View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16514_low_14 (Length: 309)

Name: NF16514_low_14
Description: NF16514
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16514_low_14
NF16514_low_14
[»] chr7 (85 HSPs)
chr7 (1-250)||(22742718-22742962)
chr7 (1-250)||(24350910-24351154)
chr7 (1-248)||(28476005-28476245)
chr7 (1-234)||(35132747-35132965)
chr7 (1-240)||(1749220-1749442)
chr7 (10-223)||(30756894-30757103)
chr7 (10-178)||(34899682-34899846)
chr7 (10-241)||(42978397-42978626)
chr7 (1-126)||(41553503-41553628)
chr7 (1-126)||(41553848-41553973)
chr7 (1-126)||(41554193-41554318)
chr7 (10-223)||(47590121-47590327)
chr7 (1-130)||(48930676-48930791)
chr7 (42-248)||(5078502-5078702)
chr7 (10-178)||(37837533-37837697)
chr7 (23-241)||(13797020-13797233)
chr7 (10-195)||(9450212-9450393)
chr7 (14-124)||(5348671-5348777)
chr7 (1-124)||(24069463-24069587)
chr7 (10-130)||(39328865-39328987)
chr7 (1-130)||(3394368-3394496)
chr7 (14-124)||(40993085-40993194)
chr7 (10-124)||(48316887-48317000)
chr7 (26-215)||(11343615-11343799)
chr7 (10-124)||(48061326-48061438)
chr7 (13-223)||(12141386-12141592)
chr7 (16-223)||(19404838-19405038)
chr7 (150-223)||(22087124-22087197)
chr7 (10-100)||(19296797-19296886)
chr7 (10-124)||(26623865-26623978)
chr7 (26-127)||(21927824-21927924)
chr7 (1-127)||(969516-969645)
chr7 (10-124)||(45349874-45349991)
chr7 (10-175)||(39171665-39171828)
chr7 (1-104)||(4121752-4121856)
chr7 (8-71)||(45949636-45949700)
chr7 (10-73)||(8001621-8001684)
chr7 (6-63)||(5025013-5025071)
chr7 (267-309)||(17774320-17774362)
chr7 (10-124)||(24770157-24770262)
chr7 (42-130)||(26610852-26610939)
chr7 (29-71)||(33614852-33614894)
chr7 (1-112)||(38880647-38880759)
chr7 (30-71)||(772534-772575)
chr7 (1-66)||(3860925-3860990)
chr7 (267-308)||(18226098-18226139)
chr7 (1-125)||(25067986-25068106)
chr7 (15-124)||(25287266-25287374)
chr7 (20-69)||(33530440-33530489)
chr7 (1-66)||(44311860-44311925)
chr7 (2-62)||(1769247-1769307)
chr7 (5-68)||(14734005-14734069)
chr7 (35-71)||(21552442-21552478)
chr7 (80-120)||(26492295-26492335)
chr7 (16-124)||(27996991-27997098)
chr7 (10-112)||(39228930-39229031)
chr7 (5-68)||(43483694-43483758)
chr7 (20-71)||(2528373-2528424)
chr7 (154-241)||(4529868-4529955)
chr7 (1-64)||(6001998-6002061)
chr7 (20-71)||(9933938-9933989)
chr7 (19-112)||(11653794-11653886)
chr7 (5-63)||(13008629-13008688)
chr7 (144-195)||(19296713-19296764)
chr7 (5-63)||(28015456-28015515)
chr7 (267-309)||(36900787-36900830)
chr7 (35-130)||(49148193-49148286)
chr7 (5-67)||(49167021-49167083)
chr7 (267-309)||(12232042-12232084)
chr7 (267-309)||(31309427-31309469)
chr7 (1-35)||(32684674-32684708)
chr7 (10-60)||(38798747-38798797)
chr7 (267-309)||(42260714-42260756)
chr7 (267-309)||(44472852-44472894)
chr7 (1-35)||(46339060-46339094)
chr7 (10-68)||(46699993-46700051)
chr7 (267-309)||(46949696-46949738)
chr7 (196-250)||(48930607-48930660)
chr7 (30-71)||(33507696-33507737)
chr7 (49-124)||(4529982-4530054)
chr7 (269-309)||(12231041-12231081)
chr7 (1-37)||(32521964-32522000)
chr7 (92-120)||(32522045-32522073)
chr7 (29-69)||(33614955-33614995)
chr7 (149-181)||(39228864-39228896)
[»] chr5 (71 HSPs)
chr5 (1-250)||(39567073-39567317)
chr5 (6-225)||(2979384-2979598)
chr5 (1-250)||(14211011-14211242)
chr5 (1-247)||(28540979-28541214)
chr5 (1-130)||(19103540-19103668)
chr5 (10-223)||(38597602-38597810)
chr5 (10-223)||(9113800-9114009)
chr5 (10-241)||(38007144-38007371)
chr5 (10-223)||(13007033-13007242)
chr5 (1-223)||(10332617-10332836)
chr5 (13-178)||(8096575-8096735)
chr5 (18-130)||(11977018-11977131)
chr5 (10-223)||(6012213-6012422)
chr5 (13-124)||(6216799-6216909)
chr5 (17-124)||(24229866-24229973)
chr5 (1-124)||(8088280-8088401)
chr5 (13-195)||(31391831-31392013)
chr5 (15-124)||(14726541-14726650)
chr5 (10-124)||(26825331-26825443)
chr5 (48-223)||(34945226-34945396)
chr5 (5-71)||(6647869-6647936)
chr5 (1-120)||(34881642-34881760)
chr5 (5-71)||(41358130-41358197)
chr5 (1-67)||(35921065-35921131)
chr5 (10-63)||(35850759-35850812)
chr5 (146-186)||(7930036-7930076)
chr5 (10-130)||(11073975-11074094)
chr5 (1-64)||(1582160-1582223)
chr5 (1-64)||(1602592-1602655)
chr5 (5-71)||(13007783-13007850)
chr5 (79-126)||(15571384-15571431)
chr5 (5-63)||(20270813-20270872)
chr5 (20-71)||(22397520-22397571)
chr5 (5-63)||(33486525-33486584)
chr5 (20-71)||(34866518-34866569)
chr5 (267-309)||(6834515-6834557)
chr5 (267-309)||(11156978-11157020)
chr5 (5-70)||(20146172-20146238)
chr5 (10-59)||(25980122-25980171)
chr5 (1-38)||(31802508-31802545)
chr5 (1-38)||(38111017-38111054)
chr5 (20-68)||(8812123-8812171)
chr5 (80-124)||(26878223-26878267)
chr5 (78-126)||(41214762-41214810)
chr5 (1-37)||(42886484-42886520)
chr5 (5-71)||(6887134-6887201)
chr5 (1-123)||(9267692-9267815)
chr5 (20-71)||(13079236-13079287)
chr5 (20-71)||(13080244-13080295)
chr5 (5-71)||(15710633-15710700)
chr5 (166-241)||(19103810-19103884)
chr5 (26-130)||(28386833-28386932)
chr5 (5-63)||(41554586-41554645)
chr5 (267-309)||(5382430-5382472)
chr5 (267-309)||(6809515-6809557)
chr5 (4-38)||(9591034-9591068)
chr5 (1-35)||(10649652-10649686)
chr5 (267-309)||(11158043-11158085)
chr5 (1-39)||(19349678-19349716)
chr5 (267-309)||(21362540-21362582)
chr5 (267-309)||(27188760-27188802)
chr5 (1-35)||(36344528-36344562)
chr5 (6-71)||(37425087-37425153)
chr5 (267-309)||(38091439-38091481)
chr5 (267-309)||(38483723-38483765)
chr5 (1-35)||(41184477-41184511)
chr5 (80-124)||(7036128-7036172)
chr5 (35-124)||(8985027-8985122)
chr5 (269-309)||(26394932-26394972)
chr5 (269-309)||(27500957-27500997)
chr5 (5-68)||(40565111-40565175)
[»] chr3 (84 HSPs)
chr3 (1-250)||(8914482-8914727)
chr3 (1-250)||(21289887-21290130)
chr3 (1-250)||(16235198-16235441)
chr3 (1-223)||(7546415-7546629)
chr3 (1-250)||(51303716-51303949)
chr3 (1-250)||(42460521-42460765)
chr3 (1-115)||(27706299-27706412)
chr3 (1-220)||(35175205-35175423)
chr3 (1-126)||(51486999-51487125)
chr3 (1-124)||(12947343-12947469)
chr3 (10-223)||(21431430-21431638)
chr3 (10-124)||(36461506-36461619)
chr3 (1-124)||(53508121-53508244)
chr3 (1-130)||(51923624-51923742)
chr3 (10-130)||(47042124-47042246)
chr3 (10-186)||(6954771-6954943)
chr3 (42-223)||(50194390-50194567)
chr3 (10-223)||(40487130-40487338)
chr3 (10-124)||(47896052-47896165)
chr3 (10-223)||(10232875-10233083)
chr3 (10-223)||(9998271-9998480)
chr3 (1-112)||(29239250-29239362)
chr3 (21-124)||(54148889-54148993)
chr3 (20-127)||(27856076-27856183)
chr3 (29-223)||(29921857-29922048)
chr3 (29-223)||(29971010-29971201)
chr3 (10-124)||(10108137-10108249)
chr3 (13-124)||(48650812-48650922)
chr3 (10-124)||(43488665-43488778)
chr3 (10-124)||(35865007-35865122)
chr3 (12-124)||(38860197-38860307)
chr3 (6-66)||(4019691-4019752)
chr3 (1-74)||(41818158-41818231)
chr3 (10-168)||(52923192-52923345)
chr3 (5-71)||(22844143-22844210)
chr3 (10-124)||(36910716-36910829)
chr3 (1-112)||(53807926-53808042)
chr3 (10-130)||(20465045-20465164)
chr3 (10-195)||(40556544-40556725)
chr3 (10-178)||(9797609-9797769)
chr3 (10-124)||(10229377-10229489)
chr3 (10-124)||(45568520-45568632)
chr3 (7-124)||(1649320-1649433)
chr3 (166-234)||(51923542-51923610)
chr3 (10-130)||(9319951-9320070)
chr3 (10-247)||(21533884-21534116)
chr3 (13-129)||(31271885-31272000)
chr3 (17-71)||(36540642-36540696)
chr3 (10-124)||(12050723-12050835)
chr3 (49-124)||(20987913-20987987)
chr3 (10-63)||(38545759-38545812)
chr3 (10-241)||(43016642-43016868)
chr3 (47-116)||(52116119-52116191)
chr3 (151-247)||(629118-629214)
chr3 (80-241)||(33579655-33579812)
chr3 (3-58)||(3606738-3606793)
chr3 (5-71)||(25939435-25939502)
chr3 (1-35)||(12116101-12116135)
chr3 (150-247)||(29249024-29249122)
chr3 (267-309)||(32750713-32750755)
chr3 (267-309)||(40514960-40515002)
chr3 (2-67)||(32246400-32246465)
chr3 (26-71)||(53426889-53426934)
chr3 (5-68)||(913272-913336)
chr3 (13-124)||(20608977-20609078)
chr3 (151-251)||(22290715-22290814)
chr3 (1-37)||(36734729-36734765)
chr3 (10-116)||(44960027-44960132)
chr3 (5-71)||(39340290-39340357)
chr3 (20-71)||(50460282-50460333)
chr3 (267-309)||(1033853-1033895)
chr3 (1-35)||(25162439-25162473)
chr3 (1-35)||(35499235-35499269)
chr3 (1-35)||(36906125-36906159)
chr3 (1-35)||(42719520-42719554)
chr3 (1-35)||(49552261-49552295)
chr3 (267-309)||(54800095-54800137)
chr3 (143-212)||(4821623-4821692)
chr3 (144-200)||(22844027-22844083)
chr3 (1-65)||(25461070-25461134)
chr3 (1-37)||(26739426-26739462)
chr3 (1-37)||(31794072-31794108)
chr3 (269-309)||(37280385-37280425)
chr3 (269-309)||(39285420-39285460)
[»] chr6 (51 HSPs)
chr6 (1-251)||(14801598-14801844)
chr6 (1-248)||(8102498-8102743)
chr6 (1-216)||(545838-546047)
chr6 (1-186)||(30776509-30776689)
chr6 (1-250)||(1523187-1523425)
chr6 (80-247)||(14800989-14801152)
chr6 (10-223)||(33053243-33053452)
chr6 (1-222)||(30493341-30493553)
chr6 (17-178)||(34018411-34018568)
chr6 (16-178)||(3913655-3913813)
chr6 (5-218)||(32191801-32192011)
chr6 (10-110)||(7976255-7976355)
chr6 (10-130)||(32059803-32059924)
chr6 (10-124)||(32327292-32327405)
chr6 (10-220)||(606013-606219)
chr6 (1-112)||(1933761-1933874)
chr6 (10-223)||(23128424-23128633)
chr6 (1-204)||(28981004-28981198)
chr6 (42-195)||(12170329-12170478)
chr6 (17-112)||(127584-127678)
chr6 (10-124)||(30608589-30608702)
chr6 (1-130)||(528419-528546)
chr6 (10-124)||(7515277-7515389)
chr6 (35-71)||(31804339-31804375)
chr6 (10-223)||(68076-68284)
chr6 (5-63)||(10744682-10744741)
chr6 (267-309)||(3788778-3788820)
chr6 (150-220)||(7976376-7976445)
chr6 (1-38)||(22571458-22571495)
chr6 (1-66)||(25398538-25398603)
chr6 (1-37)||(8266646-8266682)
chr6 (26-124)||(11321560-11321657)
chr6 (19-63)||(31852272-31852316)
chr6 (1-37)||(33543657-33543693)
chr6 (6-124)||(679006-679125)
chr6 (9-71)||(8644336-8644399)
chr6 (192-247)||(27097863-27097918)
chr6 (6-63)||(5417155-5417213)
chr6 (1-35)||(7881139-7881173)
chr6 (1-35)||(8028155-8028189)
chr6 (1-35)||(8196444-8196478)
chr6 (10-63)||(15128114-15128168)
chr6 (267-309)||(16895199-16895241)
chr6 (1-35)||(23947355-23947389)
chr6 (1-35)||(25064242-25064276)
chr6 (2-67)||(27097683-27097749)
chr6 (83-124)||(24227858-24227899)
chr6 (10-90)||(29319953-29320033)
chr6 (92-120)||(13436717-13436745)
chr6 (144-184)||(30608718-30608757)
chr6 (1-37)||(34489254-34489290)
[»] chr8 (84 HSPs)
chr8 (1-250)||(18890770-18891013)
chr8 (1-250)||(41896290-41896535)
chr8 (7-240)||(14585492-14585718)
chr8 (1-248)||(24099322-24099567)
chr8 (1-247)||(1239463-1239709)
chr8 (1-87)||(39657387-39657472)
chr8 (10-124)||(7883314-7883426)
chr8 (1-121)||(3240282-3240402)
chr8 (1-63)||(1236763-1236825)
chr8 (1-223)||(15344113-15344331)
chr8 (1-223)||(15433178-15433396)
chr8 (1-223)||(15524482-15524700)
chr8 (13-124)||(20559820-20559932)
chr8 (13-124)||(20571382-20571494)
chr8 (15-124)||(27498442-27498550)
chr8 (17-215)||(40619153-40619345)
chr8 (5-71)||(5917698-5917765)
chr8 (2-130)||(8443579-8443713)
chr8 (5-71)||(15827101-15827168)
chr8 (8-204)||(8826034-8826227)
chr8 (10-130)||(20553314-20553438)
chr8 (164-250)||(39655291-39655377)
chr8 (10-124)||(23230547-23230659)
chr8 (10-178)||(37971144-37971299)
chr8 (10-130)||(45445884-45446004)
chr8 (146-223)||(8981004-8981081)
chr8 (16-224)||(7677362-7677563)
chr8 (10-181)||(25191140-25191306)
chr8 (20-71)||(10042863-10042914)
chr8 (5-71)||(12244172-12244239)
chr8 (5-63)||(12248670-12248729)
chr8 (5-59)||(27534368-27534423)
chr8 (144-223)||(31013774-31013853)
chr8 (1-124)||(43834064-43834186)
chr8 (267-309)||(25849-25891)
chr8 (76-130)||(5046646-5046700)
chr8 (1-107)||(5333346-5333451)
chr8 (5-78)||(23766823-23766897)
chr8 (80-130)||(33214774-33214824)
chr8 (1-63)||(39646254-39646316)
chr8 (20-124)||(40211385-40211491)
chr8 (1-66)||(20227347-20227412)
chr8 (30-71)||(37719942-37719983)
chr8 (143-247)||(1236895-1236999)
chr8 (151-223)||(8867636-8867708)
chr8 (11-71)||(14919356-14919416)
chr8 (5-68)||(18190800-18190864)
chr8 (80-120)||(26469339-26469379)
chr8 (144-223)||(3673253-3673331)
chr8 (20-71)||(13977493-13977544)
chr8 (5-71)||(15665630-15665697)
chr8 (5-71)||(16938227-16938294)
chr8 (1-120)||(32724518-32724636)
chr8 (4-47)||(34493041-34493084)
chr8 (1-64)||(34609792-34609855)
chr8 (1-35)||(4808977-4809011)
chr8 (1-35)||(9498636-9498670)
chr8 (1-35)||(9619394-9619428)
chr8 (1-35)||(11196902-11196936)
chr8 (1-35)||(11464184-11464218)
chr8 (6-71)||(12356910-12356976)
chr8 (267-309)||(15730530-15730572)
chr8 (267-309)||(21558793-21558835)
chr8 (267-309)||(25616882-25616924)
chr8 (1-35)||(34611817-34611851)
chr8 (1-35)||(43192383-43192417)
chr8 (1-35)||(44099971-44100005)
chr8 (268-309)||(26939-26980)
chr8 (43-124)||(6831492-6831580)
chr8 (10-63)||(10377652-10377705)
chr8 (2-35)||(19876224-19876257)
chr8 (79-124)||(27110605-27110650)
chr8 (2-35)||(28239846-28239879)
chr8 (1-38)||(29617341-29617378)
chr8 (1-38)||(36532907-36532944)
chr8 (80-121)||(44414186-44414227)
chr8 (146-241)||(8412553-8412649)
chr8 (5-68)||(14327573-14327637)
chr8 (80-120)||(19876149-19876189)
chr8 (80-124)||(24186801-24186845)
chr8 (143-223)||(29617659-29617739)
chr8 (5-68)||(32256677-32256741)
chr8 (92-120)||(35580395-35580423)
chr8 (92-120)||(39153264-39153292)
[»] chr2 (102 HSPs)
chr2 (1-250)||(3308727-3308971)
chr2 (1-250)||(10237290-10237523)
chr2 (1-215)||(14955346-14955555)
chr2 (1-223)||(12647990-12648208)
chr2 (1-203)||(32448688-32448885)
chr2 (1-216)||(29574698-29574910)
chr2 (1-223)||(37994090-37994309)
chr2 (10-195)||(43397195-43397375)
chr2 (1-131)||(6358943-6359073)
chr2 (10-178)||(31788316-31788481)
chr2 (10-124)||(11985306-11985419)
chr2 (10-223)||(4098918-4099127)
chr2 (10-178)||(18763328-18763492)
chr2 (10-130)||(9169334-9169452)
chr2 (10-195)||(4778596-4778777)
chr2 (2-223)||(24461254-24461469)
chr2 (10-124)||(38445077-38445190)
chr2 (10-223)||(7646287-7646497)
chr2 (5-71)||(25623001-25623068)
chr2 (10-124)||(36943197-36943312)
chr2 (10-130)||(4041670-4041789)
chr2 (10-195)||(7448091-7448271)
chr2 (13-124)||(30400114-30400226)
chr2 (10-130)||(1415469-1415581)
chr2 (1-220)||(19597697-19597909)
chr2 (10-112)||(35220249-35220349)
chr2 (1-126)||(14423231-14423355)
chr2 (14-124)||(4264383-4264492)
chr2 (10-120)||(4904221-4904330)
chr2 (10-223)||(7677949-7678162)
chr2 (4-120)||(23933692-23933806)
chr2 (13-130)||(19062431-19062547)
chr2 (5-71)||(19580958-19581025)
chr2 (10-115)||(31210683-31210787)
chr2 (13-223)||(27097485-27097689)
chr2 (28-124)||(36691785-36691880)
chr2 (10-224)||(18107823-18108021)
chr2 (5-71)||(19953661-19953728)
chr2 (42-124)||(28871869-28871951)
chr2 (31-124)||(29279667-29279759)
chr2 (10-124)||(1421586-1421700)
chr2 (5-78)||(13268656-13268730)
chr2 (10-124)||(31128856-31128968)
chr2 (26-67)||(31269073-31269114)
chr2 (143-239)||(6436407-6436503)
chr2 (5-68)||(7443522-7443586)
chr2 (28-130)||(29173813-29173914)
chr2 (10-130)||(33923606-33923729)
chr2 (20-71)||(25237298-25237349)
chr2 (20-71)||(35353734-35353785)
chr2 (267-309)||(7275652-7275694)
chr2 (267-309)||(9758316-9758358)
chr2 (1-59)||(17249216-17249274)
chr2 (84-126)||(19596025-19596067)
chr2 (29-71)||(26491393-26491435)
chr2 (6-71)||(29812572-29812637)
chr2 (267-309)||(39939307-39939349)
chr2 (30-71)||(3397961-3398002)
chr2 (10-124)||(5427944-5428055)
chr2 (6-67)||(10929628-10929689)
chr2 (2-67)||(34128755-34128820)
chr2 (10-63)||(36323840-36323893)
chr2 (1-124)||(28227750-28227874)
chr2 (28-113)||(16375871-16375953)
chr2 (5-63)||(27024095-27024154)
chr2 (5-63)||(36508029-36508087)
chr2 (1-84)||(37416657-37416740)
chr2 (148-195)||(37876807-37876854)
chr2 (20-71)||(37883744-37883795)
chr2 (5-63)||(41842047-41842106)
chr2 (267-309)||(2694904-2694946)
chr2 (1-35)||(2808509-2808543)
chr2 (1-35)||(3725190-3725224)
chr2 (267-309)||(3910226-3910268)
chr2 (1-35)||(4228143-4228177)
chr2 (1-35)||(6173642-6173676)
chr2 (1-35)||(7015748-7015782)
chr2 (1-35)||(9986379-9986413)
chr2 (267-309)||(10315230-10315272)
chr2 (149-223)||(17149982-17150056)
chr2 (1-35)||(20047119-20047153)
chr2 (1-67)||(20145797-20145863)
chr2 (1-35)||(27249188-27249222)
chr2 (1-35)||(30420688-30420722)
chr2 (13-71)||(37876685-37876743)
chr2 (1-35)||(40659969-40660003)
chr2 (80-126)||(42714647-42714693)
chr2 (1-42)||(33140433-33140474)
chr2 (148-181)||(39311058-39311091)
chr2 (10-63)||(42698777-42698829)
chr2 (5-68)||(2251301-2251365)
chr2 (155-223)||(5428084-5428152)
chr2 (92-124)||(11833395-11833427)
chr2 (1-116)||(14416089-14416201)
chr2 (150-178)||(14423153-14423181)
chr2 (5-60)||(17068871-17068927)
chr2 (80-120)||(31581826-31581866)
chr2 (92-120)||(32913176-32913204)
chr2 (80-120)||(34598922-34598962)
chr2 (144-222)||(35220147-35220222)
chr2 (1-33)||(36234020-36234052)
chr2 (269-309)||(43130077-43130117)
[»] chr1 (87 HSPs)
chr1 (1-251)||(34413163-34413403)
chr1 (1-250)||(16161613-16161857)
chr1 (1-223)||(48749998-48750204)
chr1 (1-223)||(49626718-49626937)
chr1 (1-124)||(36775783-36775905)
chr1 (1-220)||(32679164-32679380)
chr1 (1-223)||(44543081-44543296)
chr1 (10-124)||(15836096-15836209)
chr1 (10-178)||(1742134-1742298)
chr1 (1-130)||(47132797-47132926)
chr1 (10-130)||(15434950-15435067)
chr1 (2-219)||(9341536-9341749)
chr1 (1-223)||(12634975-12635193)
chr1 (10-179)||(23291717-23291882)
chr1 (26-241)||(18939112-18939321)
chr1 (10-124)||(35462112-35462225)
chr1 (10-238)||(11462523-11462747)
chr1 (2-126)||(13075703-13075826)
chr1 (1-124)||(19060805-19060933)
chr1 (16-178)||(45415412-45415569)
chr1 (57-238)||(37720243-37720418)
chr1 (151-250)||(24012866-24012965)
chr1 (16-124)||(7337744-7337851)
chr1 (1-209)||(31692535-31692733)
chr1 (80-247)||(45789349-45789511)
chr1 (25-127)||(15492191-15492298)
chr1 (10-124)||(8211985-8212098)
chr1 (10-124)||(14872544-14872657)
chr1 (10-218)||(21686686-21686890)
chr1 (5-71)||(10877437-10877504)
chr1 (29-130)||(31984078-31984176)
chr1 (10-124)||(5983741-5983853)
chr1 (15-130)||(35484471-35484585)
chr1 (16-124)||(40163581-40163688)
chr1 (10-124)||(940268-940380)
chr1 (5-71)||(8893384-8893451)
chr1 (16-124)||(13144893-13145000)
chr1 (1-113)||(41994336-41994450)
chr1 (21-124)||(21947704-21947806)
chr1 (14-211)||(34878357-34878543)
chr1 (17-123)||(31317655-31317760)
chr1 (143-223)||(34528527-34528607)
chr1 (5-71)||(27469664-27469731)
chr1 (1-63)||(24582912-24582974)
chr1 (144-222)||(29738841-29738919)
chr1 (5-78)||(33703466-33703540)
chr1 (1-59)||(34528695-34528753)
chr1 (10-71)||(7836871-7836932)
chr1 (6-62)||(26199680-26199737)
chr1 (1-66)||(29837661-29837726)
chr1 (26-71)||(52839621-52839666)
chr1 (23-71)||(12148023-12148071)
chr1 (16-195)||(32394835-32395009)
chr1 (27-71)||(33177576-33177620)
chr1 (269-309)||(46584789-46584829)
chr1 (20-71)||(40488369-40488420)
chr1 (1-35)||(5701269-5701303)
chr1 (1-35)||(7997799-7997833)
chr1 (26-68)||(11121070-11121112)
chr1 (267-309)||(16834397-16834439)
chr1 (267-309)||(18053722-18053764)
chr1 (267-309)||(18542299-18542341)
chr1 (267-309)||(26615831-26615873)
chr1 (1-35)||(28035149-28035183)
chr1 (1-35)||(35584655-35584689)
chr1 (1-35)||(40881049-40881083)
chr1 (1-35)||(45426103-45426137)
chr1 (10-63)||(10776536-10776589)
chr1 (26-71)||(23039728-23039773)
chr1 (79-124)||(26535298-26535343)
chr1 (80-124)||(30506319-30506364)
chr1 (30-71)||(35077872-35077913)
chr1 (79-124)||(51916795-51916840)
chr1 (48-124)||(1602019-1602094)
chr1 (5-68)||(2350716-2350780)
chr1 (92-120)||(5701191-5701219)
chr1 (150-238)||(5983629-5983717)
chr1 (148-224)||(10776669-10776745)
chr1 (80-120)||(30818452-30818492)
chr1 (80-124)||(31918893-31918937)
chr1 (80-124)||(34479395-34479439)
chr1 (5-68)||(34566782-34566846)
chr1 (1-37)||(39927591-39927627)
chr1 (1-33)||(39987401-39987433)
chr1 (269-309)||(44744645-44744685)
chr1 (144-184)||(50377174-50377214)
chr1 (92-124)||(50377229-50377261)
[»] scaffold0888 (1 HSPs)
scaffold0888 (1-250)||(1751-1985)
[»] chr4 (113 HSPs)
chr4 (1-250)||(27651746-27651980)
chr4 (1-251)||(36194510-36194745)
chr4 (1-246)||(18935589-18935818)
chr4 (1-223)||(22300670-22300889)
chr4 (10-186)||(35348168-35348341)
chr4 (1-124)||(31891360-31891477)
chr4 (167-261)||(31891495-31891589)
chr4 (1-220)||(51888280-51888497)
chr4 (1-223)||(9643202-9643428)
chr4 (1-195)||(4142821-4143010)
chr4 (1-199)||(36161563-36161751)
chr4 (10-123)||(5119261-5119373)
chr4 (2-106)||(28857339-28857441)
chr4 (15-223)||(13633939-13634144)
chr4 (13-124)||(26633749-26633859)
chr4 (1-247)||(47320460-47320709)
chr4 (10-124)||(22611104-22611217)
chr4 (10-223)||(53810853-53811062)
chr4 (10-178)||(32766384-32766548)
chr4 (1-223)||(36204453-36204664)
chr4 (189-250)||(1621735-1621796)
chr4 (10-223)||(2520602-2520813)
chr4 (1-130)||(52944226-52944351)
chr4 (10-124)||(21686317-21686429)
chr4 (1-240)||(22038871-22039099)
chr4 (72-130)||(1621634-1621692)
chr4 (10-124)||(54021782-54021894)
chr4 (20-223)||(19853597-19853795)
chr4 (10-195)||(43510052-43510231)
chr4 (5-71)||(4959529-4959596)
chr4 (10-130)||(33920968-33921085)
chr4 (10-123)||(56040721-56040831)
chr4 (12-124)||(24099144-24099258)
chr4 (10-124)||(44596585-44596698)
chr4 (28-120)||(52978749-52978839)
chr4 (1-130)||(9713822-9713952)
chr4 (10-120)||(17949399-17949508)
chr4 (10-120)||(17953251-17953360)
chr4 (1-84)||(33332640-33332722)
chr4 (18-124)||(37030184-37030287)
chr4 (14-120)||(53444049-53444148)
chr4 (44-124)||(47158148-47158227)
chr4 (26-71)||(1657544-1657589)
chr4 (13-120)||(29961002-29961109)
chr4 (10-124)||(40066130-40066243)
chr4 (20-68)||(40859740-40859788)
chr4 (1-49)||(43853434-43853482)
chr4 (143-223)||(51535082-51535161)
chr4 (5-63)||(15729937-15729996)
chr4 (143-246)||(22063984-22064087)
chr4 (16-124)||(22558546-22558652)
chr4 (20-71)||(36804529-36804580)
chr4 (20-71)||(38434690-38434741)
chr4 (267-309)||(15031851-15031893)
chr4 (6-71)||(30416578-30416644)
chr4 (267-309)||(38575573-38575615)
chr4 (5-71)||(46775813-46775879)
chr4 (267-309)||(55082465-55082507)
chr4 (1-130)||(6155295-6155423)
chr4 (174-247)||(9713702-9713775)
chr4 (3-60)||(35395741-35395798)
chr4 (20-127)||(38166313-38166424)
chr4 (1-66)||(43353595-43353660)
chr4 (148-240)||(9178165-9178257)
chr4 (1-37)||(9645586-9645622)
chr4 (1-37)||(18138950-18138986)
chr4 (18-130)||(29120446-29120557)
chr4 (18-124)||(43095551-43095654)
chr4 (15-59)||(49072808-49072852)
chr4 (1-37)||(49126163-49126199)
chr4 (20-71)||(51646184-51646236)
chr4 (10-74)||(56156717-56156781)
chr4 (5-71)||(5388606-5388673)
chr4 (1-120)||(25273822-25273935)
chr4 (20-71)||(29589333-29589384)
chr4 (148-195)||(29961138-29961185)
chr4 (20-63)||(46728892-46728935)
chr4 (1-35)||(868180-868214)
chr4 (1-35)||(4643876-4643910)
chr4 (267-309)||(6335023-6335065)
chr4 (267-309)||(6335973-6336015)
chr4 (267-309)||(6644050-6644092)
chr4 (1-35)||(8009398-8009432)
chr4 (1-35)||(9528914-9528948)
chr4 (1-35)||(10389791-10389825)
chr4 (148-178)||(10496212-10496242)
chr4 (29-71)||(23926132-23926174)
chr4 (267-309)||(24318690-24318732)
chr4 (1-35)||(29965653-29965687)
chr4 (267-309)||(31559064-31559106)
chr4 (267-309)||(43419613-43419655)
chr4 (1-35)||(43444411-43444445)
chr4 (1-35)||(47417680-47417714)
chr4 (1-67)||(52934013-52934079)
chr4 (267-309)||(53139990-53140032)
chr4 (1-35)||(53616687-53616721)
chr4 (1-38)||(9145955-9145992)
chr4 (1-112)||(14121787-14121900)
chr4 (79-120)||(26091057-26091098)
chr4 (144-181)||(26091118-26091155)
chr4 (26-71)||(28588653-28588698)
chr4 (80-120)||(31381777-31381818)
chr4 (20-69)||(38546030-38546079)
chr4 (49-124)||(45418447-45418521)
chr4 (269-309)||(1565969-1566009)
chr4 (1-37)||(2624512-2624548)
chr4 (80-120)||(8009466-8009506)
chr4 (80-120)||(8670399-8670439)
chr4 (28-130)||(12199786-12199887)
chr4 (5-72)||(32189070-32189138)
chr4 (80-120)||(37188699-37188739)
chr4 (269-309)||(39633618-39633658)
chr4 (144-223)||(42032732-42032811)
[»] scaffold0603 (1 HSPs)
scaffold0603 (10-223)||(7522-7730)
[»] scaffold0009 (1 HSPs)
scaffold0009 (26-223)||(58170-58363)
[»] scaffold0445 (1 HSPs)
scaffold0445 (10-223)||(1149-1358)
[»] scaffold0017 (1 HSPs)
scaffold0017 (10-178)||(32822-32987)
[»] scaffold0039 (1 HSPs)
scaffold0039 (3-124)||(93000-93124)
[»] scaffold0088 (1 HSPs)
scaffold0088 (29-186)||(50628-50781)
[»] scaffold0136 (2 HSPs)
scaffold0136 (10-124)||(10117-10229)
scaffold0136 (29-130)||(37941-38040)
[»] scaffold0127 (1 HSPs)
scaffold0127 (10-241)||(15279-15505)
[»] scaffold0026 (1 HSPs)
scaffold0026 (14-223)||(71943-72148)
[»] scaffold0492 (1 HSPs)
scaffold0492 (39-124)||(12816-12900)
[»] scaffold0347 (1 HSPs)
scaffold0347 (1-63)||(5988-6050)
[»] scaffold0064 (1 HSPs)
scaffold0064 (143-250)||(19241-19346)
[»] scaffold0262 (1 HSPs)
scaffold0262 (49-124)||(1933-2006)
[»] scaffold0884 (1 HSPs)
scaffold0884 (10-124)||(2048-2159)
[»] scaffold0018 (1 HSPs)
scaffold0018 (5-71)||(137014-137081)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-35)||(361836-361870)
[»] scaffold0340 (1 HSPs)
scaffold0340 (41-78)||(11771-11808)
[»] scaffold0121 (1 HSPs)
scaffold0121 (79-124)||(31413-31458)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-38)||(36724-36761)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-37)||(453936-453972)


Alignment Details
Target: chr7 (Bit Score: 149; Significance: 1e-78; HSPs: 85)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 22742962 - 22742718
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaa 100  Q
    |||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  22742962 aaatcaaacaacgccgcacaagacgacgaacaacacaacgtcgaactaagacgacgaaatcacgaaa-aaaaacgaaagaaaaacttgatgtatgtgaaa 22742864  T
Q  101 atcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaa 200  Q
    |||||||||||| ||||||||||| |||||        ||| ||||||||||||||||| | ||||||||||||||||||| ||||  ||||||| ||||    
T  22742863 atcacttatttagattgaaagaaaggggaa----aaaagatgcagaggggtgattctagattaaaaattgacctaaaatcacccctcctcgatgaatgaa 22742768  T
Q  201 agaggaagaaaacttagagagaaaacaaagtttctctcactgaaaaatta 250  Q
    ||||||||||||||||||||||| ||| ||||||||||||| ||||||||    
T  22742767 agaggaagaaaacttagagagaatacatagtttctctcactaaaaaatta 22742718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 24350910 - 24351154
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaa 100  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  24350910 aaatcaaacaacgccgcacaagacgacgaacaacacaacgtcgcactaagacgacgaaatcactaaa-aaacacgaaagaaaaacttgatgtatgtgaaa 24351008  T
Q  101 atcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaa 200  Q
    |||||||||||| ||||||||||| |||||        ||| || |||||||||||||||||||||||||||||||||||| ||||  |||||||||||     
T  24351009 atcacttatttagattgaaagaaa-gggaa---aaaaggatgcacaggggtgattctaggtcaaaaattgacctaaaatcacccctcctcgatgagtgag 24351104  T
Q  201 agaggaagaaaacttagagagaaaacaaagtttctctcactgaaaaatta 250  Q
    |||||||||||||||| |||||| ||| ||||||||||||| ||||||||    
T  24351105 agaggaagaaaacttaaagagaagacagagtttctctcactaaaaaatta 24351154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 28476245 - 28476005
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaa 100  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  28476245 aaatcaaacaacgccgcacaagacgacgaacaacacaacgtcgcactaagacgacgaaatcacgaaa-aaacacaaaagaaaaacttgatgtatgtgaaa 28476147  T
Q  101 atcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaa 200  Q
    |||||||||||| ||||||||||| | |||         |||  | ||||||||||||||||||||||||||||||||||| ||||  |||||  |||||    
T  28476146 atcacttatttagattgaaagaaaggagaa-----aaaaata-tgcggggtgattctaggtcaaaaattgacctaaaatcacccctcctcgatatgtgaa 28476053  T
Q  201 agaggaagaaaacttagagagaaaacaaagtttctctcactgaaaaat 248  Q
    ||||||||||||||||||||||| | | ||||||||||||| ||||||    
T  28476052 agaggaagaaaacttagagagaataaagagtttctctcactaaaaaat 28476005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 35132965 - 35132747
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaa 100  Q
    |||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||           ||||||||||||||||||    
T  35132965 aaatcaaacaacgccgaacaagacgacgaacaacacaacgtcgcactaagacgacgaaatcacgaaagaaa-----------aacttgatgtatgtgaaa 35132877  T
Q  101 atcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaa 200  Q
    |||||||||||| ||| ||||||| |||||        |||  |||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||    
T  35132876 atcacttatttagattaaaagaaaggggaa----aaaagatgtagaggggtgattctaggtcaaaaattgacctaaaatcacccctcctcgatgagtgaa 35132781  T
Q  201 agaggaagaaaacttagagagaaaacaaagtttc 234  Q
    ||||||||||||||||||||||| ||| ||||||    
T  35132780 agaggaagaaaacttagagagaagacagagtttc 35132747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 1749220 - 1749442
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaa 100  Q
    ||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||           ||||||||||||||||||    
T  1749220 aaatcaaacaatgccgcacaagacgacgaacaacacaacgtcgcactaagacgacgaaatcacgaaagaaa-----------aacttgatgtatgtgaaa 1749308  T
Q  101 atcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaa 200  Q
    |||||||||||| ||||||||||| || ||        |||  || ||| ||||||||||||||||||||||||||||||| ||||  ||||||||||||    
T  1749309 atcacttatttagattgaaagaaagggaaa-----aaagatgaagcggg-tgattctaggtcaaaaattgacctaaaatcacccctcctcgatgagtgaa 1749402  T
Q  201 agaggaagaaaacttagagagaaaacaaagtttctctcac 240  Q
    ||||||||||||||||||||||| ||| ||  ||||||||    
T  1749403 agaggaagaaaacttagagagaagacagagggtctctcac 1749442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 10 - 223
Target Start/End: Original strand, 30756894 - 30757103
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||| ||||||||||||| | |||||| |||||||||||||||  || |||||| ||| ||||||| ||||  ||||||||||||||||    
T  30756894 aacgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcac--aaaaaacacaaaaggaaaaacatgatagatgtgaaaatcactta 30756991  T
Q  109 tttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaag 208  Q
    |||| ||||||||||| ||| |        |||  |||||||||||||||||||||||| | |||||||| || ||||  |||||||  ||||||| |||    
T  30756992 tttagattgaaagaaaagggga---aaaaagatgtagaggggtgattctaggtcaaaaaattacctaaaaccacccctcctcgatgaacgaaagagaaag 30757088  T
Q  209 aaaacttagagagaa 223  Q
    |||| ||||||||||    
T  30757089 aaaatttagagagaa 30757103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 10 - 178
Target Start/End: Original strand, 34899682 - 34899846
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||| ||||||||||||| | |||||| |||||||||||||||  || |||||| ||| ||||||||||||  ||||||||| ||||||    
T  34899682 aacgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcac--aaaaaacacaaaaggaaaaacttgatagatgtgaaaaccactta 34899779  T
Q  109 tttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaa 178  Q
    |||| ||||||||||| |||||        |||  |||||||||||||||||||||||| ||||||||||    
T  34899780 tttagattgaaagaaaagggaa---aaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaa 34899846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 241
Target Start/End: Complemental strand, 42978626 - 42978397
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||| ||||||||||||| | |||||| ||||||||||||||| |||| ||||| ||| ||||||||| || |||||||||| ||||||    
T  42978626 aacgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcacaaaag-aacacaaaaggaaaaactttatatatgtgaaaaccactta 42978528  T
Q  109 tttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaag 208  Q
    |||| |||||  |||| ||| ||       |||  |||| ||||||||||||||||||| |||||||||| || ||||  |||||||  ||| ||| |||    
T  42978527 tttagattgatcgaaaaggggag--aaaaagatgtagagtggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaag 42978430  T
Q  209 aaaacttagagagaaaacaaagtttctctcact 241  Q
    |||  ||||||||||   | |||||||||||||    
T  42978429 aaagtttagagagaagttagagtttctctcact 42978397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 41553503 - 41553628
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaa-acttgatgtatgtgaa 99  Q
    |||||||| |||| | |||||||| ||||||||||||| || ||||| || |||||||||||||||| |||||| |||||||| ||||||| |||||| |    
T  41553503 aaatcaaataacgtcacacaagacgacgaacaacacaacgttgcactcaggcgacgaaatcacgaaa-aaacacaaaagaaaacacttgatatatgtgga 41553601  T
Q  100 aatcacttatttaaattgaaagaaatg 126  Q
    |||| |||||||| |||||||||||||    
T  41553602 aatcccttatttagattgaaagaaatg 41553628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 41553848 - 41553973
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaa-acttgatgtatgtgaa 99  Q
    |||||||| |||| | |||||||| ||||||||||||| || ||||| || |||||||||||||||| |||||| |||||||| ||||||| |||||| |    
T  41553848 aaatcaaataacgtcacacaagacgacgaacaacacaacgttgcactcaggcgacgaaatcacgaaa-aaacacaaaagaaaacacttgatatatgtgga 41553946  T
Q  100 aatcacttatttaaattgaaagaaatg 126  Q
    |||| |||||||| |||||||||||||    
T  41553947 aatcccttatttagattgaaagaaatg 41553973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 41554193 - 41554318
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaa-acttgatgtatgtgaa 99  Q
    |||||||| |||| | |||||||| ||||||||||||| || ||||| || |||||||||||||||| |||||| |||||||| ||||||| |||||| |    
T  41554193 aaatcaaataacgtcacacaagacgacgaacaacacaacgttgcactcaggcgacgaaatcacgaaa-aaacacaaaagaaaacacttgatatatgtgga 41554291  T
Q  100 aatcacttatttaaattgaaagaaatg 126  Q
    |||| |||||||| |||||||||||||    
T  41554292 aatcccttatttagattgaaagaaatg 41554318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 10 - 223
Target Start/End: Complemental strand, 47590327 - 47590121
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||| ||||||||||||| | |||||| |||| ||||||||||  || |||||| ||| |||||||||||| |||||||||| ||||||    
T  47590327 aacgccgcacaagacgacgaacaacacaacgccgcacttagacaacgaaatcac--aaaaaacacaaaaggaaaaacttgatatatgtgaaaaccactta 47590230  T
Q  109 tttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaag 208  Q
    |||| ||||||||||  |||||         ||  |||||||||||||||| ||||||| ||||||||||||| ||||  || ||||  ||| ||| |||    
T  47590229 tttagattgaaagaatagggaa-----aaaaatgtagaggggtgattctagttcaaaaa-tgacctaaaatcacccctcctctatgaacgaatgagaaag 47590136  T
Q  209 aaaacttagagagaa 223  Q
    |||| ||||||||||    
T  47590135 aaaatttagagagaa 47590121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 48930791 - 48930676
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaa 100  Q
    |||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||| ||              |||||||||||||||||||||    
T  48930791 aaatcaaacaacgccgcacaagacgacgaataacacaacgtcgcactaagacgacgaaatcatga--------------aaaaacttgatgtatgtgaaa 48930706  T
Q  101 atcacttatttaaattgaaagaaatgggaa 130  Q
    |||||||||||| ||||||||||| |||||    
T  48930705 atcacttatttagattgaaagaaaggggaa 48930676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 42 - 248
Target Start/End: Original strand, 5078502 - 5078702
Alignment:
Q  42 cgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaaatcacttatttaaattgaaagaaatgggaagnnnnnnngat 141  Q
    |||||| ||| |||||||| |||||| |||||| ||||||||||||||| ||||| ||||||||||||||| || |||| || |||  ||       |||    
T  5078502 cgcacttagatgacgaaattacgaaa-aaacacaaaagaaaaacttgatatatgtaaaaatcacttatttagatcgaaataa-tggagagaaa----gat 5078595  T
Q  142 acagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaagaaaacttagagagaaaacaaagtttctctcact 241  Q
     ||||||||||||||||||||||||| ||||||||||||| || |  |  ||||||||||||  |||| |||||||||||||    ||||||||||||||    
T  5078596 gcagaggggtgattctaggtcaaaaaatgacctaaaatcacccttccttaatgagtgaaagataaagagaacttagagagaagttgaagtttctctcact 5078695  T
Q  242 gaaaaat 248  Q
     ||||||    
T  5078696 aaaaaat 5078702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 10 - 178
Target Start/End: Original strand, 37837533 - 37837697
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||| ||||||||||||| | |||||| ||| || |||||||| ||| |||||| |||| |||||||| || |||||| ||| ||||||    
T  37837533 aacgccgcacaagacgacgaacaacacaacgccgcacttagatgatgaaatcac-aaaaaaacacaaaagaaaaaacttaatatatgtgtaaaccactta 37837631  T
Q  109 tttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaa 178  Q
    |||| ||||||||||| |||||        |||  |||||||||||||||||||||||| ||||||||||    
T  37837632 tttagattgaaagaaaagggaa----aaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaa 37837697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 241
Target Start/End: Original strand, 13797020 - 13797233
Alignment:
Q  23 acaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcacttatttaaattgaaag 121  Q
    |||||||||||||||| | |||||| ||||||||||||||  |||  ||||| |||| |||||||||||  |||| ||||||||||||||||||||||||    
T  13797020 acaacgaacaacacaacgccgcacttagacgacgaaatcataaaa--aacacaaaaggaaaaacttgatagatgttaaaatcacttatttaaattgaaag 13797117  T
Q  122 aaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaagaaaacttagagag 221  Q
    ||| ||| |        |||  |||||||||||||||||| ||||| |||||||||| ||||| |  |||||||  ||| ||| ||||||| ||| ||||    
T  13797118 aaaagggga----aaaagatgtagaggggtgattctaggttaaaaaatgacctaaaaccatccatcctcgatgaacgaacgagaaagaaaatttaaagag 13797213  T
Q  222 aaaacaaagtttctctcact 241  Q
    ||    ||||||||||||||    
T  13797214 aagttgaagtttctctcact 13797233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 195
Target Start/End: Original strand, 9450212 - 9450393
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||| ||||||||||||| | | |||| |||||||||||||||  || |||||| ||| || ||||| |||  ||||||||||||||||    
T  9450212 aacgccgcacaagacgacgaacaacacaacgccacacttagacgacgaaatcac--aaaaaacacaaaaggagaaactagatagatgtgaaaatcactta 9450309  T
Q  109 tttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatga 195  Q
    |||| ||||||||||| ||| |        |||  ||| |||||||||||||||||||| |||||||||| |||||||  |||||||    
T  9450310 tttagattgaaagaaaagggga---aacaagatgtagatgggtgattctaggtcaaaaaatgacctaaaaccatccctcctcgatga 9450393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 124
Target Start/End: Original strand, 5348671 - 5348777
Alignment:
Q  14 ccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaaatcacttatttaa 113  Q
    |||||||| ||||||||||||||||||| ||||| ||||||||||||||| ||||   ||| || |||||||||||    ||||||||||||||||||||    
T  5348671 ccgcacaaaacaacgaacaacacaatgttgcactcagacgacgaaatcacaaaag---cac-aatgaaaaacttgaaacgtgtgaaaatcacttatttaa 5348766  T
Q  114 attgaaagaaa 124  Q
    |||||||||||    
T  5348767 attgaaagaaa 5348777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 24069463 - 24069587
