccccacttagtgggataaggcttggttgttgtt 39512823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 40106654 - 40106622
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  40106654 ccccacttagtgggataaggcttggttgttgtt 40106622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 41452792 - 41452756
Alignment:
Q  37 cacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||| |||||||||||||||||||| ||||||    
T  41452792 cacttagtgcaataaggcttggttgttgttgttgttg 41452756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 70
Target Start/End: Complemental strand, 44102990 - 44102954
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattg 70  Q
    ||||||||||| | |||||||||||||||||||||||    
T  44102990 ccccacttagtaggataaggcttggttgttgttattg 44102954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 45289125 - 45289093
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  45289125 ccccacttagtgggataaggcttggttgttgtt 45289093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 48259952 - 48259984
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  48259952 ccccacttagtgggataaggcttggttgttgtt 48259984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 52139048 - 52139080
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  52139048 ccccacttagtgggataaggcttggttgttgtt 52139080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 54128627 - 54128659
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  54128627 ccccacttagtgggataaggcttggttgttgtt 54128659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.00000000001; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 34 - 74
Target Start/End: Complemental strand, 15775879 - 15775839
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttga 74  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  15775879 ccccacttagtggaataaggcttggttgttgttgttgttga 15775839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 11992142 - 11992110
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    |||||||||||||||||||||||||||||||||    
T  11992142 ccccacttagtggaataaggcttggttgttgtt 11992110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 34 - 74
Target Start/End: Complemental strand, 43573164 - 43573124
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttga 74  Q
    ||||||||||||| ||||||||||||||||||| |||||||    
T  43573164 ccccacttagtgggataaggcttggttgttgttgttgttga 43573124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 227437 - 227476
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  227437 ccccacttagtgggataaggcttggttgttgttgttgttg 227476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 3635357 - 3635318
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  3635357 ccccacttagtgggataaggcttggttgttgttgttgttg 3635318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 12734948 - 12734987
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  12734948 ccccacttagtgggataaggcttggttgttgttgttgttg 12734987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 13188390 - 13188429
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  13188390 ccccacttagtgggataaggcttggttgttgttgttgttg 13188429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 17670716 - 17670755
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  17670716 ccccacttagtgggataaggcttggttgttgttgttgttg 17670755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 38328404 - 38328365
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  38328404 ccccacttagtgggataaggcttggttgttgttgttgttg 38328365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 39029835 - 39029874
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  39029835 ccccacttagtgggataaggcttggttgttgttcttgttg 39029874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 72
Target Start/End: Original strand, 30306280 - 30306318
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgtt 72  Q
    ||||||||||||| ||||||||||||||||||| |||||    
T  30306280 ccccacttagtgggataaggcttggttgttgttgttgtt 30306318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 72
Target Start/End: Original strand, 35643196 - 35643234
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgtt 72  Q
    ||||||||||||| ||||||||||||||||||| |||||    
T  35643196 ccccacttagtgggataaggcttggttgttgttgttgtt 35643234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 71
Target Start/End: Original strand, 42543482 - 42543520
Alignment:
Q  33 gccccacttagtggaataaggcttggttgttgttattgt 71  Q
    |||||||||||||| ||||||||||||||||||| ||||    
T  42543482 gccccacttagtgggataaggcttggttgttgttgttgt 42543520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 72
Target Start/End: Complemental strand, 44437755 - 44437717
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgtt 72  Q
    ||||||||||||| ||||||||||||||||||| |||||    
T  44437755 ccccacttagtgggataaggcttggttgttgttgttgtt 44437717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 1648112 - 1648149
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgt 71  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  1648112 ccccacttagtgggataaggcttggttgttgttgttgt 1648149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 4807843 - 4807880
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgt 71  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  4807843 ccccacttagtgggataaggcttggttgttgttgttgt 4807880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 7326194 - 7326157
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgt 71  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  7326194 ccccacttagtgggataaggcttggttgttgttgttgt 7326157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 9531634 - 9531597
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgt 71  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  9531634 ccccacttagtgggataaggcttggttgttgttgttgt 9531597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 75
