View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16514_high_12 (Length: 307)
Name: NF16514_high_12
Description: NF16514
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16514_high_12 |
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Alignment Details
Target: chr1 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 61 - 299
Target Start/End: Original strand, 13350457 - 13350694
Alignment:
| Q |
61 |
ggttagtgattaattagtgatggagaaatgaattaatttggtgattagtgagggttcatttatatttggaggacaatgttttgattctcacgactagctg |
160 |
Q |
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| T |
13350457 |
ggttagtgattaattagtgatggagagatgaattaatttggtgattagtgagggttcatttatatttggaggacaatgttttgattctcacgactagctg |
13350556 |
T |
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| Q |
161 |
tattgtattggttgttattattcattgtgacattttcatagactatatcgctcatgatatttgtaaaataatgaattgaataaaatttataggcgggtat |
260 |
Q |
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| T |
13350557 |
tattgtattggttgttattattcattgtgacattttcatagactatatcgctcatgatatttgtaaaataat-aattgaataaaatttataggcgggtat |
13350655 |
T |
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| Q |
261 |
aactaatcattcttttaacgggatcgtaaatgttcattt |
299 |
Q |
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| T |
13350656 |
aactaatcattcttttaacgggatcgtaaatgttcattt |
13350694 |
T |
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