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaa 99  Q
    |||||||| ||||||||||||||||||||||||||||| | |||||| |||||| |||||||||||| | |||| |||| |||||||| ||   |||| |    
T  24069463 aaatcaaaaaacgccgcacaagacaacgaacaacacaacgccgcactcagacgatgaaatcacgaaaaagacacaaaagaaaaaactttatacgtgtgga 24069562  T
Q  100 aatcacttatttaaattgaaagaaa 124  Q
    |||||||||| || || ||||||||    
T  24069563 aatcacttatatagatcgaaagaaa 24069587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 130
Target Start/End: Original strand, 39328865 - 39328987
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaa-acacgaaag-aaaaacttgatgtatgtgaaaatcactt 107  Q
    ||||||||||||||| ||||||||||||| | || ||| ||||||||||||||| ||| || | |  |||| ||||||||||| | |||||||| |||||    
T  39328865 aacgccgcacaagacgacgaacaacacaacgccgtacttagacgacgaaatcacaaaaaaagaaaaaaaagaaaaaacttgatatgtgtgaaaaccactt 39328964  T
Q  108 atttaaattgaaagaaatgggaa 130  Q
    ||||||||||||||||| |||||    
T  39328965 atttaaattgaaagaaaagggaa 39328987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 3394496 - 3394368
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaa 100  Q
    |||||||||||| || |||||||| |||||||||||||   |||||| |||||| |||||||||||  |||||| ||  |||||||| || || ||||||    
T  3394496 aaatcaaacaacaccacacaagacgacgaacaacacaacaccgcactcagacgatgaaatcacgaagaaaacac-aagaaaaaacttcatatacgtgaaa 3394398  T
Q  101 atcacttatttaaattgaaagaaatgggaa 130  Q
    |||||||||||| || |||||||| |||||    
T  3394397 atcacttatttagatcgaaagaaaggggaa 3394368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 124
Target Start/End: Complemental strand, 40993194 - 40993085
Alignment:
Q  14 ccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcacttattta 112  Q
    ||||||||||  ||||||||||||| | |||||| ||||||||||||||| |||  ||||| |||| |||||||||||  ||||||||| ||||||||||    
T  40993194 ccgcacaagatgacgaacaacacaacgccgcacttagacgacgaaatcacaaaa--aacacaaaaggaaaaacttgatagatgtgaaaaccacttattta 40993097  T
Q  113 aattgaaagaaa 124  Q
     |||||||||||    
T  40993096 gattgaaagaaa 40993085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 48316887 - 48317000
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||| ||||||||| ||||||||||||| | || ||| |||||||||||||||  || |||||| |||| ||||| |||||  ||||||||| ||||||    
T  48316887 aacgctgcacaagacgacgaacaacacaacgccgtacttagacgacgaaatcac--aaaaaacacaaaagaaaaaatttgatagatgtgaaaaccactta 48316984  T
Q  109 tttaaattgaaagaaa 124  Q
    ||||||||||||||||    
T  48316985 tttaaattgaaagaaa 48317000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 26 - 215
Target Start/End: Complemental strand, 11343799 - 11343615
Alignment:
Q  26 acgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaa-acttgatgtatg-tgaaaatcacttatttaaattgaaagaa 123  Q
    ||||||||||||| | |||||| |||| |||||||||||||| |||||| |||||||| | |||||  ||| | ||||||||||||||| ||||||||||    
T  11343799 acgaacaacacaacgccgcactcagacaacgaaatcacgaaa-aaacacaaaagaaaatatttgatagatgttaaaaatcacttatttagattgaaagaa 11343701  T
Q  124 atgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaagaaaactt 215  Q
    |||| ||         || || |||||||||||||||||||||| | | ||||||||| ||||  |||||||| ||||||| ||||||||||    
T  11343700 atggaaa-----aaaaatgca-aggggtgattctaggtcaaaaaataaactaaaatcaccccttctcgatgagcgaaagagaaagaaaactt 11343615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 48061438 - 48061326
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcactta 108  Q
    |||| |||| ||||| |||||||||| |||| |||||| |||||||||||||||   | |||||| |||| |||||||||||  ||||||||| ||||||    
T  48061438 aacgtcgcataagacgacgaacaacaaaatgccgcacttagacgacgaaatcac---aaaaacacaaaagaaaaaacttgatagatgtgaaaaccactta 48061342  T
Q  109 tttaaattgaaagaaa 124  Q
    |||| |||||||||||    
T  48061341 tttagattgaaagaaa 48061326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 223
Target Start/End: Original strand, 12141386 - 12141592
Alignment:
Q  13 gccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcacttattt 111  Q
    |||||||||||| || ||||||| || | |||||| |||||||||||||||   | |||||| |||| |||||||||||  ||||||||| |||||||||    
T  12141386 gccgcacaagacgacaaacaacaaaacgccgcacttagacgacgaaatcac---aaaaacacaaaagaaaaaacttgatagatgtgaaaaccacttattt 12141482  T
Q  112 aaattgaa--agaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaaga 209  Q
    | ||||||  | ||| |||||        |||  ||||||||||||||| |||||||| |||||||||| || |||| ||||||||  ||| ||| ||||    
T  12141483 agattgaaataaaaaagggaa----aaaagatgtagaggggtgattctatgtcaaaaaatgacctaaaaccacccctcttcgatgaacgaaggagaaaga 12141578  T
Q  210 aaacttagagagaa 223  Q
    ||  ||||||||||    
T  12141579 aagtttagagagaa 12141592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 223
Target Start/End: Original strand, 19404838 - 19405038
Alignment:
Q  16 gcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaaatcacttatttaaat 115  Q
    ||||||||| |||||||| | || | |||||| ||||||||||||||| |||  | ||  || |||||||||||| |||||||||| |||||||||| ||    
T  19404838 gcacaagacgacgaacaatagaacgccgcacttagacgacgaaatcactaaa--atcaa-aaggaaaaacttgatttatgtgaaaaccacttatttagat 19404934  T
Q  116 tgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaagaaaactt 215  Q
    ||||||||| || ||        |||  |||||||||||||||||||||||| |||||||||| || ||||  || |||| | || ||| ||||| | ||    
T  19404935 tgaaagaaaaggaaa----aaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccaccccttctcaatgaattaaggagaaagaagattt 19405030  T
Q  216 agagagaa 223  Q
    ||||||||    
T  19405031 agagagaa 19405038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 22087197 - 22087124
Alignment:
Q  150 gtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaagaaaacttagagagaa 223  Q
    |||||||||||||||||| ||||| |||| ||||||| |||||| | |||| ||| ||||||||||||||||||    
T  22087197 gtgattctaggtcaaaaaatgaccaaaaaccatccctcttcgataaatgaaggagaaagaaaacttagagagaa 22087124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 100
Target Start/End: Complemental strand, 19296886 - 19296797
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaa 100  Q
    ||||||||||||||| ||||||||||||| | |||||| |||||||||||||||  || |||||| ||| ||||||||||||  ||||||||    
T  19296886 aacgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcac--aaaaaacacaaaaggaaaaacttgatagatgtgaaa 19296797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 26623865 - 26623978
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||| ||||||| ||||||||||||| | |||||| |||||| ||||||||  || |||||  ||| |||||||||||| | |||| |||  |||||    
T  26623865 aacgccgtacaagacgacgaacaacacaacgccgcactcagacgatgaaatcac--aaaaaacataaaatgaaaaacttgatatgtgtgtaaacaactta 26623962  T
Q  109 tttaaattgaaagaaa 124  Q
    ||||||||||||||||    
T  26623963 tttaaattgaaagaaa 26623978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 127
Target Start/End: Original strand, 21927824 - 21927924
Alignment:
Q  26 acgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcacttatttaaattgaaagaaa 124  Q
    ||||||||||||| ||| |||| |||||| |||||||| |||  ||||| ||| ||||||||| ||  |||| |||| ||||||||||||||||||||||    
T  21927824 acgaacaacacaacgtcacactcagacgatgaaatcacaaaa--aacacaaaatgaaaaacttaatacatgtaaaaaccacttatttaaattgaaagaaa 21927921  T
Q  125 tgg 127  Q
    |||    
T  21927922 tgg 21927924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 969516 - 969645
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacga--aagaaacacgaaag-aaaaacttgatgtatgtg 97  Q
    |||||||||||||||||| ||||| ||||||||||||| | | || | | |||| ||||||||||  || ||| ||  ||| ||||||||  | ||||||    
T  969516 aaatcaaacaacgccgcaaaagacgacgaacaacacaacgccacattcaaacgatgaaatcacgaagaaaaaaaacacaagaaaaaacttattatatgtg 969615  T
Q  98 aaaatcacttatttaaattgaaagaaatgg 127  Q
    ||||||||||||||||||  ||||||||||    
T  969616 aaaatcacttatttaaatctaaagaaatgg 969645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 45349874 - 45349991
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcac--gaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcact 106  Q
    |||||| ||||| || ||||||||||||| | | |||| |||||||||||||||   ||| |||||| |||| |||||| || | || ||||||| ||||    
T  45349874 aacgccacacaaaacgacgaacaacacaacgccacacttagacgacgaaatcacagaaaaaaaacacaaaagaaaaaacctggtatacgtgaaaaccact 45349973  T
Q  107 tatttaaattgaaagaaa 124  Q
    ||||||||||||||||||    
T  45349974 tatttaaattgaaagaaa 45349991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 175
Target Start/End: Original strand, 39171665 - 39171828
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||| ||||||||| |||||||||| || |  ||||| ||| ||||||||||| ||| |||||| ||| ||||||||||||  || |||||| ||||||    
T  39171665 aacgctgcacaagacgacgaacaacaaaacgcagcacttagatgacgaaatcac-aaaaaaacacaaaaggaaaaacttgatagatatgaaaaccactta 39171763  T
Q  109 tttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgaccta 175  Q
    |||| || ||||||||  ||||        |||  |||||||||||||||||||||||| |||||||    
T  39171764 tttagatcgaaagaaaaaggaa--aaaaaagatgtagaggggtgattctaggtcaaaaaatgaccta 39171828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 4121752 - 4121856
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaa-cttgatgtatgtgaa 99  Q
    ||||||||||| | ||||||| |||  ||||||||||||| ||||   ||||||||||||||||||| ||| |  ||||||||| |||||| |||||| |    
T  4121752 aaatcaaacaatgtcgcacaatacagtgaacaacacaatgccgcatccagacgacgaaatcacgaaaaaaatataaaagaaaaagcttgatatatgtgga 4121851  T
Q  100 aatca 104  Q
    |||||    
T  4121852 aatca 4121856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 45949636 - 45949700
Alignment:
Q  8 acaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    |||||||||||||| ||| || ||||| ||||||||||||||| |||||||||||||| ||||||    
T  45949636 acaacgccgcacaaagacgacaaacaaaacaatgtcgcactaacacgacgaaatcacggaagaaa 45949700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 8001621 - 8001684
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaaca 73  Q
    ||||||||||||||| |||||||||| || | |||||| ||||||||||||||| |||| ||||    
T  8001621 aacgccgcacaagacgacgaacaacaaaacgccgcacttagacgacgaaatcacaaaaggaaca 8001684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 5025013 - 5025071
Alignment:
Q  6 aaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcac 63  Q
    |||||||| ||||||| ||| |||||||| |||| ||||||||||||||||||||||||    
T  5025013 aaacaacgtcgcacaaagacgacgaacaaaacaaggtcgcactaagacgacgaaatcac 5025071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 309
Target Start/End: Original strand, 17774320 - 17774362
Alignment:
Q  267 aagtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    |||||||||||| |||||||||| |||||||||||||||||||    
T  17774320 aagtttcgtcaattatcccctgaaattaacaaaacttcaatta 17774362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 24770262 - 24770157
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaaatcacttat 109  Q
    |||| |||| ||||| |||||||||||||   |||||| ||||||||||||||| ||||||         ||||| ||||| |||||||||| |||||||    
T  24770262 aacgtcgcataagacgacgaacaacacaacaccgcacttagacgacgaaatcacaaaagaa---------aaaaatttgatatatgtgaaaaccacttat 24770172  T
Q  110 ttaaattgaaagaaa 124  Q
    ||| |||||||||||    
T  24770171 ttagattgaaagaaa 24770157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 130
Target Start/End: Original strand, 26610852 - 26610939
Alignment:
Q  42 cgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcacttatttaaattgaaagaaatgggaa 130  Q
    |||||| ||||||||||||||| |||  ||||| ||| | |||||||||| |||||| ||| |||||||||||||| ||||||| |||||    
T  26610852 cgcactcagacgacgaaatcacaaaa--aacacaaaatggaaaacttgatatatgtggaaaccacttatttaaattcaaagaaaggggaa 26610939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 71
Target Start/End: Complemental strand, 33614894 - 33614852
Alignment:
Q  29 aacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    ||||| |||||||||||||||||||| ||||||||||||||||    
T  33614894 aacaaaacaatgtcgcactaagacgatgaaatcacgaaagaaa 33614852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 38880647 - 38880759
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag--aaaaacttgatgtatgtga 98  Q
    |||||||||| || || |||||||  | |||||||||| |||||||| | ||||||||||||||| | |||||| ||||  ||||||||||| ||  |||    
T  38880647 aaatcaaacagcgtcgtacaagacggcaaacaacacaacgtcgcactcatacgacgaaatcacgaga-aaacacaaaaggaaaaaacttgatatacctga 38880745  T
Q  99 aaatcacttattta 112  Q
    || |||||||||||    
T  38880746 aattcacttattta 38880759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 71
Target Start/End: Complemental strand, 772575 - 772534
Alignment:
Q  30 acaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    |||| |||| ||||||||||||||||||||||||||||||||    
T  772575 acaaaacaacgtcgcactaagacgacgaaatcacgaaagaaa 772534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 3860990 - 3860925
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaa 66  Q
    ||||||| ||||||||||||||||||| || ||||||  |||||||| | |||| |||||||||||    
T  3860990 aaatcaatcaacgccgcacaagacaacaaataacacagcgtcgcacttaaacgatgaaatcacgaa 3860925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 267 - 308
Target Start/End: Complemental strand, 18226139 - 18226098
Alignment:
Q  267 aagtttcgtcaactatcccctgacattaacaaaacttcaatt 308  Q
    |||||||||||| |||||||||| ||||||||||||||||||    
T  18226139 aagtttcgtcaattatcccctgaaattaacaaaacttcaatt 18226098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 25068106 - 25067986
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaa 100  Q
    |||| ||| ||| ||||||||| | ||||||||||||| | |||||| ||| || |||||||| ||| || ||| ||||||| |||| ||  ||||| ||    
T  25068106 aaataaaaaaacaccgcacaag-cgacgaacaacacaacgccgcactcagatgatgaaatcacaaaa-aagcacaaaagaaagactttat--atgtggaa 25068011  T
Q  101 atcacttatttaaattgaaagaaat 125  Q
    |||||||||||| ||||||||||||    
T  25068010 atcacttatttagattgaaagaaat 25067986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 124
Target Start/End: Original strand, 25287266 - 25287374
Alignment:
Q  15 cgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaaatcacttatttaaa 114  Q
    |||||||||| ||||||||||||| | | |||| |||| || ||||||| ||| | | |  |||||||||||| || || |||||||||||||||||| |    
T  25287266 cgcacaagacgacgaacaacacaacgccacacttagacaacaaaatcacaaaaaacata-aaaagaaaaacttaatatacgtgaaaatcacttatttaga 25287364  T
Q  115 ttgaaagaaa 124  Q
    || |||||||    
T  25287365 ttaaaagaaa 25287374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 33530440 - 33530489
Alignment:
Q  20 aagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaaga 69  Q
    ||||| ||||||||||||| |||| ||||||||||| |||||||||||||    
T  33530440 aagacgacgaacaacacaacgtcgtactaagacgacaaaatcacgaaaga 33530489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 44311860 - 44311925
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaa 66  Q
    ||||||||||||| |||| ||||| |||||||| |||| | |||||| |||||| |||||||||||    
T  44311860 aaatcaaacaacgtcgcagaagacgacgaacaatacaacgacgcactcagacgatgaaatcacgaa 44311925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 1769247 - 1769307
Alignment:
Q  2 aatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatca 62  Q
    ||||||| ||||| || |||||| ||||||||||||||  |||||||||| ||||||||||    
T  1769247 aatcaaataacgcagctcaagacgacgaacaacacaataccgcactaagatgacgaaatca 1769307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 14734005 - 14734069
Alignment:
Q  5 caaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaag 68  Q
    ||||||||| ||||||| ||| || ||||| |||| |||||||||||||||||||||||| ||||    
T  14734005 caaacaacgtcgcacaaagacgacaaacaaaacaacgtcgcactaagacgacgaaatcacaaaag 14734069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 21552442 - 21552478
Alignment:
Q  35 acaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    |||| ||||||||||||||||||||||||||||||||    
T  21552442 acaacgtcgcactaagacgacgaaatcacgaaagaaa 21552478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 120
Target Start/End: Complemental strand, 26492335 - 26492295
Alignment:
Q  80 aaaaacttgatgtatgtgaaaatcacttatttaaattgaaa 120  Q
    ||||||| ||| |||||||||||||||||||||||||||||    
T  26492335 aaaaactagatctatgtgaaaatcacttatttaaattgaaa 26492295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 27997098 - 27996991
Alignment:
Q  16 gcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaaatcacttatttaaat 115  Q
    ||||||||  ||||||||||||||| |||||| |||||||||||| || ||| ||| |  |||| ||   ||||| ||||||||||||  ||||||| ||    
T  27997098 gcacaagatgacgaacaacacaatgccgcactcagacgacgaaataacaaaaaaaaaataaaag-aagttttgatatatgtgaaaatctattatttagat 27997000  T
Q  116 tgaaagaaa 124  Q
    |||||||||    
T  27996999 tgaaagaaa 27996991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 112
Target Start/End: Complemental strand, 39229031 - 39228930
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||| |||||||||||||   |||||| |||| ||||||||||  || |||||| ||| ||||  |||||| | |||||||| ||||||    
T  39229031 aacgccgcacaagacgacgaacaacacaacaacgcactcagacaacgaaatcac--aaaaaacacaaaatgaaagtcttgatatgtgtgaaaaccactta 39228934  T
Q  109 ttta 112  Q
    ||||    
T  39228933 ttta 39228930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 43483758 - 43483694
Alignment:
Q  5 caaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaag 68  Q
    ||||||||| ||||||| ||| |||||||| |||| |||||||||||||| ||||||||| ||||    
T  43483758 caaacaacgtcgcacaaagacgacgaacaaaacaacgtcgcactaagacggcgaaatcacaaaag 43483694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 2528424 - 2528373
Alignment:
Q  20 aagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    ||||| || ||||| ||||||| ||| |||||||||||||||||||||||||    
T  2528424 aagacgacaaacaaaacaatgtagcagtaagacgacgaaatcacgaaagaaa 2528373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 154 - 241
Target Start/End: Complemental strand, 4529955 - 4529868
Alignment:
Q  154 ttctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaagaaaacttagagagaaaacaaagtttctctcact 241  Q
    ||||| |||||||| ||||||||||||| | || || ||||| |||| ||| ||||| ||||||||||||    ||||||||||||||    
T  4529955 ttctatgtcaaaaaatgacctaaaatcacctctctttgatgaatgaaggagaaagaagacttagagagaaggtgaagtttctctcact 4529868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 6002061 - 6001998
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacg 64  Q
    |||||||||||||||||||||||| |||||||||| |  | | |||| ||| ||||||||||||    
T  6002061 aaatcaaacaacgccgcacaagacgacgaacaacaaaccgccacactcagatgacgaaatcacg 6001998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 9933989 - 9933938
Alignment:
Q  20 aagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    ||||| |||||||| |||| |||||||||||||| ||||||||| |||||||    
T  9933989 aagacgacgaacaaaacaacgtcgcactaagacggcgaaatcacaaaagaaa 9933938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 11653886 - 11653794
Alignment:
Q  19 caagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaaga-aacacgaaagaaaaacttgatgtatgtgaaaatcacttattta 112  Q
    |||||| ||||||||||||| |||  ||| ||||||||||||||||||| |  |||  ||| ||||||||  | |||||||||||||||||||||    
T  11653886 caagacgacgaacaacacaacgtcatactcagacgacgaaatcacgaaaaagcacaaaaaataaaaactt--tatatgtgaaaatcacttattta 11653794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 13008629 - 13008688
Alignment:
Q  5 caaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcac 63  Q
    ||||||||||||||||| ||| ||||||||  ||| |||||||||||||||| |||||||    
T  13008629 caaacaacgccgcacaaagacgacgaacaaaccaacgtcgcactaagacgacaaaatcac 13008688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 19296764 - 19296713
Alignment:
Q  144 agaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatga 195  Q
    |||||||||||||||||||||||| |||||||||| || ||||  |||||||    
T  19296764 agaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatga 19296713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 28015515 - 28015456
Alignment:
Q  5 caaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcac 63  Q
    ||||||||| ||||||| ||| |||||||| |||| |||||| |||||||||||||||||    
T  28015515 caaacaacgtcgcacaaagacgacgaacaaaacaaggtcgcattaagacgacgaaatcac 28015456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 309
Target Start/End: Complemental strand, 36900830 - 36900787
Alignment:
Q  267 aagtttcgtcaacta-tcccctgacattaacaaaacttcaatta 309  Q
    ||||||||||||||| |||||||| |||||||||||||||||||    
T  36900830 aagtttcgtcaactactcccctgaaattaacaaaacttcaatta 36900787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 130
Target Start/End: Original strand, 49148193 - 49148286
Alignment:
Q  35 acaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaaatcacttatttaaattgaaagaaatgggaa 130  Q
    ||||||| || || ||||||||||||||||| | |||||| || || ||||| ||| |||||||||| ||||||||||  |||||||||| |||||    
T  49148193 acaatgttgcgctcagacgacgaaatcacgaca-aaacac-aaggagaaactcgatatatgtgaaaaccacttatttagtttgaaagaaaggggaa 49148286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 49167083 - 49167021
Alignment:
Q  5 caaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaa 67  Q
    ||||||||| ||||||| ||| ||||||||| ||| ||||||| ||||||||||||||||||||    
T  49167083 caaacaacgtcgcacaaagacgacgaacaac-caacgtcgcacgaagacgacgaaatcacgaaa 49167021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 309
Target Start/End: Complemental strand, 12232084 - 12232042
Alignment:
Q  267 aagtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    |||||||||||| |||||||||| ||||||||||||| |||||    
T  12232084 aagtttcgtcaattatcccctgaaattaacaaaactttaatta 12232042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 309
Target Start/End: Complemental strand, 31309469 - 31309427
Alignment:
Q  267 aagtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    ||||||||||||||| | |||||| ||||||||||||||||||    
T  31309469 aagtttcgtcaactacctcctgacgttaacaaaacttcaatta 31309427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 32684708 - 32684674
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  32684708 aaatcaaacaacgccgcacaagacgacgaacaaca 32684674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 38798797 - 38798747
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaat 60  Q
    ||||||||||||||| ||||||||||||| |||| ||| ||||||| ||||    
T  38798797 aacgccgcacaagacgacgaacaacacaacgtcgtacttagacgacaaaat 38798747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 309
Target Start/End: Original strand, 42260714 - 42260756
Alignment:
Q  267 aagtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    |||||||||||| ||||| |||| |||||||||||||||||||    
T  42260714 aagtttcgtcaattatccactgaaattaacaaaacttcaatta 42260756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 309
Target Start/End: Complemental strand, 44472894 - 44472852
Alignment:
Q  267 aagtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    |||||||||||| || ||||||| |||||||||||||||||||    
T  44472894 aagtttcgtcaattaccccctgaaattaacaaaacttcaatta 44472852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 46339094 - 46339060
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  46339094 aaatcaaacaacgccgcacaagacgacgaacaaca 46339060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 68
Target Start/End: Complemental strand, 46700051 - 46699993
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaag 68  Q
    ||||||||| ||||| |||||||||||||||||||||  ||||||| || |||| ||||    
T  46700051 aacgccgcagaagacgacgaacaacacaatgtcgcacctagacgacaaactcacaaaag 46699993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 309
Target Start/End: Complemental strand, 46949738 - 46949696
Alignment:
Q  267 aagtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    |||||||||||| || ||||||| |||||||||||||||||||    
T  46949738 aagtttcgtcaattaccccctgaaattaacaaaacttcaatta 46949696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 250
Target Start/End: Complemental strand, 48930660 - 48930607
Alignment:
Q  196 gtgaaagaggaagaaaacttagagagaaaacaaagtttctctcactgaaaaatta 250  Q
    |||||||| ||||||||||||||||||| || || |||||||||| |||||||||    
T  48930660 gtgaaagaagaagaaaacttagagagaatacgaa-tttctctcaccgaaaaatta 48930607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 71
Target Start/End: Complemental strand, 33507737 - 33507696
Alignment:
Q  30 acaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    |||| ||||||||||||||| |||| ||||||||||||||||    
T  33507737 acaaaacaatgtcgcactaaaacgatgaaatcacgaaagaaa 33507696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 124
Target Start/End: Complemental strand, 4530054 - 4529982
Alignment:
Q  49 agacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaaatcacttatttaaattgaaagaaa 124  Q
    ||||||||||||||| |||  ||||| ||||||||| ||||| ||||||||||  ||||| ||| |||||||||||    
T  4530054 agacgacgaaatcacaaaa--aacac-aaagaaaaatttgatatatgtgaaaaatacttacttagattgaaagaaa 4529982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 309
Target Start/End: Original strand, 12231041 - 12231081
Alignment:
Q  269 gtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    |||||||||| || ||||||| |||||||||||||||||||    
T  12231041 gtttcgtcaattaccccctgaaattaacaaaacttcaatta 12231081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 32521964 - 32522000
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacaca 37  Q
    |||||||||||||||||||||||  ||||||||||||    
T  32521964 aaatcaaacaacgccgcacaagatgacgaacaacaca 32522000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 120
Target Start/End: Original strand, 32522045 - 32522073
Alignment:
Q  92 tatgtgaaaatcacttatttaaattgaaa 120  Q
    |||||||||||||||||||||||||||||    
T  32522045 tatgtgaaaatcacttatttaaattgaaa 32522073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 33614995 - 33614955
Alignment:
Q  29 aacaacacaatgtcgcactaagacgacgaaatcacgaaaga 69  Q
    ||||| ||||||||||||||||| ||||||||||| |||||    
T  33614995 aacaaaacaatgtcgcactaagaagacgaaatcacaaaaga 33614955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 181
Target Start/End: Complemental strand, 39228896 - 39228864
Alignment:
Q  149 ggtgattctaggtcaaaaattgacctaaaatca 181  Q
    ||||||||||||||||||| |||||||||||||    
T  39228896 ggtgattctaggtcaaaaaatgacctaaaatca 39228864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 149; Significance: 1e-78; HSPs: 71)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 39567317 - 39567073
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaa 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  39567317 aaatcaaacaacgccgcacaagacaacgaacaacacaacgtcgcactaagacgacgagatcacgaaa-aaacacgaaagaaaaacttgatgtatgtgaaa 39567219  T
Q  101 atcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaa 200  Q
    |||||||||||| ||||||||||| ||| |        ||| |||||| |||||||||||||||||||||||||||||||| ||||  ||||||||||||    
T  39567218 atcacttatttagattgaaagaaaggggga----aaaagatgcagaggcgtgattctaggtcaaaaattgacctaaaatcacccctcctcgatgagtgaa 39567123  T
Q  201 agaggaagaaaacttagagagaaaacaaagtttctctcactgaaaaatta 250  Q
    |||||||||||||||| |||||| ||   |||||||||||| ||||||||    
T  39567122 agaggaagaaaacttaaagagaagacggtgtttctctcactaaaaaatta 39567073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 6 - 225
Target Start/End: Original strand, 2979384 - 2979598
Alignment:
Q  6 aaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaaatcac 105  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  2979384 aaacaacgccgcacaagacgacgaacaacacaacgtcgcactaagacgacgaaatcacgaaa-aaacacgaaagaaaaacttgatgtatgtgaaaatcac 2979482  T
Q  106 ttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagagg 205  Q
    ||||||| |||||||||||  ||||        ||| ||||||||||||| ||||||||||||||||||||||||| ||||  |||||||||||||||||    
T  2979483 ttatttagattgaaagaaagaggaa----aaaagatgcagaggggtgattataggtcaaaaattgacctaaaatcacccctcctcgatgagtgaaagagg 2979578  T
Q  206 aagaaaacttagagagaaaa 225  Q
    |||||||||||||| |||||    
T  2979579 aagaaaacttagagcgaaaa 2979598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 14211242 - 14211011
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaa 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||           ||||||||||||||||||    
T  14211242 aaatcaaacaacgccgcacaagacgacgaacaacacaatgtcgcactaagacgacgaaatcacgaaataaa-----------aacttgatgtatgtgaaa 14211154  T
Q  101 atcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaa 200  Q
    |||||||||||| ||||||||||| || ||        ||| ||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||    
T  14211153 atcacttatttagattgaaagaaagggaaa------aagatgcagaggggtgattctaggtcaaaaattgacctaaaatca-ccctcctcgatgagtgaa 14211061  T
Q  201 agaggaagaaaacttagagagaaaacaaagtttctctcactgaaaaatta 250  Q
    ||||||||||||||||||||||| ||| ||||||||||||| ||||||||    
T  14211060 agaggaagaaaacttagagagaagacagagtttctctcactaaaaaatta 14211011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 28540979 - 28541214
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaa 100  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  28540979 aaatcaaacaacgccgcacaagacgacgaacaacacaacgtcgcactaagacgatgaaatcacgaaa-aaacacgaaagaaaaacttgatgtatgtgaaa 28541077  T
Q  101 atcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaa 200  Q
    |||||||||||| ||||||||||| |||||        ||| ||||||      ||||||||||||||||||||||||||| |||   ||||||||||||    
T  28541078 atcacttatttagattgaaagaaaggggaa----aaaagatgcagagg------tctaggtcaaaaattgacctaaaatcaccccacctcgatgagtgaa 28541167  T
Q  201 agaggaagaaaacttagagagaaaacaaagtttctctcactgaaaaa 247  Q
    ||||||||||||||||||||||| | | ||||||||||||| |||||    
T  28541168 agaggaagaaaacttagagagaagaaagagtttctctcactaaaaaa 28541214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 19103540 - 19103668
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaa 100  Q
    |||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  19103540 aaatcaaacaacgccgcacaagacgactaacaacacaacgtcgcactaagacgacgaaatcacgaaa-aaacatgaaagaaaaacttgatgtatgtgaaa 19103638  T
Q  101 atcacttatttaaattgaaagaaatgggaa 130  Q
    |||||||||||| || |||||||| |||||    
T  19103639 atcacttatttagatcgaaagaaaggggaa 19103668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 10 - 223
Target Start/End: Complemental strand, 38597810 - 38597602
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||| ||||||||||||| | |||||| |||||||||||||||  || || ||| ||| ||||||||||||  ||||||||||||||||    
T  38597810 aacgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcac--aaaaagcacaaaaggaaaaacttgatagatgtgaaaatcactta 38597713  T
Q  109 tttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaag 208  Q
    |||||||||||||||  |||||        |||  |||||||||||||||||||||||| | |||||||| || ||||  |||||||  ||| ||| |||    
T  38597712 tttaaattgaaagaatagggaa----aaaagatgtagaggggtgattctaggtcaaaaaataacctaaaaccacccctcctcgatgaacgaaggagaaag 38597617  T
Q  209 aaaacttagagagaa 223  Q
    |||  ||||||||||    
T  38597616 aaagtttagagagaa 38597602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 10 - 223
Target Start/End: Original strand, 9113800 - 9114009
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||| |||||||||| || | |||||| |||||||||||||||  || |||||| ||| ||||||||||||  ||||||||| ||||||    
T  9113800 aacgccgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcac--aaaaaacacaaaaggaaaaacttgatagatgtgaaaaccactta 9113897  T
Q  109 tttaaattgaaag-aaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaa 207  Q
    |||| ||| |||| |||||||||        |||  |||||||||||||||||| ||||| ||||||||||||| ||||  |||||||  ||||||| ||    
T  9113898 tttagattaaaagaaaatgggaa----aaaagatgtagaggggtgattctaggttaaaaaatgacctaaaatcacccctcctcgatgaacgaaagagaaa 9113993  T
Q  208 gaaaacttagagagaa 223  Q
    ||||  ||||||||||    
T  9113994 gaaagtttagagagaa 9114009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 10 - 241
Target Start/End: Complemental strand, 38007371 - 38007144
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa--gaaaaacttgatgtatgtgaaaatcactt 107  Q
    ||||||||||||||| | ||||| |||||||||| ||| ||||||||||||||| ||| |||||  |||   ||||||||||| | |||||||| |||||    
T  38007371 aacgccgcacaagacgatgaacagcacaatgtcgtacttagacgacgaaatcac-aaaaaaacaaaaaaacaaaaaacttgatatgtgtgaaaaccactt 38007273  T
Q  108 atttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaa 207  Q
    ||||||||||||||||| |||||        |||  ||||||||||||| |||||||||| |||||||||| || ||||  |||||||  ||| ||| ||    
T  38007272 atttaaattgaaagaaaagggaa-----aaagatgtagaggggtgattcgaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaa 38007178  T
Q  208 gaaaacttagagagaaaacaaagtttctctcact 241  Q
    ||||  |||||||||| |   |||||||||||||    
T  38007177 gaaagtttagagagaagattgagtttctctcact 38007144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 223
Target Start/End: Complemental strand, 13007242 - 13007033
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||| ||||||||||||| | |||||| |||||||||||||||  || |||||| ||| ||||||||||||  ||||||||| ||||||    
T  13007242 aacgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcac--aaaaaacacaaaaggaaaaacttgatagatgtgaaaaccactta 13007145  T
Q  109 tttaaattgaaag-aaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaa 207  Q
    |||| |||||||| |||||||||        | |  |||||||||||||||||||||||| |||||||||| || | ||  |||||||  ||| ||| ||    
T  13007144 tttagattgaaagaaaatgggaa----aaaaggtgtagaggggtgattctaggtcaaaaaatgacctaaaaccacctctcctcgatgaacgaaggagaaa 13007049  T
Q  208 gaaaacttagagagaa 223  Q
    ||||  ||||||||||    
T  13007048 gaaagtttagagagaa 13007033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 10332617 - 10332836
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaa-acttgatgtatgtgaa 99  Q
    ||||||||||| |||||||||||| || |||||||||| |||| ||| |  |||| ||||||||||| |||||| |||||||| ||||||| ||| || |    
T  10332617 aaatcaaacaatgccgcacaagacgacaaacaacacaacgtcgtactcatgcgacaaaatcacgaaa-aaacacaaaagaaaacacttgatatatatgga 10332715  T
Q  100 aatcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtga 199  Q
    ||||||||||||| ||||||||||| |  ||        ||| |||||| |||||||||  ||||||| |||| ||||| || |||| ||||| ||||||    
T  10332716 aatcacttatttagattgaaagaaaagataa--aaaaaagatgcagaggtgtgattctaaatcaaaaaatgacttaaaacca-ccctgttcgacgagtga 10332812  T
Q  200 aagaggaagaaaacttagagagaa 223  Q
    ||||| ||||||||||| ||||||    
T  10332813 aagagaaagaaaacttatagagaa 10332836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 13 - 178
Target Start/End: Original strand, 8096575 - 8096735
Alignment:
Q  13 gccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaa-acttgatgtatgtgaaaatcacttattt 111  Q
    ||||| ||| |||||||||||||||| | |||||| |||||| ||||||||  || |||||| |||||||| ||||||| |||||||||| |||||||||    
T  8096575 gccgctcaaaacaacgaacaacacaacgccgcacttagacgatgaaatcacacaa-aaacacaaaagaaaaaacttgatatatgtgaaaaccacttattt 8096673  T
Q  112 aaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaa 178  Q
    | ||||||||||| |||||        || | |||||||||||||||||||||||| ||||||||||    
T  8096674 agattgaaagaaaagggaa----aaaagaaatagaggggtgattctaggtcaaaaa-tgacctaaaa 8096735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 11977018 - 11977131
Alignment:
Q  18 acaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaa-acttgatgtatgtgaaaatcacttatttaaatt 116  Q
    ||||||| |||||||| |||| | | |||| ||||||||||||||| ||| |||||| |||||||| ||||||| |||||||||| |||||||||| |||    
T  11977018 acaagacgacgaacaatacaacgccacacttagacgacgaaatcacaaaaaaaacacaaaagaaaaaacttgatatatgtgaaaaccacttatttagatt 11977117  T
Q  117 gaaagaaatgggaa 130  Q
    |||||||| |||||    
T  11977118 gaaagaaaagggaa 11977131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 223
Target Start/End: Original strand, 6012213 - 6012422
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||| |||||||||||||   |||||| |||||| ||||||||  || |||||| ||| ||||||||||||  | ||||||| ||||||    
T  6012213 aacgccgcacaagacgacgaacaacacaacaccgcacttagacgatgaaatcac--aaaaaacacaaaaggaaaaacttgatagacgtgaaaaacactta 6012310  T
Q  109 tttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaag 208  Q
    |||| ||||||||||| |||||        |||  ||||||||||||||| |||||||| |||||||||| || ||||  || ||||  ||| ||| |||    
T  6012311 tttagattgaaagaaaagggaa---aaaaagatgtagaggggtgattctatgtcaaaaaatgacctaaaaccacccctcctcaatgaacgaaggagaaag 6012407  T
Q  209 aaaacttagagagaa 223  Q
    |||  ||||||||||    
T  6012408 aaagtttagagagaa 6012422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 124
Target Start/End: Complemental strand, 6216909 - 6216799
Alignment:
Q  13 gccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcacttattt 111  Q
    |||||||||||| |||||||||| || | |||| | ||||||||||||||| |||  ||||| |||| ||||||||||| |||||||||| |||||||||    
T  6216909 gccgcacaagacgacgaacaacataacgccgcatttagacgacgaaatcacaaaa--aacacaaaaggaaaaacttgatatatgtgaaaaccacttattt 6216812  T
Q  112 aaattgaaagaaa 124  Q
    | |||||||||||    
T  6216811 agattgaaagaaa 6216799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 17 - 124
Target Start/End: Original strand, 24229866 - 24229973
Alignment:
Q  17 cacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaa-aacttgatgtatgtgaaaatcacttatttaaat 115  Q
    |||||||| |||||||||| || | |||||| ||| ||||||||||| ||| |||||| ||||||| ||||||||  |||||||||||||||||||| ||    
T  24229866 cacaagacgacgaacaacaaaacgccgcacttagatgacgaaatcacaaaa-aaacacaaaagaaacaacttgatagatgtgaaaatcacttatttagat 24229964  T
Q  116 tgaaagaaa 124  Q
    |||||||||    
T  24229965 tgaaagaaa 24229973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 8088280 - 8088401
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaa-acttgatgtatgtgaa 99  Q
    |||||||||||||||||||||||| |  |||||||||| |||||||| |   ||||||||||| ||| |||||| ||||||||   ||||| | ||||||    
T  8088280 aaatcaaacaacgccgcacaagacgataaacaacacaaggtcgcactta---gacgaaatcacaaaaaaaacacaaaagaaaacgtttgatatttgtgaa 8088376  T
Q  100 aatcacttatttaaattgaaagaaa 124  Q
    ||||||||||||| || ||||||||    
T  8088377 aatcacttatttagatcgaaagaaa 8088401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 195
Target Start/End: Original strand, 31391831 - 31392013
Alignment:
Q  13 gccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcac-gaaagaaacac-gaaagaaaaacttgatgtatgtgaaaatcacttatt 110  Q
    |||||||||||| | ||||||||||| |||||||| |||||||||||||||  ||| ||| ||  || ||||||||||||  ||||||||| ||||||||    
T  31391831 gccgcacaagacgaagaacaacacaacgtcgcacttagacgacgaaatcacaaaaaaaaatacataaggaaaaacttgataaatgtgaaaaccacttatt 31391930  T