Target Start/End: Complemental strand, 10403927 - 10403886
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttgat 75  Q
    ||||||||||||| ||||||||||||||||||| ||| ||||    
T  10403927 ccccacttagtgggataaggcttggttgttgttgttgatgat 10403886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 12489836 - 12489799
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgt 71  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  12489836 ccccacttagtgggataaggcttggttgttgttgttgt 12489799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 78
Target Start/End: Complemental strand, 12882076 - 12882035
Alignment:
Q  37 cacttagtggaataaggcttggttgttgttattgttgattta 78  Q
    |||||||||| ||||||||||||||||||| |||||| ||||    
T  12882076 cacttagtgggataaggcttggttgttgttgttgttgtttta 12882035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 14444917 - 14444954
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgt 71  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  14444917 ccccacttagtgggataaggcttggttgttgttgttgt 14444954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 25834926 - 25834963
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgt 71  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  25834926 ccccacttagtgggataaggcttggttgttgttgttgt 25834963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 75
Target Start/End: Original strand, 28508926 - 28508967
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttgat 75  Q
    ||||||||||||| ||||||||||||||||||| || |||||    
T  28508926 ccccacttagtgggataaggcttggttgttgttgtttttgat 28508967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 37520694 - 37520731
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgt 71  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  37520694 ccccacttagtgggataaggcttggttgttgttgttgt 37520731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 38429657 - 38429694
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgt 71  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  38429657 ccccacttagtgggataaggcttggttgttgttgttgt 38429694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 2073341 - 2073309
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  2073341 ccccacttagtgggataaggcttggttgttgtt 2073309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 2901994 - 2901962
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||||| |||||||||||||||||    
T  2901994 ccccacttagtggaaaaaggcttggttgttgtt 2901962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 3243687 - 3243655
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  3243687 ccccacttagtgggataaggcttggttgttgtt 3243655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 12474961 - 12474929
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  12474961 ccccacttagtgggataaggcttggttgttgtt 12474929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 12520096 - 12520064
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  12520096 ccccacttagtgggataaggcttggttgttgtt 12520064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 38452720 - 38452688
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  38452720 ccccacttagtgggataaggcttggttgttgtt 38452688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 41763077 - 41763045
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  41763077 ccccacttagtgggataaggcttggttgttgtt 41763045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000002; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 43653215 - 43653169
Alignment:
Q  35 cccacttagtggaataaggcttggttgttgttattgttgatttatgt 81  Q
    |||||||||||| |||||||||| |||||||||||||||| ||||||    
T  43653215 cccacttagtgggataaggcttgattgttgttattgttgaattatgt 43653169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 34 - 75
Target Start/End: Original strand, 14594000 - 14594041
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttgat 75  Q
    ||||||||||||| ||||||||||||||||||| ||||||||    
T  14594000 ccccacttagtgggataaggcttggttgttgttgttgttgat 14594041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 34 - 75
Target Start/End: Original strand, 16013523 - 16013564
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttgat 75  Q
    ||||||||||||| ||||||||||||||||||| ||||||||    
T  16013523 ccccacttagtgggataaggcttggttgttgttgttgttgat 16013564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 20899418 - 20899458
Alignment:
Q  33 gccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    |||||||||||||| ||||||||||||||||||| ||||||    
T  20899418 gccccacttagtgggataaggcttggttgttgttgttgttg 20899458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 69
Target Start/End: Original strand, 6263507 - 6263542
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttatt 69  Q
    ||||||||||||| ||||||||||||||||||||||    
T  6263507 ccccacttagtgggataaggcttggttgttgttatt 6263542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 12841309 - 12841270
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  12841309 ccccacttagtgggataaggcttggttgttgttgttgttg 12841270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 28208362 - 28208323
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  28208362 ccccacttagtgggataaggcttggttgttgttgttgttg 28208323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 29650632 - 29650671
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  29650632 ccccacttagtgggataaggcttggttgttgttgttgttg 29650671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 31005453 - 31005492
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  31005453 ccccacttagtgggataaggcttggttgttgttgttgttg 31005492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 31682636 - 31682597
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  31682636 ccccacttagtgggataaggcttggttgttgttgttgttg 31682597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 32631812 - 32631851
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  32631812 ccccacttagtgggataaggcttggttgttgttgttgttg 32631851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 35725605 - 35725566
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  35725605 ccccacttagtgggataaggcttggttgttgttgttgttg 35725566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 43491556 - 43491595
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  43491556 ccccacttagtgggataaggcttggttgttgttgttgttg 43491595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 44855208 - 44855169
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  44855208 ccccacttagtgggataaggcttggttgttgttgttgttg 44855169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 47413749 - 47413710
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  47413749 ccccacttagtgggataaggcttggttgttgttgttgttg 47413710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 73
Target Start/End: Original strand, 12966265 - 12966303
Alignment:
Q  35 cccacttagtggaataaggcttggttgttgttattgttg 73  Q
    |||||||||||| ||||||||||||||||||| ||||||    
T  12966265 cccacttagtgggataaggcttggttgttgttgttgttg 12966303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 73
Target Start/End: Original strand, 38900205 - 38900243
Alignment:
Q  35 cccacttagtggaataaggcttggttgttgttattgttg 73  Q
    |||||||||||| ||||||||||||||||||| ||||||    
T  38900205 cccacttagtgggataaggcttggttgttgttgttgttg 38900243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 72
Target Start/End: Complemental strand, 39906406 - 39906368
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgtt 72  Q
    ||||||||||||| ||||||||||||||||||| |||||    
T  39906406 ccccacttagtgggataaggcttggttgttgttgttgtt 39906368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 72
Target Start/End: Complemental strand, 43424025 - 43423987
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgtt 72  Q
    ||||||||||||| ||||||||||||||||||| |||||    
T  43424025 ccccacttagtgggataaggcttggttgttgttgttgtt 43423987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 2885756 - 2885719
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgt 71  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  2885756 ccccacttagtgggataaggcttggttgttgttgttgt 2885719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 11594208 - 11594245
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgt 71  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  11594208 ccccacttagtgggataaggcttggttgttgttgttgt 11594245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 36101811 - 36101774
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgt 71  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  36101811 ccccacttagtgggataaggcttggttgttgttgttgt 36101774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 1011294 - 1011326
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  1011294 ccccacttagtgggataaggcttggttgttgtt 1011326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 475
Target Start/End: Original strand, 11843177 - 11843205
Alignment:
Q  447 aggctaaactgcacttctcgccccctatg 475  Q
    |||||||||||||||||||||||||||||    
T  11843177 aggctaaactgcacttctcgccccctatg 11843205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 21244317 - 21244285
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  21244317 ccccacttagtgggataaggcttggttgttgtt 21244285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 27649028 - 27649060
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  27649028 ccccacttagtgggataaggcttggttgttgtt 27649060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 28355414 - 28355446
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  28355414 ccccacttagtgggataaggcttggttgttgtt 28355446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 31869136 - 31869104
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  31869136 ccccacttagtgggataaggcttggttgttgtt 31869104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 33650904 - 33650872
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  33650904 ccccacttagtgggataaggcttggttgttgtt 33650872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 34745995 - 34746027
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  34745995 ccccacttagtgggataaggcttggttgttgtt 34746027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 37618193 - 37618225
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  37618193 ccccacttagtgggataaggcttggttgttgtt 37618225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 39738479 - 39738447
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  39738479 ccccacttagtgggataaggcttggttgttgtt 39738447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 33 - 65
Target Start/End: Original strand, 39812185 - 39812217
Alignment:
Q  33 gccccacttagtggaataaggcttggttgttgt 65  Q
    |||||||||||||| ||||||||||||||||||    
T  39812185 gccccacttagtgggataaggcttggttgttgt 39812217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 40979962 - 40979930
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  40979962 ccccacttagtgggataaggcttggttgttgtt 40979930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 47652795 - 47652827
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  47652795 ccccacttagtgggataaggcttggttgttgtt 47652827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 48735715 - 48735683
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  48735715 ccccacttagtggcataaggcttggttgttgtt 48735683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 35; Significance: 0.0000000002; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 37488336 - 37488378
Alignment:
Q  31 cagccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    |||||||||||||||| ||||||||||||||||||| ||||||    
T  37488336 cagccccacttagtgggataaggcttggttgttgttgttgttg 37488378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 73
Target Start/End: Complemental strand, 42293300 - 42293260
Alignment:
Q  33 gccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    |||||||||||||||||||||| ||||||||||| ||||||    
T  42293300 gccccacttagtggaataaggcctggttgttgttgttgttg 42293260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 34 - 74
Target Start/End: Complemental strand, 48174127 - 48174087
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttga 74  Q
    ||||||||||||| ||||||||||||||||||| |||||||    
T  48174127 ccccacttagtgggataaggcttggttgttgttgttgttga 48174087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 8286687 - 8286726
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  8286687 ccccacttagtgggataaggcttggttgttgttgttgttg 8286726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 19154897 - 19154858
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  19154897 ccccacttagtgggataaggcttggttgttgttgttgttg 19154858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 21528536 - 21528575
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  21528536 ccccacttagtgggataaggcttggttgttgttgttgttg 21528575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 66
Target Start/End: Original strand, 26357004 - 26357039
Alignment:
Q  31 cagccccacttagtggaataaggcttggttgttgtt 66  Q
    |||||||||||||||| |||||||||||||||||||    
T  26357004 cagccccacttagtgggataaggcttggttgttgtt 26357039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 30634140 - 30634101
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  30634140 ccccacttagtgggataaggcttggttgttgttgttgttg 30634101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 74
Target Start/End: Original strand, 43434173 - 43434212
Alignment:
Q  35 cccacttagtggaataaggcttggttgttgttattgttga 74  Q
    |||||||||||| ||||||||||||||||||| |||||||    
T  43434173 cccacttagtgggataaggcttggttgttgttgttgttga 43434212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 45209239 - 45209200
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  45209239 ccccacttagtgggataaggcttggttgttgttgttgttg 45209200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 46153956 - 46153995
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  46153956 ccccacttagtgggataaggcttggttgttgttgttgttg 46153995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 49454513 - 49454474
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  49454513 ccccacttagtgggataaggcttggttgttgttgttgttg 49454474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 50238649 - 50238610
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  50238649 ccccacttagtgggataaggcttggttgttgttgttgttg 50238610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 50238735 - 50238696
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  50238735 ccccacttagtgggataaggcttggttgttgttgttgttg 50238696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 55007994 - 55008033
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  55007994 ccccacttagtgggataaggcttggttgttgttgttgttg 55008033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 73
Target Start/End: Original strand, 6957847 - 6957885
Alignment:
Q  35 cccacttagtggaataaggcttggttgttgttattgttg 73  Q
    |||||||||||| ||||||||||||||||||| ||||||    
T  6957847 cccacttagtgggataaggcttggttgttgttgttgttg 6957885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 72
Target Start/End: Original strand, 8327149 - 8327187
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgtt 72  Q
    ||||||||||||| ||||||||||||||||||| |||||    
T  8327149 ccccacttagtgggataaggcttggttgttgttgttgtt 8327187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 68
Target Start/End: Complemental strand, 55388245 - 55388211
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttat 68  Q
    ||||||||||||| |||||||||||||||||||||    
T  55388245 ccccacttagtgggataaggcttggttgttgttat 55388211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 436477 - 436514
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgt 71  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  436477 ccccacttagtgggataaggcttggttgttgttgttgt 436514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 12494911 - 12494948
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgt 71  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  12494911 ccccacttagtgggataaggcttggttgttgttgttgt 12494948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 26772571 - 26772534
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgt 71  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  26772571 ccccacttagtgggataaggcttggttgttgttgttgt 26772534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 29283861 - 29283828
Alignment:
Q  38 acttagtggaataaggcttggttgttgttattgt 71  Q
    ||||||||||||||||||||||||||||| ||||    
T  29283861 acttagtggaataaggcttggttgttgttgttgt 29283828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 75
Target Start/End: Complemental strand, 32633440 - 32633399
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttgat 75  Q
    ||||||||||||| | ||||||||||||||||| ||||||||    
T  32633440 ccccacttagtgggaaaaggcttggttgttgttgttgttgat 32633399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 68
Target Start/End: Original strand, 34585731 - 34585764
Alignment:
Q  35 cccacttagtggaataaggcttggttgttgttat 68  Q
    |||||||||||| |||||||||||||||||||||    
T  34585731 cccacttagtgggataaggcttggttgttgttat 34585764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 39100570 - 39100533
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgt 71  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  39100570 ccccacttagtgggataaggcttggttgttgttgttgt 39100533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 45184167 - 45184130