Q  111 taaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatga 195  Q
    || |||||  |||| ||| ||       |||  |||||||||||||||||||||||| |||||||||| || ||||  |||||||    
T  31391931 tagattgatcgaaaaggggag--aaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatga 31392013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 124
Target Start/End: Original strand, 14726541 - 14726650
Alignment:
Q  15 cgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcacttatttaa 113  Q
    |||||||||| |||||||||||||   |||||| ||||||||||||||| ||| ||||||  ||| ||||||||||| ||| |||||| |||||| |||     
T  14726541 cgcacaagacgacgaacaacacaacaccgcacttagacgacgaaatcac-aaaaaaacacataagaaaaaacttgatatatatgaaaaccacttagttag 14726639  T
Q  114 attgaaagaaa 124  Q
    |||||||||||    
T  14726640 attgaaagaaa 14726650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 26825443 - 26825331
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||  ||||||||||||| | |||||| ||| |||||||||||   | |||||| ||| ||||||||||||  | ||||||| ||||||    
T  26825443 aacgccgcacaagaagacgaacaacacaacgccgcacttagaagacgaaatcac---aaaaacacaaaaggaaaaacttgatagacgtgaaaaccactta 26825347  T
Q  109 tttaaattgaaagaaa 124  Q
    |||| |||||||||||    
T  26825346 tttagattgaaagaaa 26825331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 48 - 223
Target Start/End: Complemental strand, 34945396 - 34945226
Alignment:
Q  48 aagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcacttatttaaattgaaagaaatgggaagnnnnnnngatacaga 146  Q
    |||||||||||||||| |||   |||| |||| |||||||||||  ||||||||| |||||||||| ||||||||||| ||| |        |||  |||    
T  34945396 aagacgacgaaatcacaaaa---acacaaaaggaaaaacttgatagatgtgaaaaccacttatttagattgaaagaaaagggga---aaaaagatgtaga 34945303  T
Q  147 ggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaagaaaacttagagagaa 223  Q
     |||||||||||||||||||| |||||||||| ||||| | ||||||||  ||| ||| ||||||  ||||||||||    
T  34945302 agggtgattctaggtcaaaaaatgacctaaaaccatccttcttcgatgaacgaaggagaaagaaagtttagagagaa 34945226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 6647869 - 6647936
Alignment:
Q  5 caaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    ||||||||||||||||| ||| ||||| | ||||  ||||||||||||||||||||||||||||||||    
T  6647869 caaacaacgccgcacaaagacgacgaatagcacatcgtcgcactaagacgacgaaatcacgaaagaaa 6647936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 34881760 - 34881642
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaa 100  Q
    |||||||||||||||||||||||| |||||||||| |    | |||| ||| || |||||||| ||||||| |  | | ||||||| ||| |||||||||    
T  34881760 aaatcaaacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcac-aaagaaaaaaaagaaaaaaactagatctatgtgaaa 34881662  T
Q  101 atcacttatttaaattgaaa 120  Q
    |||||||||||| |||||||    
T  34881661 atcacttatttagattgaaa 34881642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 41358197 - 41358130
Alignment:
Q  5 caaacaacgccgcacaag-acaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    |||||||||||||||||  || |||||||| ||||||||||||||||||||| |||||||||| ||||    
T  41358197 caaacaacgccgcacaaacacgacgaacaaaacaatgtcgcactaagacgacaaaatcacgaaggaaa 41358130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 35921065 - 35921131
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaa 67  Q
    ||||||||||||| | || ||||| |||||||| | ||||||||||| |||||||||||||||||||    
T  35921065 aaatcaaacaacgtctcataagacgacgaacaatataatgtcgcactcagacgacgaaatcacgaaa 35921131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 35850812 - 35850759
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcac 63  Q
    ||||||||||||||| ||||||||||||| |||| ||| |||||||||||||||    
T  35850812 aacgccgcacaagacgacgaacaacacaacgtcgtacttagacgacgaaatcac 35850759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 146 - 186
Target Start/End: Complemental strand, 7930076 - 7930036
Alignment:
Q  146 aggggtgattctaggtcaaaaattgacctaaaatcatccct 186  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  7930076 aggggtgattctaggtcaaaaattgacctaaaatcacccct 7930036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 130
Target Start/End: Original strand, 11073975 - 11074094
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaaatcacttat 109  Q
    ||||||||||||||| |||||||| |||| |  ||||| |||| |||||||||| ||| | |||  || ||||||||||||  ||||||||  |||||||    
T  11073975 aacgccgcacaagacgacgaacaaaacaacgctgcacttagacaacgaaatcacaaaaaataca-aaaggaaaaacttgatagatgtgaaagccacttat 11074073  T
Q  110 ttaaattgaaagaaatgggaa 130  Q
    ||| ||| ||||||| |||||    
T  11074074 ttagattaaaagaaaagggaa 11074094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 1582160 - 1582223
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacg 64  Q
    |||||||||||||||||||||||| || ||| |||||| |||||||| | |||| |||||||||    
T  1582160 aaatcaaacaacgccgcacaagacgacaaacgacacaacgtcgcactcatacgatgaaatcacg 1582223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 1602655 - 1602592
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacg 64  Q
    |||||||||||||||||||||||| || ||| |||||| |||||||| | |||| |||||||||    
T  1602655 aaatcaaacaacgccgcacaagacgacaaacgacacaacgtcgcactcatacgatgaaatcacg 1602592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 13007850 - 13007783
Alignment:
Q  5 caaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    ||||||||| ||||||| ||| ||||| || |||| || |||||||||||||||||||||||||||||    
T  13007850 caaacaacgtcgcacaaagacgacgaataaaacaacgttgcactaagacgacgaaatcacgaaagaaa 13007783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 126
Target Start/End: Complemental strand, 15571431 - 15571384
Alignment:
Q  79 gaaaaacttgatgtatgtgaaaatcacttatttaaattgaaagaaatg 126  Q
    |||||||||||| |||||||||| |||||||||| |||||||||||||    
T  15571431 gaaaaacttgatatatgtgaaaaccacttatttagattgaaagaaatg 15571384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 20270872 - 20270813
Alignment:
Q  5 caaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcac 63  Q
    ||||||||| ||||||| ||| |||||||| |||| ||||||||||||||||||||||||    
T  20270872 caaacaacgtcgcacaaagacgacgaacaaaacaacgtcgcactaagacgacgaaatcac 20270813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 22397520 - 22397571
Alignment:
Q  20 aagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    ||||| |||||||| |||| |||||||||||||||||||||||| |||||||    
T  22397520 aagacgacgaacaaaacaacgtcgcactaagacgacgaaatcacaaaagaaa 22397571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 33486525 - 33486584
Alignment:
Q  5 caaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcac 63  Q
    ||||||||| ||||||| ||| |||||||| |||| ||||||||||||||||||||||||    
T  33486525 caaacaacgtcgcacaaagacgacgaacaaaacaaggtcgcactaagacgacgaaatcac 33486584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 34866569 - 34866518
Alignment:
Q  20 aagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    ||||| |||||||| | || ||||||||||||||||||||||||||||||||    
T  34866569 aagacgacgaacaaaataacgtcgcactaagacgacgaaatcacgaaagaaa 34866518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 309
Target Start/End: Original strand, 6834515 - 6834557
Alignment:
Q  267 aagtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    |||||||||||| ||||||||||||||||||||| ||||||||    
T  6834515 aagtttcgtcaattatcccctgacattaacaaaatttcaatta 6834557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 309
Target Start/End: Original strand, 11156978 - 11157020
Alignment:
Q  267 aagtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    |||||||||||| || |||||||||||||||||||||||||||    
T  11156978 aagtttcgtcaattaccccctgacattaacaaaacttcaatta 11157020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 20146172 - 20146238
Alignment:
Q  5 caaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaa 70  Q
    |||||||||||| |||| ||| || ||||| |||| |||||||||||||||| ||||||||||||||    
T  20146172 caaacaacgccgtacaaagacgacaaacaaaacaacgtcgcactaagacgacaaaatcacgaaagaa 20146238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 59
Target Start/End: Complemental strand, 25980171 - 25980122
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaa 59  Q
    ||||||||||||||| ||||||||||||||  |||||| |||||||||||    
T  25980171 aacgccgcacaagacgacgaacaacacaataccgcacttagacgacgaaa 25980122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 31802508 - 31802545
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaa 38  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  31802508 aaatcaaacaacgccgcacaagacagcgaacaacacaa 31802545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 38111017 - 38111054
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaa 38  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  38111017 aaatcaaacaacgccgcacaagacaacaaacaacacaa 38111054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 8812123 - 8812171
Alignment:
Q  20 aagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaag 68  Q
    ||||| |||||||| |||| |||||||||||||| ||||||||||||||    
T  8812123 aagacgacgaacaaaacaacgtcgcactaagacggcgaaatcacgaaag 8812171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 124
Target Start/End: Original strand, 26878223 - 26878267
Alignment:
Q  80 aaaaacttgatgtatgtgaaaatcacttatttaaattgaaagaaa 124  Q
    ||||||||||| |||||||||| |||||||||| |||||||||||    
T  26878223 aaaaacttgatttatgtgaaaaccacttatttagattgaaagaaa 26878267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 41214762 - 41214810
Alignment:
Q  78 agaaaaacttgatgtatgtgaaaatcacttatttaaattgaaagaaatg 126  Q
    ||||||||||| |||||||| |||||||||||| | |||||||||||||    
T  41214762 agaaaaacttggtgtatgtggaaatcacttattcagattgaaagaaatg 41214810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 42886520 - 42886484
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacaca 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  42886520 aaatcaaacaacgccgcacaagacgacgaacaacaca 42886484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 6887134 - 6887201
Alignment:
Q  5 caaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    ||||||||| ||||||| ||| ||||||||  ||| ||||||| |||||||||||||||| |||||||    
T  6887134 caaacaacgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgacgaaatcacaaaagaaa 6887201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 9267692 - 9267815
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcac-gaaagaaacacgaaagaaaaacttgatgtatgtgaa 99  Q
    |||||||||||| |   ||||||| |||||||||| ||||||  ||| |||||| ||||||||  ||| |||||||| | ||| | ||||| |||||| |    
T  9267692 aaatcaaacaacacaatacaagacgacgaacaacataatgtcttactcagacgatgaaatcacaaaaaaaaacacgagaaaaataattgatttatgtgga 9267791  T
Q  100 aatcacttatttaaattgaaagaa 123  Q
    || |||||||||| ||| ||||||    
T  9267792 aaccacttatttagattaaaagaa 9267815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 13079287 - 13079236
Alignment:
Q  20 aagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    ||||| ||||| || |||| || |||||||||||||||||||||||||||||    
T  13079287 aagacgacgaataaaacaacgttgcactaagacgacgaaatcacgaaagaaa 13079236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 13080295 - 13080244
Alignment:
Q  20 aagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    ||||| ||||| || |||| || |||||||||||||||||||||||||||||    
T  13080295 aagacgacgaataaaacaacgttgcactaagacgacgaaatcacgaaagaaa 13080244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 15710700 - 15710633
Alignment:
Q  5 caaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    ||||||||||| ||||| |||||||||| | |||| |||||||||||| ||| |||||| ||||||||    
T  15710700 caaacaacgccacacaaagacaacgaacgaaacaacgtcgcactaagatgacaaaatcatgaaagaaa 15710633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 166 - 241
Target Start/End: Original strand, 19103810 - 19103884
Alignment:
Q  166 aattgacctaaaatcatccctattcgatgagtgaaagaggaagaaaacttagagagaaaacaaagtttctctcact 241  Q
    |||||||||||||||| | ||  ||||||||||||||||||| | |||||| | |||| ||| |||||||||||||    
T  19103810 aattgacctaaaatcacctctcctcgatgagtgaaagaggaaaacaactta-aaagaagacagagtttctctcact 19103884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 130
Target Start/End: Complemental strand, 28386932 - 28386833
Alignment:
Q  26 acgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaaatcacttatttaaattgaaagaaat 125  Q
    ||||||||||||| | |||||| ||||||||||||||| ||| |||    ||| ||||||||||| |||||| ||| |||||  ||| |||||||||||     
T  28386932 acgaacaacacaacgccgcacttagacgacgaaatcacaaaaaaaa----aaaaaaaaacttgatatatgtg-aaaccacttggttagattgaaagaaaa 28386838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 41554645 - 41554586
Alignment:
Q  5 caaacaacgccgcacaag-acaacgaacaacacaatgtcgcactaagacgacgaaatcac 63  Q
    ||||||||| |||||||| || ||||| || |||| ||||||||||||||||||||||||    
T  41554645 caaacaacgtcgcacaaggacgacgaataaaacaaggtcgcactaagacgacgaaatcac 41554586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 309
Target Start/End: Complemental strand, 5382472 - 5382430
Alignment:
Q  267 aagtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    |||||||||||| || ||||||| |||||||||||||||||||    
T  5382472 aagtttcgtcaattaccccctgaaattaacaaaacttcaatta 5382430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 309
Target Start/End: Complemental strand, 6809557 - 6809515
Alignment:
Q  267 aagtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    |||||||||||| || ||| |||||||||||||||||||||||    
T  6809557 aagtttcgtcaattaccccatgacattaacaaaacttcaatta 6809515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 9591034 - 9591068
Alignment:
Q  4 tcaaacaacgccgcacaagacaacgaacaacacaa 38  Q
    ||||||||||||||||||||||| |||||||||||    
T  9591034 tcaaacaacgccgcacaagacaatgaacaacacaa 9591068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 10649686 - 10649652
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  10649686 aaatcaaacaacgccgcacaagacgacgaacaaca 10649652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 309
Target Start/End: Complemental strand, 11158085 - 11158043
Alignment:
Q  267 aagtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    |||||| ||||| || |||||||||||||||||||||||||||    
T  11158085 aagttttgtcaattaccccctgacattaacaaaacttcaatta 11158043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 19349716 - 19349678
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaat 39  Q
    |||||||| ||||||||||||||| ||||||||||||||    
T  19349716 aaatcaaataacgccgcacaagacgacgaacaacacaat 19349678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 309
Target Start/End: Complemental strand, 21362582 - 21362540
Alignment:
Q  267 aagtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    |||||||||||| || ||| |||||||||||||||||||||||    
T  21362582 aagtttcgtcaattaccccatgacattaacaaaacttcaatta 21362540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 309
Target Start/End: Complemental strand, 27188802 - 27188760
Alignment:
Q  267 aagtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    |||||||||||| || ||||||| |||||||||||||||||||    
T  27188802 aagtttcgtcaattaccccctgaaattaacaaaacttcaatta 27188760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 36344528 - 36344562
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  36344528 aaatcaaacaacgccgcacaagacgacgaacaaca 36344562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 37425153 - 37425087
Alignment:
Q  6 aaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    |||||||| ||||||| ||| || ||||| |||| ||||||| |||||||| |||||||||||||||    
T  37425153 aaacaacgtcgcacaaagacgacaaacaaaacaacgtcgcacaaagacgacaaaatcacgaaagaaa 37425087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 309
Target Start/End: Complemental strand, 38091481 - 38091439
Alignment:
Q  267 aagtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    |||||||||||| |||| ||||| |||||||||||||||||||    
T  38091481 aagtttcgtcaattatctcctgaaattaacaaaacttcaatta 38091439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 309
Target Start/End: Complemental strand, 38483765 - 38483723
Alignment:
Q  267 aagtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    ||||||| |||| |||||||||| |||||||||||||||||||    
T  38483765 aagtttcatcaattatcccctgaaattaacaaaacttcaatta 38483723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 41184477 - 41184511
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  41184477 aaatcaaacaacgccgcacaagacgacgaacaaca 41184511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 124
Target Start/End: Complemental strand, 7036172 - 7036128
Alignment:
Q  80 aaaaacttgatgtatgtgaaaatcacttatttaaattgaaagaaa 124  Q
    ||||| ||||| |||||||||| |||||||||| |||||||||||    
T  7036172 aaaaaattgatatatgtgaaaaccacttatttagattgaaagaaa 7036128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 124
Target Start/End: Original strand, 8985027 - 8985122
Alignment:
Q  35 acaatgtcgcactaagacgacgaaatcacgaa-----agaaacacgaaagaaaa-acttgatgtatgtgaaaatcactta-tttaaattgaaagaaa 124  Q
    |||||||| ||| |||||||||||||||||||     | |||||| |||||||| ||||||| |||||| |||||||||| |||| |||||||||||    
T  8985027 acaatgtcacac-aagacgacgaaatcacgaagaaaaaaaaacacaaaagaaaacacttgatatatgtggaaatcacttattttagattgaaagaaa 8985122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 26394972 - 26394932
Alignment:
Q  269 gtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    |||||||||| || ||||||| |||||||||||||||||||    
T  26394972 gtttcgtcaattaccccctgaaattaacaaaacttcaatta 26394932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 27500997 - 27500957
Alignment:
Q  269 gtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    |||||||||| || ||||||| |||||||||||||||||||    
T  27500997 gtttcgtcaattaccccctgaaattaacaaaacttcaatta 27500957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 40565111 - 40565175
Alignment:
Q  5 caaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaag 68  Q
    ||||||||| ||||||| ||| || ||||| |||  |||||||||||||||||||||||| ||||    
T  40565111 caaacaacgtcgcacaaagacgacaaacaaaacatggtcgcactaagacgacgaaatcacaaaag 40565175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 141; Significance: 6e-74; HSPs: 84)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 8914727 - 8914482
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaa 100  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  8914727 aaatcaaacagcgccgcacaagacgacgaacaacacaatgtcgcactaagacgacgaaatcacgaaa-aagcacgaaagaaaaacttgatgtatgtgaaa 8914629  T
Q  101 atcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaa 200  Q
    ||| ||||||| |||| ||| ||| |||||        ||| ||||||||| ||||||||||||||||||||||||||||| ||||  ||||||||||||    
T  8914628 atcccttattttaatt-aaaaaaaggggaa--aaaaaagatgcagaggggttattctaggtcaaaaattgacctaaaatcaccccttctcgatgagtgaa 8914532  T
Q  201 agaggaagaaaacttagagagaaaacaaagtttctctcactgaaaaatta 250  Q
    ||||||||||||||||||||||| ||| | ||||||||||| ||||||||    
T  8914531 agaggaagaaaacttagagagaagacataatttctctcactaaaaaatta 8914482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 21289887 - 21290130
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaa 100  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||    
T  21289887 aaatcaaacaacgccgcacaagacaacgaacaccacaacgtcgcactaagacgacgaaatcac-aaaaaaacacgaaagaaaaacttgatgtatgttaaa 21289985  T
Q  101 atcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaa 200  Q
    |||||||||||  |||||||| || |||||        ||| ||||||||||||||||||||||||||||||||||||||| | ||  || |||||||||    
T  21289986 atcacttatttggattgaaag-aaggggaa----aaaagatgcagaggggtgattctaggtcaaaaattgacctaaaatcacctctcctccatgagtgaa 21290080  T
Q  201 agaggaagaaaacttagagagaaaacaaagtttctctcactgaaaaatta 250  Q
    ||||||||||||||||||||||| ||| ||||||||||||| ||||||||    
T  21290081 agaggaagaaaacttagagagaagacagagtttctctcactaaaaaatta 21290130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 16235441 - 16235198
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtg-aa 99  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||    
T  16235441 aaatcaaacaacgccgcacaagacggcgaacaacacaacgtcgcactaagacgatgaaatcacgaaa-aaacacgaaagaaaaacttgatgtatgtgaaa 16235343  T
Q  100 aatcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtga 199  Q
    ||||||||||||| ||||||| ||| || ||        ||| |||| | ||||||||||||||||||||||||||||||||  | |  || ||||||||    
T  16235342 aatcacttatttagattgaaaaaaaaggaaa-----aaagatgcagatgagtgattctaggtcaaaaattgacctaaaatcactcatcctcaatgagtga 16235248  T
Q  200 aagaggaagaaaacttagagagaaaacaaagtttctctcactgaaaaatta 250  Q
    ||||||||||||||||| | |||| ||| ||| ||||||||| ||||||||    
T  16235247 aagaggaagaaaactta-aaagaagacatagtatctctcactaaaaaatta 16235198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 7546629 - 7546415
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaa 100  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||     || |  |||||||||||||||    
T  7546629 aaatcaaacaacgccgcacaagacgacgaacaacacaacgtcgcactaagacgacgaaatcacgaaa-aaacac-----aagactttgatgtatgtgaaa 7546536  T
Q  101 atcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaa 200  Q
    |||||||||||| ||||||||||  |||||        ||| ||||||||||||||||| ||||||||||||||||||||| ||||  |||||||||||     
T  7546535 atcacttatttagattgaaagaagggggaa--aaaaaagatgcagaggggtgattctagatcaaaaattgacctaaaatcacccctcctcgatgagtgag 7546438  T
Q  201 agaggaagaaaacttagagagaa 223  Q
    |||| ||||||||||||||||||    
T  7546437 agagaaagaaaacttagagagaa 7546415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 51303716 - 51303949
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaa 100  Q
    |||||||||||| || || ||||| || |||||||||| |||||||||| |||||||||||||||||||||           ||||||||||||||||||    
T  51303716 aaatcaaacaacacctcataagacgacaaacaacacaacgtcgcactaaaacgacgaaatcacgaaagaaa-----------aacttgatgtatgtgaaa 51303804  T
Q  101 atcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaa 200  Q
    |||||||||||  ||||||| ||| |||||        ||| ||||||| |||||||||||||||||||||| |||||||||||||  ||||||||| ||    
T  51303805 atcacttatttggattgaaaaaaaggggaa----aaaagatgcagaggg-tgattctaggtcaaaaattgacataaaatcatccctcctcgatgagtaaa 51303899  T
Q  201 agaggaagaaaacttagagagaaaacaaagtttctctcactgaaaaatta 250  Q
    ||||||||||||||||||||||| ||| ||||||||||| | ||||||||    
T  51303900 agaggaagaaaacttagagagaagacagagtttctctcattaaaaaatta 51303949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 42460765 - 42460521
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaa 100  Q
    |||||||||||||||||||||||| | |||||||||||   ||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||    
T  42460765 aaatcaaacaacgccgcacaagacgatgaacaacacaa---cgcactaagacgacgaaatcacgaaa--aacacgaaagaaaaacttgatgtatgtggaa 42460671  T
Q  101 atcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaa 200  Q
    |||||||||||| ||||||||||| ||| |        ||| ||||  | ||||| ||||||||||| ||||||||||||||||||  ||||| ||||||    
T  42460670 atcacttatttagattgaaagaaaagggga---aaaaagatgcagattgatgattttaggtcaaaaactgacctaaaatcatccctcctcgataagtgaa 42460574  T
Q  201 agaggaagaa---aacttagagagaaaacaaagtttctctcactgaaaaatta 250  Q
    |||| || ||   || ||| |||||| ||| | ||||||||||| ||||||||    
T  42460573 agagaaaaaaattaatttaaagagaagacataatttctctcactaaaaaatta 42460521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 27706299 - 27706412
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaa 100  Q
    |||| ||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||    
T  27706299 aaattaaacaacgccgcacaagacgacgaacaacacaacgtcacactaagacgacgaaatcacgaaa-aaacacgaaagaaaaatctgatgtatgtgaaa 27706397  T
Q  101 atcacttatttaaat 115  Q
    |||||||||||||||    
T  27706398 atcacttatttaaat 27706412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 35175423 - 35175205
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaa-acttgatgtatgtgaa 99  Q
    |||||||||||||| ||||||||| | |||||||||||||||| ||| |||||||||||| |||||| |||||| |||||||| ||||||| |||||| |    
T  35175423 aaatcaaacaacgctgcacaagacgatgaacaacacaatgtcgtactcagacgacgaaattacgaaaaaaacacaaaagaaaacacttgatatatgtgga 35175324  T
Q  100 aatcacttatttaaattgaaagaaatgggaagnnnnnnngatacaga-ggggtgattctaggtc-aaaaattgacctaaaatcatccctattcgatgagt 197  Q
    |||||||| |||| |||||| |||| | |||         || |||| |||||||||||||||| ||||| |||||||||| || |||| || || ||||    
T  35175323 aatcacttgtttagattgaatgaaaggagaa----aaaatattcagagggggtgattctaggtcaaaaaaatgacctaaaagcacccctcttagacgagt 35175228  T
Q  198 gaaagaggaagaaaacttagaga 220  Q
    ||||||| |||||||||||||||    
T  35175227 gaaagagaaagaaaacttagaga 35175205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 51487125 - 51486999
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaa--cttgatgtatgtga 98  Q
    |||||||||||||||||||||||| ||||||||||||| ||| |||||||| ||||||||||||||| ||||||| ||||||||   ||||||||| | |    
T  51487125 aaatcaaacaacgccgcacaagacgacgaacaacacaacgtcccactaagatgacgaaatcacgaaa-aaacacgcaagaaaaaactttgatgtatataa 51487027  T
Q  99 aaatcacttatttaaattgaaagaaatg 126  Q
    |||||||||||||| |||||||||||||    
T  51487026 aaatcacttatttagattgaaagaaatg 51486999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 12947343 - 12947469
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacg--aaagaaacacgaaagaaaa-acttgatgtatgtg 97  Q
    |||||||||||||||||||||||| ||||||||||||| | |||||| | ||||||||||||||  ||| |||||| |||||||| ||||||| ||||||    
T  12947343 aaatcaaacaacgccgcacaagacgacgaacaacacaaagccgcactcaaacgacgaaatcacgaaaaaaaaacacaaaagaaaacacttgatatatgtg 12947442  T
Q  98 aaaatcacttatttaaattgaaagaaa 124  Q
     |||||||||||||| |||||| ||||    
T  12947443 gaaatcacttatttagattgaaggaaa 12947469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 10 - 223
Target Start/End: Complemental strand, 21431638 - 21431430
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaaatcacttat 109  Q
    ||||||||||||||| ||||||||||||||| |||||| ||||| ||||||||| ||| | |||  |||||||||||||||  ||||||||| |||||||    
T  21431638 aacgccgcacaagacgacgaacaacacaatgccgcacttagacggcgaaatcacaaaaaacaca-aaaagaaaaacttgatagatgtgaaaaccacttat 21431540  T
Q  110 ttaaattgaaag-aaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaag 208  Q
    ||| |||||||| |||||||||        |||  |||||||||||| ||||||||||| |||||||||| || ||||  |||||||  ||| ||| |||    
T  21431539 ttagattgaaagaaaatgggaa----aaaagatgtagaggggtgattttaggtcaaaaa-tgacctaaaaccacccctcctcgatgaacgaaggagaaag 21431445  T
Q  209 aaaacttagagagaa 223  Q
    |||  ||||||||||    
T  21431444 aaagtttagagagaa 21431430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 36461506 - 36461619
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||| ||||||||||||| | |||||| |||||||||||||||  || |||||| |||| |||||||||||  ||||||||||||||||    
T  36461506 aacgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcac--aaaaaacacaaaagaaaaaacttgatagatgtgaaaatcactta 36461603  T
Q  109 tttaaattgaaagaaa 124  Q
    |||| |||||||||||    
T  36461604 tttagattgaaagaaa 36461619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 53508244 - 53508121
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaa-cttgatgtatgtgaa 99  Q
    ||||||||||||  || ||||||| ||||||||||||| | |||| | ||||||||||||||||||| ||||||  |||||||| |||||| ||||||||    
T  53508244 aaatcaaacaacatcgtacaagacgacgaacaacacaacgccgcattcagacgacgaaatcacgaaa-aaacacagaagaaaaaacttgatatatgtgaa 53508146  T
Q  100 aatcacttatttaaattgaaagaaa 124  Q
    ||||||||||||| |||||||||||    
T  53508145 aatcacttatttatattgaaagaaa 53508121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 51923742 - 51923624
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaa 100  Q
    |||||||| ||||||||||||||  ||||||||||||| ||| ||||||||||||||||||||||||           ||||||||||||| ||||||||    
T  51923742 aaatcaaataacgccgcacaagatgacgaacaacacaacgtcacactaagacgacgaaatcacgaaa-----------gaaaaacttgatgcatgtgaaa 51923654  T
Q  101 atcacttatttaaattgaaagaaatgggaa 130  Q
    |||||||||||| ||||||||||| |||||    
T  51923653 atcacttatttagattgaaagaaaggggaa 51923624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 10 - 130
Target Start/End: Original strand, 47042124 - 47042246
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcac-gaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcactt 107  Q
    ||||||||||||||| ||||||||||||| |||| ||| |||||||||||||||  ||| ||| |  |||| |||||| |||| ||||||||||||||||    
T  47042124 aacgccgcacaagacgacgaacaacacaacgtcgtacttagacgacgaaatcacaaaaaaaaagaaaaaagaaaaaacatgatatatgtgaaaatcactt 47042223  T
Q  108 atttaaattgaaagaaatgggaa 130  Q
    ||||||||||||||||| |||||    
T  47042224 atttaaattgaaagaaaagggaa 47042246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 186
Target Start/End: Original strand, 6954771 - 6954943
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||| |||||||| |||| | |||||| |||||||||||||||  || |||||| ||| ||||||||||||  ||||||||  ||||||    
T  6954771 aacgccgcacaagacgacgaacaatacaacgccgcacttagacgacgaaatcac--aaaaaacacaaaatgaaaaacttgatagatgtgaaacccactta 6954868  T
Q  109 tttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccct 186  Q
    |||| ||||||||||| ||| |        |||  |||||||||||||||||||||||| ||||||||||||| ||||    
T  6954869 tttagattgaaagaaaagggga---aaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaatcacccct 6954943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 42 - 223
Target Start/End: Original strand, 50194390 - 50194567
Alignment:
Q  42 cgcactaagacgacgaaatcacgaaagaaacacgaaagaaaa-acttgatgtatgtgaaaatcacttatttaaattgaaagaaatgggaagnnnnnnnga 140  Q
    |||||| ||||||||||||||||||| |||||| |||||||| ||||||| |||||| |||||||||||||| ||||||||| | |||||        ||    
T  50194390 cgcactcagacgacgaaatcacgaaa-aaacacaaaagaaaacacttgatatatgtggaaatcacttatttagattgaaagagaagggaa----aaagga 50194484  T
Q  141 tacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaagaaaacttagagagaa 223  Q
    | ||||| ||||||| ||||||||||| ||| |||||| ||  |||  |||| ||||||||||| | ||||||||||||||||    
T  50194485 tgcagagaggtgattttaggtcaaaaaatgatctaaaaccactccttctcgacgagtgaaagagaacgaaaacttagagagaa 50194567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 10 - 223
Target Start/End: Complemental strand, 40487338 - 40487130
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaaatcacttat 109  Q
    ||||||||||||||| ||||||||||||| | |||||| ||||||||||||||| ||| | |||  ||||||||||||||   | ||||||| |||||||    
T  40487338 aacgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcacaaaaaataca-aaaagaaaaacttgaaagaagtgaaaaccacttat 40487240  T
Q  110 ttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaaga 209  Q
    ||| ||||||||||| ||| |        |||  ||| | |||||||||||||||||| ||||||||||||| ||||  |||||||  ||| ||| ||||    
T  40487239 ttagattgaaagaaaagggga----aaaagatgtagaagagtgattctaggtcaaaaaatgacctaaaatcacccctcctcgatgaacgaaggagaaaga 40487144  T
Q  210 aaacttagagagaa 223  Q
    ||  ||||||||||    
T  40487143 aagtttagagagaa 40487130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 47896165 - 47896052
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||||||||||||||||| | | ||||  ||||||||||||||  || |||||| |||| ||||||||||| |||||||||| ||||||    
T  47896165 aacgccgcacaagacaacgaacaacacaacgccacactttgacgacgaaatcac--aaaaaacacaaaagaaaaaacttgatatatgtgaaaaccactta 47896068  T
Q  109 tttaaattgaaagaaa 124  Q
    |||| |||||||||||    
T  47896067 tttagattgaaagaaa 47896052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 223
Target Start/End: Complemental strand, 10233083 - 10232875
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||| ||||||||||||| | |||||| |||||||||||||||   | |||||| ||| ||||||||||||  | ||||||| ||||||    
T  10233083 aacgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcac---aaaaacacaaaaggaaaaacttgatagacgtgaaaaccactta 10232987  T
Q  109 tttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaag 208  Q
    |||| ||||||||||| ||| |        |||  |||||||||||||||||||||||| |||||||||| || ||||  | |||||  ||| ||| |||    
T  10232986 tttagattgaaagaaaagggga---aaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctccttgatgaacgaaggagaaag 10232890  T
Q  209 aaaacttagagagaa 223  Q
    |||  ||||||||||    
T  10232889 aaagtttagagagaa 10232875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 223
Target Start/End: Complemental strand, 9998480 - 9998271
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||| ||||||||||||| | |||||| |||||||||||||||   | |||||| ||| ||||||||||||  | ||||||| ||||||    
T  9998480 aacgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcac---aaaaacacaaaatgaaaaacttgatagacgtgaaaaccactta 9998384  T
Q  109 tttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtc-aaaaattgacctaaaatcatccctattcgatgagtgaaagaggaa 207  Q
    |||| ||||||||||| ||| |        |||  ||||||||||||||||||| ||||| |||||||||| || ||||  |||||||  ||| ||| ||    
T  9998383 tttagattgaaagaaaagggga---aaaaagatgtagaggggtgattctaggtcaaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaa 9998287  T
Q  208 gaaaacttagagagaa 223  Q
    ||||  ||||||||||    
T  9998286 gaaagtttagagagaa 9998271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 29239362 - 29239250
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaa-acttgatgtatgtgaa 99  Q
    |||||||||| ||||||||||||| ||||||||||||| | |||||| |||||| |||||||||||| |||||| |||||||| ||   || ||||||||    
T  29239362 aaatcaaacagcgccgcacaagacgacgaacaacacaacgccgcactcagacgatgaaatcacgaaaaaaacacaaaagaaaacaccgaatatatgtgaa 29239263  T
Q  100 aatcacttattta 112  Q
    ||||| |||||||    
T  29239262 aatcatttattta 29239250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 124
Target Start/End: Complemental strand, 54148993 - 54148889
Alignment:
Q  21 agacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcacttatttaaattgaa 119  Q
    |||| ||||||||||||||| |||||| ||||||||||||||| ||| ||| || |||| |||||||||||  ||||||||| |||||||||| ||||||    
T  54148993 agacgacgaacaacacaatgccgcacttagacgacgaaatcacaaaaaaaatacaaaagaaaaaacttgatagatgtgaaaaccacttatttagattgaa 54148894  T
Q  120 agaaa 124  Q
    |||||    
T  54148893 agaaa 54148889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 20 - 127
Target Start/End: Complemental strand, 27856183 - 27856076
Alignment:
Q  20 aagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaaatcacttatttaaattgaa 119  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||| | |||| |||| | |  ||||| ||||||||||||| ||||||  || |||    
T  27856183 aagacaacgaacaacacaatgtcgcactcagacgacgaaatcacaaaaaacacacaaaaggatattttgatatatgtgaaaatcagttatttcgatggaa 27856084  T
Q  120 agaaatgg 127  Q
    ||||||||    
T  27856083 agaaatgg 27856076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 29 - 223
Target Start/End: Complemental strand, 29922048 - 29921857
Alignment:
Q  29 aacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaa-acttgatgtatgtgaaaatcacttatttaaattgaaagaaatgg 127  Q
    |||||||||| | | |||| ||||||||||||||||||| |||||| |||||||| ||||||| |||||| |||||||||||||| ||||||||||| ||    
T  29922048 aacaacacaacgccacactcagacgacgaaatcacgaaa-aaacacaaaagaaaacacttgatatatgtggaaatcacttatttagattgaaagaaaggg 29921950  T
Q  128 gaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacct-aaaatcatccctattcgatgagtgaaagaggaagaaaacttagagagaa 223  Q
    |||        |||  ||||  |||||| ||| ||||||| |||||| |||| || ||||  |||| || |||||||| ||||||||||||||||||    
T  29921949 gaa----aaaagatggagagaagtgattttagctcaaaaaatgacctaaaaaccacccctcctcgacgaatgaaagagaaagaaaacttagagagaa 29921857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 29 - 223
Target Start/End: Complemental strand, 29971201 - 29971010
Alignment:
Q  29 aacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaa-acttgatgtatgtgaaaatcacttatttaaattgaaagaaatgg 127  Q
    |||||||||| | | |||| ||||||||||||||||||| |||||| |||||||| ||||||| |||||| |||||||||||||| ||||||||||| ||    
T  29971201 aacaacacaacgccacactcagacgacgaaatcacgaaa-aaacacaaaagaaaacacttgatatatgtggaaatcacttatttagattgaaagaaaggg 29971103  T
Q  128 gaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacct-aaaatcatccctattcgatgagtgaaagaggaagaaaacttagagagaa 223  Q
    |||        |||  ||||  |||||| ||| ||||||| |||||| |||| || ||||  |||| || |||||||| ||||||||||||||||||    
T  29971102 gaa----aaaagatggagagaagtgattttagctcaaaaaatgacctaaaaaccacccctcctcgacgaatgaaagagaaagaaaacttagagagaa 29971010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 10108249 - 10108137
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||| ||||||||||||| | |||||| |||||||||||||||   | |||||| ||| ||||||||||||  | ||||||| ||||||    
T  10108249 aacgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcac---aaaaacacaaaaggaaaaacttgatagacgtgaaaaccactta 10108153  T
Q  109 tttaaattgaaagaaa 124  Q
    |||| |||||||||||    
T  10108152 tttagattgaaagaaa 10108137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 124
Target Start/End: Original strand, 48650812 - 48650922
Alignment:
Q  13 gccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcacttattt 111  Q
    |||||||||||||||||||||||||||| |||||| ||||||| |||||||  || |||||| ||| ||||||||||||  ||||||||| |||||||      
T  48650812 gccgcacaagacaacgaacaacacaatgccgcacttagacgacaaaatcac--aaaaaacacaaaaggaaaaacttgatagatgtgaaaaccacttatac 48650909  T
Q  112 aaattgaaagaaa 124  Q
    | |||||||||||    
T  48650910 agattgaaagaaa 48650922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 43488665 - 43488778
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||| ||||||||||||| | | |||| |||||||||||||||  || |||||| || | |||||||||||  ||||||||| ||||||    
T  43488665 aacgccgcacaagacgacgaacaacacaacgccacacttagacgacgaaatcac--aaaaaacacaaatgaaaaaacttgatagatgtgaaaaccactta 43488762  T
Q  109 tttaaattgaaagaaa 124  Q
    |||| |||||||||||    
T  43488763 tttagattgaaagaaa 43488778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 35865007 - 35865122
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa-cacgaaagaaaaacttgatgtatgtgaaaatcactta 108  Q
    |||||| |||||||| || |||||||||| | |||| | ||||||||||||||| ||  ||| ||| ||||||||||||||| ||||||||||  |||||    
T  35865007 aacgccacacaagacgactaacaacacaacgccgcaattagacgacgaaatcacaaattaaaacacaaaagaaaaacttgatatatgtgaaaactactta 35865106  T
Q  109 tttaaattgaaagaaa 124  Q
    |||| |||||||||||    
T  35865107 tttagattgaaagaaa 35865122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 124
Target Start/End: Original strand, 38860197 - 38860307
Alignment:
Q  12 cgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcacttatt 110  Q