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgt 71  Q
    ||||||||||||| ||||||||| ||||||||||||||    
T  45184167 ccccacttagtgggataaggcttagttgttgttattgt 45184130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 50869914 - 50869877
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgt 71  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  50869914 ccccacttagtgggataaggcttggttgttgttgttgt 50869877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 52569549 - 52569512
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgt 71  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  52569549 ccccacttagtgggataaggcttggttgttgttgttgt 52569512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 56130418 - 56130455
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgt 71  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  56130418 ccccacttagtgggataaggcttggttgttgttgttgt 56130455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 813166 - 813198
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    |||| ||||||||||||||||||||||||||||    
T  813166 ccccgcttagtggaataaggcttggttgttgtt 813198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 15665349 - 15665381
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  15665349 ccccacttagtgggataaggcttggttgttgtt 15665381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 22420751 - 22420719
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  22420751 ccccacttagtgggataaggcttggttgttgtt 22420719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 23906331 - 23906299
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  23906331 ccccacttagtgggataaggcttggttgttgtt 23906299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 31959848 - 31959816
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  31959848 ccccacttagtgggataaggcttggttgttgtt 31959816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 31961297 - 31961261
Alignment:
Q  37 cacttagtggaataaggcttggttgttgttattgttg 73  Q
    |||||||||| ||||||||||||||||||| ||||||    
T  31961297 cacttagtgggataaggcttggttgttgttgttgttg 31961261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 32479286 - 32479318
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||||| |||||||||||||||||    
T  32479286 ccccacttagtggaaaaaggcttggttgttgtt 32479318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 35585852 - 35585892
Alignment:
Q  33 gccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    |||||| ||||||| ||||||||||||||||||| ||||||    
T  35585852 gccccatttagtgggataaggcttggttgttgttgttgttg 35585892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 38789657 - 38789625
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  38789657 ccccacttagtgggataaggcttggttgttgtt 38789625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 48622577 - 48622545
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  48622577 ccccacttagtgggataaggcttggttgttgtt 48622545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 49416955 - 49416987
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  49416955 ccccacttagtgggataaggcttggttgttgtt 49416987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 51978749 - 51978781
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||||||||||||| |||||||||    
T  51978749 ccccacttagtggaataaggcttcgttgttgtt 51978781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 33; Significance: 0.000000003; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 34 - 74
Target Start/End: Complemental strand, 38758054 - 38758014
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttga 74  Q
    ||||||||||||| ||||||||||||||||||| |||||||    
T  38758054 ccccacttagtgggataaggcttggttgttgttgttgttga 38758014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 2914157 - 2914118
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  2914157 ccccacttagtgggataaggcttggttgttgttgttgttg 2914118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 8809535 - 8809496
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  8809535 ccccacttagtgggataaggcttggttgttgttgttgttg 8809496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 25979265 - 25979226
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  25979265 ccccacttagtgggataaggcttggttgttgttgttgttg 25979226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 30202164 - 30202125
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  30202164 ccccacttagtgggataaggcttggttgttgttgttgttg 30202125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 34444604 - 34444643
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  34444604 ccccacttagtgggataaggcttggttgttgttgttgttg 34444643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 36402093 - 36402054
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    |||||||||||||| |||||||||||||||||| ||||||    
T  36402093 ccccacttagtggattaaggcttggttgttgttgttgttg 36402054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 43481832 - 43481793
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  43481832 ccccacttagtgggataaggcttggttgttgttgttgttg 43481793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 51602304 - 51602343
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  51602304 ccccacttagtgggataaggcttggttgttgttgttgttg 51602343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 72
Target Start/End: Original strand, 15086170 - 15086208
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgtt 72  Q
    ||||||||||||| ||||||||||||||||||| |||||    
T  15086170 ccccacttagtgggataaggcttggttgttgttgttgtt 15086208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 445 - 475
Target Start/End: Original strand, 27092850 - 27092880
Alignment:
Q  445 ttaggctaaactgcacttctcgccccctatg 475  Q