    ||||||||||||| |||||||||| || |||||||| |||||||||||||||   | |||||| || | |||||||||||  ||||||||| ||||||||    
T  38860197 cgccgcacaagacgacgaacaacaaaacgtcgcacttagacgacgaaatcac---aaaaacacaaaggaaaaaacttgatagatgtgaaaaccacttatt 38860293  T
Q  111 taaattgaaagaaa 124  Q
    | ||||||||||||    
T  38860294 tgaattgaaagaaa 38860307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 4019752 - 4019691
Alignment:
Q  6 aaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaa 66  Q
    |||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||    
T  4019752 aaacaacgccgcacaaagacgacgaacaacacaacgtcgcactaagacgacgaaatcacgaa 4019691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 41818231 - 41818158
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacac 74  Q
    |||||||||||  ||||||||||| |||||||||||||||||||||| | |||| |||||||||||| ||||||    
T  41818231 aaatcaaacaataccgcacaagacgacgaacaacacaatgtcgcactcatacgatgaaatcacgaaaaaaacac 41818158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 168
Target Start/End: Original strand, 52923192 - 52923345
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaaatcacttat 109  Q
    ||||||||||||||| ||||||||||||  | | |||| ||||||| ||||| | ||||| |||  || ||||||||||||  ||||||||| |||||||    
T  52923192 aacgccgcacaagacgacgaacaacacagcgccacacttagacgacaaaatcccaaaagacacaa-aaggaaaaacttgatagatgtgaaaaccacttat 52923290  T
Q  110 ttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaat 168  Q
    ||| ||||||||||| |||||        |||  |||||||||||||||||||||||||    
T  52923291 ttagattgaaagaaaagggaa----aaaagatgtagaggggtgattctaggtcaaaaat 52923345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 22844210 - 22844143
Alignment:
Q  5 caaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    ||||||||| ||||||| ||| |||||||| |||||||||||||||||||| ||||||||||||||||    
T  22844210 caaacaacgtcgcacaaagacgacgaacaaaacaatgtcgcactaagacgatgaaatcacgaaagaaa 22844143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 36910716 - 36910829
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacac-gaaagaaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||| |||||||||| || | |||||| ||| | ||||||||| ||| |||||| ||| ||||||||||||  ||||||||| ||||||    
T  36910716 aacgccgcacaagacgacgaacaacaaaacgccgcacttagagg-cgaaatcacaaaa-aaacacagaaggaaaaacttgatagatgtgaaaaccactta 36910813  T
Q  109 tttaaattgaaagaaa 124  Q
    |||| |||||||||||    
T  36910814 tttagattgaaagaaa 36910829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 53807926 - 53808042
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcac----gaaagaaacacgaaagaaaa-acttgatgtatg 95  Q
    ||||||||||| |||||| ||||| ||||||||||||| |||||||| |||||||||||||||     ||| |||||| ||||||||  | |||| | ||    
T  53807926 aaatcaaacaatgccgcagaagacgacgaacaacacaaggtcgcacttagacgacgaaatcacaaaaaaaaaaaacacaaaagaaaacgcctgatatttg 53808025  T
Q  96 tgaaaatcacttattta 112  Q
    |||||||||||||||||    
T  53808026 tgaaaatcacttattta 53808042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 130
Target Start/End: Original strand, 20465045 - 20465164
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||| ||||||| |||||||||||||   | |||| |||||| |||||||| |||  ||||| |||| ||||||||||| ||||| |||||||||||    
T  20465045 aacgccgtacaagacgacgaacaacacaacacctcacttagacgatgaaatcacaaaa--aacacaaaaggaaaaacttgatatatgttaaaatcactta 20465142  T
Q  109 tttaaattgaaagaaatgggaa 130  Q
    |||| ||||||| ||| |||||    
T  20465143 tttatattgaaaaaaaggggaa 20465164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 195
Target Start/End: Complemental strand, 40556725 - 40556544
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||| ||||||||||||| | |||||| |||||||||||||||  |  |||||| ||| | ||||||||||  || |||||| ||||||    
T  40556725 aacgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcac--ataaaacacaaaagggaaaacttgatagatatgaaaaccactta 40556628  T
Q  109 tttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatga 195  Q
    |||| ||  ||||||| |||||        |||   ||||||||||||||||||||||| |||||||||| || ||||  |||||||    
T  40556627 tttatatcaaaagaaaagggaa---aaaaagatgtggaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatga 40556544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 10 - 178
Target Start/End: Original strand, 9797609 - 9797769
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaa-aaacttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||| ||||||||| |     |||||| ||||||||||||||| |||  ||||| |||| | |||||||||  ||||||||| ||||||    
T  9797609 aacgccgcacaagacgacgaacaacgc-----cgcacttagacgacgaaatcacaaaa--aacacaaaagtagaaacttgatagatgtgaaaaccactta 9797701  T
Q  109 tttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaa 178  Q
    |||| ||||||||||| | |||        |||  |||||||||||||||||||||||| ||||||||||    
T  9797702 tttagattgaaagaaaagagaa--aaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaa 9797769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 10229489 - 10229377
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||  ||||||||||||| | |||||| ||| |||||||||||   | |||||| ||| ||||||||||||  | ||||||| ||||||    
T  10229489 aacgccgcacaagatgacgaacaacacaacgccgcacttagaagacgaaatcac---aaaaacacaaaaggaaaaacttgatagacgtgaaaaccactta 10229393  T
Q  109 tttaaattgaaagaaa 124  Q
    |||| |||||||||||    
T  10229392 tttagattgaaagaaa 10229377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 45568520 - 45568632
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcactta 108  Q
    |||||| |||||||| ||||||||||||| | |||||| |||||||||||||||   | |||||  |||| |||||||||||  |||||||||  |||||    
T  45568520 aacgccacacaagacgacgaacaacacaacgccgcacttagacgacgaaatcac---aaaaacagaaaagaaaaaacttgatagatgtgaaaacaactta 45568616  T
Q  109 tttaaattgaaagaaa 124  Q
    |||| |||||||||||    
T  45568617 tttagattgaaagaaa 45568632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 124
Target Start/End: Complemental strand, 1649433 - 1649320
Alignment:
Q  7 aacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaaatcact 106  Q
    |||||| |||||||||||   |||||| |||| | | |||| ||||||||||||||| ||| |||||    |||||| |||||| |||||||||| ||||    
T  1649433 aacaacaccgcacaagacggagaacaatacaacgccacactcagacgacgaaatcacaaaaaaaaca----agaaaatcttgatatatgtgaaaaccact 1649338  T
Q  107 tatttaaattgaaagaaa 124  Q
    |||||| |||||||||||    
T  1649337 tatttagattgaaagaaa 1649320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 166 - 234
Target Start/End: Complemental strand, 51923610 - 51923542
Alignment:
Q  166 aattgacctaaaatcatccctattcgatgagtgaaagaggaagaaaacttagagagaaaacaaagtttc 234  Q
    |||||||||| ||||| ||||  | ||||||||||||||||||||||||||||||||| ||| ||||||    
T  51923610 aattgacctagaatcacccctccttgatgagtgaaagaggaagaaaacttagagagaagacagagtttc 51923542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 130
Target Start/End: Complemental strand, 9320070 - 9319951
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcactta 108  Q
    |||| |||||||||| ||||||||||||||| |||| | |||| |||||||||   || |||||| ||| ||||||||||||  ||||||||| ||||||    
T  9320070 aacgtcgcacaagacgacgaacaacacaatgccgcatttagacaacgaaatca--taaaaaacacaaaaggaaaaacttgatagatgtgaaaaccactta 9319973  T
Q  109 tttaaattgaaagaaatgggaa 130  Q
    |||  ||||||| ||| |||||    
T  9319972 ttttgattgaaaaaaaggggaa 9319951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 247
Target Start/End: Original strand, 21533884 - 21534116
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaaatcacttat 109  Q
    ||||||| ||||||| ||||||||||||| | |||||  |||| |||||||||| ||| ||| || | | |||||||||||  ||||||||| |||||||    
T  21533884 aacgccgtacaagacgacgaacaacacaacgccgcacatagacaacgaaatcacaaaaaaaatacaaga-aaaaacttgatagatgtgaaaaccacttat 21533982  T
Q  110 ttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaaga 209  Q
    ||| |||| |||||| | |  |       |||  ||||||||||||||||||||||||  ||||||||| || || |  ||||| |  ||| ||| ||||    
T  21533983 ttagattggaagaaaagag--gaaaaaaagatgtagaggggtgattctaggtcaaaaa--gacctaaaaccacccatcctcgattaacgaaggagaaaga 21534078  T
Q  210 aaacttagagagaaaacaaagtttctctcactgaaaaa 247  Q
    ||  |||||||||||  | ||||||||||||| |||||    
T  21534079 aagtttagagagaaattagagtttctctcactaaaaaa 21534116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 129
Target Start/End: Original strand, 31271885 - 31272000
Alignment:
Q  13 gccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcacttattt 111  Q
    |||||||||||| |||||||||||||   |||||| |||||| ||||||||  || |||||| |||| |||||||||||  ||||||||| || ||||||    
T  31271885 gccgcacaagacgacgaacaacacaaaaccgcacttagacgaagaaatcac--aaaaaacacaaaagaaaaaacttgataaatgtgaaaaccatttattt 31271982  T
Q  112 aaattgaaagaaatggga 129  Q
    | ||||| ||||| ||||    
T  31271983 agattgatagaaagggga 31272000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 71
Target Start/End: Original strand, 36540642 - 36540696
Alignment:
Q  17 cacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    |||||||| |||| ||| |||| ||||||||||||||||||||||||||||||||    
T  36540642 cacaagacgacgatcaaaacaacgtcgcactaagacgacgaaatcacgaaagaaa 36540696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 12050723 - 12050835
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaaga-aaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||| |||||||||| || | ||| || |||||||||||||||   | |||||| ||||| ||||||||||  ||||||||| ||||||    
T  12050723 aacgccgcacaagacgacgaacaacaaaacgccgcgcttagacgacgaaatcac---aaaaacacaaaagataaaacttgatagatgtgaaaaccactta 12050819  T
Q  109 tttaaattgaaagaaa 124  Q
    | || ||| |||||||    
T  12050820 tctagatttaaagaaa 12050835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 124
Target Start/End: Original strand, 20987913 - 20987987
Alignment:
Q  49 agacgacgaaatcacgaaagaaacacgaaagaaaaa-cttgatgtatgtgaaaatcacttatttaaattgaaagaaa 124  Q
    ||||||||||||||| |||  ||||| ||||||||| || ||| ||| |||||||||||||||||||||||||||||    
T  20987913 agacgacgaaatcacaaaa--aacacaaaagaaaaaactcgatatatttgaaaatcacttatttaaattgaaagaaa 20987987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 38545812 - 38545759
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcac 63  Q
    ||||||||||||||| ||||||||||||| |||| ||| |||||||||||||||    
T  38545812 aacgccgcacaagacgacgaacaacacaacgtcgtacttagacgacgaaatcac 38545759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 241
Target Start/End: Complemental strand, 43016868 - 43016642
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaaatcacttat 109  Q
    |||||| ||||||| |||||||||||||| | ||||||  |||||||||||||| ||| | |||  || || |||||| || ||||||||| ||||||||    
T  43016868 aacgccacacaagataacgaacaacacaacgccgcacttggacgacgaaatcac-aaacagacaa-aaggataaacttaatatatgtgaaa-tcacttat 43016772  T
Q  110 ttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaa--aattgacctaaaatcatccctattcgatgagtgaaagaggaa 207  Q
     |||||||||||||| |||||        ||    |||||||||||||||||||||  || |||||||||| || || |  |||||||  ||||||| ||    
T  43016771 ataaattgaaagaaaggggaa----aaaagacgtggaggggtgattctaggtcaaaagaactgacctaaaaccacccttcctcgatgaacgaaagagaaa 43016676  T
Q  208 gaaaacttagagagaaaacaaagtttctctcact 241  Q
    ||||| ||||||||||   | |||||||||||||    
T  43016675 gaaaatttagagagaagttagagtttctctcact 43016642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 52116119 - 52116191
Alignment:
Q  47 taagacgacgaaatcacgaaagaaa--cacgaaagaaaa-acttgatgtatgtgaaaatcacttatttaaatt 116  Q
    |||||||||||||||| |||| |||  ||| |||||||| ||||||| |||||||||||||||||||||||||    
T  52116119 taagacgacgaaatcatgaaaaaaaaacacaaaagaaaaaacttgatatatgtgaaaatcacttatttaaatt 52116191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 151 - 247
Target Start/End: Original strand, 629118 - 629214
Alignment:
Q  151 tgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaagaaaacttagagagaaaacaaagtttctctcactgaaaaa 247  Q
    ||||| ||||||||| | |||||||||| || ||||  |||||||||||||| | | ||||||||||||||||   | ||||||||||||| |||||    
T  629118 tgattttaggtcaaagaatgacctaaaaccacccctcctcgatgagtgaaagggaaggaaaacttagagagaagttagagtttctctcactaaaaaa 629214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 80 - 241
Target Start/End: Complemental strand, 33579812 - 33579655
Alignment:
Q  80 aaaaacttgatgtatgtgaaaatcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaat 179  Q
    ||||||| ||| ||||||||||||||||||||| |||||||||||  ||||        |||  |||||||||||||||||||||||| |||| |||||     
T  33579812 aaaaactagatatatgtgaaaatcacttatttagattgaaagaaaatggaa----aaaagatgtagaggggtgattctaggtcaaaaaatgacttaaaac 33579717  T
Q  180 catccctattcgatgagtgaaagaggaagaaaacttagagagaaaacaaagtttctctcact 241  Q
    || || | ||||||||  ||| ||  ||||||  ||||||||||    ||||||||||||||    
T  33579716 cacccttcttcgatgaacgaaggataaagaaagtttagagagaagttgaagtttctctcact 33579655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 3606793 - 3606738
Alignment:
Q  3 atcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaa 58  Q
    |||| |||||||| |||||||| ||||||||||||||| |||||| ||||||||||    
T  3606793 atcatacaacgccacacaagacgacgaacaacacaatgccgcactcagacgacgaa 3606738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 25939435 - 25939502
Alignment:
Q  5 caaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    ||||||||||||||||| ||| || ||||| |||| |||||||| |||| ||||||||||||||||||    
T  25939435 caaacaacgccgcacaaagacgactaacaaaacaacgtcgcactgagacaacgaaatcacgaaagaaa 25939502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 12116135 - 12116101
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaaca 35  Q
    |||||||||||||||||||||||||||||||||||    
T  12116135 aaatcaaacaacgccgcacaagacaacgaacaaca 12116101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 247
Target Start/End: Complemental strand, 29249122 - 29249024
Alignment:
Q  150 gtgattctaggtcaaaaattgaccta-aaatcatccctattcgatgagtgaaagaggaagaaaacttagagagaaaacaaagtttctctcactgaaaaa 247  Q
    |||||||||||||||||| ||||||  |||||||| ||  |||||||||||| ||| ||||||| ||| ||||||   | ||||||||||||| |||||    
T  29249122 gtgattctaggtcaaaaagtgaccttcaaatcatcacttctcgatgagtgaaggagaaagaaaaattaaagagaagttagagtttctctcactaaaaaa 29249024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 309
Target Start/End: Original strand, 32750713 - 32750755
Alignment:
Q  267 aagtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    |||||||||||| |||||||||| |||||||||||||||||||    
T  32750713 aagtttcgtcaattatcccctgaaattaacaaaacttcaatta 32750755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 309
Target Start/End: Complemental strand, 40515002 - 40514960
Alignment:
Q  267 aagtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    |||||||||||| |||||||||| |||||||||||||||||||    
T  40515002 aagtttcgtcaattatcccctgaaattaacaaaacttcaatta 40514960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 32246465 - 32246400
Alignment:
Q  2 aatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaa 67  Q
    |||||||||||| ||||||| || || ||||||| ||| ||||||| |||||| ||||||||||||    
T  32246465 aatcaaacaacgtcgcacaaaacgacaaacaacataatttcgcactcagacgatgaaatcacgaaa 32246400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 53426934 - 53426889
Alignment:
Q  26 acgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    |||||||||| || |||||||||||||||||||||||| |||||||    
T  53426934 acgaacaacaaaacgtcgcactaagacgacgaaatcacaaaagaaa 53426889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 913272 - 913336
Alignment:
Q  5 caaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaag 68  Q
    ||||||||| ||||||| ||| |||||||| |||||| |||||||||||  ||||||||||||||    
T  913272 caaacaacgtcgcacaaagacgacgaacaaaacaatgccgcactaagacagcgaaatcacgaaag 913336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 124
Target Start/End: Original strand, 20608977 - 20609078
Alignment:
Q  13 gccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaaatcacttattta 112  Q
    |||||||||||| || |||||||||| | |||| | ||||||||||||||| ||||          |||||||||||| ||||| |||| ||||||||||    
T  20608977 gccgcacaagacgactaacaacacaacgccgcaattagacgacgaaatcacaaaag----------gaaaaacttgatatatgttaaaaccacttattta 20609066  T
Q  113 aattgaaagaaa 124  Q
     |||||||||||    
T  20609067 gattgaaagaaa 20609078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 251
Target Start/End: Complemental strand, 22290814 - 22290715
Alignment:
Q  151 tgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaagaaaacttagagagaaaacaaagtttctctcactgaaaaatta 250  Q
    ||||||||| |||||||| ||  ||||||||| |||   | ||||||||||||| ||||||||||| | |||||   |||||||||||||| ||||||||    
T  22290814 tgattctagatcaaaaat-gaattaaaatcatacctccactatgagtgaaagagaaagaaaacttaaaaagaaattgaagtttctctcactaaaaaatta 22290716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 36734729 - 36734765
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacaca 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  36734729 aaatcaaacaacgccgcacaagacgacgaacaacaca 36734765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 116
Target Start/End: Original strand, 44960027 - 44960132
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||| ||||| || ||||   |||||| |||||||||||||||  || |||||  ||| ||||||||| ||  ||||||||| ||||||    
T  44960027 aacgccgcacaagacgacgaataatacaacaccgcacttagacgacgaaatcac--aaaaaacataaaaggaaaaacttaatagatgtgaaaaccactta 44960124  T
Q  109 tttaaatt 116  Q
    ||||||||    
T  44960125 tttaaatt 44960132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 39340357 - 39340290
Alignment:
Q  5 caaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    ||||||||||||||||| ||| |||| ||| |||| ||||||||||||||   |||||||||||||||    
T  39340357 caaacaacgccgcacaaagacgacgagcaaaacaaagtcgcactaagacggtaaaatcacgaaagaaa 39340290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 50460333 - 50460282
Alignment:
Q  20 aagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    |||||||||||||| ||||  |||||||||| |||| |||||||||||||||    
T  50460333 aagacaacgaacaaaacaacatcgcactaaggcgacaaaatcacgaaagaaa 50460282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 309
Target Start/End: Complemental strand, 1033895 - 1033853
Alignment:
Q  267 aagtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    |||||||||||| || ||||||| |||||||||||||||||||    
T  1033895 aagtttcgtcaattaccccctgatattaacaaaacttcaatta 1033853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 25162473 - 25162439
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  25162473 aaatcaaacaacgccgcacaagacgacgaacaaca 25162439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 35499235 - 35499269
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  35499235 aaatcaaacaacgccgcacaagacgacgaacaaca 35499269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 36906159 - 36906125
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  36906159 aaatcaaacaacgccgcacaagacgacgaacaaca 36906125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 42719554 - 42719520
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  42719554 aaatcaaacaacgccgcacaagacgacgaacaaca 42719520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 49552261 - 49552295
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  49552261 aaatcaaacaacgccgcacaagacgacgaacaaca 49552295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 309
Target Start/End: Original strand, 54800095 - 54800137
Alignment:
Q  267 aagtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    |||||||||||| |||||| |||| ||||||||||||||||||    
T  54800095 aagtttcgtcaattatcccttgacgttaacaaaacttcaatta 54800137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 4821692 - 4821623
Alignment:
Q  143 cagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaagaaaa 212  Q
    |||||| |||||| ||||||||||| |||||||||| || ||||  |||| || |||||||| |||||||    
T  4821692 cagaggagtgattataggtcaaaaaatgacctaaaaccaccccttctcgacgaatgaaagagaaagaaaa 4821623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 200
Target Start/End: Complemental strand, 22844083 - 22844027
Alignment:
Q  144 agaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaa 200  Q
    |||||||||||| | |||||||||||||||| |||||| |||| || ||||| ||||    
T  22844083 agaggggtgattttgggtcaaaaattgaccttaaatcagccctctttgatgaatgaa 22844027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 25461070 - 25461134
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacga 65  Q
    ||||||||||||| |||| ||||| |||||||||| || | |||||| | |||||||| ||||||    
T  25461070 aaatcaaacaacgtcgcataagacgacgaacaacataacgccgcactcaaacgacgaagtcacga 25461134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 26739426 - 26739462
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacaca 37  Q
    ||||||||| |||||||||||||||| ||||||||||    
T  26739426 aaatcaaacgacgccgcacaagacaatgaacaacaca 26739462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 31794108 - 31794072
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacaca 37  Q
    ||||||||||||||||||||| || ||||||||||||    
T  31794108 aaatcaaacaacgccgcacaaaacgacgaacaacaca 31794072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 37280425 - 37280385
Alignment:
Q  269 gtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    |||||||||| || ||||||| |||||||||||||||||||    
T  37280425 gtttcgtcaattaccccctgaaattaacaaaacttcaatta 37280385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 39285460 - 39285420
Alignment:
Q  269 gtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    |||||||||| || ||||||| |||||||||||||||||||    
T  39285460 gtttcgtcaattaccccctgaaattaacaaaacttcaatta 39285420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 134; Significance: 9e-70; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 14801844 - 14801598
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaa 100  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  14801844 aaatcaaacagcgccgcacaagacgacgaacaacacaatgtcgcactaagacgacgaaatcacgaaa-aagcacgaaagaaaaacttgatgtatgtgaaa 14801746  T
Q  101 atcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaa 200  Q
    ||| ||||||| |||| ||| ||| |||||         || ||||||||| ||||||||||||||||||||||||||||| ||||  ||||||||||||    
T  14801745 atcccttattttaatt-aaaaaaaggggaa-aaaaaagaatgcagaggggttattctaggtcaaaaattgacctaaaatcaccccttctcgatgagtgaa 14801648  T
Q  201 agaggaagaaaacttagagagaaaacaaagtttctctcactgaaaaattaa 251  Q
    ||||||||||||||||||||||| ||| | ||||||||||| |||||||||    
T  14801647 agaggaagaaaacttagagagaagacataatttctctcact-aaaaattaa 14801598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 8102743 - 8102498
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaa 100  Q
    |||||||||||||||||||||||| ||||| ||||||| || ||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||    
T  8102743 aaatcaaacaacgccgcacaagacgacgaaaaacacaacgttgcactaagacgacgaaatcacgaaa-aaacacaaaagaaaaacttgatgtttgtgaaa 8102645  T
Q  101 atcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaatt-gacctaaaatcatccctattcgatgagtga 199  Q
    |||||||||||| ||||||||||| | |||         || |||||||||||||||||||||||||||  ||||||||||| ||||  |||||  || |    
T  8102644 atcacttatttagattgaaagaaaggagaa--aaaaaatatgcagaggggtgattctaggtcaaaaattaaacctaaaatcacccctcctcgatatgtta 8102547  T
Q  200 aagaggaagaaaacttagagagaaaacaaagtttctctcactgaaaaat 248  Q
    |||| ||||||||||||||||||| | | ||||||||||||| ||||||    
T  8102546 aagaagaagaaaacttagagagaagaaatagtttctctcactaaaaaat 8102498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 546047 - 545838
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaa 100  Q
    ||||||||||||| |||||||||| ||||||||| ||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  546047 aaatcaaacaacgtcgcacaagacgacgaacaacgcaacgtcgcactaagacgatgaaatcacgaaa-aaacacgaaagaaaaacttgatgtatgtgaaa 545949  T
Q  101 atcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaa 200  Q
    ||  |||||||| ||||||||||| |||||        |||  ||| | |||||||||||||||||| || |||||||||| ||||  ||||||||||||    
T  545948 attgcttatttagattgaaagaaaggggaa----aaaagatgtagaagagtgattctaggtcaaaaa-tggcctaaaatcacccctcctcgatgagtgaa 545854  T
Q  201 agaggaagaaaactta 216  Q
    ||||||||||||||||    
T  545853 agaggaagaaaactta 545838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 30776689 - 30776509
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaa 100  Q
    |||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||    
T  30776689 aaatcaaacaacgccgcacaagatgacgaacaacacaacgtcgcactaagacgacgaaatcacgaaa-aaacacaaaagaaaaacttgatgtatgtggaa 30776591  T
Q  101 atcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccct 186  Q
    || ||||||||| ||||||||||| | |||         || ||||||||||||||||||||||||||||||||||||||| ||||    
T  30776590 attacttatttagattgaaagaaaggagaa----aaaatatgcagaggggtgattctaggtcaaaaattgacctaaaatcacccct 30776509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 1523425 - 1523187
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaa 100  Q
    ||||||||||| | |||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||    ||||||||||||||||||||| ||    
T  1523425 aaatcaaacaatgtcgcacaagacgacgaacaacacaacgtcgcactaagacgacgaaatcacgaaa-aaac----aagaaaaacttgatgtatgtggaa 1523331  T
Q  101 atcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaa 200  Q
    |||||||||||| ||||||||||| | |||         || |||| |||||||||||||||||||||||||||||||||| ||||  |  ||| |||||    
T  1523330 atcacttatttagattgaaagaaaagagaa-----aaaaatgcaga-gggtgattctaggtcaaaaattgacctaaaatcacccctccttcatgtgtgaa 1523237  T
Q  201 agaggaagaaaacttagagagaaaacaaagtttctctcactgaaaaatta 250  Q
    |||| || |||||||||||||||   | |||||||||||||  |||||||    
T  1523236 agagaaataaaacttagagagaatgtagagtttctctcactataaaatta 1523187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 80 - 247
Target Start/End: Complemental strand, 14801152 - 14800989
Alignment:
Q  80 aaaaacttgatgtatgtgaaaatcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaat 179  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||| |||||         |||||||||||||||||||| ||||||||| |||||||||    
T  14801152 aaaaacttgatgtatgtgaaaattacttatttagattgaaagaaaggggaaaaaat----atacagaggggtgattctagatcaaaaattaacctaaaat 14801057  T
Q  180 catccctattcgatgagtgaaagaggaagaaaacttagagagaaaacaaagtttctctcactgaaaaa 247  Q
    || | ||  || |||||||||||| |||||||| ||||||| || ||| ||||||| ||||| |||||    
T  14801056 cacctctcctcaatgagtgaaagatgaagaaaaattagagaaaagacagagtttctgtcactaaaaaa 14800989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 223
Target Start/End: Original strand, 33053243 - 33053452
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||| ||||||||||||| | |||||| |||||||||||||||  || |||||| ||| ||||||||||||  ||||||||| ||||||    
T  33053243 aacgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcac--aaaaaacacaaaaggaaaaacttgatagatgtgaaaaccactta 33053340  T
Q  109 tttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaag 208  Q
    |||| ||||||||||| ||| |        |||  |||||| ||||||||||||||||| |||||||||| || ||||  |||||||  ||| ||| |||    
T  33053341 tttagattgaaagaaaagggga---aaaaagatgtagagggatgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaag 33053437  T
Q  209 aaaacttagagagaa 223  Q
    |||  ||||||||||    
T  33053438 aaagtttagagagaa 33053452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 30493553 - 30493341
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaa-acttgatgtatgtgaa 99  Q
    |||||||||||||| ||||||||| |||||||||||||   |||||| |||||| |||||||||||  |||||| |||||||| ||||||| |||||| |    
T  30493553 aaatcaaacaacgctgcacaagacgacgaacaacacaacaccgcactcagacgaggaaatcacgaa--aaacacaaaagaaaacacttgatatatgtgga 30493456  T
Q  100 aatcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtga 199  Q
    |||||||||||||  |||||||||| |||||        ||| |  | |||||||||||||||||||| ||||| |||| || |||| ||||| ||||||    
T  30493455 aatcacttatttagtttgaaagaaa-gggaa----aaaagatgc--atgggtgattctaggtcaaaaaatgaccgaaaacca-ccctcttcgacgagtga 30493364  T
Q  200 aagaggaagaaaacttagagaga 222  Q
    ||||  ||||||||||| |||||    
T  30493363 aagaaaaagaaaacttaaagaga 30493341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 178
Target Start/End: Complemental strand, 34018568 - 34018411
Alignment:
Q  17 cacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaa-cttgatgtatgtgaaaatcacttatttaaat 115  Q
    |||||||| ||||||||||||| | | |||| ||||||||||||||| |||  ||||| ||||||||| |||||| |||||||||| |||||||||||||    
T  34018568 cacaagacgacgaacaacacaacgccacacttagacgacgaaatcacaaaa--aacacaaaagaaaaaacttgatatatgtgaaaaccacttatttaaat 34018471  T
Q  116 tgaaag-aaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaa 178  Q
    |||||| ||||||| |        |||  |||||||||||||||||||||||| ||||||||||    
T  34018470 tgaaagaaaatgggta----aagagatgtagaggggtgattctaggtcaaaaaatgacctaaaa 34018411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 178
Target Start/End: Original strand, 3913655 - 3913813
Alignment:
Q  16 gcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcacttatttaaa 114  Q
    ||||||||| ||||||||||||| | |||||| |||||||||||| ||  || |||||| |||| |||||||||||  ||||||||| |||||||||| |    
T  3913655 gcacaagacgacgaacaacacaacgccgcacttagacgacgaaataac--aaaaaacacaaaagaaaaaacttgatagatgtgaaaaccacttatttaga 3913752  T
Q  115 ttgaaaga-aatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaa 178  Q
    |||||||| ||||||||        ||| | ||||||||||||||||||||||| ||||||||||    
T  3913753 ttgaaagagaatgggaa----aaaagatgcggaggggtgattctaggtcaaaaaatgacctaaaa 3913813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 218
Target Start/End: Original strand, 32191801 - 32192011
Alignment:
Q  5 caaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaa-acttgatgtatgtgaaaatc 103  Q
    ||||||||||| |||||| ||||||||||||||| | |||||| ||||||| ||||||||||| ||| || |||||||| ||||||| |||||  |||||    
T  32191801 caaacaacgccacacaagtcaacgaacaacacaacgccgcacttagacgacaaaatcacgaaa-aaatacaaaagaaaacacttgatatatgtagaaatc 32191899  T
Q  104 acttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaaga 203  Q
    ||||||||| || |||| ||| ||   |       ||| |||| |||||||| ||| |||||||  ||||||||| || ||||  | ||||| |||||||    
T  32191900 acttatttagatcgaaataaaagg---gggaaaaagatgcagaagggtgattgtagatcaaaaaaggacctaaaaccacccctccttgatgaatgaaaga 32191996  T
Q  204 ggaagaaaacttaga 218  Q
    | |||||||||||||    
T  32191997 gaaagaaaacttaga 32192011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 7976255 - 7976355
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaa-acttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||| |||||||||||||   |||||| ||||||||||||||||||| |||||| |||||||| |||| || |||||| ||||||||||    
T  7976255 aacgccgcacaagacgacgaacaacacaacaacgcactcagacgacgaaatcacgaaaaaaacacaaaagaaaacactt-atatatgtggaaatcactta 7976353  T
Q  109 tt 110  Q
    ||    
T  7976354 tt 7976355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 130
Target Start/End: Complemental strand, 32059924 - 32059803
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaa-acacgaaagaaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||| ||||||||||||| ||| |||| |||||| |||||||| ||| || | | |||| |||||||||||  |||||||||  |||||    
T  32059924 aacgccgcacaagacgacgaacaacacaacgtcacacttagacgaagaaatcacaaaaaaacagaagaaaaaaaaacttgatacatgtgaaaactactta 32059825  T
Q  109 tttaaattgaaagaaatgggaa 130  Q
    |||| ||||||||||| |||||    
T  32059824 tttagattgaaagaaaagggaa 32059803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 32327292 - 32327405
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||| ||||||||||||| | |||||| |||| | ||||||||  || |||||| ||| ||||||||||||  ||||||||| ||||||    
T  32327292 aacgccgcacaagacgacgaacaacacaacgccgcacttagactatgaaatcac--aaaaaacacaaaaggaaaaacttgatagatgtgaaaaccactta 32327389  T
Q  109 tttaaattgaaagaaa 124  Q
    |||| |||||||||||    
T  32327390 tttatattgaaagaaa 32327405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 220
Target Start/End: Complemental strand, 606219 - 606013
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||  ||||||||||||| | |||||| |||||||||||||||  ||  ||||| ||| |||||| |||||  ||||||||| ||||||    
T  606219 aacgccgcacaagatgacgaacaacacaacgccgcacttagacgacgaaatcac--aaataacacaaaaggaaaaatttgatagatgtgaaaaccactta 606122  T
Q  109 tttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaag 208  Q
    |||| ||||||||||| ||| |        |||  ||||||||||| |||||||||||| |||| |||||||| ||||  |||||||  ||| ||| |||    
T  606121 tttagattgaaagaaaagggga---aaaaagatgtagaggggtgatcctaggtcaaaaaatgacataaaatcacccctcctcgatgaacgaaggagaaag 606025  T
Q  209 aaaacttagaga 220  Q
    |||  |||||||    
T  606024 aaagtttagaga 606013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 1933761 - 1933874
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcg-cactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtga 98  Q
    ||||||||||| |||||||||||| || | |||||||| | |  | || ||||||||||||||||||| |||||| |||| ||||||||||| |||||||    
T  1933761 aaatcaaacaatgccgcacaagacgactagcaacacaacgcccactctcagacgacgaaatcacgaaaaaaacacaaaagaaaaaacttgatatatgtga 1933860  T
Q  99 aaatcacttattta 112  Q
    |||| |||||||||    
T  1933861 aaataacttattta 1933874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 223
Target Start/End: Complemental strand, 23128633 - 23128424
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaaatcacttat 109  Q
    |||||| |||||||| ||||||||||||| | |||||| |||||| |||||||| ||| | |||  || ||||||||||||  ||||||||| |||||||    
T  23128633 aacgccacacaagacgacgaacaacacaacgccgcacttagacgatgaaatcacaaaaaataca-aaaggaaaaacttgatagatgtgaaaaccacttat 23128535  T
Q  110 ttaaattgaaag-aaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaag 208  Q
    ||| | |||||| ||||||| |        |||  |||||||||||||||||||||||| ||||||||||  ||||||  || ||||  ||| ||| |||    
T  23128534 ttagaatgaaagaaaatgggga----aaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaactatccctcctcaatgaacgaaggagaaag 23128439  T
Q  209 aaaacttagagagaa 223  Q
    |||  ||||||||||    
T  23128438 aaagtttagagagaa 23128424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 28981198 - 28981004
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaa 100  Q
    |||||||||||| ||||| ||||| ||||||||||||| | || ||| ||||||  ||||||| ||| ||| |   || ||| ||||||| |||||| ||    
T  28981198 aaatcaaacaacaccgcagaagacgacgaacaacacaacgccgtactcagacgataaaatcacaaaaaaaaaa---aaaaaacacttgatatatgtggaa 28981102  T
Q  101 atcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaa 200  Q
    |||||||||||| ||||||||||| |||||        ||||| || |  | ||||||||||||||| |||||||||| || |||||||||| |||||||    
T  28981101 atcacttatttagattgaaagaaa-gggaa----aaaagatacggaagaataattctaggtcaaaaa-tgacctaaaaccaaccctattcgacgagtgaa 28981008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 195
Target Start/End: Complemental strand, 12170478 - 12170329
Alignment:
Q  42 cgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcacttatttaaattgaaagaaatgggaagnnnnnnnga 140  Q
    |||||| ||||||||||||||| |||  ||||| ||| ||||||||||||  ||||||||| |||||||||| ||||||||||| ||| |        ||    
T  12170478 cgcacttagacgacgaaatcacaaaa--aacacaaaacgaaaaacttgatagatgtgaaaaccacttatttagattgaaagaaaagggga---aaaaaga 12170384  T
Q  141 tacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatga 195  Q
    |  |||||||||||||||||||||||| |||||||||| || ||||  |||||||    
T  12170383 tgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatga 12170329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 127678 - 127584
Alignment:
Q  17 cacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcacttattta 112  Q
    |||||||| ||||||||||||| |  ||||| |||||||||||||||  || |||||| ||| |||||||||||| |||||||||| ||||||||||    
T  127678 cacaagacgacgaacaacacaacgctgcacttagacgacgaaatcac--aaaaaacacaaaaggaaaaacttgatatatgtgaaaaccacttattta 127584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 30608589 - 30608702
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgca-ctaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||| ||||||||||||| | || | || ||||||||||||||| ||| | |||  |||  |||||||||| |||||||||| |||| |    
T  30608589 aacgccgcacaagacgacgaacaacacaacgacgtaacttagacgacgaaatcacaaaaaataca--aaatgaaaacttgatatatgtgaaaaccactaa 30608686  T
Q  109 tttaaattgaaagaaa 124  Q
    |||| |||||||||||    
T  30608687 tttagattgaaagaaa 30608702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 528419 - 528546
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaa-aacttgatgtatgtgaa 99  Q
    |||||||||||||||||||||||  || || ||||||| ||||||||  |||||||||||||||||| ||||||  ||||||    ||||| ||| ||||    
T  528419 aaatcaaacaacgccgcacaagatgacaaataacacaacgtcgcacttggacgacgaaatcacgaaa-aaacac--aagaaattttttgatatatatgaa 528515  T
Q  100 aatcacttatttaaattgaaagaaatgggaa 130  Q
    ||  ||||||||||||| ||||||| |||||    
T  528516 aaatacttatttaaattaaaagaaaagggaa 528546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 7515277 - 7515389
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaa-aaacttgatgtatgtgaaaatcactta 108  Q
    |||| ||| |||||| |||||||||| || | |||||| |||||||||||||||   | |||||| |||||| |||||||||  ||||||||| ||||||    
T  7515277 aacgtcgcccaagacgacgaacaacaaaacgccgcacttagacgacgaaatcac---aaaaacacaaaagaagaaacttgatagatgtgaaaaccactta 7515373  T
Q  109 tttaaattgaaagaaa 124  Q
    |||| |||| ||||||    
T  7515374 tttagattggaagaaa 7515389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 31804375 - 31804339
Alignment:
Q  35 acaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    |||||||||||||||||||||||||||||||||||||    
T  31804375 acaatgtcgcactaagacgacgaaatcacgaaagaaa 31804339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 223
Target Start/End: Original strand, 68076 - 68284
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcactta 108  Q
    |||||||||||||||   ||| |||||||   | |||| ||||||||||||||| |||  ||||| |||| |||||||||||  ||||||||| ||||||    
T  68076 aacgccgcacaagacggtgaataacacaacaccacacttagacgacgaaatcacaaaa--aacacaaaaggaaaaacttgatagatgtgaaaaccactta 68173  T
Q  109 tttaaattgaaagaaatgggaagnnnnnnngatacaga-ggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaa 207  Q
    |||| ||| ||||||| ||| |        |||  ||| ||||||||||||||||||||||| |||||||| |||||||  |||||||  ||| ||| ||    
T  68174 tttagattaaaagaaaagggga----aaaagatgtagagggggtgattctaggtcaaaaatt-acctaaaaccatccctcctcgatgaacgaaggagaaa 68268  T
Q  208 gaaaacttagagagaa 223  Q
    ||||  ||||||||||    
T  68269 gaaagtttagagagaa 68284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 10744741 - 10744682
Alignment:
Q  5 caaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcac 63  Q
    ||||||||| ||||||| ||| |||||||| |||| ||||||||||||||||||||||||    
T  10744741 caaacaacgtcgcacaaagacgacgaacaaaacaaggtcgcactaagacgacgaaatcac 10744682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 309
Target Start/End: Complemental strand, 3788820 - 3788778
Alignment:
Q  267 aagtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    ||||||| |||| ||||||||||||||||||||||||||||||    
T  3788820 aagtttcatcaattatcccctgacattaacaaaacttcaatta 3788778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 220
Target Start/End: Original strand, 7976376 - 7976445
Alignment:
Q  150 gtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaagaaaacttagaga 220  Q
    ||||||||||||||||||| ||||||||| || || |  ||||||||||||| || |||||||||||||||    
T  7976376 gtgattctaggtcaaaaat-gacctaaaaccacccatgctcgatgagtgaaaaagaaagaaaacttagaga 7976445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 22571495 - 22571458
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaa 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  22571495 aaatcaaacaacgccgcacaagacgacgaacaacacaa 22571458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 25398603 - 25398538
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaa 66  Q
    |||||||| ||| | |||||||||||||||||||||| ||||||||| | ||||  ||||||||||    
T  25398603 aaatcaaaaaacactgcacaagacaacgaacaacacactgtcgcactcaaacgataaaatcacgaa 25398538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 8266682 - 8266646
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacaca 37  Q
    |||||||||||||||||||||||||||||| ||||||    
T  8266682 aaatcaaacaacgccgcacaagacaacgaataacaca 8266646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 124
Target Start/End: Original strand, 11321560 - 11321657
Alignment:
Q  26 acgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaa-cttgatgtatgtgaaaatcacttatttaaattgaaagaaa 124  Q
    |||||||||||||   |||||||||||||||||||||  ||  | |||  ||||||||| ||| || |||||||||| |||||||||| |||||||||||    
T  11321560 acgaacaacacaacaccgcactaagacgacgaaatcataaattacaca--aaagaaaaaacttaatatatgtgaaaaccacttatttagattgaaagaaa 11321657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 31852272 - 31852316
Alignment:
Q  19 caagacaacgaacaacacaatgtcgcactaagacgacgaaatcac 63  Q
    |||||| ||||||||||||| |||||||| |||||||||||||||    
T  31852272 caagacgacgaacaacacaacgtcgcactcagacgacgaaatcac 31852316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 33543657 - 33543693
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacaca 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  33543657 aaatcaaacaacgccgcacaagacgacgaacaacaca 33543693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 124
Target Start/End: Complemental strand, 679125 - 679006
Alignment:
Q  6 aaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaa-agaaacacgaaagaaaaacttgatgtatgtgaaaatca 104  Q
    |||| |||||||| ||||  ||||||||||| |||  |||||   |||||||||||||||| | ||| |  ||  ||||||||||| ||||||||||||     
T  679125 aaactacgccgcataagatgacgaacaacactatgctgcactcgaacgacgaaatcacgaagaaaaaaaacaagaaaaaacttgatatatgtgaaaatcg 679026  T
Q  105 cttatttaaattgaaagaaa 124  Q
     ||||||| |||||||||||    
T  679025 gttatttagattgaaagaaa 679006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 8644399 - 8644336
Alignment:
Q  9 caacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    ||||||||||||| ||| || |||| |||||||||||||||||| ||| ||||||| |||||||    
T  8644399 caacgccgcacaaagacgaccaacagcacaatgtcgcactaagatgacaaaatcacaaaagaaa 8644336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 27097863 - 27097918
Alignment:
Q  192 atgagtgaaagaggaagaaaacttagagagaaaacaaagtttctctcactgaaaaa 247  Q
    ||||||||||||| ||||||||||||||||||    |||||||||||||| |||||    
T  27097863 atgagtgaaagagaaagaaaacttagagagaatgtgaagtttctctcactaaaaaa 27097918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 5417155 - 5417213
Alignment:
Q  6 aaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcac 63  Q
    |||||||||||||||| ||| ||||||||  ||| ||||||| ||||||||||||||||    
T  5417155 aaacaacgccgcacaaagacgacgaacaaaccaacgtcgcacaaagacgacgaaatcac 5417213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 7881139 - 7881173
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  7881139 aaatcaaacaacgccgcacaagacgacgaacaaca 7881173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 8028155 - 8028189
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  8028155 aaatcaaacaacgccgcacaagacgacgaacaaca 8028189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 8196444 - 8196478
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  8196444 aaatcaaacaacgccgcacaagacgacgaacaaca 8196478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 15128114 - 15128168
Alignment:
Q  10 aacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcac 63  Q
    |||||||||||| ||| ||||||||  ||| ||||||||||||||||||||||||    
T  15128114 aacgccgcacaaagacgacgaacaaaccaacgtcgcactaagacgacgaaatcac 15128168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 309
Target Start/End: Complemental strand, 16895241 - 16895199
Alignment:
Q  267 aagtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    |||||||||||| ||||||| || |||||||||||||||||||    
T  16895241 aagtttcgtcaattatcccccgaaattaacaaaacttcaatta 16895199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 23947355 - 23947389
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  23947355 aaatcaaacaacgccgcacaagacgacgaacaaca 23947389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 25064276 - 25064242
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  25064276 aaatcaaacaacgccgcacaagacgacgaacaaca 25064242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 27097683 - 27097749
Alignment:
Q  2 aatcaaacaacgccgcacaagacaacgaac-aacacaatgtcgcactaagacgacgaaatcacgaaa 67  Q
    |||||||||||| |||||||||| |||||| ||||||||| ||| ||  |||| |||||||||||||    
T  27097683 aatcaaacaacgtcgcacaagacgacgaacaaacacaatgccgctctcggacggcgaaatcacgaaa 27097749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 124
Target Start/End: Original strand, 24227858 - 24227899
Alignment:
Q  83 aacttgatgtatgtgaaaatcacttatttaaattgaaagaaa 124  Q
    |||||||| |||||||||| ||||||||||| ||||||||||    
T  24227858 aacttgatatatgtgaaaaccacttatttaagttgaaagaaa 24227899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 90
Target Start/End: Original strand, 29319953 - 29320033
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgat 90  Q
    ||||||||| ||||  ||||||||||||| | |||||| ||||||| ||||||| ||| |||||| ||| ||||||||||||    
T  29319953 aacgccgcataagaggacgaacaacacaacgccgcacttagacgacaaaatcac-aaaaaaacacaaaaggaaaaacttgat 29320033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 120
Target Start/End: Complemental strand, 13436745 - 13436717
Alignment:
Q  92 tatgtgaaaatcacttatttaaattgaaa 120  Q
    |||||||||||||||||||||||||||||    
T  13436745 tatgtgaaaatcacttatttaaattgaaa 13436717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 30608718 - 30608757
Alignment:
Q  144 agaggggtgattctaggtcaaaaattgacctaaaatcatcc 184  Q
    |||||||||||||||||||||||| |||||||||| |||||    
T  30608718 agaggggtgattctaggtcaaaaa-tgacctaaaaccatcc 30608757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 34489290 - 34489254
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacaca 37  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  34489290 aaatcaaacaacgtcgcacaagacgacgaacaacaca 34489254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 133; Significance: 4e-69; HSPs: 84)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 18890770 - 18891013
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaa 100  Q
    ||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||    
T  18890770 aaatcaaacaacgtcgcacaagacgacgaacaacacaacgtcgcactaagacgacgaaatcacgaaa-aaacacaaaagaaaaacttgatgcatgtgaaa 18890868  T
Q  101 atcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaa 200  Q
    |||||||||||| ||||||||||| |||||        ||| |||| | |||||||||||||||||||||||||||||||| ||||  ||||| ||||||    
T  18890869 atcacttatttagattgaaagaaaggggaa----aaaagatgcagatgagtgattctaggtcaaaaattgacctaaaatcaccccttctcgataagtgaa 18890964  T
Q  201 agaggaagaaaacttagagagaaaacaaagtttctctcactgaaaaatta 250  Q
    |||||||||||||||| | |||| | ||||||||||||||| ||||||||    
T  18890965 agaggaagaaaacttaaaaagaaga-aaagtttctctcactaaaaaatta 18891013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 41896535 - 41896290
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaa 100  Q
    |||||||||||||||||||||||| || |||||||||| |||| |||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||    
T  41896535 aaatcaaacaacgccgcacaagacgaccaacaacacaacgtcgtactaagacgatgaaatcacgaaa-aaacacgaaagaaaaacttgatggatgtgaaa 41896437  T
Q  101 atcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaa 200  Q
    |||||||||||| ||||||||||| |||||         || || | ||||||||||||||||||||||||||||||||||  | |  ||||||||||||    
T  41896436 atcacttatttagattgaaagaaa-gggaa------aaaatgcaaatgggtgattctaggtcaaaaattgacctaaaatcactcatcctcgatgagtgaa 41896344  T
Q  201 ag----aggaagaaaacttagagagaaaacaaagtttctctcactgaaaaatta 250  Q
    ||    ||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  41896343 agaggaaggaagaaaacttagagagaatacaaagtttctctcactaaaaaatta 41896290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 7 - 240
Target Start/End: Complemental strand, 14585718 - 14585492
Alignment:
Q  7 aacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaaatcact 106  Q
    |||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  14585718 aacaacgccgcacaagacgacgaacaacacaacgtcgcgctaagacgacgaaatcaagaaa-aaacacgaaagaaaaacttgatgtatgtgaaaatcact 14585620  T
Q  107 tatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagagga 206  Q
    |||||| ||||||||||| | |||        ||| ||||||||||||||||||||||   |||||   |||||| || |  ||||||||||||||||||    
T  14585619 tatttagattgaaagaaaagagaa---aaaaagatgcagaggggtgattctaggtcaatttttgac---aaatcacccatcctcgatgagtgaaagagga 14585526  T
Q  207 agaaaacttagagagaaaacaaagtttctctcac 240  Q
    ||||||||||||||||| ||| ||||||||||||    
T  14585525 agaaaacttagagagaagacagagtttctctcac 14585492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 24099322 - 24099567
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaaga---aacacgaaagaaaa-acttgatgtatgt 96  Q
    |||||||||||||| | ||| ||| ||||||||||||| |||||||| ||||||||||||||||||  |   ||||  |||||||| ||||||| |||||    
T  24099322 aaatcaaacaacgcggtacaggacgacgaacaacacaacgtcgcactcagacgacgaaatcacgaagaataaaacaaaaaagaaaacacttgatctatgt 24099421  T
Q  97 gaaaatcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgag 196  Q
    | ||||||||||||||||| ||||||||  ||||         || ||||||||||||||||||||||||| |||||||||  || ||||| |||||||     
T  24099422 ggaaatcacttatttaaatcgaaagaaagaggaa----acaaaatgcagaggggtgattctaggtcaaaaa-tgacctaaagcca-ccctactcgatgat 24099515  T
Q  197 tgaaagaggaagaaaacttagagagaaaacaaagtttctctcactgaaaaat 248  Q
    |||||||| |||||||| |||||||||    |||||||||||||| ||||||    
T  24099516 tgaaagagaaagaaaacctagagagaagttgaagtttctctcactaaaaaat 24099567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 1239463 - 1239709
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcac---gaaagaaacacgaaagaaaa-acttgatgtatgt 96  Q
    |||||||||||||||||||||||| | ||||||||||| |||||||| |||||||||||||||    ||| |||||| |||||||| || |||| | |||    
T  1239463 aaatcaaacaacgccgcacaagacgatgaacaacacaaggtcgcacttagacgacgaaatcacaaaaaaaaaaacacaaaagaaaacacctgatatttgt 1239562  T
Q  97 gaaaatcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgag 196  Q
    |||||||||||||||| || ||| |||| |||||        ||| ||||||||||||| ||||||||| |  ||||||||| || ||||  ||||||||    
T  1239563 gaaaatcacttatttagatcgaacgaaaggggaa----aaaagatgcagaggggtgattttaggtcaaagaaggacctaaaaccacccctcctcgatgag 1239658  T
Q  197 tgaaagaggaagaaaacttagagagaaaacaaagtttctctcactgaaaaa 247  Q
     | ||||| | ||||||||||||||||    |||||||||||||| |||||    
T  1239659 cggaagagaaggaaaacttagagagaagttgaagtttctctcacttaaaaa 1239709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 39657472 - 39657387
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaactt 87  Q
    |||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  39657472 aaatcaaacaacgccgcacaagacgacgaacaatacaacgtcgcactaagacgacgaaatcacgaaa-aaacacgaaagaaaaactt 39657387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 7883314 - 7883426
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaaatcacttat 109  Q
    ||||||||||||||| ||||||||||||| | |||||| ||| ||||||||||| |||  ||||| |||||||||||||||  ||||||||| |||||||    
T  7883314 aacgccgcacaagacgacgaacaacacaacgccgcacttagatgacgaaatcacaaaa--aacacaaaagaaaaacttgatagatgtgaaaaccacttat 7883411  T
Q  110 ttaaattgaaagaaa 124  Q
    ||| |||||||||||    
T  7883412 ttagattgaaagaaa 7883426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 3240402 - 3240282
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaa-acttgatgtatgtgaa 99  Q
    ||||||||||||| || ||||||| |||||||||||||||  | ||  ||||||||||||||||||| |||||| |||||||| ||||||| |||||| |    
T  3240402 aaatcaaacaacgtcgtacaagacgacgaacaacacaatgatgtacacagacgacgaaatcacgaaa-aaacacaaaagaaaacacttgatatatgtgga 3240304  T
Q  100 aatcacttatttaaattgaaag 121  Q
    ||||||||||||| ||||||||    
T  3240303 aatcacttatttagattgaaag 3240282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 1236763 - 1236825
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcac 63  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  1236763 aaatcaaacaacgccgcacaagacaacgaacaacacaaggtcgcacttagacgacgaaatcac 1236825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 15344331 - 15344113
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaa-acttgatgtatgtgaa 99  Q
    ||||||||| |||||||||||||| ||||||||||||| || ||||| ||||||| |||| || ||| || ||| ||||||||  |||||| | ||||||    
T  15344331 aaatcaaactacgccgcacaagacgacgaacaacacaaggttgcacttagacgacaaaattac-aaaaaatcacaaaagaaaacgcttgatatttgtgaa 15344233  T
Q  100 aatcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtga 199  Q
    ||||||||||||| ||  | | ||| |||||        ||| ||||||||| ||| ||||||||| | |||||||||| || ||||  |||||||||||    
T  15344232 aatcacttatttagatccatataaaggggaa----aaaagatgcagaggggtaattttaggtcaaagaatgacctaaaaccacccctcctcgatgagtga 15344137  T
Q  200 aagaggaagaaaacttagagagaa 223  Q
    ||||| |  |||||||||||||||    
T  15344136 aagagaagaaaaacttagagagaa 15344113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 15433396 - 15433178
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaa-acttgatgtatgtgaa 99  Q
    ||||||||| |||||||||||||| ||||||||||||| || ||||| ||||||| |||| || ||| || ||| ||||||||  |||||| | ||||||    
T  15433396 aaatcaaactacgccgcacaagacgacgaacaacacaaggttgcacttagacgacaaaattac-aaaaaatcacaaaagaaaacgcttgatatttgtgaa 15433298  T
Q  100 aatcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtga 199  Q
    ||||||||||||| ||  | | ||| |||||        ||| ||||||||| ||| ||||||||| | |||||||||| || ||||  |||||||||||    
T  15433297 aatcacttatttagatccatataaaggggaa----aaaagatgcagaggggtaattttaggtcaaagaatgacctaaaaccacccctcctcgatgagtga 15433202  T
Q  200 aagaggaagaaaacttagagagaa 223  Q
    ||||| |  |||||||||||||||    
T  15433201 aagagaagaaaaacttagagagaa 15433178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 15524700 - 15524482
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaa-acttgatgtatgtgaa 99  Q
    ||||||||| |||||||||||||| ||||||||||||| || ||||| ||||||| |||| || ||| || ||| ||||||||  |||||| | ||||||    
T  15524700 aaatcaaactacgccgcacaagacgacgaacaacacaaggttgcacttagacgacaaaattac-aaaaaatcacaaaagaaaacgcttgatatttgtgaa 15524602  T
Q  100 aatcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtga 199  Q
    ||||||||||||| ||  | | ||| |||||        ||| ||||||||| ||| ||||||||| | |||||||||| || ||||  |||||||||||    
T  15524601 aatcacttatttagatccatataaaggggaa----aaaagatgcagaggggtaattttaggtcaaagaatgacctaaaaccacccctcctcgatgagtga 15524506  T
Q  200 aagaggaagaaaacttagagagaa 223  Q
    ||||| |  |||||||||||||||    
T  15524505 aagagaagaaaaacttagagagaa 15524482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 124
Target Start/End: Original strand, 20559820 - 20559932
Alignment:
Q  13 gccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcacttattt 111  Q
    |||||||||||| |||||||||| || |  ||||| ||||||||||||||| ||| ||| || |||| |||||||||||  |||||||||||||||||||    
T  20559820 gccgcacaagacgacgaacaacaaaacgatgcacttagacgacgaaatcacaaaaaaaatacaaaaggaaaaacttgatagatgtgaaaatcacttattt 20559919  T
Q  112 aaattgaaagaaa 124  Q
    | |||||||||||    
T  20559920 agattgaaagaaa 20559932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 124
Target Start/End: Original strand, 20571382 - 20571494
Alignment:
Q  13 gccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcacttattt 111  Q
    |||||||||||| |||||||||| || |  ||||| ||||||||||||||| ||| ||| || |||| |||||||||||  |||||||||||||||||||    
T  20571382 gccgcacaagacgacgaacaacaaaacgatgcacttagacgacgaaatcacaaaaaaaatacaaaaggaaaaacttgatagatgtgaaaatcacttattt 20571481  T
Q  112 aaattgaaagaaa 124  Q
    | |||||||||||    
T  20571482 agattgaaagaaa 20571494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 124
Target Start/End: Original strand, 27498442 - 27498550
Alignment:
Q  15 cgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaaatcacttatttaaa 114  Q
    |||||||||| ||||||||||||||| | |||| |||||||||||| || ||| | | |  || |||||||||||| ||||| |||||||||||||||||    
T  27498442 cgcacaagacgacgaacaacacaatggcacacttagacgacgaaattacaaaatacataa-aaggaaaaacttgatatatgtaaaaatcacttatttaaa 27498540  T
Q  115 ttgaaagaaa 124  Q
    ||||||||||    
T  27498541 ttgaaagaaa 27498550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 215
Target Start/End: Original strand, 40619153 - 40619345
Alignment:
Q  17 cacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaaatcacttatttaaatt 116  Q
    |||||||| || |||||||||| | |||||| |||||| |||||||| ||| | |||  ||||||||||||||| ||||||||||||||||||||| |||    
T  40619153 cacaagacgacaaacaacacaacgccgcacttagacgatgaaatcacaaaaaacacaa-aaagaaaaacttgatatatgtgaaaatcacttatttagatt 40619251  T
Q  117 gaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaagaaaactt 215  Q
    || ||||| | |||         ||  |||||| ||||||||||||||||| ||||||||| |||||| | |||||||| | || ||| ||||||||||    
T  40619252 gatagaaaagagaa----aaaatatgtagagggatgattctaggtcaaaaa-tgacctaaattcatccatcttcgatgaataaaggagaaagaaaactt 40619345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 5917698 - 5917765
Alignment:
Q  5 caaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    ||||||||| ||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  5917698 caaacaacgtcgcacaaagacgacgaacaacacaacgtcgcactaagacgacgaaatcacgaaagaaa 5917765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 130
Target Start/End: Original strand, 8443579 - 8443713
Alignment:
Q  2 aatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatc------acgaaagaaacacgaaagaaaaacttgatgtatg 95  Q
    ||||||||||||||||||||||| |||||||||||||   |||||| |||||||||||||      |  ||| |||||| |||||||| || ||| ||||    
T  8443579 aatcaaacaacgccgcacaagacgacgaacaacacaacaccgcacttagacgacgaaatcataaaaaaaaaaaaaacacaaaagaaaacctggatatatg 8443678  T
Q  96 tgaaaatcacttatttaaattgaaagaaatgggaa 130  Q
    || |||||||||||||| || |||||||| |||||    
T  8443679 tggaaatcacttatttagatcgaaagaaaggggaa 8443713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 15827168 - 15827101
Alignment:
Q  5 caaacaacgccgcacaag-acaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    ||||||||| |||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  15827168 caaacaacgacgcacaagtacaacgaacaaaacaacgtcgcactaagacgacgaaatcacgaaagaaa 15827101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 8 - 204
Target Start/End: Complemental strand, 8826227 - 8826034
Alignment:
Q  8 acaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcact 106  Q
    |||||||| |||||||| |||||||||| || |  ||||| ||||||||||||||||||| |||||  |||| ||||||||||| | ||| |||||||||    
T  8826227 acaacgccacacaagacgacgaacaacataacgctgcactcagacgacgaaatcacgaaaaaaaca--aaagaaaaaacttgatatgtgtaaaaatcact 8826130  T
Q  107 tatttaaattgaaagaaatgggaagnnnnnnngatacaga-ggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagag 204  Q
    |||||| || |||| ||| ||| |        |||||| | ||||||||||||| ||||||| |||||||||| || || |  ||||||||||||||||    
T  8826129 tatttagatcgaaataaaggggga---aaaaagatacaaagggggtgattctagatcaaaaaatgacctaaaaccacccatcctcgatgagtgaaagag 8826034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 10 - 130
Target Start/End: Original strand, 20553314 - 20553438
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa---cacgaaag-aaaaacttgatgtatgtgaaaatcac 105  Q
    ||||||||| ||||| |||||||||| || | |||||| ||||||||||||||| ||| |||   ||| |||| |||||||| ||  |||||||||||||    
T  20553314 aacgccgcataagacgacgaacaacaaaacgccgcacttagacgacgaaatcacaaaaaaaaaaacacaaaaggaaaaacttcatagatgtgaaaatcac 20553413  T
Q  106 ttatttaaattgaaagaaatgggaa 130  Q
    ||||||| ||||||||||| |||||    
T  20553414 ttatttagattgaaagaaaagggaa 20553438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 164 - 250
Target Start/End: Complemental strand, 39655377 - 39655291
Alignment:
Q  164 aaaattgacctaaaatcatccctattcgatgagtgaaagaggaagaaaacttagagagaaaacaaagtttctctcactgaaaaatta 250  Q
    |||||||||||||||||| |  |  ||||| |||||||||| |||||||||||||||||| | | ||||||||||||||||||||||    
T  39655377 aaaattgacctaaaatcacctttcctcgataagtgaaagagaaagaaaacttagagagaagatagagtttctctcactgaaaaatta 39655291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 23230659 - 23230547
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||| |||||||||| |  | |||||| |||||||||||||||   | |||||| |||| |||||||||||  || |||||| ||||||    
T  23230659 aacgccgcacaagacgacgaacaacaaatcgccgcacttagacgacgaaatcac---aaaaacacaaaagaaaaaacttgatagatatgaaaaccactta 23230563  T
Q  109 tttaaattgaaagaaa 124  Q
    |||| |||||||||||    
T  23230562 tttagattgaaagaaa 23230547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 178
Target Start/End: Complemental strand, 37971299 - 37971144
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaaatcacttat 109  Q
    ||||||||||||||| |||||||||| || | |||||| ||||||||||||||| ||||          ||| |||||| |  |||||||||||||||||    
T  37971299 aacgccgcacaagacgacgaacaacaaaacgccgcacttagacgacgaaatcacaaaag----------gaacaacttggtagatgtgaaaatcacttat 37971210  T
Q  110 ttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaa 178  Q
    ||| ||||||||||| ||| |        |||  |||||||||||||||||||||||| ||||||||||    
T  37971209 ttagattgaaagaaaagggga---aaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaa 37971144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 130
Target Start/End: Original strand, 45445884 - 45446004
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaaatcacttat 109  Q
    ||||||||||||||| |||||||| |||| |||| ||| ||||||||||||||  |||  || |  ||  ||||||||||| | |||||||| ||||||     
T  45445884 aacgccgcacaagacgacgaacaatacaacgtcgtacttagacgacgaaatcaaaaaaacaaaaaaaagaaaaaacttgatatgtgtgaaaaccacttaa 45445983  T
Q  110 ttaaattgaaagaaatgggaa 130  Q
    ||||||||||| ||| |||||    
T  45445984 ttaaattgaaataaaagggaa 45446004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 223
Target Start/End: Complemental strand, 8981081 - 8981004
Alignment:
Q  146 aggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaagaaaacttagagagaa 223  Q
    |||||||||| ||||||||||| |||||||||| || ||||  |||| ||||||| ||| | ||||||||||||||||    
T  8981081 aggggtgattttaggtcaaaaaatgacctaaaaccacccctcctcgacgagtgaatgagaacgaaaacttagagagaa 8981004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 224
Target Start/End: Original strand, 7677362 - 7677563
Alignment:
Q  16 gcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaaatcacttatttaaat 115  Q
    ||||||||| ||||||||||||| | |||| | |||||| |||||||| |||   |||| |||  |||||||||| ||||||||||  | ||||||| ||    
T  7677362 gcacaagacgacgaacaacacaacgccgcaattagacgatgaaatcacaaaa---acacaaaaacaaaacttgatatatgtgaaaacaatttatttagat 7677458  T
Q  116 tgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaagaaaactt 215  Q
     ||||||||    |||       |||  |||||||||||||||||||||||| |||||||||| || ||||  || ||||  |||  || ||||||| ||    
T  7677459 cgaaagaaa----aagtgaatgagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcaatgaacgaagaagaaagaaaattt 7677554  T
Q  216 agagagaaa 224  Q
    |||||||||    
T  7677555 agagagaaa 7677563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 181
Target Start/End: Original strand, 25191140 - 25191306
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaa-cttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||| ||||||||||||| |  | ||| |||| ||||||| || ||| ||  |  | ||||||| |||||| |  ||||||||||||||    
T  25191140 aacgccgcacaagacgacgaacaacacaacgctgtacttagacaacgaaattacaaaaaaagaaaaatagaaaaaacttgattt--gtgaaaatcactta 25191237  T
Q  109 tttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatca 181  Q
    ||||| |||||||||| |||||        |||  ||| |||||||||||||||||||| |||||||||||||    
T  25191238 tttaatttgaaagaaaagggaa----aaaagatgtagatgggtgattctaggtcaaaaaatgacctaaaatca 25191306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 10042914 - 10042863
Alignment:
Q  20 aagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    |||||||||||||| |||| || |||||||||||||||||||| ||||||||    
T  10042914 aagacaacgaacaaaacaacgttgcactaagacgacgaaatcatgaaagaaa 10042863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 12244172 - 12244239
Alignment:
Q  5 caaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    ||||||||||||||||| |   |||||||| |||| |||||||||||| |||||||||||||||||||    
T  12244172 caaacaacgccgcacaaagttgacgaacaaaacaacgtcgcactaagatgacgaaatcacgaaagaaa 12244239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 12248670 - 12248729
Alignment:
Q  5 caaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcac 63  Q
    ||||||||| ||||||| ||| |||||||| |||| ||||||||||||||||||||||||    
T  12248670 caaacaacgtcgcacaaagacgacgaacaaaacaaggtcgcactaagacgacgaaatcac 12248729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 27534368 - 27534423
Alignment:
Q  5 caaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaa 59  Q
    ||||||||||||||||| ||| || ||||| |||||||||||||||||||||||||    
T  27534368 caaacaacgccgcacaaagacgacaaacaaaacaatgtcgcactaagacgacgaaa 27534423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 144 - 223
Target Start/End: Original strand, 31013774 - 31013853
Alignment:
Q  144 agaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaagaaaacttagagagaa 223  Q
    |||||||||||||||||||||||| |||||||||| || ||||  |||||||  ||| ||| ||||||  ||||||||||    
T  31013774 agaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagagaa 31013853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 43834064 - 43834186
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaa 100  Q
    |||||||| || ||| ||||||||   ||||||||||| |  ||||| |||||| ||||| |||||| |||||| |||| | | |||||| |||||| |     
T  43834064 aaatcaaaaaatgccacacaagacggggaacaacacaacgcggcacttagacgatgaaattacgaaaaaaacacaaaaggaca-cttgatatatgtggat 43834162  T
Q  101 atcacttatttaaattgaaagaaa 124  Q
    |||||||||||| |||||||||||    
T  43834163 atcacttatttagattgaaagaaa 43834186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 309
Target Start/End: Original strand, 25849 - 25891
Alignment:
Q  267 aagtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    |||||||||||| |||||||||| |||||||||||||||||||    
T  25849 aagtttcgtcaattatcccctgaaattaacaaaacttcaatta 25891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 130
Target Start/End: Complemental strand, 5046700 - 5046646
Alignment:
Q  76 aaagaaaaacttgatgtatgtgaaaatcacttatttaaattgaaagaaatgggaa 130  Q
    |||| |||||||||| | ||||||||||||||||||||||| ||||||| |||||    
T  5046700 aaagtaaaacttgatatgtgtgaaaatcacttatttaaattaaaagaaaggggaa 5046646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 5333451 - 5333346
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaa 100  Q
    |||||||||||| ||||||||||| |||||||||||||   |||||| ||| |||||||||  |||| ||| || |||  |||||||||| |||||  ||    
T  5333451 aaatcaaacaacaccgcacaagacgacgaacaacacaacaccgcactcagatgacgaaatcttgaaa-aaatacaaaaataaaacttgatatatgtataa 5333353  T
Q  101 atcactt 107  Q
    |||||||    
T  5333352 atcactt 5333346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 23766897 - 23766823
Alignment:
Q  5 caaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa 78  Q
    ||||||||| ||||||| ||| |||||||| | ||| ||||| ||||| ||||||||||||||||||| ||||||    
T  23766897 caaacaacgtcgcacaaagacgacgaacaaaataatttcgcattaagatgacgaaatcacgaaagaaaaacgaaa 23766823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 130
Target Start/End: Original strand, 33214774 - 33214824
Alignment:
Q  80 aaaaacttgatgtatgtgaaaatcacttatttaaattgaaagaaatgggaa 130  Q
    |||||||| || |||| |||||||||||||||||||||||||||| |||||    
T  33214774 aaaaacttaatatatgcgaaaatcacttatttaaattgaaagaaaagggaa 33214824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 39646254 - 39646316
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcac 63  Q
    ||||||||||||||||||||||||  |||||||||||||||| || | | ||| |||||||||    
T  39646254 aaatcaaacaacgccgcacaagaccgcgaacaacacaatgtcacaatcatacgtcgaaatcac 39646316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 124
Target Start/End: Original strand, 40211385 - 40211491
Alignment:
Q  20 aagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa-cacgaaagaaaa-acttgatgtatgtgaaaatcacttatttaaattg 117  Q
    ||||| ||||||||||||| | | || | ||||||||||||||| ||| ||| ||| |||||||| |||||||  ||||||||| | |||||||| ||||    
T  40211385 aagacgacgaacaacacaacgccacatttagacgacgaaatcacaaaaaaaaacacaaaagaaaatacttgatagatgtgaaaaccgcttatttagattg 40211484  T
Q  118 aaagaaa 124  Q
    |||||||    
T  40211485 aaagaaa 40211491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 20227347 - 20227412
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaa 66  Q
    ||||||||||||| |||| ||||| |||||||| |||| | |||||| |||||| |||||||||||    
T  20227347 aaatcaaacaacgtcgcagaagacgacgaacaatacaacgacgcactcagacgatgaaatcacgaa 20227412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 71
Target Start/End: Complemental strand, 37719983 - 37719942
Alignment:
Q  30 acaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    |||| |||| ||||||||||||||||||||||||||||||||    
T  37719983 acaaaacaacgtcgcactaagacgacgaaatcacgaaagaaa 37719942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 247
Target Start/End: Original strand, 1236895 - 1236999
Alignment:
Q  143 cagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaagaaaacttagagagaaaacaaagtttctctcactg 242  Q
    ||||||| | ||| ||||||||| | |||||||||| || ||||  || ||||| ||||||| | ||||||||||||||||    ||||||||||||||     
T  1236895 cagagggattattttaggtcaaagaatgacctaaaaccacccctcctcaatgagcgaaagagaaggaaaacttagagagaagttgaagtttctctcacta 1236994  T
Q  243 aaaaa 247  Q
    |||||    
T  1236995 aaaaa 1236999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 8867708 - 8867636
Alignment:
Q  151 tgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaagaaaacttagagagaa 223  Q
    ||||||||| ||||||| |||| ||||||||  | || ||||||  |||||||| ||||||||||||||||||    
T  8867708 tgattctagatcaaaaaatgacttaaaatcactcatactcgatggatgaaagagaaagaaaacttagagagaa 8867636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 14919356 - 14919416
Alignment:
Q  11 acgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    ||||||||||| || || ||||| | |||||||||||||||||||||||||  ||||||||    
T  14919356 acgccgcacaaaacgacaaacaaaataatgtcgcactaagacgacgaaatcttgaaagaaa 14919416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 18190800 - 18190864
Alignment:
Q  5 caaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaag 68  Q
    ||||||||| ||||||| |||||| ||||| |||  |||||||||||||||||||||||| ||||    
T  18190800 caaacaacgtcgcacaaagacaacaaacaaaacagggtcgcactaagacgacgaaatcacaaaag 18190864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 120
Target Start/End: Original strand, 26469339 - 26469379
Alignment:
Q  80 aaaaacttgatgtatgtgaaaatcacttatttaaattgaaa 120  Q
    ||||||||||| ||||||||||||||||||||| |||||||    
T  26469339 aaaaacttgatatatgtgaaaatcacttatttagattgaaa 26469379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 223
Target Start/End: Complemental strand, 3673331 - 3673253
Alignment:
Q  144 agaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaagaaaacttagagagaa 223  Q
    |||||| ||||||||||||||||| |||||||||| || |||| |||||||| | || ||| ||||||  ||||||||||    
T  3673331 agagggatgattctaggtcaaaaa-tgacctaaaaccaaccctcttcgatgaataaaggagaaagaaagtttagagagaa 3673253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 13977544 - 13977493
Alignment:
Q  20 aagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    ||||| |||||||| ||||||||||||||| | |||||||||| ||||||||    
T  13977544 aagacgacgaacaaaacaatgtcgcactaaaatgacgaaatcaagaaagaaa 13977493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 15665697 - 15665630
Alignment:
Q  5 caaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    |||||||||| |||||| ||| || ||||||||||  || ||||||||||||||||||| ||||||||    
T  15665697 caaacaacgctgcacaaagacgacaaacaacacaacatctcactaagacgacgaaatcatgaaagaaa 15665630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 16938227 - 16938294
Alignment:
Q  5 caaacaacgccgcacaag-acaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    |||||||||| ||||||  || |||||||  |||| ||||||||||||||||||||||| ||||||||    
T  16938227 caaacaacgcagcacaaatacgacgaacacaacaaagtcgcactaagacgacgaaatcatgaaagaaa 16938294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 32724518 - 32724636
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaa 100  Q
    |||||||||||||||||||||||| |||||||||| |    | || | ||| || |||||||  ||||||| |  ||| |||| || ||| |||||||||    
T  32724518 aaatcaaacaacgccgcacaagacgacgaacaacaaaccaccacagttagatgatgaaatca-taaagaaaaaacaaaaaaaatctagatctatgtgaaa 32724616  T
Q  101 atcacttatttaaattgaaa 120  Q
    |||||||||||| |||||||    
T  32724617 atcacttatttagattgaaa 32724636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 34493084 - 34493041
Alignment:
Q  4 tcaaacaacgccgcacaagacaacgaacaacacaatgtcgcact 47  Q
    ||||||||| ||||||| ||||||||||||||||| ||||||||    
T  34493084 tcaaacaacaccgcacatgacaacgaacaacacaacgtcgcact 34493041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 34609855 - 34609792
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacg 64  Q
    |||||||| |||| |||||||||| | ||||||| ||| | |||||| ||||||||||||||||    
T  34609855 aaatcaaataacgtcgcacaagacgaggaacaacccaacgccgcacttagacgacgaaatcacg 34609792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 4809011 - 4808977
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  4809011 aaatcaaacaacgccgcacaagacgacgaacaaca 4808977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 9498636 - 9498670
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaaca 35  Q
    ||||||||||| |||||||||||||||||||||||    
T  9498636 aaatcaaacaaagccgcacaagacaacgaacaaca 9498670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 9619394 - 9619428
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  9619394 aaatcaaacaacgccgcacaagacgacgaacaaca 9619428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 11196936 - 11196902
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  11196936 aaatcaaacaacgccgcacaagacgacgaacaaca 11196902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 11464218 - 11464184
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  11464218 aaatcaaacaacgccgcacaagacgacgaacaaca 11464184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 12356976 - 12356910
Alignment:
Q  6 aaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    |||||||||||| ||| ||| || ||||| ||| |||| ||||||||||||||||||| ||||||||    
T  12356976 aaacaacgccgctcaaagacgacaaacaaaacagtgtcacactaagacgacgaaatcatgaaagaaa 12356910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 309
Target Start/End: Original strand, 15730530 - 15730572
Alignment:
Q  267 aagtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    |||||||||||| || ||||||| |||||||||||||||||||    
T  15730530 aagtttcgtcaattaccccctgaaattaacaaaacttcaatta 15730572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 309
Target Start/End: Original strand, 21558793 - 21558835
Alignment:
Q  267 aagtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    |||||||||||| ||||| |||| |||||||||||||||||||    
T  21558793 aagtttcgtcaattatcctctgaaattaacaaaacttcaatta 21558835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 309
Target Start/End: Original strand, 25616882 - 25616924
Alignment:
Q  267 aagtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    |||||||||||| |||||| ||| |||||||||||||||||||    
T  25616882 aagtttcgtcaattatcccatgaaattaacaaaacttcaatta 25616924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 34611851 - 34611817
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  34611851 aaatcaaacaacgccgcacaagacgacgaacaaca 34611817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 43192383 - 43192417
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  43192383 aaatcaaacaacgccgcacaagacgacgaacaaca 43192417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 44099971 - 44100005
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  44099971 aaatcaaacaacgccgcacaagacgacgaacaaca 44100005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 309
Target Start/End: Complemental strand, 26980 - 26939
Alignment:
Q  268 agtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    ||||||||||| || ||||||| |||||||||||||||||||    
T  26980 agtttcgtcaattaccccctgaaattaacaaaacttcaatta 26939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 124
Target Start/End: Complemental strand, 6831580 - 6831492
Alignment:
Q  43 gcactaagacgacgaaatcacgaa------agaaacacgaaagaaaaa-cttgatgtatgtgaaaatcacttatttaaattgaaagaaa 124  Q
    ||||| ||||||||||||||||||      | |||||| ||||||||| |||||| ||||||||| |||||||||| ||| ||||||||    
T  6831580 gcactcagacgacgaaatcacgaagaaaaaaaaaacacaaaagaaaaaacttgatatatgtgaaattcacttatttgaatcgaaagaaa 6831492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 10377705 - 10377652