    |||||||||||||||||||||||||||||||    
T  27092850 ttaggctaaactgcacttctcgccccctatg 27092880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 1210993 - 1211030
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgt 71  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  1210993 ccccacttagtgggataaggcttggttgttgttgttgt 1211030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 4707255 - 4707218
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgt 71  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  4707255 ccccacttagtgggataaggcttggttgttgttgttgt 4707218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 38807705 - 38807668
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgt 71  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  38807705 ccccacttagtgggataaggcttggttgttgttgttgt 38807668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 41017249 - 41017212
Alignment:
Q  36 ccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||||||| ||||||||||||| ||||||    
T  41017249 ccacttagtggaataagacttggttgttgttgttgttg 41017212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 41560477 - 41560514
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgt 71  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  41560477 ccccacttagtgggataaggcttggttgttgttgttgt 41560514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 696518 - 696550
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  696518 ccccacttagtgggataaggcttggttgttgtt 696550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 8796457 - 8796489
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  8796457 ccccacttagtgggataaggcttggttgttgtt 8796489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 29577500 - 29577532
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  29577500 ccccacttagtgggataaggcttggttgttgtt 29577532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 29975447 - 29975479
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  29975447 ccccacttagtgggataaggcttggttgttgtt 29975479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 37462910 - 37462878
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  37462910 ccccacttagtgggataaggcttggttgttgtt 37462878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 40568444 - 40568412
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  40568444 ccccacttagtgggataaggcttggttgttgtt 40568412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 42337804 - 42337836
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  42337804 ccccacttagtgggataaggcttggttgttgtt 42337836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 43028842 - 43028810
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  43028842 ccccacttagtgggataaggcttggttgttgtt 43028810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 44941810 - 44941778
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  44941810 ccccacttagtgggataaggcttggttgttgtt 44941778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 49347427 - 49347395
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  49347427 ccccacttagtgggataaggcttggttgttgtt 49347395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 50806915 - 50806947
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||| |||||||||||||||||||||||||||    
T  50806915 ccccatttagtggaataaggcttggttgttgtt 50806947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 52292287 - 52292319
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  52292287 ccccacttagtgggataaggcttggttgttgtt 52292319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 52561623 - 52561591
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  52561623 ccccacttagtgggataaggcttggttgttgtt 52561591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 52921328 - 52921360
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  52921328 ccccacttagtgggataaggcttggttgttgtt 52921360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 28923 - 28884
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  28923 ccccacttagtgggataaggcttggttgttgttgttgttg 28884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 32; Significance: 0.00000001; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 1064968 - 1065007
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  1064968 ccccacttagtgggataaggcttggttgttgttgttgttg 1065007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 5205423 - 5205462
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||| ||||||||||||||||||||    
T  5205423 ccccacttagtgggataagacttggttgttgttattgttg 5205462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 14742116 - 14742077
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  14742116 ccccacttagtgggataaggcttggttgttgttgttgttg 14742077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 24837939 - 24837978
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  24837939 ccccacttagtgggataaggcttggttgttgttgttgttg 24837978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 41031454 - 41031415
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  41031454 ccccacttagtgggataaggcttggttgttgttgttgttg 41031415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 41031560 - 41031521
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  41031560 ccccacttagtgggataaggcttggttgttgttgttgttg 41031521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 44047566 - 44047527
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  44047566 ccccacttagtgggataaggcttggttgttgttgttgttg 44047527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 2027778 - 2027815
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgt 71  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  2027778 ccccacttagtgggataaggcttggttgttgttgttgt 2027815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 68