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcac 63  Q
    |||||||||||||||  |||||||||||| | |||||| |||| ||||||||||    
T  10377705 aacgccgcacaagacggcgaacaacacaacgccgcacttagacaacgaaatcac 10377652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 35
Target Start/End: Complemental strand, 19876257 - 19876224
Alignment:
Q  2 aatcaaacaacgccgcacaagacaacgaacaaca 35  Q
    ||||||||||||||||||||||| ||||||||||    
T  19876257 aatcaaacaacgccgcacaagacgacgaacaaca 19876224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 124
Target Start/End: Original strand, 27110605 - 27110650
Alignment:
Q  79 gaaaaacttgatgtatgtgaaaatcacttatttaaattgaaagaaa 124  Q
    |||||||||||| |||||||| | |||||||||| |||||||||||    
T  27110605 gaaaaacttgatatatgtgaagaccacttatttagattgaaagaaa 27110650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 35
Target Start/End: Complemental strand, 28239879 - 28239846
Alignment:
Q  2 aatcaaacaacgccgcacaagacaacgaacaaca 35  Q
    ||||||||||||||||||||||| ||||||||||    
T  28239879 aatcaaacaacgccgcacaagacgacgaacaaca 28239846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 29617341 - 29617378
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaa 38  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  29617341 aaatcaaacagcgccgcacaagacgacgaacaacacaa 29617378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 36532944 - 36532907
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaa 38  Q
    |||||||||||| ||||||||||| |||||||||||||    
T  36532944 aaatcaaacaacaccgcacaagacgacgaacaacacaa 36532907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 121
Target Start/End: Original strand, 44414186 - 44414227
Alignment:
Q  80 aaaaacttgatgtatgtgaaaatcacttatttaaattgaaag 121  Q
    ||||| ||||| ||||||||||||||||||||||||| ||||    
T  44414186 aaaaaattgatctatgtgaaaatcacttatttaaattaaaag 44414227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 241
Target Start/End: Original strand, 8412553 - 8412649
Alignment:
Q  146 aggggtgattctaggtcaaaaat-tgacctaaaatcatccctattcgatgagtgaaagaggaagaaaacttagagagaaaacaaagtttctctcact 241  Q
    |||||||||||||||| |||||  |||||||||| || ||||| |||||||  ||| ||| ||||||  ||||||||||   | |||||||||||||    
T  8412553 aggggtgattctaggtaaaaaaaatgacctaaaaccacccctactcgatgaacgaatgagaaagaaagtttagagagaagttagagtttctctcact 8412649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 14327637 - 14327573
Alignment:
Q  5 caaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaag 68  Q
    ||||||||| ||||||| ||| || ||||| |||| |||||||||||||||| ||||||| ||||    
T  14327637 caaacaacgtcgcacaaagacgacaaacaaaacaacgtcgcactaagacgactaaatcacaaaag 14327573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 120
Target Start/End: Complemental strand, 19876189 - 19876149
Alignment:
Q  80 aaaaacttgatgtatgtgaaaatcacttatttaaattgaaa 120  Q
    |||| |||||| ||||||||||||||||||||| |||||||    
T  19876189 aaaaccttgatctatgtgaaaatcacttatttagattgaaa 19876149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 124
Target Start/End: Original strand, 24186801 - 24186845
Alignment:
Q  80 aaaaacttgatgtatgtgaaaatcacttatttaaattgaaagaaa 124  Q
    ||||||||||| ||| ||||||||||||||||| ||| |||||||    
T  24186801 aaaaacttgatatatatgaaaatcacttatttagatttaaagaaa 24186845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 223
Target Start/End: Original strand, 29617659 - 29617739
Alignment:
Q  143 cagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaagaaaacttagagagaa 223  Q
    |||| |||||||| ||||||||||| ||||||||||  |   || |||||| |||||||||| || |||| ||||||||||    
T  29617659 cagatgggtgattgtaggtcaaaaaatgacctaaaacaacatctcttcgataagtgaaagagaaacaaaatttagagagaa 29617739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 32256677 - 32256741
Alignment:
Q  5 caaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaag 68  Q
    ||||||||| ||||||| ||| || ||||| ||||  ||||||||||||| ||||||||||||||    
T  32256677 caaacaacgtcgcacaaagacgacaaacaaaacaacatcgcactaagacggcgaaatcacgaaag 32256741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 120
Target Start/End: Complemental strand, 35580423 - 35580395
Alignment:
Q  92 tatgtgaaaatcacttatttaaattgaaa 120  Q
    |||||||||||||||||||||||||||||    
T  35580423 tatgtgaaaatcacttatttaaattgaaa 35580395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 120
Target Start/End: Original strand, 39153264 - 39153292
Alignment:
Q  92 tatgtgaaaatcacttatttaaattgaaa 120  Q
    |||||||||||||||||||||||||||||    
T  39153264 tatgtgaaaatcacttatttaaattgaaa 39153292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 133; Significance: 4e-69; HSPs: 102)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 3308971 - 3308727
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaa 100  Q
    |||||||||||||||||||||||| || || ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  3308971 aaatcaaacaacgccgcacaagacgacaaataacacaacgtcgcactaagacgacgaaatcacgaaa-aaacacgaaagaaaaacttgatgtatgtgaaa 3308873  T
Q  101 atcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaa 200  Q
    |||||||||||| ||||||| ||| |||||        ||| || |||||||||||||||||||||||||||||||||||| ||||  |||| ||||| |    
T  3308872 atcacttatttagattgaaataaaggggaa----aaaagatgcaaaggggtgattctaggtcaaaaattgacctaaaatcacccctcctcgacgagtgga 3308777  T
Q  201 agaggaagaaaacttagagagaaaacaaagtttctctcactgaaaaatta 250  Q
    ||||||| ||||||||||| ||| ||||||||| ||||| | ||||||||    
T  3308776 agaggaaaaaaacttagagggaagacaaagtttttctcagtaaaaaatta 3308727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 10237290 - 10237523
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaa 100  Q
    |||||||| ||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||           ||||||||||||||||||    
T  10237290 aaatcaaagaacgctgcacaagacgacgaacaacacaacgtcgcactaagacgacgaaatcacgaaagaaa-----------aacttgatgtatgtgaaa 10237378  T
Q  101 atcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaa 200  Q
    |||||||||||| ||||||||||| |||||        |||  |||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||    
T  10237379 atcacttatttagattgaaagaaaggggaa----aaaagatgtagaggggtgattctaggtcaaaaattgacctaaaatcacctctactcgatgagtgaa 10237474  T
Q  201 agaggaagaaaacttagagagaaaacaaagtttctctcactgaaaaatta 250  Q
    |||||||||||||||| |||| || |||||||||||||||| ||||||||    
T  10237475 agaggaagaaaacttaaagag-aagcaaagtttctctcactaaaaaatta 10237523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 14955555 - 14955346
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaa-cttgatgtatgtgaa 99  Q
    ||||||||||||||||||||| |  | ||||||||||| |||||| ||||||||| ||||||| |||  || | |||||||||| ||||||||||||| |    
T  14955555 aaatcaaacaacgccgcacaaaatgatgaacaacacaacgtcgcattaagacgacaaaatcacaaaa--aataagaaagaaaaaacttgatgtatgtgga 14955458  T
Q  100 aatcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtga 199  Q
    ||||||||||||| |||||||||||  ||||        ||| ||||||| |||||||||||||||||||||| |||||||| ||||  |||||||||||    
T  14955457 aatcacttatttagattgaaagaaagaggaa----aaaagatgcagagggatgattctaggtcaaaaattgacttaaaatcacccctcctcgatgagtga 14955362  T
Q  200 aagaggaagaaaactt 215  Q
    ||||||||||||||||    
T  14955361 aagaggaagaaaactt 14955346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 12647990 - 12648208
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaa-acttgatgtatgtgaa 99  Q
    |||||||||||||||||||||||| |||||||||||||   |||||| |||||| |||||||||||| | |||| |||||||| ||||||| |||||| |    
T  12647990 aaatcaaacaacgccgcacaagacgacgaacaacacaacaccgcacttagacgatgaaatcacgaaa-atacacaaaagaaaacacttgatatatgtgga 12648088  T
Q  100 aatcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtga 199  Q
    ||||||||||||| ||||||||||| | |||        |||   ||||||||||||||||||||||| |||||||||| || ||||  || | |||| |    
T  12648089 aatcacttatttagattgaaagaaaagagaa----aaaagatgtggaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcaacgagtaa 12648184  T
Q  200 aagaggaagaaaacttagagagaa 223  Q
    ||||| ||||||||||| ||||||    
T  12648185 aagagaaagaaaacttaaagagaa 12648208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 32448688 - 32448885
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaa-acttgatgtatgtgaa 99  Q
    ||||||||||||| |||||||||| ||||||||||||| |||||||| ||||||||||||||| ||| |||||| ||| ||||  |||||| |  |||||    
T  32448688 aaatcaaacaacggcgcacaagacgacgaacaacacaaggtcgcacttagacgacgaaatcac-aaaaaaacacaaaataaaacgcttgatattggtgaa 32448786  T
Q  100 aatcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtga 199  Q
    ||||||||||||| || |||||||| |||||        ||| ||||||||||||| ||||||||| | |||||||||| || ||||  |||||||||||    
T  32448787 aatcacttatttagatcgaaagaaaggggaa-----aaagatgcagaggggtgattttaggtcaaataatgacctaaaaccacccctcctcgatgagtga 32448881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 29574698 - 29574910
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaa-gaaacacgaaagaaaaacttgatgtatgtgaa 99  Q
    ||||||||||| |||||||||||| ||||||||||||| | ||||||  ||||||||||||||||||  |||||| ||| ||| ||||||| |||||| |    
T  29574698 aaatcaaacaatgccgcacaagacgacgaacaacacaacgccgcactcggacgacgaaatcacgaaacaaaacacaaaaaaaacacttgatatatgtgga 29574797  T
Q  100 aatcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtga 199  Q
    ||||||||||||| |||||||||||  ||||        ||| || | |||||||||||||||||||| ||| |||||| || ||||  |||| ||||||    
T  29574798 aatcacttatttagattgaaagaaaatggaa---aaaaggatgcaca-gggtgattctaggtcaaaaaatgatctaaaaccacccctcctcgacgagtga 29574893  T
Q  200 aagaggaagaaaactta 216  Q
    ||||| || ||||||||    
T  29574894 aagagaaataaaactta 29574910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 37994309 - 37994090
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaa-agaaacacgaaagaaaa-acttgatgtatgtga 98  Q
    ||||||||||| |||| ||| ||  ||||||||||||| | |||||| |||| ||||||||||||| | ||| ||  ||||||| ||||||| |||||||    
T  37994309 aaatcaaacaatgccgtacaggaagacgaacaacacaacgccgcactcagacaacgaaatcacgaagataaaaacacaagaaaacacttgatctatgtga 37994210  T
Q  99 aaatcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtg 198  Q
    ||||||||||||||||| |||||||| |||||         || ||||||||||||||||||||||||| |||||||||| || || |  ||||||| ||    
T  37994209 aaatcacttatttaaatcgaaagaaaggggaa----acaaaatgcagaggggtgattctaggtcaaaaa-tgacctaaaaccacccttcctcgatgattg 37994115  T
Q  199 aaagaggaagaaaacttagagagaa 223  Q
    |||||| |||||||| |||||||||    
T  37994114 aaagagaaagaaaacctagagagaa 37994090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 10 - 195
Target Start/End: Original strand, 43397195 - 43397375
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaa-acttgatgtatgtgaaaatcactta 108  Q
    |||||| |||||||| ||||||||||||| | | |||| ||||||||||||||||||| |||||| |||||||| ||||||| |||||||||| ||||||    
T  43397195 aacgccacacaagacgacgaacaacacaacgccacacttagacgacgaaatcacgaaa-aaacacaaaagaaaaaacttgatatatgtgaaaaccactta 43397293  T
Q  109 tttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatga 195  Q
    |||| ||||||||||| |||||        |||  |||| ||||||||||||||||||| |||||||||| || ||||  |||||||    
T  43397294 tttagattgaaagaaaagggaa-----aaagatgtagagaggtgattctaggtcaaaaaatgacctaaaaccaccccttctcgatga 43397375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 6358943 - 6359073
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaa 99  Q
    |||||||||||||| ||||||||| ||||||||||||| | | |||| ||||||| ||||||||||| |||||| || | ||||||||||| |||||  |    
T  6358943 aaatcaaacaacgctgcacaagacgacgaacaacacaacgacacactcagacgacaaaatcacgaaa-aaacacaaaggaaaaaacttgatatatgtaga 6359041  T
Q  100 aatcacttatttaaattgaaagaaatgggaag 131  Q
    || |||||||||||||||||||||||||||||    
T  6359042 aaacacttatttaaattgaaagaaatgggaag 6359073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 10 - 178
Target Start/End: Complemental strand, 31788481 - 31788316
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcactta 108  Q
    |||||||||||||||||||||||||| || |||||||| |||||||||||| || ||| |||||| ||| ||| ||||||||  ||||||||||||||||    
T  31788481 aacgccgcacaagacaacgaacaacaaaacgtcgcacttagacgacgaaattac-aaaaaaacacaaaaggaacaacttgatagatgtgaaaatcactta 31788383  T
Q  109 tttaaattgaaag-aaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaa 178  Q
    |||| |||||||| |||||||||        |||  |||||||||||||||||||||||| | ||||||||    
T  31788382 tttagattgaaagaaaatgggaa----aaaagatgtagaggggtgattctaggtcaaaaaattacctaaaa 31788316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 11985306 - 11985419
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcactta 108  Q
    |||||||||||||||||| |||||||||| | |||||| |||||||||||||||  || | |||| |||| ||||||||||| |||||||||| ||||||    
T  11985306 aacgccgcacaagacaacaaacaacacaaagccgcacttagacgacgaaatcac--aaaacacacaaaagaaaaaacttgatatatgtgaaaaccactta 11985403  T
Q  109 tttaaattgaaagaaa 124  Q
    ||||||||||||||||    
T  11985404 tttaaattgaaagaaa 11985419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 10 - 223
Target Start/End: Complemental strand, 4099127 - 4098918
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||||||||||||||||| | |||||| |||||||||||| ||  || |||||| ||| ||||||||||||  ||||||||| ||||||    
T  4099127 aacgccgcacaagacaacgaacaacacaacgccgcacttagacgacgaaattac--aaaaaacacaaaaggaaaaacttgatagatgtgaaaaccactta 4099030  T
Q  109 tttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaag 208  Q
    |||| ||||||||||| ||| |        |||  ||| |||||||||||||||||||| |||||||||  || || |  |||||||  ||||||| |||    
T  4099029 tttagattgaaagaaaagggga---aaaaagatgtagatgggtgattctaggtcaaaaaatgacctaaagccacccttcctcgatgaaggaaagagaaag 4098933  T
Q  209 aaaacttagagagaa 223  Q
    |||  ||||||||||    
T  4098932 aaagtttagagagaa 4098918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 10 - 178
Target Start/End: Complemental strand, 18763492 - 18763328
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaaga-aaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||| |||||||||||||   |||||| |||||| |||||||| ||| |||||| ||||| ||||||||||  ||||||||| ||||||    
T  18763492 aacgccgcacaagacgacgaacaacacaacaccgcacttagacgatgaaatcacaaaaaaaacacaaaagagaaaacttgat-catgtgaaaaccactta 18763394  T
Q  109 tttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaa 178  Q
    |||| ||||||||||| |||||        |||  |||||||||||||||||||||||| |||| |||||    
T  18763393 tttagattgaaagaaaagggaa----aaaagatgtagaggggtgattctaggtcaaaaaatgacataaaa 18763328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 130
Target Start/End: Original strand, 9169334 - 9169452
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcactta 108  Q
    |||| |||||||||||||||||||||||| | |||||| |||||||||||||||   | |||||| ||| ||||||||||||  ||||||||| ||||||    
T  9169334 aacgacgcacaagacaacgaacaacacaacgccgcacttagacgacgaaatcac---aaaaacacaaaaggaaaaacttgatagatgtgaaaaccactta 9169430  T
Q  109 tttaaattgaaagaaatgggaa 130  Q
    |||| ||||||||||| |||||    
T  9169431 tttagattgaaagaaaagggaa 9169452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 195
Target Start/End: Complemental strand, 4778777 - 4778596
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||| ||||||||| ||||| ||||||| | |||||| | ||||||||||||  ||| |||||| || | |||||||||||  ||||||||| ||||||    
T  4778777 aacgctgcacaagacgacgaataacacaacgccgcacttaaacgacgaaatca--aaaaaaacacaaagggaaaaacttgatagatgtgaaaaccactta 4778680  T
Q  109 tttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatga 195  Q
    |||||||||||||||| |||||        |||  |||||||||||||||||||||||| |||||||||| || ||||  |||||||    
T  4778679 tttaaattgaaagaaaagggaa---aaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatga 4778596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 223
Target Start/End: Complemental strand, 24461469 - 24461254
Alignment:
Q  2 aatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaa-acttgatgtatgtgaaa 100  Q
    |||||||||||||||||||| |||||||||||||||| |   ||||  ||||||| ||||||| || |||||| ||| |||| ||||||| |||||| ||    
T  24461469 aatcaaacaacgccgcacaaaacaacgaacaacacaacgcaacactcggacgacggaatcacgtaa-aaacacaaaaaaaaacacttgatatatgtggaa 24461371  T
Q  101 atcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaa 200  Q
    |||||||||||| ||||||  ||| | |||        ||| |||||| |||||||||||||||||| |||||||||| || ||||  |  |||||||||    
T  24461370 atcacttatttagattgaa--aaaagagaa----aacggatgcagaggagtgattctaggtcaaaaaatgacctaaaaccacccctccttaatgagtgaa 24461277  T
Q  201 agaggaagaaaacttagagagaa 223  Q
    |||| |  |||||||||||||||    
T  24461276 agagaataaaaacttagagagaa 24461254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 38445190 - 38445077
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||| ||||||||||||| |  ||||| |||||||||||||||  || |||||| |||| |||||||||||  ||||||||| ||||||    
T  38445190 aacgccgcacaagacgacgaacaacacaacgctgcacttagacgacgaaatcac--aaaaaacacaaaagaaaaaacttgatagatgtgaaaaccactta 38445093  T
Q  109 tttaaattgaaagaaa 124  Q
    |||| |||||||||||    
T  38445092 tttatattgaaagaaa 38445077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 10 - 223
Target Start/End: Complemental strand, 7646497 - 7646287
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||| |||||||||| || | |||||| |||||||||||||||  |  |||||| ||| |||||||||| |  ||||||||| ||||||    
T  7646497 aacgccgcacaagacgacgaacaacataacgccgcacttagacgacgaaatcac--agaaaacacaaaaggaaaaacttggtagatgtgaaaaccactta 7646400  T
Q  109 tttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaag 208  Q
    |||| || |||||||| |||  |       |||  |||||||||||||||||||||||| |||||||||| || ||||  |||||||  ||| ||| |||    
T  7646399 tttagatcgaaagaaaaggg--gaaaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaag 7646302  T
Q  209 aaaacttagagagaa 223  Q
    |||  ||||||||||    
T  7646301 aaagtttagagagaa 7646287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 25623001 - 25623068
Alignment:
Q  5 caaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    ||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  25623001 caaacaacgccgcacaaagacgacgaacaaaacaatgtcgcactaagacgacgaaatcacgaaagaaa 25623068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 36943197 - 36943312
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcac-gaaagaaacacgaaagaaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||| ||||||||||||| | |||||| |||||||||||||||  ||| ||| || ||| |||||||||||  |||||||||  |||||    
T  36943197 aacgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcacaaaaaaaaaaacaaaaaaaaaacttgatagatgtgaaaactactta 36943296  T
Q  109 tttaaattgaaagaaa 124  Q
    |||| |||||||||||    
T  36943297 tttagattgaaagaaa 36943312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 130
Target Start/End: Original strand, 4041670 - 4041789
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||| ||||||| ||||||||||||| | |||||| ||| ||||||||||| |||  ||||| |||| |||||||||||  ||||||||| ||||||    
T  4041670 aacgccgtacaagacgacgaacaacacaacgacgcacttagaagacgaaatcacaaaa--aacacaaaaggaaaaacttgatagatgtgaaaaccactta 4041767  T
Q  109 tttaaattgaaagaaatgggaa 130  Q
    |||| ||||||||||| |||||    
T  4041768 tttagattgaaagaaacgggaa 4041789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 195
Target Start/End: Complemental strand, 7448271 - 7448091
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||| ||||||||||||| | |||||| |||| ||||||||||  || |||||| ||| ||||||||||||  ||||||||| || |||    
T  7448271 aacgccgcacaagacgacgaacaacacaacgccgcacttagacaacgaaatcac--aaaaaacacaaaaggaaaaacttgatagatgtgaaaaccattta 7448174  T
Q  109 tttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatga 195  Q
    |||| ||||||||||| ||| |        |||  ||||||||||||||||| |||||| |||||||||| || ||||  |||||||    
T  7448173 tttagattgaaagaaaagggga----aaaagatgtagaggggtgattctaggacaaaaaatgacctaaaaccacccctcctcgatga 7448091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 124
Target Start/End: Original strand, 30400114 - 30400226
Alignment:
Q  13 gccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaa-cttgatgtatgtgaaaatcacttattt 111  Q
    |||||||||||| | |||||||||||||||||||| |||||||||||| |  ||| ||||||  ||||||||  ||||| |||||||||| |||||||||    
T  30400114 gccgcacaagacgaagaacaacacaatgtcgcacttagacgacgaaataaaaaaaaaaacacagaagaaaaattttgatatatgtgaaaaacacttattt 30400213  T
Q  112 aaattgaaagaaa 124  Q
    | ||| |||||||    
T  30400214 agattaaaagaaa 30400226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 130
Target Start/End: Complemental strand, 1415581 - 1415469
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaaatcacttat 109  Q
    ||||||||||||||| | ||||||||||| |||| ||| ||||||||||||||| ||| |||        |||| |||||| | ||||||||||||||||    
T  1415581 aacgccgcacaagacgaagaacaacacaacgtcgtacttagacgacgaaatcacaaaaaaaa--------aaaatcttgatatgtgtgaaaatcacttat 1415490  T
Q  110 ttaaattgaaagaaatgggaa 130  Q
    ||||||||||||||| |||||    
T  1415489 ttaaattgaaagaaaagggaa 1415469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 19597909 - 19597697
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaa 100  Q
    |||||||||||| |  ||||| || |||||||||||||||| |||||  |||||||||||||| ||||||     ||| |||||||| || |||||| ||    
T  19597909 aaatcaaacaacacgacacaatacgacgaacaacacaatgttgcacttggacgacgaaatcacaaaagaa--gataaaaaaaaacttaatatatgtggaa 19597812  T
Q  101 atcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaa 200  Q
    ||||||||| || || |||||||||| |||        ||| |||  |||||||||||||||||||  | |||||||||||| ||| || |||||||| |    
T  19597811 atcacttatgtagatcgaaagaaatgcgaa----aaaagatgcaggagggtgattctaggtcaaaagataacctaaaatcat-cctctttgatgagtgga 19597717  T
Q  201 agaggaagaaaacttagaga 220  Q
    |||| |||| ||||||||||    
T  19597716 agagaaagataacttagaga 19597697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 112
Target Start/End: Complemental strand, 35220349 - 35220249
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaaatcacttat 109  Q
    ||||||||||||||| | |||||||| |||| |||||| |||||||||||||||  || |||||| | | ||||||||||| |||||||||| |||||||    
T  35220349 aacgccgcacaagacgatgaacaacataatgccgcacttagacgacgaaatcac--aaaaaacacaagaaaaaaacttgatttatgtgaaaaccacttat 35220252  T
Q  110 tta 112  Q
    |||    
T  35220251 tta 35220249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 14423355 - 14423231
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaa 100  Q
    |||||||||||||  ||||||||| ||||| |||| | |||| || ||||| |||||||||| |||| ||| ||  |||||||||||||| |||||| ||    
T  14423355 aaatcaaacaacgatgcacaagacgacgaataacatattgtcacattaagatgacgaaatcaagaaaaaaa-acacaagaaaaacttgatatatgtggaa 14423257  T
Q  101 atcacttatttaaattgaaagaaatg 126  Q
      |||||||||| |||||||||||||    
T  14423256 cccacttatttagattgaaagaaatg 14423231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 124
Target Start/End: Complemental strand, 4264492 - 4264383
Alignment:
Q  14 ccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcacttattta 112  Q
    ||||||||||| ||||||||| |||  || ||||  |||||||||||||| |||  ||||| ||| |||||||||||| |||||||||| ||||||||||    
T  4264492 ccgcacaagacgacgaacaacgcaacatctcactccgacgacgaaatcacaaaa--aacacaaaatgaaaaacttgatatatgtgaaaaccacttattta 4264395  T
Q  113 aattgaaagaaa 124  Q
    |||| |||||||    
T  4264394 aattaaaagaaa 4264383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 120
Target Start/End: Original strand, 4904221 - 4904330
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaa-acttgatgtatgtgaaaatcactta 108  Q
    |||| |||||||||| ||||||||||||| | | ||||  |||||||||||||| |||  ||||| |||||||| ||||||| |||||||||| ||||||    
T  4904221 aacgtcgcacaagacgacgaacaacacaacgccacactttgacgacgaaatcacaaaa--aacacaaaagaaaaaacttgatatatgtgaaaaccactta 4904318  T
Q  109 tttaaattgaaa 120  Q
    |||| |||||||    
T  4904319 tttagattgaaa 4904330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 223
Target Start/End: Original strand, 7677949 - 7678162
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||| ||||||||||||| | |||||| |||||||||||||||  || |||| | ||| ||||||||  ||  ||||||||| ||||||    
T  7677949 aacgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcac--aaaaaactcaaaaggaaaaact--atagatgtgaaaaccactta 7678044  T
Q  109 tttaaattgaaagaaatggg---aagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagagg 205  Q
    |||| ||||||||||| |||   ||        |||  |||||||||||||||||||||||| |||||||||| || ||||  ||||| |  ||| |||     
T  7678045 tttagattgaaagaaaagggagaaaaaaaaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcatcgatcaacgaaggaga 7678144  T
Q  206 aagaaaacttagagagaa 223  Q
    ||||||  ||||||||||    
T  7678145 aagaaagtttagagagaa 7678162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 120
Target Start/End: Original strand, 23933692 - 23933806
Alignment:
Q  4 tcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaaatc 103  Q
    ||||||||| |||||||||||||| | |||||||||||||| || | ||||  ||||||||||| |||||| ||  ||||| ||||| ||||||||| ||    
T  23933692 tcaaacaacaccgcacaagacaacaaccaacacaatgtcgcgctcaaacgaaaaaatcacgaaa-aaacac-aagaaaaaaattgatatatgtgaaagtc 23933789  T
Q  104 acttatttaaattgaaa 120  Q
    ||||||||| |||||||    
T  23933790 acttatttagattgaaa 23933806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 130
Target Start/End: Original strand, 19062431 - 19062547
Alignment:
Q  13 gccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcacttattt 111  Q
    |||||||||||| ||||||||||||| |  ||||| ||||||||| ||||| |||  ||||  |||| |||||||||||  ||||||||| |||||||||    
T  19062431 gccgcacaagacgacgaacaacacaacgctgcacttagacgacgatatcacaaaa--aacataaaaggaaaaacttgatagatgtgaaaaccacttattt 19062528  T
Q  112 aaattgaaagaaatgggaa 130  Q
    | ||||||||||| |||||    
T  19062529 agattgaaagaaaagggaa 19062547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 19580958 - 19581025
Alignment:
Q  5 caaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    ||||||||| ||||||| ||| |||||||| ||||||||||||||||||||| |||||||||||||||    
T  19580958 caaacaacgtcgcacaaagacgacgaacaaaacaatgtcgcactaagacgacaaaatcacgaaagaaa 19581025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 10 - 115
Target Start/End: Original strand, 31210683 - 31210787
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcactta 108  Q
    |||||||||||||||||| |||||||||| | |||||| ||||||||||||||   || |||||| |||| |||||||||||  ||||||||| ||||||    
T  31210683 aacgccgcacaagacaacaaacaacacaacgccgcacttagacgacgaaatca--taaaaaacacaaaagaaaaaacttgatagatgtgaaaaccactta 31210780  T
Q  109 tttaaat 115  Q
    | |||||    
T  31210781 tctaaat 31210787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 223
Target Start/End: Original strand, 27097485 - 27097689
Alignment:
Q  13 gccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcacttattt 111  Q
    |||||||||||| ||||||||||||| | |||||| |||||||||||||| |||| |||||| ||| ||||||||||||   |||| |||||||||||||    
T  27097485 gccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatca-gaaa-aaacacaaaaggaaaaacttgatagttgtg-aaatcacttattt 27097581  T
Q  112 aaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaagaaa 211  Q
    | ||  ||||||| ||| |        |||  ||| |||||||||||||||||||| ||||||||||||| ||||  |||||||  ||| ||| ||||||    
T  27097582 agatcaaaagaaaagggga---aaaaagatgtaga-gggtgattctaggtcaaaaaatgacctaaaatcacccctcctcgatgaacgaaggagaaagaaa 27097677  T
Q  212 acttagagagaa 223  Q
      ||||||||||    
T  27097678 gtttagagagaa 27097689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 28 - 124
Target Start/End: Complemental strand, 36691880 - 36691785
Alignment:
Q  28 gaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcacttatttaaattgaaagaaa 124  Q
    |||||||| || | |||||| ||||||||||||||||||| |||||| |||| ||||||||||| |||||| ||| |||||||||| |||||||||||    
T  36691880 gaacaacaaaacgccgcacttagacgacgaaatcacgaaa-aaacacaaaagaaaaaacttgatatatgtg-aaaccacttatttagattgaaagaaa 36691785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 224
Target Start/End: Original strand, 18107823 - 18108021
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaaatcacttat 109  Q
    ||||||||||||||| ||||||||||       ||||| ||||||||||||||| |||  ||||| || |||||| ||||| | |||||||| |||||||    
T  18107823 aacgccgcacaagacgacgaacaaca-------gcactcagacgacgaaatcacaaaa--aacac-aatgaaaaa-ttgatatgtgtgaaaaccacttat 18107911  T
Q  110 ttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaaga 209  Q
    |||| |||||||||| ||| |        ||| || || ||||||||||||||||||| |||||||||| || |  |  || |||| |||||||| ||||    
T  18107912 ttaatttgaaagaaaggggta-----aaagatgcaaagaggtgattctaggtcaaaaaatgacctaaaaccaccattcctcaatgaatgaaagagaaaga 18108006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 19953728 - 19953661
Alignment:
Q  5 caaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    ||||||||||||||||| ||| || |||||||||| |||| |||||||||||||||| ||||||||||    
T  19953728 caaacaacgccgcacaaagacgacaaacaacacaacgtcgtactaagacgacgaaattacgaaagaaa 19953661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 124
Target Start/End: Original strand, 28871869 - 28871951
Alignment:
Q  42 cgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcacttatttaaattgaaagaaa 124  Q
    |||||| |||| ||||||||||  || |||||| ||| |||||||||||| | |||||||||||||||||||||||||||||||    
T  28871869 cgcactcagacaacgaaatcacataa-aaacacaaaatgaaaaacttgatatgtgtgaaaatcacttatttaaattgaaagaaa 28871951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 29279667 - 29279759
Alignment:
Q  31 caacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcacttatttaaattgaaagaaa 124  Q
    |||||||| | |||| | ||||||||||||||| |||  ||||| |||| ||||||||||| |||||||||| |||||||||| |||||||||||    
T  29279667 caacacaacgccgcaattagacgacgaaatcacaaaa--aacacaaaaggaaaaacttgatatatgtgaaaaccacttatttagattgaaagaaa 29279759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 1421700 - 1421586
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaaatcacttat 109  Q
    ||||| ||||||||| |||||||||| ||   |||||| ||||||||||||||| ||| | |||  ||| | ||| |||||  ||||||||| |||||||    
T  1421700 aacgctgcacaagacgacgaacaacataacaccgcacttagacgacgaaatcacaaaaaacacaaaaaaaataaaattgatagatgtgaaaaccacttat 1421601  T
Q  110 ttaaattgaaagaaa 124  Q
    ||| |||||||||||    
T  1421600 ttagattgaaagaaa 1421586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 13268730 - 13268656
Alignment:
Q  5 caaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa 78  Q
    ||||||||| ||||||| ||| |||||||| |||| |||||||||||||||| ||| ||||||||||| ||||||    
T  13268730 caaacaacgtcgcacaaagacgacgaacaaaacaacgtcgcactaagacgacaaaaccacgaaagaaaaacgaaa 13268656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 31128856 - 31128968
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcactta 108  Q
    |||||| |||||||| || |||||||||| | |||| | | | ||||||||||| |||   |||| |||| ||||||||||| |||||||||| ||||||    
T  31128856 aacgccacacaagacgactaacaacacaacgccgcaattaaatgacgaaatcacaaaa---acacaaaaggaaaaacttgatatatgtgaaaaccactta 31128952  T
Q  109 tttaaattgaaagaaa 124  Q
    |||| |||||||||||    
T  31128953 tttagattgaaagaaa 31128968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 31269073 - 31269114
Alignment:
Q  26 acgaacaacacaatgtcgcactaagacgacgaaatcacgaaa 67  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  31269073 acgaacaaaacaatgtcgcactaagacgacgaaatcacgaaa 31269114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 6436503 - 6436407
Alignment:
Q  143 cagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaagaaaacttagagagaaaacaaagtttctctca 239  Q
    |||||||||||||||| |||||||| ||||||||||||| |||| ||  |||| ||||| || | |  |||||||||||||   |||||||||||||    
T  6436503 cagaggggtgattctatgtcaaaaaatgacctaaaatcacccctctttaatgattgaaaaagaagggcaacttagagagaagctaaagtttctctca 6436407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 7443522 - 7443586
Alignment:
Q  5 caaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaag 68  Q
    ||||||||| ||||||| ||| |||||||| |||| |||||||||||||| ||||||||||||||    
T  7443522 caaacaacgtcgcacaaagacgacgaacaaaacaacgtcgcactaagacggcgaaatcacgaaag 7443586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 28 - 130
Target Start/End: Original strand, 29173813 - 29173914
Alignment:
Q  28 gaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcacttatttaaattgaaagaaatg 126  Q
    ||||||||||| | |||||| |||||||||||||||  || |||||| ||| ||||||| |||  |||||||||| |||||||||  ||||||||||| |    
T  29173813 gaacaacacaacgccgcacttagacgacgaaatcac--aaaaaacacaaaaggaaaaacctgaaatatgtgaaaaccacttatttggattgaaagaaaag 29173910  T
Q  127 ggaa 130  Q
    ||||    
T  29173911 ggaa 29173914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 130
Target Start/End: Complemental strand, 33923729 - 33923606
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaac--acgaaagaaaaa-cttgatgtatgtgaaaatcact 106  Q
    ||||||||||||||| |||||||||| ||  ||| ||| |||| |||||||||| ||| |||   |  ||||||||| ||| || | |||||||| ||||    
T  33923729 aacgccgcacaagacgacgaacaacagaacatcgtacttagacaacgaaatcacaaaaaaaaacaaaaaaagaaaaaacttaatatgtgtgaaaaccact 33923630  T
Q  107 tatttaaattgaaagaaatgggaa 130  Q
    |||||||||||||||||| |||||    
T  33923629 tatttaaattgaaagaaaagggaa 33923606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 25237298 - 25237349
Alignment:
Q  20 aagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    ||||| |||||||| |||| ||||||||||||||||||||||| ||||||||    
T  25237298 aagacgacgaacaaaacaacgtcgcactaagacgacgaaatcatgaaagaaa 25237349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 35353785 - 35353734
Alignment:
Q  20 aagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    ||||| || ||||| |||| ||||||||||||||||||||||||||||||||    
T  35353785 aagacgacaaacaaaacaacgtcgcactaagacgacgaaatcacgaaagaaa 35353734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 309
Target Start/End: Complemental strand, 7275694 - 7275652
Alignment:
Q  267 aagtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    |||||||||||| ||||| ||||||||||||||||||||||||    
T  7275694 aagtttcgtcaattatcctctgacattaacaaaacttcaatta 7275652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 309
Target Start/End: Original strand, 9758316 - 9758358
Alignment:
Q  267 aagtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    |||||||||||| |||||||||| |||||||||||||||||||    
T  9758316 aagtttcgtcaattatcccctgaaattaacaaaacttcaatta 9758358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 17249216 - 17249274
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaa 59  Q
    |||| |||| |||||||||||||| ||||||||||||| |||||||| |||| ||||||    
T  17249216 aaataaaactacgccgcacaagacgacgaacaacacaaggtcgcacttagacaacgaaa 17249274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 126
Target Start/End: Original strand, 19596025 - 19596067
Alignment:
Q  84 acttgatgtatgtgaaaatcacttatttaaattgaaagaaatg 126  Q
    ||||||| ||||||||||||||||||||| |||||||||||||    
T  19596025 acttgatatatgtgaaaatcacttatttacattgaaagaaatg 19596067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 71
Target Start/End: Complemental strand, 26491435 - 26491393
Alignment:
Q  29 aacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    ||||| |||| ||||||||||||||||||||||||||||||||    
T  26491435 aacaaaacaacgtcgcactaagacgacgaaatcacgaaagaaa 26491393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 29812572 - 29812637
Alignment:
Q  6 aaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    ||||||| |||||||| ||| |||||||| |||  ||||||||||||||||||||||||||||||||    
T  29812572 aaacaacaccgcacaaagacgacgaacaaaacac-gtcgcactaagacgacgaaatcacgaaagaaa 29812637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 309
Target Start/End: Original strand, 39939307 - 39939349
Alignment:
Q  267 aagtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    |||||| ||||| ||||||||||||||||||||||||||||||    
T  39939307 aagttttgtcaattatcccctgacattaacaaaacttcaatta 39939349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 71
Target Start/End: Original strand, 3397961 - 3398002
Alignment:
Q  30 acaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    |||| |||||||||||| ||||||||||||||||||||||||    
T  3397961 acaaaacaatgtcgcacaaagacgacgaaatcacgaaagaaa 3398002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 5427944 - 5428055
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcactta 108  Q
    |||||| |||||||| |||||||||| || | ||||||  ||||||||||||||   | |||||| |||| |||||||||||  |||||||||  |||||    
T  5427944 aacgccacacaagacgacgaacaacaaaacgccgcacttggacgacgaaatcac---aaaaacacaaaagaaaaaacttgatagatgtgaaaa-aactta 5428039  T
Q  109 tttaaattgaaagaaa 124  Q
    |||| |||||||||||    
T  5428040 tttagattgaaagaaa 5428055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 10929689 - 10929628
Alignment:
Q  6 aaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaa 67  Q
    |||||||| || ||||||| |||||||||||||   |||||| |||||||||||||||||||    
T  10929689 aaacaacgtcgtacaagacgacgaacaacacaacaccgcactcagacgacgaaatcacgaaa 10929628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 34128755 - 34128820
Alignment:
Q  2 aatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaa 67  Q
    |||||||||||| |||||||||| |||||||||| ||   |||||| |||||||||||| ||||||    
T  34128755 aatcaaacaacgtcgcacaagacgacgaacaacataacaccgcactcagacgacgaaataacgaaa 34128820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 36323893 - 36323840
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcac 63  Q
    |||||||||||||||||| |||||||||| | |||||| | |||||||||||||    
T  36323893 aacgccgcacaagacaacaaacaacacaaagccgcactcaaacgacgaaatcac 36323840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 28227750 - 28227874
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaa-aaacttgatgtatgtgaa 99  Q
    ||||| ||||||| |||||||||| ||||||| ||||||| | ||||    ||  ||||||| |||| ||| |   ||||| ||||||||| | ||||||    
T  28227750 aaatctaacaacgtcgcacaagacgacgaacagcacaatgcctcactctagcggggaaatcatgaaaaaaaaattgaagaagaaacttgatatttgtgaa 28227849  T
Q  100 aatcacttatttaaattgaaagaaa 124  Q
    ||||||||||||| |||||||||||    
T  28227850 aatcacttatttagattgaaagaaa 28227874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 28 - 113
Target Start/End: Complemental strand, 16375953 - 16375871
Alignment:
Q  28 gaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaaatcacttatttaa 113  Q
    ||||||||||||| |||| | |||||| |||||||| ||| | ||| ||||   ||||||||| ||||||||||||| ||||||||    
T  16375953 gaacaacacaatgccgcattcagacgatgaaatcacaaaaaacacaagaaa---aaacttgatatatgtgaaaatcatttatttaa 16375871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 27024095 - 27024154
Alignment:
Q  5 caaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcac 63  Q
    ||||||||| ||||||| ||| ||||||||  ||||||||||| ||||||||||||||||    
T  27024095 caaacaacgtcgcacaaagacgacgaacaaaccaatgtcgcacgaagacgacgaaatcac 27024154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 36508087 - 36508029
Alignment:
Q  5 caaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcac 63  Q
    ||||||||| ||||||| ||||||||||||| ||| ||||||| ||||||||||||||||    
T  36508087 caaacaacgtcgcacaaagacaacgaacaac-caacgtcgcacgaagacgacgaaatcac 36508029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 37416740 - 37416657
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaa 84  Q
    ||||||||||||| |||||||||| |||||||||||||    ||||| |||||||  |||||||||| | |||  |||||||||    
T  37416740 aaatcaaacaacgtcgcacaagacgacgaacaacacaacacggcacttagacgacagaatcacgaaaaacacaaaaaagaaaaa 37416657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 148 - 195
Target Start/End: Original strand, 37876807 - 37876854
Alignment:
Q  148 gggtgattctaggtcaaaaattgacctaaaatcatccctattcgatga 195  Q
    ||||||||||||||||||||||||||||||| || ||||  |||||||    
T  37876807 gggtgattctaggtcaaaaattgacctaaaaccacccctcctcgatga 37876854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 37883795 - 37883744
Alignment:
Q  20 aagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    ||||| |||||||| |||| ||||||||||||| |||||| |||||||||||    
T  37883795 aagacgacgaacaaaacaacgtcgcactaagacaacgaaaccacgaaagaaa 37883744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 41842106 - 41842047
Alignment:
Q  5 caaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcac 63  Q
    |||||||||| |||||| ||| ||||||||  ||| ||||||||||||||||||||||||    
T  41842106 caaacaacgcagcacaaagacgacgaacaaaccaacgtcgcactaagacgacgaaatcac 41842047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 309
Target Start/End: Original strand, 2694904 - 2694946
Alignment:
Q  267 aagtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    ||||||| |||| |||||||||| |||||||||||||||||||    
T  2694904 aagtttcatcaattatcccctgaaattaacaaaacttcaatta 2694946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 2808509 - 2808543
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  2808509 aaatcaaacaacgccgcacaagacgacgaacaaca 2808543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 3725224 - 3725190
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaaca 35  Q
    |||||||||||||||| ||||||||||||||||||    
T  3725224 aaatcaaacaacgccgtacaagacaacgaacaaca 3725190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 309
Target Start/End: Original strand, 3910226 - 3910268
Alignment:
Q  267 aagtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    |||||||||||| ||| |||||| |||||||||||||||||||    
T  3910226 aagtttcgtcaattattccctgatattaacaaaacttcaatta 3910268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 4228177 - 4228143
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  4228177 aaatcaaacaacgccgcacaagacgacgaacaaca 4228143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 6173676 - 6173642
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaaca 35  Q
    ||||||||||||||| |||||||||||||||||||    
T  6173676 aaatcaaacaacgccacacaagacaacgaacaaca 6173642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 7015748 - 7015782
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  7015748 aaatcaaacaacgccgcacaagacgacgaacaaca 7015782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 9986379 - 9986413
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  9986379 aaatcaaacaacgccgcacaagacgacgaacaaca 9986413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 309
Target Start/End: Original strand, 10315230 - 10315272
Alignment:
Q  267 aagtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    ||||||| |||| |||||||||| |||||||||||||||||||    
T  10315230 aagtttcatcaattatcccctgaaattaacaaaacttcaatta 10315272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 223
Target Start/End: Complemental strand, 17150056 - 17149982
Alignment:
Q  149 ggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaagaaaacttagagagaa 223  Q
    ||||||||||||||||||| |||  |||||| ||| ||  ||||||| |||| ||| || |||||||||||||||    
T  17150056 ggtgattctaggtcaaaaaatgaattaaaataatctcttctcgatgaatgaaggagaaataaaacttagagagaa 17149982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 20047119 - 20047153
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  20047119 aaatcaaacaacgccgcacaagacgacgaacaaca 20047153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 20145797 - 20145863
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaa 67  Q
    |||| |||||||||||||||||||||| |||||||||| | | |||| ||||||  |||||| ||||    
T  20145797 aaattaaacaacgccgcacaagacaaccaacaacacaacgccacactcagacgataaaatcatgaaa 20145863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 27249188 - 27249222
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  27249188 aaatcaaacaacgccgcacaagacgacgaacaaca 27249222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 30420722 - 30420688
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  30420722 aaatcaaacaacgccgcacaagacgacgaacaaca 30420688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 37876685 - 37876743
Alignment:
Q  13 gccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    |||||||||||| |||||||||| || | |||||| ||||||| ||||||| |||||||    
T  37876685 gccgcacaagacgacgaacaacaaaacgccgcacttagacgaccaaatcacaaaagaaa 37876743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 40659969 - 40660003
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  40659969 aaatcaaacaacgccgcacaagacgacgaacaaca 40660003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 126
Target Start/End: Complemental strand, 42714693 - 42714647
Alignment:
Q  80 aaaaacttgatgtatgtgaaaatcacttatttaaattgaaagaaatg 126  Q
    ||||||||||| ||||| ||||||||||||||| || ||||||||||    
T  42714693 aaaaacttgatatatgtaaaaatcacttatttagatcgaaagaaatg 42714647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 33140474 - 33140433
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtc 42  Q
    ||||||||| ||||||||||||||| |||||||| |||||||    
T  33140474 aaatcaaacgacgccgcacaagacagcgaacaacgcaatgtc 33140433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 181
Target Start/End: Original strand, 39311058 - 39311091
Alignment:
Q  148 gggtgattctaggtcaaaaattgacctaaaatca 181  Q
    |||||||||||||||||||| |||||||||||||    
T  39311058 gggtgattctaggtcaaaaaatgacctaaaatca 39311091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 42698777 - 42698829
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcac 63  Q
    |||||| |||||||| ||||||||||||| |||||||| |||||| ||||||||    
T  42698777 aacgccacacaagacgacgaacaacacaacgtcgcact-agacgatgaaatcac 42698829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #91
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 2251301 - 2251365
Alignment:
Q  5 caaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaag 68  Q
    ||||||||| ||||||| ||| || ||||| |||  |||||||||||||||||||||||| ||||    
T  2251301 caaacaacgtcgcacaaagacgacaaacaaaacagcgtcgcactaagacgacgaaatcacaaaag 2251365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #92
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 5428084 - 5428152
Alignment:
Q  155 tctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaagaaaacttagagagaa 223  Q
    ||||||||||||||| |||||||| || ||||  |||||||  ||| ||| ||||||| ||||||||||    
T  5428084 tctaggtcaaaaattaacctaaaaccacccctcctcgatgaacgaaggagaaagaaaatttagagagaa 5428152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #93
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 124
Target Start/End: Complemental strand, 11833427 - 11833395
Alignment:
Q  92 tatgtgaaaatcacttatttaaattgaaagaaa 124  Q
    |||||||||| ||||||||||||||||||||||    
T  11833427 tatgtgaaaaccacttatttaaattgaaagaaa 11833395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #94
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 14416201 - 14416089
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaa 100  Q
    ||||||||||||||| |||||||| |||||||| |||| | |||| | | ||||| |||||||  || |||||| | | ||||||||| |||||||| ||    
T  14416201 aaatcaaacaacgccacacaagacgacgaacaatacaacgccgcattcaaacgacaaaatcac--aaaaaacaccaga-aaaaacttggtgtatgtggaa 14416105  T
Q  101 atcacttatttaaatt 116  Q
    |  ||||| |||||||    
T  14416104 actacttaattaaatt 14416089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #95
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 14423181 - 14423153
Alignment:
Q  150 gtgattctaggtcaaaaattgacctaaaa 178  Q
    |||||||||||||||||||||||||||||    
T  14423181 gtgattctaggtcaaaaattgacctaaaa 14423153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #96
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 17068871 - 17068927
Alignment:
Q  5 caaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaat 60  Q
    |||||||| |||||||| ||| |||||||| |||| |||||||||||||||| ||||    
T  17068871 caaacaacaccgcacaaagacgacgaacaaaacaacgtcgcactaagacgacaaaat 17068927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #97
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 120
Target Start/End: Original strand, 31581826 - 31581866
Alignment:
Q  80 aaaaacttgatgtatgtgaaaatcacttatttaaattgaaa 120  Q
    ||||||| ||| ||||||||||||||||||||| |||||||    
T  31581826 aaaaactagatctatgtgaaaatcacttatttagattgaaa 31581866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #98
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 120
Target Start/End: Complemental strand, 32913204 - 32913176
Alignment:
Q  92 tatgtgaaaatcacttatttaaattgaaa 120  Q
    |||||||||||||||||||||||||||||    
T  32913204 tatgtgaaaatcacttatttaaattgaaa 32913176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #99
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 120
Target Start/End: Complemental strand, 34598962 - 34598922
Alignment:
Q  80 aaaaacttgatgtatgtgaaaatcacttatttaaattgaaa 120  Q
    ||||||| ||| ||||||||||||||||||||| |||||||    
T  34598962 aaaaactagatctatgtgaaaatcacttatttagattgaaa 34598922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #100
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 222
Target Start/End: Complemental strand, 35220222 - 35220147
Alignment:
Q  144 agaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaagaaaacttagagaga 222  Q
    |||||||||||||||||||||||| | |||||||| || |||   ||||||| |||| ||| ||||||  |||||||||    
T  35220222 agaggggtgattctaggtcaaaaaataacctaaaaccacccc---tcgatgaatgaaggagaaagaaagtttagagaga 35220147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #101
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 36234052 - 36234020
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaa 33  Q
    |||||||||||||||||||||||| ||||||||    
T  36234052 aaatcaaacaacgccgcacaagacgacgaacaa 36234020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #102
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 43130117 - 43130077
Alignment:
Q  269 gtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    |||||||||| || ||||||| |||||||||||||||||||    
T  43130117 gtttcgtcaattaccccctgaaattaacaaaacttcaatta 43130077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 127; Significance: 1e-65; HSPs: 87)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 34413163 - 34413403
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaa 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||      ||||||||||||    
T  34413163 aaatcaaacaacgccgcacaagacgacgaacaacacaatgtcgcactaagacgacaaaatcacgaaa-aaacacgaaagaaa------atgtatgtgaaa 34413255  T
Q  101 atcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaa 200  Q
    |||||||||||| ||||||||||| |||||        ||| ||||||||||||||||| | ||||||||||||||||||| ||||| ||||| ||||||    
T  34413256 atcacttatttagattgaaagaaaggggaa---aaaaagatgcagaggggtgattctagataaaaaattgacctaaaatcacccctactcgataagtgaa 34413352  T
Q  201 agaggaagaaaacttagagagaaaacaaagtttctctcactgaaaaattaa 251  Q
    |||| || |||||||||||||||  || ||||||||||||| |||||||||    
T  34413353 agagaaaaaaaacttagagagaaggcagagtttctctcactaaaaaattaa 34413403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 16161857 - 16161613
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaa 100  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||    
T  16161857 aaatcaaacaacgccgcacaagacgacgaacaacacaacgtcgcactaagacgacgaaatcacgaaa-aaacacaaaagaaaaacttgatgtatgtggaa 16161759  T
Q  101 atcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaa 200  Q
    |||||||||||| ||||||| ||| | |||         ||  |||| ||||||||||||||||||||||||||||||| | ||||  |||||| |||||    
T  16161758 atcacttatttagattgaaataaaggagaa----aaaatatgaagagaggtgattctaggtcaaaaattgacctaaaattacccctcctcgatgtgtgaa 16161663  T
Q  201 agaggaagaaaacttagagagaaaacaaagtttctctcactgaaaaatta 250  Q
    |||||||||||| ||||||||||  || |||||||||||||  |||||||    
T  16161662 agaggaagaaaatttagagagaatgcagagtttctctcactagaaaatta 16161613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 48750204 - 48749998
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaa 100  Q
    ||||||||||||| |||||||||| ||||||||||||| |||||||||||||  |||||||||||||||||           ||||||||||||||||||    
T  48750204 aaatcaaacaacgtcgcacaagacgacgaacaacacaacgtcgcactaagacagcgaaatcacgaaagaaa-----------aacttgatgtatgtgaaa 48750116  T
Q  101 atcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaa 200  Q
    |||||||||||| ||||||||||| |||||        ||| || ||| ||||||||||||||||| ||||||||| |||| ||||  ||||||||||||    
T  48750115 atcacttatttagattgaaagaaaggggaa----aaaagatgca-aggagtgattctaggtcaaaatttgacctaatatcacccctcctcgatgagtgaa 48750021  T
Q  201 agaggaagaaaacttagagagaa 223  Q
    |||||||||||||||||||||||    
T  48750020 agaggaagaaaacttagagagaa 48749998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 49626937 - 49626718
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaa-acttgatgtatgtgaa 99  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||  ||||||||||||||| ||| |||||| ||||||||  |||||| | ||||||    
T  49626937 aaatcaaacaacgccgcacaagacgacgaacaacacaaggtcgcacatagacgacgaaatcacaaaaaaaacacaaaagaaaacgcttgatatttgtgaa 49626838  T
Q  100 aatcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtga 199  Q
    ||||||||||||| || |||||||| |||||        ||| ||||||||||||| ||||||||| | |||||||||| || ||||  |||||||||||    
T  49626837 aatcacttatttagatagaaagaaaggggaa----aaaagatgcagaggggtgattttaggtcaaagaatgacctaaaaccacccctcctcgatgagtga 49626742  T
Q  200 aagaggaagaaaacttagagagaa 223  Q
    ||||| | ||| ||||||||||||    
T  49626741 aagagaaggaacacttagagagaa 49626718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 36775783 - 36775905
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaa 100  Q
    |||||||||||| | ||||||||| ||||||||||||| |||||||||| | || |||||||||||| ||||||||||||||||||||||||||||||||    
T  36775783 aaatcaaacaacactgcacaagacgacgaacaacacaacgtcgcactaaaatgaagaaatcacgaaa-aaacacgaaagaaaaacttgatgtatgtgaaa 36775881  T
Q  101 atcacttatttaaattgaaagaaa 124  Q
    |||| ||||||| |||||||||||    
T  36775882 atcatttatttagattgaaagaaa 36775905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 32679164 - 32679380
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaa-acttgatgtatgtgaa 99  Q
    ||||||||| |||||||||||||  ||||||||||||| | |||||| |||||| |||||||||||| |||  | ||| |||| | ||||| |||||| |    
T  32679164 aaatcaaactacgccgcacaagatgacgaacaacacaacgccgcactcagacgatgaaatcacgaaaaaaaaccaaaataaaacaattgatatatgtgga 32679263  T
Q  100 aatcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtga 199  Q
    ||||||||||||||||||||||||| |  ||        | | ||||||| |||||||| |||||||| |||| ||||| || ||||  |||| ||||||    
T  32679264 aatcacttatttaaattgaaagaaaagataa----aattggtgcagagggatgattctatgtcaaaaaatgacataaaaccacccctcctcgacgagtga 32679359  T
Q  200 aagaggaagaaaacttagaga 220  Q
    ||||| |||||||||||||||    
T  32679360 aagagaaagaaaacttagaga 32679380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 44543296 - 44543081
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaa-acttgatgtatgtgaa 99  Q
    |||||||||||||||||| || || ||||||||||||| |||||||| |||||||||||||||  || |||||| |||||||| ||||||| | ||||||    
T  44543296 aaatcaaacaacgccgcataatacgacgaacaacacaaagtcgcacttagacgacgaaatcac--aaaaaacacaaaagaaaacacttgatatttgtgaa 44543199  T
Q  100 aatcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtga 199  Q
    ||||||||||||| || |||||||| |||||        ||| |||| || ||||| ||||||||| | | |||||||| || || |  |||||||||||    
T  44543198 aatcacttatttagatcgaaagaaa-gggaa----aaaagatgcaga-ggctgattttaggtcaaagaataacctaaaagcacccttcctcgatgagtga 44543105  T
Q  200 aagaggaagaaaacttagagagaa 223  Q
    ||||| | ||||||||||||||||    
T  44543104 aagagaaggaaaacttagagagaa 44543081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 15836209 - 15836096
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||| ||||||||| ||||||||||||||||| |||| ||||||| ||||||||||  |||||| ||| |||| |||||||||||||||||| ||||||    
T  15836209 aacgctgcacaagacgacgaacaacacaatgtcacacttagacgacaaaatcacgaa--aaacacaaaacgaaacacttgatgtatgtgaaaaccactta 15836112  T
Q  109 tttaaattgaaagaaa 124  Q
    |||||||||| |||||    
T  15836111 tttaaattgatagaaa 15836096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 10 - 178
Target Start/End: Complemental strand, 1742298 - 1742134
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcactta 108  Q
    |||| |||||||||| ||||||||||||| | |||||| ||||||||||||||| ||| ||| || |||| ||||||||||| |||||||||| ||||||    
T  1742298 aacgtcgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcac-aaaaaaatacaaaagaaaaaacttgatatatgtgaaaaccactta 1742200  T
Q  109 tttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaa 178  Q
    |||| ||||||||||| |||          |||  |||||||||||||||||||||||| ||||||||||    
T  1742199 tttagattgaaagaaaaggg----ggaaaagatggagaggggtgattctaggtcaaaaaatgacctaaaa 1742134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 47132926 - 47132797
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaa-acttgatgtatgtgaa 99  Q
    |||| |||||||||||||||| || ||||||||||||| | | |||| ||||||||||||||||||| || ||| |||||||| ||||||| |||||  |    
T  47132926 aaattaaacaacgccgcacaaaacgacgaacaacacaacgccccactcagacgacgaaatcacgaaa-aagcacaaaagaaaacacttgatatatgtaga 47132828  T
Q  100 aatcacttatttaaattgaaagaaatgggaa 130  Q
    ||||||||||||| ||||||||||| |||||    
T  47132827 aatcacttatttagattgaaagaaaagggaa 47132797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 130
Target Start/End: Original strand, 15434950 - 15435067
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaaatcacttat 109  Q
    |||||||||||||||||||||||||| || | |||||| ||||||||||||||| ||  |||||  || |||||||||||| |||||||||| |||||||    
T  15434950 aacgccgcacaagacaacgaacaacagaacgccgcacttagacgacgaaatcactaa--aaaca-aaaggaaaaacttgatttatgtgaaaaacacttat 15435046  T
Q  110 ttaaattgaaagaaatgggaa 130  Q
    ||| ||||||||||| |||||    
T  15435047 ttagattgaaagaaaagggaa 15435067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 219
Target Start/End: Complemental strand, 9341749 - 9341536
Alignment:
Q  2 aatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaa-acttgatgtatgtgaaa 100  Q
    ||||||||||||| ||||||||| |||||||||| ||     |||| |||||||||||||||| || |||||| |||||||| ||||||| |||||||||    
T  9341749 aatcaaacaacgctgcacaagacgacgaacaacataacactccactcagacgacgaaatcacgtaa-aaacacaaaagaaaacacttgatatatgtgaaa 9341651  T
Q  101 atcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatca-tccctattcgatgagtga 199  Q
    ||  |||||||| |||||||||||  ||||        ||| || |  |||||||||| |||||||| |||||||||| ||  |||| ||||||||||||    
T  9341650 atttcttatttatattgaaagaaagaggaa-----aaagatgcatacaggtgattctaagtcaaaaaatgacctaaaaccaccccctcttcgatgagtga 9341556  T
Q  200 aagaggaagaaaacttagag 219  Q
    ||||| ||||| ||||||||    
T  9341555 aagagaaagaagacttagag 9341536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 12635193 - 12634975
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaa-acttgatgtatgtgaa 99  Q
    |||||||||||||||||||||||| ||||||||||||| | |||||  ||||| | ||| ||||||  | |||| |||||||| ||||||| ||||||||    
T  12635193 aaatcaaacaacgccgcacaagacgacgaacaacacaacgccgcacacagacgtc-aaaacacgaacaagacacaaaagaaaacacttgatatatgtgaa 12635095  T
Q  100 aatcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtga 199  Q
    ||||||||||||| ||||| | || ||||||        ||| || |||||||||| ||||||| ||| |||||||||| ||  | |  |||| ||||||    
T  12635094 aatcacttatttagattgacaaaattgggaa----aaaagatgcaaaggggtgattataggtcagaaaatgacctaaaaccacacatcctcgacgagtga 12634999  T
Q  200 aagaggaagaaaacttagagagaa 223  Q
    ||||| || ||||| |||||||||    
T  12634998 aagagaaaaaaaacatagagagaa 12634975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 10 - 179
Target Start/End: Original strand, 23291717 - 23291882
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaa-acttgatgtatgtgaaaatcactta 108  Q
    |||| ||||||||| || ||||||||||| | || ||| ||||||||||||||| ||| |||||| |||||||| ||||||| |||||||||| ||||||    
T  23291717 aacgtcgcacaagataatgaacaacacaacgccgtacttagacgacgaaatcacaaaa-aaacacaaaagaaaaaacttgatatatgtgaaaaccactta 23291815  T
Q  109 tttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaat 179  Q
    |||| ||||||||||| | |||        |||   ||||||||||||||||||||||| |||||||||||    
T  23291816 tttagattgaaagaaaagagaa----aaaagatgtcgaggggtgattctaggtcaaaaaatgacctaaaat 23291882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 241
Target Start/End: Complemental strand, 18939321 - 18939112
Alignment:
Q  26 acgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcacttatttaaattgaaagaaa 124  Q
    ||||| ||||||| | | |||| ||||||||||||||| |||  ||||| ||| |||||||||||| | ||||||||  |||||||||||||||||||||    
T  18939321 acgaagaacacaacgcctcactcagacgacgaaatcacaaaa--aacacaaaatgaaaaacttgatatgtgtgaaaactacttatttaaattgaaagaaa 18939224  T
Q  125 tgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaagaaaacttagagagaaa 224  Q
     |||||        ||| ||||| ||||||||||| ||||||| |||||||||| || | ||  ||||| | |||| ||| ||||||||||||||||||     
T  18939223 ggggaa-----aaagatgcagagaggtgattctagatcaaaaaatgacctaaaaccacctctcctcgattaatgaaggagaaagaaaacttagagagaag 18939129  T
Q  225 acaaagtttctctcact 241  Q
       ||||||||||||||    
T  18939128 gtgaagtttctctcact 18939112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 35462112 - 35462225
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||| ||||||||| ||||||||||||| | |||||| | ||||||||||||| |||  ||||| |||| |||||||||||  ||||||||| ||||||    
T  35462112 aacgctgcacaagacgacgaacaacacaacgccgcacttacacgacgaaatcacaaaa--aacacaaaaggaaaaacttgatagatgtgaaaaccactta 35462209  T
Q  109 tttaaattgaaagaaa 124  Q
    ||||||||||||||||    
T  35462210 tttaaattgaaagaaa 35462225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 10 - 238
Target Start/End: Original strand, 11462523 - 11462747
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||| |||||||||| |||| || ||| ||| |||||||||||   | |||||| |||| |||||||||||  ||||||||  ||||||    
T  11462523 aacgccgcacaagacgacgaacaacaaaatgccggacttagatgacgaaatcac---aaaaacacaaaagaaaaaacttgatagatgtgaaacccactta 11462619  T
Q  109 tttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaag 208  Q
    |||| |||||||||||  ||  |       ||| ||||||||||||||||||||||||| | ||||||||||| ||||  || ||||  ||| ||| |||    
T  11462620 tttagattgaaagaaaaagg--ggaaaaaagatgcagaggggtgattctaggtcaaaaaataacctaaaatcacccctcgtcaatgaacgaaggagaaag 11462717  T
Q  209 aaaacttagagagaaaacaaagtttctctc 238  Q
    |||  |||||||||||   |||||||||||    
T  11462718 aaagtttagagagaaattgaagtttctctc 11462747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 2 - 126
Target Start/End: Original strand, 13075703 - 13075826
Alignment:
Q  2 aatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaa-actt-gatgtatgtgaa 99  Q
    ||||||||||||| |||||||||||||||||||| ||   |||||| |||||| |||||||||||| |||||| |||||||| |||| ||| ||||||      
T  13075703 aatcaaacaacgctgcacaagacaacgaacaacataaatacgcactcagacgatgaaatcacgaaa-aaacacaaaagaaaatacttagatatatgtg-- 13075799  T
Q  100 aatcacttatttaaattgaaagaaatg 126  Q
    ||||||||||||| |||||||||||||    
T  13075800 aatcacttatttagattgaaagaaatg 13075826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 19060933 - 19060805
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcac----gaaagaaacacgaaagaaaa-acttgatgtatg 95  Q
    ||||||||||||||| |||||||| ||||||||||||| |||||||| |||||||||||||||     ||| |||||  ||||||||  |||||| | ||    
T  19060933 aaatcaaacaacgccacacaagacgacgaacaacacaaggtcgcacttagacgacgaaatcacaaaaaaaaaaaacataaaagaaaacgcttgatatttg 19060834  T
Q  96 tgaaaatcacttatttaaattgaaagaaa 124  Q
    |||||||| ||||||||||| ||||||||    
T  19060833 tgaaaatcgcttatttaaatcgaaagaaa 19060805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 178
Target Start/End: Complemental strand, 45415569 - 45415412
Alignment:
Q  16 gcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaaatcacttatttaaat 115  Q
    ||||||||| |||||||||| || | |||||| ||||||||||||||| ||| |||||| | | |||||||||||  ||||||||| |||||||||||||    
T  45415569 gcacaagacgacgaacaacaaaacgccgcacttagacgacgaaatcacaaaa-aaacacaaga-aaaaacttgatagatgtgaaaaccacttatttaaat 45415472  T
Q  116 tgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaa 178  Q
    ||||||||| ||| |        |||  |||||||||||||||| ||||||| ||||||||||    
T  45415471 tgaaagaaaagggga---aaaaagatgtagaggggtgattctagatcaaaaaatgacctaaaa 45415412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 57 - 238
Target Start/End: Original strand, 37720243 - 37720418
Alignment:
Q  57 aaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaaatcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattc 156  Q
    ||||||||||| |||||| |||||||||||||||||||||| |||||||||||||| ||||||||||| | |||         |||| ||  ||||||||    
T  37720243 aaatcacgaaa-aaacacaaaagaaaaacttgatgtatgtggaaatcacttatttagattgaaagaaaggagaa----aaattataccga-aggtgattc 37720336  T
Q  157 taggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaagaaaacttagagagaaaacaaagtttctctc 238  Q
     |||||||||||| |||||| |||| | ||  || ||  ||||||||||||||||||||||| |||| | | ||||||||||    
T  37720337 aaggtcaaaaattaacctaagatcacctctcctccatatgtgaaagaggaagaaaacttagaaagaatagagagtttctctc 37720418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 151 - 250
Target Start/End: Original strand, 24012866 - 24012965
Alignment:
Q  151 tgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaagaaaacttagagagaaaacaaagtttctctcactgaaaaatta 250  Q
    |||||||||||||||||||||| ||||||||||  |  |||||||||||||||| |||| |||||||| ||||    |||||||||||||| ||||||||    
T  24012866 tgattctaggtcaaaaattgacataaaatcatctatcgtcgatgagtgaaagagaaagagaacttagaaagaatttgaagtttctctcactaaaaaatta 24012965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 7337744 - 7337851
Alignment:
Q  16 gcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcacttatttaaa 114  Q
    ||||||||| ||||||||||||| | |||||| |||||| |||||||| |||  ||||| |||| |||||||||||  ||||||||| |||||||||| |    
T  7337744 gcacaagacgacgaacaacacaacgccgcacttagacgatgaaatcacaaaa--aacacaaaaggaaaaacttgatagatgtgaaaaccacttatttaga 7337841  T
Q  115 ttgaaagaaa 124  Q
    ||||||||||    
T  7337842 ttgaaagaaa 7337851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 31692535 - 31692733
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaa 100  Q
    |||||||||||| ||||||||||| || |||||| ||||||| |||| ||||||| ||||||||||  ||||||  ||||||||||| || | |||||||    
T  31692535 aaatcaaacaacaccgcacaagacgacaaacaacgcaatgtcacactcagacgacaaaatcacgaa--aaacac--aagaaaaactt-atatgtgtgaaa 31692629  T
Q  101 atcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaa 200  Q
    |||| ||| ||| || ||||||||  ||||         || |||||||||||||| |||||||||| |||||||||||||  | |  ||||||||||||    
T  31692630 atcaattacttagatcgaaagaaa--ggaa---aaaaaaatgcagaggggtgattcaaggtcaaaaaatgacctaaaatcacacatcctcgatgagtgaa 31692724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 80 - 247
Target Start/End: Complemental strand, 45789511 - 45789349
Alignment:
Q  80 aaaaacttgatgtatgtgaaaatcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaat 179  Q
    |||||||| ||  ||||||||| |||||||||||||||||||||| |||||        ||| ||||||||||||||||||||||||| ||||||||||     
T  45789511 aaaaacttaatacatgtgaaaaccacttatttaaattgaaagaaaggggaa-----aaagatgcagaggggtgattctaggtcaaaaaatgacctaaaac 45789417  T
Q  180 catccctattcgatgagtgaaagaggaagaaaacttagagagaaaacaaagtttctctcactgaaaaa 247  Q
    ||||  |  ||||||| ||||  || || |||| ||||||||||   | ||||||||||||| |||||    
T  45789416 catcaatcctcgatgaatgaagtagaaataaaatttagagagaacgtagagtttctctcactaaaaaa 45789349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 15492298 - 15492191
Alignment:
Q  25 aacgaacaacacaatgtcgcactaagacgacgaaatcac-gaaag---aaacacgaaag-aaaaacttgatgtatgtgaaaatcacttatttaaattgaa 119  Q
    |||||||||||||| |||||||| |||||| ||||||||  ||||   |||||| |||| ||||||||||| ||||||||||||| ||||||| ||||||    
T  15492298 aacgaacaacacaacgtcgcactcagacgatgaaatcacacaaagaaaaaacacaaaagaaaaaacttgatatatgtgaaaatcatttatttagattgaa 15492199  T
Q  120 agaaatgg 127  Q
    ||||||||    
T  15492198 agaaatgg 15492191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 8211985 - 8212098
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||| | ||||||||||| | |||| | |||||||||||||||  || |||||| ||| | |||||||||| |||||||||| ||||||    
T  8211985 aacgccgcacaagacgatgaacaacacaacgccgcatttagacgacgaaatcac--aaaaaacacaaaagggaaaacttgatatatgtgaaaaccactta 8212082  T
Q  109 tttaaattgaaagaaa 124  Q
    |||| ||| |||||||    
T  8212083 tttagatttaaagaaa 8212098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 14872657 - 14872544
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaa-agaaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||| ||||||||||||||| ||||||  |||||| |||||||  || |||||| ||  |||||||||||| | ||| |||| ||||||    
T  14872657 aacgccgcacaagacgacgaacaacacaatgccgcacttggacgacaaaatcac--aaaaaacacaaatggaaaaacttgatatttgtaaaaaccactta 14872560  T
Q  109 tttaaattgaaagaaa 124  Q
    |||| |||||||||||    
T  14872559 tttacattgaaagaaa 14872544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 218
Target Start/End: Complemental strand, 21686890 - 21686686
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcac-gaaagaaacacgaaagaaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||| ||||||||||||| | || ||| |||||||||||||||  ||| ||| |  ||| ||||||||||  |  ||||||| ||||||    
T  21686890 aacgccgcacaagacgacgaacaacacaacgccgtacttagacgacgaaatcacaaaaaaaaaaaaaaaaaaaaaacttgaaatgggtgaaaaccactta 21686791  T
Q  109 tttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaag 208  Q
    ||||||||||||||||  ||||        |||  ||| | |||||||||| ||||||| ||||||||||||||| ||  |||||||  ||||||| |||    
T  21686790 tttaaattgaaagaaaatggaa----aaaagatgtaga-gagtgattctagatcaaaaaatgacctaaaatcatctctcctcgatgaacgaaagagaaag 21686696  T
Q  209 aaaacttaga 218  Q
    |||| |||||    
T  21686695 aaaatttaga 21686686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 10877504 - 10877437
Alignment:
Q  5 caaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    ||||||||||| ||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||    
T  10877504 caaacaacgccacacaaagacaacgaacaaaacaacgtcgcactaagatgacgaaatcacgaaagaaa 10877437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 130
Target Start/End: Complemental strand, 31984176 - 31984078
Alignment:
Q  29 aacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaaatcacttatttaaattgaaagaaatggg 128  Q
    |||||||||| | |||||| ||||||||||||||| |||  ||||| || |||||||||||| |||||||||| |||||||||| || |||||||| |||    
T  31984176 aacaacacaacgccgcacttagacgacgaaatcacaaaa--aacac-aaggaaaaacttgatatatgtgaaaaccacttatttagatcgaaagaaaaggg 31984080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 5983853 - 5983741
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||| |||||||||| || | |||||| |||||||||||||||   | |||||| |||| |||||||||||  ||||||||| || |||    
T  5983853 aacgccgcacaagacgacgaacaacaaaacgccgcacttagacgacgaaatcac---aaaaacacaaaagcaaaaacttgatagatgtgaaaaccattta 5983757  T
Q  109 tttaaattgaaagaaa 124  Q
    |||| || ||||||||    
T  5983756 tttagatcgaaagaaa 5983741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 15 - 130
Target Start/End: Original strand, 35484471 - 35484585
Alignment:
Q  15 cgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcacttatttaa 113  Q
    |||||||||| ||||||||||||| | |||||| ||||||||||| |||  || |||||| |  | |||||||||||  ||||||||| ||||||||||     
T  35484471 cgcacaagacgacgaacaacacaacgccgcacttagacgacgaaaccac--aaaaaacacaattgaaaaaacttgatagatgtgaaaaccacttatttag 35484568  T
Q  114 attgaaagaaatgggaa 130  Q
    ||||||||||| |||||    
T  35484569 attgaaagaaaagggaa 35484585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 40163581 - 40163688
Alignment:
Q  16 gcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaaatcacttatttaaat 115  Q
    ||||||||| ||||| ||||||| ||| |||| |||||||||||||| |||| ||||||  |  ||||| ||||| |||||| |||||||||||||| ||    
T  40163581 gcacaagacgacgaagaacacaacgtcacactgagacgacgaaatcatgaaa-aaacacagataaaaaatttgatatatgtggaaatcacttatttatat 40163679  T
Q  116 tgaaagaaa 124  Q
     ||||||||    
T  40163680 agaaagaaa 40163688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 940380 - 940268
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaaatcacttat 109  Q
    |||| |||||||||| || ||||||||||   |||||| |||||||| |||||| ||| | ||| | ||  |||||||||| |||||||||| |||||||    
T  940380 aacgtcgcacaagacgacaaacaacacaacaccgcacttagacgacggaatcacaaaaaacacaaggaa--aaaacttgatatatgtgaaaaccacttat 940283  T
Q  110 ttaaattgaaagaaa 124  Q
    ||||||| |||||||    
T  940282 ttaaattaaaagaaa 940268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 8893451 - 8893384
Alignment:
Q  5 caaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    ||||||||||| ||||| ||| |||| ||||||||||||| |||||||||| ||||||||||||||||    
T  8893451 caaacaacgcctcacaaagacgacgagcaacacaatgtcgtactaagacgatgaaatcacgaaagaaa 8893384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 13144893 - 13145000
Alignment:
Q  16 gcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcacttatttaaa 114  Q
    ||||||||||||  ||||||||| | |||| | ||||||||||||||  ||| |||||| |||| ||||| ||||| ||| |||||| |||||||||| |    
T  13144893 gcacaagacaacagacaacacaacgccgcatttagacgacgaaatca--aaaaaaacacaaaaggaaaaagttgatatatatgaaaaccacttatttaga 13144990  T
Q  115 ttgaaagaaa 124  Q
    ||||||||||    
T  13144991 ttgaaagaaa 13145000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 41994450 - 41994336
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtg-a 98  Q
    |||||||||||||| ||||||||| | ||||||||||| | |||| | |||||  |||||||| ||| ||| ||  ||| ||||||||||| |||||| |    
T  41994450 aaatcaaacaacgctgcacaagacgatgaacaacacaacgccgcattcagacgttgaaatcacaaaaaaaaaacacaagaaaaaacttgatatatgtgaa 41994351  T
Q  99 aaatcacttatttaa 113  Q
    |||||||||||||||    
T  41994350 aaatcacttatttaa 41994336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 124
Target Start/End: Original strand, 21947704 - 21947806
Alignment:
Q  21 agacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaa-acttgatgtatgtgaaaatcacttatttaaattgaa 119  Q
    |||| ||||||||||||  |  ||||| ||||||||||||||| |||  ||||| |||||||| |||||||  ||||||||| |||||||||| ||||||    
T  21947704 agacgacgaacaacacagcgctgcacttagacgacgaaatcacaaaa--aacacaaaagaaaaaacttgatagatgtgaaaaccacttatttagattgaa 21947801  T
Q  120 agaaa 124  Q
    |||||    
T  21947802 agaaa 21947806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 211
Target Start/End: Original strand, 34878357 - 34878543
Alignment:
Q  14 ccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaaatcacttatttaa 113  Q
    ||||||||||| ||||||||||||| | || ||| | |||||||| |||| ||| |||||      ||||||||||| | |||||||| |||||||||||    
T  34878357 ccgcacaagacgacgaacaacacaacgccgtacttaaacgacgaagtcacaaaa-aaaca------aaaaacttgatatgtgtgaaaaccacttatttaa 34878449  T
Q  114 attgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaagaaa 211  Q
    |||||||||||  ||||        |||  ||| | |||||||||||||||||| |||||||||| || ||||  |||||||  ||||||| ||||||    
T  34878450 attgaaagaaaatggaa----aaaagatgtagatgagtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaagagaaagaaa 34878543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 31317760 - 31317655
Alignment:
Q  17 cacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcacttatttaaat 115  Q
    |||||||| ||||| |||||||   |||||| | |||||||||| || |||  ||||| ||| |||||||||||| | |||||||| |||||||||||||    
T  31317760 cacaagacgacgaataacacaacaccgcactcacacgacgaaattacaaaa--aacacaaaatgaaaaacttgatatgtgtgaaaaccacttatttaaat 31317663  T
Q  116 tgaaagaa 123  Q
    ||||||||    
T  31317662 tgaaagaa 31317655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 143 - 223
Target Start/End: Complemental strand, 34528607 - 34528527
Alignment:
Q  143 cagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaagaaaacttagagagaa 223  Q
    ||||||||||||||||||||||||| |||| ||||| ||  | | ||||||||||||||||  ||||||||| ||| ||||    
T  34528607 cagaggggtgattctaggtcaaaaaatgacataaaaccactcatcttcgatgagtgaaagaaaaagaaaactaagacagaa 34528527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 27469664 - 27469731
Alignment:
Q  5 caaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    ||||||||| ||||||| ||| | |||||| |||| |||||||||||||||||||||||| |||||||    
T  27469664 caaacaacgtcgcacaaagacgatgaacaaaacaacgtcgcactaagacgacgaaatcacaaaagaaa 27469731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 24582974 - 24582912
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcac 63  Q
    |||||||||||||||||||||| | | ||||||||||| ||| |||| ||||||| |||||||    
T  24582974 aaatcaaacaacgccgcacaaggcgatgaacaacacaaggtcacacttagacgacaaaatcac 24582912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 222
Target Start/End: Original strand, 29738841 - 29738919
Alignment:
Q  144 agaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaagaaaacttagagaga 222  Q
    |||||||||||||||||| |||||||||||||||| || ||||  |||||||  ||| ||| ||||||  |||||||||    
T  29738841 agaggggtgattctaggtaaaaaattgacctaaaaccacccctcctcgatgaacgaaggagaaagaaagtttagagaga 29738919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 33703466 - 33703540