Target Start/End: Complemental strand, 5030449 - 5030416
Alignment:
Q  35 cccacttagtggaataaggcttggttgttgttat 68  Q
    |||||||||||| |||||||||||||||||||||    
T  5030449 cccacttagtgggataaggcttggttgttgttat 5030416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 9842368 - 9842405
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgt 71  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  9842368 ccccacttagtggcataaggcttggttgttgttgttgt 9842405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 11523757 - 11523720
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgt 71  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  11523757 ccccacttagtgggataaggcttggttgttgttgttgt 11523720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 30198300 - 30198263
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgt 71  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  30198300 ccccacttagtgggataaggcttggttgttgttgttgt 30198263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 36545397 - 36545434
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgt 71  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  36545397 ccccacttagtgggataaggcttggttgttgttgttgt 36545434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 1928621 - 1928589
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  1928621 ccccacttagtgggataaggcttggttgttgtt 1928589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 4061911 - 4061943
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||||| |||||||||||||||||    
T  4061911 ccccacttagtggaaaaaggcttggttgttgtt 4061943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 4213085 - 4213053
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||| |||||||||||||||||||||||    
T  4213085 ccccacttaatggaataaggcttggttgttgtt 4213053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 4558242 - 4558210
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  4558242 ccccacttagtgggataaggcttggttgttgtt 4558210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 5908895 - 5908931
Alignment:
Q  35 cccacttagtggaataaggcttggttgttgttattgt 71  Q
    |||| ||||||||||||||||||||||||||| ||||    
T  5908895 cccaattagtggaataaggcttggttgttgttgttgt 5908931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 62
Target Start/End: Original strand, 16351625 - 16351653
Alignment:
Q  34 ccccacttagtggaataaggcttggttgt 62  Q
    |||||||||||||||||||||||||||||    
T  16351625 ccccacttagtggaataaggcttggttgt 16351653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 16918530 - 16918498
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  16918530 ccccacttagtgggataaggcttggttgttgtt 16918498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 25473437 - 25473405
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  25473437 ccccacttagtgggataaggcttggttgttgtt 25473405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 72
Target Start/End: Original strand, 31716072 - 31716108
Alignment:
Q  36 ccacttagtggaataaggcttggttgttgttattgtt 72  Q
    ||||||||||| ||||||||||||||||||| |||||    
T  31716072 ccacttagtgggataaggcttggttgttgttgttgtt 31716108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 35324021 - 35324053
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  35324021 ccccacttagtgggataaggcttggttgttgtt 35324053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 39651062 - 39651030
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  39651062 ccccacttagtgggataaggcttggttgttgtt 39651030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 44529473 - 44529505
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  44529473 ccccacttagtgggataaggcttggttgttgtt 44529505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 45419483 - 45419515
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  45419483 ccccacttagtgggataaggcttggttgttgtt 45419515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 32; Significance: 0.00000001; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 28085624 - 28085663
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  28085624 ccccacttagtgggataaggcttggttgttgttgttgttg 28085663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 12890823 - 12890860
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgt 71  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  12890823 ccccacttagtgggataaggcttggttgttgttgttgt 12890860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 9707018 - 9707050
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  9707018 ccccacttagtgggataaggcttggttgttgtt 9707050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 33730213 - 33730245
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  33730213 ccccacttagtgggataaggcttggttgttgtt 33730245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 34934864 - 34934832
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  34934864 ccccacttagtgggataaggcttggttgttgtt 34934832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 32; Significance: 0.00000001; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 4496632 - 4496671
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  4496632 ccccacttagtgggataaggcttggttgttgttgttgttg 4496671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 12492418 - 12492379
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  12492418 ccccacttagtgggataaggcttggttgttgttgttgttg 12492379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 14665960 - 14665999
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  14665960 ccccacttagtgggataaggcttggttgttgttgttgttg 14665999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 26884723 - 26884684
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    |||||||||||||||||||||||| |||||||| ||||||    
T  26884723 ccccacttagtggaataaggcttgattgttgttgttgttg 26884684  T

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Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 28976893 - 28976854
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  28976893 ccccacttagtgggataaggcttggttgttgttgttgttg 28976854  T

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Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 29929302 - 29929341
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttg 73  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  29929302 ccccacttagtgggataaggcttggttgttgttgttgttg 29929341  T

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Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 64
Target Start/End: Complemental strand, 12006322 - 12006292
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttg 64  Q
    |||||||||||||||||||||||||||||||    
T  12006322 ccccacttagtggaataaggcttggttgttg 12006292  T

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Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 72
Target Start/End: Original strand, 27800076 - 27800114
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgtt 72  Q
    ||||||||||||| ||||||||||||||||||| |||||    
T  27800076 ccccacttagtgggataaggcttggttgttgtttttgtt 27800114  T

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Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 75
Target Start/End: Original strand, 6859629 - 6859670
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgttgat 75  Q
    ||||||||||||| |||||||||||| |||||| ||||||||    
T  6859629 ccccacttagtgggataaggcttggtagttgttgttgttgat 6859670  T

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Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 13607031 - 13606994
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgt 71  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  13607031 ccccacttagtgggataaggcttggttgttgttgttgt 13606994  T

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Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 28411924 - 28411961
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgt 71  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  28411924 ccccacttagtgggataaggcttggttgttgttgttgt 28411961  T

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Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 29816630 - 29816667
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgt 71  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  29816630 ccccacttagtgggataaggcttggttgttgttgttgt 29816667  T

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Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 408528 - 408496
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  408528 ccccacttagtgggataaggcttggttgttgtt 408496  T

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Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 3000987 - 3001019
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  3000987 ccccacttagtgggataaggcttggttgttgtt 3001019  T

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Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 3302092 - 3302124
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  3302092 ccccacttagtgggataaggcttggttgttgtt 3302124  T

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Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 3442905 - 3442873
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  3442905 ccccacttagtggcataaggcttggttgttgtt 3442873  T

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Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 10989119 - 10989087
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  10989119 ccccacttagtgggataaggcttggttgttgtt 10989087  T

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Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 16913916 - 16913884
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  16913916 ccccacttagtgggataaggcttggttgttgtt 16913884  T

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Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 32489294 - 32489326
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  32489294 ccccacttagtgggataaggcttggttgttgtt 32489326  T

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Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 70
Target Start/End: Complemental strand, 34191002 - 34190966
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattg 70  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  34191002 ccccacttagtgggataaggcttggttgttgtcattg 34190966  T

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Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 38132584 - 38132616
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||||||| |||||||||||||||||||    
T  38132584 ccccacttagtgggataaggcttggttgttgtt 38132616  T

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Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 38684728 - 38684760
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    |||||||||||||||||| ||||||||||||||    
T  38684728 ccccacttagtggaataaagcttggttgttgtt 38684760  T

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Target: scaffold0018 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 72
Target Start/End: Original strand, 31716 - 31754
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgtt 72  Q
    ||||||||||||| ||||||||||||||||||| |||||    
T  31716 ccccacttagtgggataaggcttggttgttgttgttgtt 31754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 25566 - 25529
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgttattgt 71  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  25566 ccccacttagtgggataaggcttggttgttgttgttgt 25529  T

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Target: scaffold0024 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 82966 - 82998
Alignment:
Q  34 ccccacttagtggaataaggcttggttgttgtt 66  Q
    ||||||||| |||||||||||||||||||||||    
T  82966 ccccacttaatggaataaggcttggttgttgtt 82998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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