Alignment:
Q  5 caaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa 78  Q
    ||||||||| ||||||| ||| || ||||| |||| | || ||||||||||||||||||||||||||| ||||||    
T  33703466 caaacaacgtcgcacaaagacgacaaacaaaacaacgccgtactaagacgacgaaatcacgaaagaaaaacgaaa 33703540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 34528753 - 34528695
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaa 59  Q
    |||||||||||| |||| |||||| ||||||||||||||| |||||| |||||| ||||    
T  34528753 aaatcaaacaacaccgcgcaagacgacgaacaacacaatgccgcacttagacgatgaaa 34528695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 7836871 - 7836932
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    |||| |||||||||| ||||||||||||| | |||||| |||||| |||||||| |||||||    
T  7836871 aacgtcgcacaagacgacgaacaacacaacgccgcacttagacgatgaaatcacaaaagaaa 7836932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 26199737 - 26199680
Alignment:
Q  6 aaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatca 62  Q
    |||||||| ||||||| ||| |||||||| |||||||||||||||||||| |||||||    
T  26199737 aaacaacgtcgcacaaagacgacgaacaaaacaatgtcgcactaagacgatgaaatca 26199680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 29837661 - 29837726
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaa 66  Q
    ||||||||||||| ||||||||||| ||||||||||| || | |||| | |||||||||| |||||    
T  29837661 aaatcaaacaacgtcgcacaagacatcgaacaacacattgccacactcatacgacgaaataacgaa 29837726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 52839666 - 52839621
Alignment:
Q  26 acgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    |||||||| |||| |||||||||||||||| |||||||||||||||    
T  52839666 acgaacaaaacaacgtcgcactaagacgacaaaatcacgaaagaaa 52839621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 12148023 - 12148071
Alignment:
Q  23 acaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    ||||||||||| |||| ||| ||||||||||||| ||||||||||||||    
T  12148023 acaacgaacaaaacaaagtcacactaagacgacggaatcacgaaagaaa 12148071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 195
Target Start/End: Complemental strand, 32395009 - 32394835
Alignment:
Q  16 gcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcacttatttaaa 114  Q
    ||||||||| | || |||||||| | ||||||   ||||||||||||| |||  ||||| |||| |||||||||||  ||||||||| |||| ||||| |    
T  32395009 gcacaagacgatgagcaacacaacgccgcacttgaacgacgaaatcacaaaa--aacacaaaaggaaaaacttgatagatgtgaaaaccactcatttaga 32394912  T
Q  115 ttgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatga 195  Q
    |||||||||| ||| |        ||| ||||||| |||||||| |||||||| |||||||||| || ||||  |||||||    
T  32394911 ttgaaagaaaagggga----aaaagatgcagagggatgattctaagtcaaaaaatgacctaaaaccacccctcctcgatga 32394835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 33177576 - 33177620
Alignment:
Q  27 cgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    |||||||||||| ||||||||||||| | ||||||||||||||||    
T  33177576 cgaacaacacaacgtcgcactaagacaatgaaatcacgaaagaaa 33177620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 309
Target Start/End: Original strand, 46584789 - 46584829
Alignment:
Q  269 gtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  46584789 gtttcgtcaattatcccctgaaattaacaaaacttcaatta 46584829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 40488369 - 40488420
Alignment:
Q  20 aagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    ||||| || ||||| |||| |||||||||||||||||||||||| |||||||    
T  40488369 aagacgacaaacaaaacaacgtcgcactaagacgacgaaatcacaaaagaaa 40488420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 5701303 - 5701269
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  5701303 aaatcaaacaacgccgcacaagacgacgaacaaca 5701269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 7997833 - 7997799
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  7997833 aaatcaaacaacgccgcacaagacgacgaacaaca 7997799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 11121112 - 11121070
Alignment:
Q  26 acgaacaacacaatgtcgcactaagacgacgaaatcacgaaag 68  Q
    |||||||||||||  ||||||||||||||||||||||| ||||    
T  11121112 acgaacaacacaacctcgcactaagacgacgaaatcacaaaag 11121070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 309
Target Start/End: Original strand, 16834397 - 16834439
Alignment:
Q  267 aagtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    |||||||||||| || ||||||| |||||||||||||||||||    
T  16834397 aagtttcgtcaattaccccctgaaattaacaaaacttcaatta 16834439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 309
Target Start/End: Original strand, 18053722 - 18053764
Alignment:
Q  267 aagtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    ||||||| |||| |||||||||| |||||||||||||||||||    
T  18053722 aagtttcatcaattatcccctgaaattaacaaaacttcaatta 18053764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 309
Target Start/End: Complemental strand, 18542341 - 18542299
Alignment:
Q  267 aagtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    |||||||||||| || ||||||||||||||||||||| |||||    
T  18542341 aagtttcgtcaattaccccctgacattaacaaaactttaatta 18542299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 309
Target Start/End: Complemental strand, 26615873 - 26615831
Alignment:
Q  267 aagtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    ||||||||| || ||||| ||||||||||||||||||||||||    
T  26615873 aagtttcgtgaattatcctctgacattaacaaaacttcaatta 26615831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 28035183 - 28035149
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  28035183 aaatcaaacaacgccgcacaagacgacgaacaaca 28035149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 35584655 - 35584689
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  35584655 aaatcaaacaacgccgcacaagacgacgaacaaca 35584689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 40881049 - 40881083
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  40881049 aaatcaaacaacgccgcacaagacgacgaacaaca 40881083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 45426103 - 45426137
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  45426103 aaatcaaacaacgccgcacaagacgacgaacaaca 45426137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 10776536 - 10776589
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcac 63  Q
    ||||||||| ||||| ||||||||||||| | |||||| ||||||| |||||||    
T  10776536 aacgccgcataagacgacgaacaacacaacgccgcacttagacgactaaatcac 10776589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 23039728 - 23039773
Alignment:
Q  26 acgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    |||||||| |||| ||||||||||||| || |||||||||||||||    
T  23039728 acgaacaaaacaacgtcgcactaagaccacaaaatcacgaaagaaa 23039773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 124
Target Start/End: Complemental strand, 26535343 - 26535298
Alignment:
Q  79 gaaaaacttgatgtatgtgaaaatcacttatttaaattgaaagaaa 124  Q
    ||||||||| || |||||||||| |||||||||| |||||||||||    
T  26535343 gaaaaacttaatatatgtgaaaaccacttatttagattgaaagaaa 26535298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 124
Target Start/End: Original strand, 30506319 - 30506364
Alignment:
Q  80 aaaaacttgatgtatgtgaaaatcacttattta-aattgaaagaaa 124  Q
    ||||||||||| |||||||||||||| |||||| ||||||||||||    
T  30506319 aaaaacttgatatatgtgaaaatcacctatttagaattgaaagaaa 30506364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 71
Target Start/End: Original strand, 35077872 - 35077913
Alignment:
Q  30 acaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    |||| |||| |||| |||||||||||||||||||||||||||    
T  35077872 acaaaacaacgtcgtactaagacgacgaaatcacgaaagaaa 35077913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 124
Target Start/End: Original strand, 51916795 - 51916840
Alignment:
Q  79 gaaaaacttgatgtatgtgaaaatcacttatttaaattgaaagaaa 124  Q
    |||||||||||| ||| |||||| |||||||||| |||||||||||    
T  51916795 gaaaaacttgatttatttgaaaaccacttatttagattgaaagaaa 51916840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 124
Target Start/End: Complemental strand, 1602094 - 1602019
Alignment:
Q  48 aagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaaatcacttatttaaattgaaagaaa 124  Q
    ||||||||||||||| |||| | |||||||||| ||||||||| ||| |  ||| |||||||||| || ||||||||    
T  1602094 aagacgacgaaatcatgaaa-agacacgaaagataaacttgatatatatagaaaccacttatttagatcgaaagaaa 1602019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 2350780 - 2350716
Alignment:
Q  5 caaacaacgccgcaca-agacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaag 68  Q
    ||||||||| |||||| |||| || ||||| |||| |||||||||||||||| ||||||| ||||    
T  2350780 caaacaacgtcgcacagagacgaccaacaaaacaacgtcgcactaagacgactaaatcacaaaag 2350716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 120
Target Start/End: Complemental strand, 5701219 - 5701191
Alignment:
Q  92 tatgtgaaaatcacttatttaaattgaaa 120  Q
    |||||||||||||||||||||||||||||    
T  5701219 tatgtgaaaatcacttatttaaattgaaa 5701191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 238
Target Start/End: Complemental strand, 5983717 - 5983629
Alignment:
Q  150 gtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaagaaaacttagagagaaaacaaagtttctctc 238  Q
    |||||||||||||||||| ||| |||||| |||||||  |||||||  ||| ||| || |||  ||||||||||   ||||||||||||    
T  5983717 gtgattctaggtcaaaaaatgatctaaaaccatccctcctcgatgaacgaaggagaaataaagtttagagagaagttaaagtttctctc 5983629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 224
Target Start/End: Original strand, 10776669 - 10776745
Alignment:
Q  148 gggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaagaaaacttagagagaaa 224  Q
    |||||||||||||||||||| ||| |||||| || || |  ||||||| |||| ||| ||||||  |||||||||||    
T  10776669 gggtgattctaggtcaaaaaatgatctaaaaccacccttcctcgatgaatgaaggagaaagaaagtttagagagaaa 10776745  T

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Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 120
Target Start/End: Original strand, 30818452 - 30818492
Alignment:
Q  80 aaaaacttgatgtatgtgaaaatcacttatttaaattgaaa 120  Q
    ||||||| ||| ||||||||||||||||||||| |||||||    
T  30818452 aaaaactagatttatgtgaaaatcacttatttagattgaaa 30818492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 124
Target Start/End: Complemental strand, 31918937 - 31918893
Alignment:
Q  80 aaaaacttgatgtatgtgaaaatcacttatttaaattgaaagaaa 124  Q
    ||||||||||| |||||||||| |||||||||| ||||| |||||    
T  31918937 aaaaacttgatatatgtgaaaaccacttatttagattgatagaaa 31918893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 124
Target Start/End: Complemental strand, 34479439 - 34479395
Alignment:
Q  80 aaaaacttgatgtatgtgaaaatcacttatttaaattgaaagaaa 124  Q
    ||||||||||| | |||||||| |||||||||||||| |||||||    
T  34479439 aaaaacttgatatgtgtgaaaaccacttatttaaattaaaagaaa 34479395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 34566846 - 34566782
Alignment:
Q  5 caaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaag 68  Q
    ||||||||| ||||||| ||| || ||||| |||  |||||||||||||||||||||||| ||||    
T  34566846 caaacaacgtcgcacaaagacgacaaacaaaacagggtcgcactaagacgacgaaatcacaaaag 34566782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 39927591 - 39927627
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacaca 37  Q
    ||||||||||||||| |||||||| ||||||||||||    
T  39927591 aaatcaaacaacgccacacaagacgacgaacaacaca 39927627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 39987433 - 39987401
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaa 33  Q
    |||||||||||||||||||||||| ||||||||    
T  39987433 aaatcaaacaacgccgcacaagacgacgaacaa 39987401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 44744685 - 44744645
Alignment:
Q  269 gtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    |||||||||| || ||||||| |||||||||||||||||||    
T  44744685 gtttcgtcaattaccccctgaaattaacaaaacttcaatta 44744645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 50377214 - 50377174
Alignment:
Q  144 agaggggtgattctaggtcaaaaattgacctaaaatcatcc 184  Q
    |||||| ||||||||||||||||| |||||||||| |||||    
T  50377214 agagggatgattctaggtcaaaaaatgacctaaaaccatcc 50377174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 124
Target Start/End: Complemental strand, 50377261 - 50377229
Alignment:
Q  92 tatgtgaaaatcacttatttaaattgaaagaaa 124  Q
    |||||||||| ||||||||||||||||||||||    
T  50377261 tatgtgaaaaccacttatttaaattgaaagaaa 50377229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0888 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 1751 - 1985
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaa 100  Q
    |||||||||||||||| ||||||| |||||||||| || ||||||||||||||||||||||||||||||||           ||||||||||||||||||    
T  1751 aaatcaaacaacgccggacaagacgacgaacaacagaacgtcgcactaagacgacgaaatcacgaaagaaa-----------aacttgatgtatgtgaaa 1839  T
Q  101 atcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaa 200  Q
    |||||||||||| ||||||||||| |||||        ||| ||||| |||||||||||||||||||||||||||| |||| ||||  ||||| ||||||    
T  1840 atcacttatttagattgaaagaaaggggaa----aaaagatgcagagaggtgattctaggtcaaaaattgacctaatatcacccctcctcgataagtgaa 1935  T
Q  201 agaggaagaaaacttagagagaaaacaaagtttctctcactgaaaaatta 250  Q
    ||||||||||||| ||||||||| ||| ||||||||||||| ||||||||    
T  1936 agaggaagaaaacgtagagagaagacagagtttctctcactaaaaaatta 1985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 115; Significance: 2e-58; HSPs: 113)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 27651980 - 27651746
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaa 100  Q
    |||||||||||| ||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||           ||||||||||||||||||    
T  27651980 aaatcaaacaacaccgcacaagacgacgaacaacacaacgttgcactaagacgacgaaatcacgaaagaaa-----------aacttgatgtatgtgaaa 27651892  T
Q  101 atcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaa 200  Q
    |||||||||||| |||||||||||||||||        ||| |||| ||||||| ||||||||||||||||||||| |||| ||||  ||||||||||||    
T  27651891 atcacttatttagattgaaagaaatgggaa----aaaagatgcagatgggtgatcctaggtcaaaaattgacctaacatcacccctcctcgatgagtgaa 27651796  T
Q  201 agaggaagaaaacttagagagaaaacaaagtttctctcactgaaaaatta 250  Q
    |||||||||||| |||||||||| ||| | ||||||||||| ||||||||    
T  27651795 agaggaagaaaatttagagagaagacagaatttctctcactaaaaaatta 27651746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 36194745 - 36194510
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaa 100  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||           ||||||||||||||||||    
T  36194745 aaatcaaacaacgccgcacaagacgacgaacaacacaacgtcgcactaagacaacgaaatcacgaaagaaa-----------aacttgatgtatgtgaaa 36194657  T
Q  101 atcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaa 200  Q
    |||||||||||||||||||||||| | |||        ||| ||||||| || || ||||||||||||||| ||||||||| || |  ||||| ||||||    
T  36194656 atcacttatttaaattgaaagaaaggagaa----aaaagatgcagagggatgtttttaggtcaaaaattgatctaaaatcacccatcctcgataagtgaa 36194561  T
Q  201 agaggaagaaaacttagagagaaaacaaagtttctctcactgaaaaattaa 251  Q
    ||||||||||||||||||||||| ||||| ||||||||||| |||||||||    
T  36194560 agaggaagaaaacttagagagaagacaaaatttctctcactaaaaaattaa 36194510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 18935818 - 18935589
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaa 100  Q
    |||||||||||||| ||||||||| ||||||| ||||| |||  | |||||||||||||||||||| ||||           ||||||||||||||||||    
T  18935818 aaatcaaacaacgctgcacaagacgacgaacagcacaacgtcaaattaagacgacgaaatcacgaacgaaa-----------aacttgatgtatgtgaaa 18935730  T
Q  101 atcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaa 200  Q
    |||||| ||||| ||| ||||||| |||||        ||| ||||||| |||||||||||||||||||||||| |||||| ||||  |||||||| |||    
T  18935729 atcactaatttagattaaaagaaaggggaa----aaaagatgcagaggg-tgattctaggtcaaaaattgaccttaaatcacccctcctcgatgagcgaa 18935635  T
Q  201 agaggaagaaaacttagagagaaaacaaagtttctctcactgaaaa 246  Q
    ||||||||||||||||||||||| ||| ||||||||||||| ||||    
T  18935634 agaggaagaaaacttagagagaagacagagtttctctcactaaaaa 18935589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 22300889 - 22300670
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaa-aacttgatgtatgtgaa 99  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||  ||||||||||||||||||| ||  || |||||||  ||||||| || |||||    
T  22300889 aaatcaaacaacgccgcacaagacgacgaacaacacaacgtcgcacacagacgacgaaatcacgaaaaaagtacaaaagaaagcacttgatatacgtgaa 22300790  T
Q  100 aatcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtga 199  Q
    ||||||||||||||||||||||||| | |||        ||| || |||||||||| ||||||||||| |||||||||| ||  |||  |||| ||||||    
T  22300789 aatcacttatttaaattgaaagaaaagagaa----aaaggatgcaaaggggtgattttaggtcaaaaaatgacctaaaaccactcctcctcgacgagtga 22300694  T
Q  200 aagaggaagaaaacttagagagaa 223  Q
    ||||| || |||| ||||||||||    
T  22300693 aagagaaataaaatttagagagaa 22300670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 186
Target Start/End: Complemental strand, 35348341 - 35348168
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa-cacgaaagaaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||| ||||||||||||| | |||||| ||||||||||||||| ||| ||| ||| ||||||||||||||| | |||||||| ||||||    
T  35348341 aacgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcacaaaaaaaaacacaaaagaaaaacttgatatttgtgaaaaccactta 35348242  T
Q  109 tttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccct 186  Q
    |||| ||||||||||| |||||        |||  |||| ||||||||||||||||||| ||||||||||||| ||||    
T  35348241 tttagattgaaagaaaagggaa----aaaagatgtagagaggtgattctaggtcaaaaaatgacctaaaatcacccct 35348168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 31891360 - 31891477
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaa 100  Q
    ||||||||||||||  |||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||     |||||| |||    
T  31891360 aaatcaaacaacgctacacaagacgacgaacaacacaacgtcgcactaagacgacgaaatcacgaaa-aaacacgaaagaaaaac-----gtatgtaaaa 31891453  T
Q  101 atcacttatttaaattgaaagaaa 124  Q
    |||||||||||| |||||||||||    
T  31891454 atcacttatttagattgaaagaaa 31891477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 167 - 261
Target Start/End: Original strand, 31891495 - 31891589
Alignment:
Q  167 attgacctaaaatcatccctattcgatgagtgaaagaggaagaaaacttagagagaaaacaaagtttctctcactgaaaaattaaatatatattt 261  Q
    ||||||| ||||||| |||| ||| |||||||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||    
T  31891495 attgaccaaaaatcacccctcttcaatgagtgaaagaggaagaaaacttagagagaagacaaagtttcactcactaaaaaattaaatatatattt 31891589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 51888280 - 51888497
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacg-aaagaaacacgaaagaaaa-acttgatgtatgtga 98  Q
    ||||||||||||| |||| ||||| | ||||||||||| | |||||| |||| ||||||||||| ||| |||||| |||||||| ||||||| |||||||    
T  51888280 aaatcaaacaacgtcgcataagacgatgaacaacacaacgccgcactcagacaacgaaatcacgaaaaaaaacacaaaagaaaacacttgatatatgtga 51888379  T
Q  99 aaatcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtg 198  Q
    ||||||||| |||| || | |||||| ||||         |||  ||||||||||||| | |||||||| |||||||||| || ||||  ||||||||||    
T  51888380 aaatcacttgtttagatcggaagaaagggga----taaaagattgagaggggtgattcaatgtcaaaaaatgacctaaaaccacccctcctcgatgagtg 51888475  T
Q  199 aaagaggaagaaaacttagaga 220  Q
    |||||| |||||||| ||||||    
T  51888476 aaagagaaagaaaacgtagaga 51888497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 9643428 - 9643202
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacg---aaagaaacacgaaagaaaa-acttgatgtatgt 96  Q
    ||||||||||||| ||| |||||| ||||||||||||| ||||||||  ||||||||||| |||   | | |||||| |||||||| || |||| |||||    
T  9643428 aaatcaaacaacgtcgctcaagacgacgaacaacacaacgtcgcactcggacgacgaaattacgggaacaaaaacacaaaagaaaacacatgatatatgt 9643329  T
Q  97 gaaaatcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatca-tccctattcgatga 195  Q
    |||||||||||||||| || ||||||||||||||        ||| |||| | |||||||||||||||||| |||| ||||| ||  |||| ||||||||    
T  9643328 gaaaatcacttatttagatcgaaagaaatgggaa-aaaaaaagatgcagatgagtgattctaggtcaaaaaatgacataaaaccaccccctcttcgatga 9643230  T
Q  196 gtgaaagaggaagaaaacttagagagaa 223  Q
    |  |||||  ||||||||||||||||||    
T  9643229 gcaaaagataaagaaaacttagagagaa 9643202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 4142821 - 4143010
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaa 99  Q
    |||||||||  ||||||||||||| ||||||||||||| | |||||| |||||||||||||||  || |||||| ||| ||||||||||||  |||||||    
T  4142821 aaatcaaacgccgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcac--aaaaaacacaaaaggaaaaacttgatagatgtgaa 4142918  T
Q  100 aatcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatga 195  Q
    || |||||||||| ||||||||||| ||| |        |||  |||||||||||||||||||||||| |||||||||| || ||||  |||||||    
T  4142919 aa-cacttatttagattgaaagaaaagggga---aaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatga 4143010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 36161751 - 36161563
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaa 100  Q
    ||||||||||||| ||||||||||||||||||| ||||   |||||| |||||| |||||||| ||| |||||| ||| ||||  ||||| ||||| |||    
T  36161751 aaatcaaacaacgacgcacaagacaacgaacaaaacaacc-cgcactcagacgaagaaatcacaaaa-aaacacaaaaaaaaa--ttgatatatgtaaaa 36161656  T
Q  101 atcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtga 199  Q
    |||||||||||| |||||||||||||||||         || |||| |||||||||||||||||||| |||||||||| || | ||  |||||||||||    
T  36161655 atcacttatttagattgaaagaaatgggaa------aaaatgcagatgggtgattctaggtcaaaaaatgacctaaaaccacctctcctcgatgagtga 36161563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 123
Target Start/End: Complemental strand, 5119373 - 5119261
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||||| ||||||||||||||||||||  |||||| |||||||||||||||  |  |||||| ||| |||||||||||| |||||||||| ||||||    
T  5119373 aacgccgcaaaagacaacgaacaacacaataccgcacttagacgacgaaatcac--acaaaacacaaaaggaaaaacttgatatatgtgaaaaccactta 5119276  T
Q  109 tttaaattgaaagaa 123  Q
    |||| ||||||||||    
T  5119275 tttagattgaaagaa 5119261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 28857441 - 28857339
Alignment:
Q  2 aatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaa-acttgatgtatgtgaaa 100  Q
    ||||||||||||||||||||||||||||||||||||| | |||||| |||||| |||||||| ||| ||||||  ||||||| ||||||| |||||||||    
T  28857441 aatcaaacaacgccgcacaagacaacgaacaacacaacgccgcacttagacgatgaaatcac-aaaaaaacac--aagaaaacacttgatatatgtgaaa 28857345  T
Q  101 atcact 106  Q
    ||||||    
T  28857344 atcact 28857339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 15 - 223
Target Start/End: Complemental strand, 13634144 - 13633939
Alignment:
Q  15 cgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcacttatttaa 113  Q
    |||||||||| ||||||||||||| | |||||| |||||||||||||||  || |||||| |||| |||||||||||  ||||||||| ||||||||||     
T  13634144 cgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcac--aaaaaacacaaaagaaaaaacttgatagatgtgaaaaccacttatttag 13634047  T
Q  114 attgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaagaaaac 213  Q
    ||||||||||| |||  |       |||  ||||||||||||||| |||||||| |||||||||| || | ||  |||||||| ||| ||| ||||||      
T  13634046 attgaaagaaaaggg-gggggaaaagatgtagaggggtgattctatgtcaaaaa-tgacctaaaaccaccactcctcgatgagcgaaggagaaagaaagt 13633949  T
Q  214 ttagagagaa 223  Q
    ||||||||||    
T  13633948 ttagagagaa 13633939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 13 - 124
Target Start/End: Original strand, 26633749 - 26633859
Alignment:
Q  13 gccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcacttattt 111  Q
    |||||||||||| ||||||||||||| | |||||| |||||||||||||||  || |||||| |||| |||||||||||  ||||||||| |||||||||    
T  26633749 gccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcac--aaaaaacacaaaagaaaaaacttgatagatgtgaaaaccacttattt 26633846  T
Q  112 aaattgaaagaaa 124  Q
    | |||||||||||    
T  26633847 agattgaaagaaa 26633859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 47320460 - 47320709
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcac------gaaagaaacacgaaagaaaa-acttgatgta 93  Q
    |||||||||||||||||||||||| ||||||||||||| |||  ||| |||||||||||||||       ||| |||||| ||||||||  |||||| |     
T  47320460 aaatcaaacaacgccgcacaagacgacgaacaacacaaggtcttacttagacgacgaaatcacaaaaaaaaaaaaaacacaaaagaaaacgcttgatatt 47320559  T
Q  94 tgtgaaaatcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgat 193  Q
    ||||||||||||||||||| || ||| |||| |||||        ||| |||||  |||||| || |||||| | |||||||||| || ||||  |||||    
T  47320560 tgtgaaaatcacttatttagatcgaacgaaaggggaa----aaaagatgcagagttgtgattttaagtcaaagaatgacctaaaaccaccccttctcgat 47320655  T
Q  194 gagtgaaagaggaagaaaacttagagagaaaacaaagtttctctcactgaaaaa 247  Q
    ||| ||||||| | ||||||||| ||||||    |||||||||||||| |||||    
T  47320656 gagcgaaagagaaggaaaacttaaagagaagttgaagtttctctcactaaaaaa 47320709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 22611217 - 22611104
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||| ||||||||||||| | |||||| |||||||||||||||  || |||||| ||| || |||||||||  ||||||||| ||||||    
T  22611217 aacgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcac--aaaaaacacaaaaggataaacttgatagatgtgaaaaccactta 22611120  T
Q  109 tttaaattgaaagaaa 124  Q
    |||| |||||||||||    
T  22611119 tttagattgaaagaaa 22611104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 223
Target Start/End: Complemental strand, 53811062 - 53810853
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaa-aacttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||| |||||||||| || | |||| | ||| |||||||| || |||  ||||| |||| || ||||||||  ||||||||||||||||    
T  53811062 aacgccgcacaagacgacgaacaacaaaacgccgcatttagatgacgaaatgacaaaa--aacacaaaaggaataacttgatagatgtgaaaatcactta 53810965  T
Q  109 tttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaag 208  Q
    |||||||||||||||| ||   |       |||  |||||||||||| ||||||||||| |||||||||| || ||||  |||||||  ||| |||||||    
T  53810964 tttaaattgaaagaaaagg---gggaaaaagatgtagaggggtgattataggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggaggaag 53810868  T
Q  209 aaaacttagagagaa 223  Q
    |||  ||||||||||    
T  53810867 aaagtttagagagaa 53810853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 10 - 178
Target Start/End: Complemental strand, 32766548 - 32766384
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaaatcacttat 109  Q
    ||||||||||||||| |||||||||||||   |||||| ||||||||||||||| ||| || ||  || ||||||||||||  ||||||||| ||||||     
T  32766548 aacgccgcacaagacgacgaacaacacaacaccgcacttagacgacgaaatcac-aaaaaaccaaaaaggaaaaacttgatagatgtgaaaaacacttac 32766450  T
Q  110 ttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaa 178  Q
    ||| ||||||||||| ||| |        |||  |||||||||||||||||||||||| ||||||||||    
T  32766449 ttagattgaaagaaaagggga---aaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaa 32766384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 36204453 - 36204664
Alignment:
Q  1 aaatcaaacaacgcc-gcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaa 99  Q
    ||||||||||||||| | ||| ||| ||||||||||||| | |||||| |||||||||||||||||| |||| |      ||| ||||||| |||||| |    
T  36204453 aaatcaaacaacgcccgtacaggacgacgaacaacacaacgccgcacttagacgacgaaatcacgaa-gaaaaa------aaacacttgatctatgtgga 36204545  T
Q  100 aatcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtga 199  Q
    |||||||||||||||| ||||||||  ||||         || ||||||||||||||||||| ||||| |||||||||| ||||| |  | ||||| |||    
T  36204546 aatcacttatttaaatcgaaagaaaaaggaaacaaa----atgcagaggggtgattctaggt-aaaaaatgacctaaaaccatccatccttgatgattga 36204640  T
Q  200 aagaggaagaaaacttagagagaa 223  Q
    ||||| |||||||| |||||||||    
T  36204641 aagagaaagaaaacctagagagaa 36204664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 189 - 250
Target Start/End: Original strand, 1621735 - 1621796
Alignment:
Q  189 tcgatgagtgaaagaggaagaaaacttagagagaaaacaaagtttctctcactgaaaaatta 250  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||    
T  1621735 tcgatgagtgaaagaggaagaaaacttagagagaagacagagtttctctcactaaaaaatta 1621796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 223
Target Start/End: Complemental strand, 2520813 - 2520602
Alignment:
Q  10 aacgccgcacaagacaacgaacaacaca--atgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaa-cttgatgtatgtgaaaatcact 106  Q
    ||||||||||||||| ||||||||||||  |   |||||| ||||||||||||||| |||  ||||| ||||||||| ||||||  ||||||||| ||||    
T  2520813 aacgccgcacaagacgacgaacaacacacaacaccgcacttagacgacgaaatcacaaaa--aacacaaaagaaaaaacttgatagatgtgaaaaccact 2520716  T
Q  107 tatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagagga 206  Q
    |||||| |||||| |||| ||| |        |||  |||||||||||||||||||||||| |||||||||| || ||||  |||||||  ||| ||| |    
T  2520715 tatttagattgaacgaaaagggga---aaaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaa 2520619  T
Q  207 agaaaacttagagagaa 223  Q
    |||||  ||||||||||    
T  2520618 agaaagtttagagagaa 2520602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 52944351 - 52944226
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaa-acttgatgtatgtgaa 99  Q
    |||| |||||||||||||||| || ||||||||||||| | |||||| |||| |||||||||||||| || ||| |||||||| ||    | ||||||||    
T  52944351 aaattaaacaacgccgcacaaaacgacgaacaacacaacgccgcactcagactacgaaatcacgaaa-aagcacaaaagaaaacac----tatatgtgaa 52944257  T
Q  100 aatcacttatttaaattgaaagaaatgggaa 130  Q
    ||||||||||||| ||||||||||| |||||    
T  52944256 aatcacttatttagattgaaagaaaagggaa 52944226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 21686317 - 21686429
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||| ||||||||||||  | |||||| ||||||||||||||| |||  ||||| |||| |||||||||||  ||||||||| ||||||    
T  21686317 aacgccgcacaagacgacgaacaacacac-gccgcacttagacgacgaaatcacaaaa--aacacaaaaggaaaaacttgatagatgtgaaaaccactta 21686413  T
Q  109 tttaaattgaaagaaa 124  Q
    |||| |||||||||||    
T  21686414 tttagattgaaagaaa 21686429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 22038871 - 22039099
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaa-cttgatgtatgtgaa 99  Q
    ||||||||||||||| ||||| |  |||||||||||||     |||| | ||||| ||||||||||  |||||| ||||||||| ||||||  |||||||    
T  22038871 aaatcaaacaacgccacacaaaaggacgaacaacacaa-----cactca-acgacaaaatcacgaataaaacacaaaagaaaaaacttgatagatgtgaa 22038964  T
Q  100 aatcacttatttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtga 199  Q
    ||||||||||||| || |||||||| || ||        ||| || |||| ||||||||| || ||||||||||||||| || ||||  |||||||||||    
T  22038965 aatcacttatttagatagaaagaaagggaaa-----aaagatgcaaaggg-tgattctagatccaaaattgacctaaaaccacccctgctcgatgagtga 22039058  T
Q  200 aagaggaagaaaacttagagagaaaacaaagtttctctcac 240  Q
    ||||| |||||||||| || | ||   ||||||||||||||    
T  22039059 aagagaaagaaaactttgaaaaaagttaaagtttctctcac 22039099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 72 - 130
Target Start/End: Original strand, 1621634 - 1621692
Alignment:
Q  72 cacgaaagaaaaacttgatgtatgtgaaaatcacttatttaaattgaaagaaatgggaa 130  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||    
T  1621634 cacgaaagaaaaacttgatgtatgtgaaaatcacttatttagattgaatgaaaggggaa 1621692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 54021894 - 54021782
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||| || |||||||||||| |||| | |||| |||||||||| |||   |||| |||| ||||||| ||| |||||||||| ||||||    
T  54021894 aacgccgcacaagacgactaacaacacaatgccgcaattagacaacgaaatcacaaaa---acacaaaaggaaaaactggatatatgtgaaaaccactta 54021798  T
Q  109 tttaaattgaaagaaa 124  Q
    |||| |||||||||||    
T  54021797 tttagattgaaagaaa 54021782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 223
Target Start/End: Original strand, 19853597 - 19853795
Alignment:
Q  20 aagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcacttatttaaattga 118  Q
    ||||| ||||||||||||| | |||||| |||||||||||||||  || |||||  |||| |||||||||||  ||||||||| |||||||||| ||||     
T  19853597 aagacgacgaacaacacaacgccgcacttagacgacgaaatcac--aaaaaacaaaaaagaaaaaacttgatagatgtgaaaaccacttatttagattgg 19853694  T
Q  119 aagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaagaaaacttaga 218  Q
    |||||| ||| |        |||  |||||||||||||||||||||||| |||||||||| || ||||  ||||||| |||| | | ||||||  |||||    
T  19853695 aagaaaagggga---aaaaagatgtagaggggtgattctaggtcaaaaa-tgacctaaaaccacccctcctcgatgaatgaaggggaaagaaagtttaga 19853790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 195
Target Start/End: Complemental strand, 43510231 - 43510052
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||| || || ||||||| | |||||| |||||||||||||||     ||| |||||| ||||||||||||  ||||||||  ||||||    
T  43510231 aacgccgcacaagacgacaaataacacaacgccgcacttagacgacgaaatcac----aaaaaacgaaaggaaaaacttgataaatgtgaaagccactta 43510136  T
Q  109 tttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatga 195  Q
    |||| ||||||||||| |||||        |||  ||||| |||||||||||||||||| |||||||||| || || | ||||||||    
T  43510135 tttagattgaaagaaaagggaa---aaaaagatgtagaggagtgattctaggtcaaaaaatgacctaaaaccacccttcttcgatga 43510052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 4959529 - 4959596
Alignment:
Q  5 caaacaacgccgcacaaga-caacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    ||||||||| ||||||| | |||||||||| ||||||||| |||||||||||||||||||||||||||    
T  4959529 caaacaacgtcgcacaaaaacaacgaacaaaacaatgtcgtactaagacgacgaaatcacgaaagaaa 4959596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 10 - 130
Target Start/End: Complemental strand, 33921085 - 33920968
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaa-cttgatgtatgtgaaaatcactta 108  Q
    |||| |||| |||||  |||||||||||| | |||||| ||||||||||||||| |||  | ||| ||||||||| |||||| |||||||||||||||||    
T  33921085 aacgtcgcataagacggcgaacaacacaacgccgcacttagacgacgaaatcacaaaa--agcacaaaagaaaaaacttgatatatgtgaaaatcactta 33920988  T
Q  109 tttaaattgaaagaaatgggaa 130  Q
    |||  ||||||||||| |||||    
T  33920987 ttt--attgaaagaaaagggaa 33920968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 10 - 123
Target Start/End: Original strand, 56040721 - 56040831
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaaatcacttat 109  Q
    ||||||||||||||| |||||||||| || | |||||| | |||||||||||||   | |||||| | | |||||||||||  ||||||||| |||||||    
T  56040721 aacgccgcacaagacgacgaacaacaaaacgccgcacttaaacgacgaaatcac---aaaaacacaagaaaaaaacttgatagatgtgaaaaccacttat 56040817  T
Q  110 ttaaattgaaagaa 123  Q
    ||| ||||||||||    
T  56040818 ttagattgaaagaa 56040831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 124
Target Start/End: Original strand, 24099144 - 24099258
Alignment:
Q  12 cgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatca-cgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcacttat 109  Q
    ||||||||||||| |||||||||| |||| |||||| ||||||||||||||   ||| ||| || ||| | | ||||||||  |||||||||||||||||    
T  24099144 cgccgcacaagacgacgaacaacaaaatgccgcacttagacgacgaaatcatacaaaaaaatacaaaatggacaacttgatagatgtgaaaatcacttat 24099243  T
Q  110 ttaaattgaaagaaa 124  Q
    ||| |||||||||||    
T  24099244 ttagattgaaagaaa 24099258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 44596698 - 44596585
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaaatcacttat 109  Q
    ||||||||||||||| |||||||| |||| ||| |||| |||||| |||||||| ||| | |||  ||  ||||||||| | ||||||||||||  ||||    
T  44596698 aacgccgcacaagacgacgaacaatacaacgtcacacttagacgaggaaatcacaaaatacaca-aaacaaaaaacttgttatatgtgaaaatcggttat 44596600  T
Q  110 ttaaattgaaagaaa 124  Q
    |||||||||||||||    
T  44596599 ttaaattgaaagaaa 44596585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 28 - 120
Target Start/End: Complemental strand, 52978839 - 52978749
Alignment:
Q  28 gaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaaatcacttatttaaattgaaa 120  Q
    ||||||||||| | |||||| ||||| ||||||||| |||  ||| | || |||||||||||| ||||||||||||||||||||| |||||||    
T  52978839 gaacaacacaacgccgcacttagacgccgaaatcacaaaa--aacccaaaggaaaaacttgatatatgtgaaaatcacttatttagattgaaa 52978749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 9713952 - 9713822
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa--gaaaaacttgatgtatgtga 98  Q
    ||||||||||||| |||||| |||  ||||||||||||   |  ||| |||||||||||| | |||| |||||| |||   ||||||||||| ||||||     
T  9713952 aaatcaaacaacgtcgcacatgacggcgaacaacacaaaaccttactcagacgacgaaataaagaaa-aaacacaaaaagaaaaaacttgatatatgtgg 9713854  T
Q  99 aaatcacttatttaaattgaaagaaatgggaa 130  Q
    |||||||||||||| ||||||||||| |||||    
T  9713853 aaatcacttatttagattgaaagaaaggggaa 9713822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 120
Target Start/End: Original strand, 17949399 - 17949508
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcactta 108  Q
    |||||||||||| || || |||||||||| | |||||| |||||||||||||||  || |||||| ||| |||||||||||| | |||||||| ||||||    
T  17949399 aacgccgcacaacacgacaaacaacacaacgccgcacttagacgacgaaatcac--aaaaaacacaaaaggaaaaacttgatatgtgtgaaaaccactta 17949496  T
Q  109 tttaaattgaaa 120  Q
    |||  |||||||    
T  17949497 tttctattgaaa 17949508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 120
Target Start/End: Original strand, 17953251 - 17953360
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcactta 108  Q
    |||||||||||| || || |||||||||| | |||||| |||||||||||||||  || |||||| ||| |||||||||||| | |||||||| ||||||    
T  17953251 aacgccgcacaacacgacaaacaacacaacgccgcacttagacgacgaaatcac--aaaaaacacaaaaggaaaaacttgatatgtgtgaaaaccactta 17953348  T
Q  109 tttaaattgaaa 120  Q
    |||  |||||||    
T  17953349 tttctattgaaa 17953360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 33332640 - 33332722
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaa 84  Q
    ||||||||||||| |||||||| | || |||||||||| | |||||  ||||||||||||||||||| |||||| |||||||||    
T  33332640 aaatcaaacaacgtcgcacaaggcgacaaacaacacaacgccgcacacagacgacgaaatcacgaaa-aaacacaaaagaaaaa 33332722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 37030287 - 37030184
Alignment:
Q  18 acaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaaatcacttatttaaattg 117  Q
    ||||||| ||||||||||||| | || ||| ||| ||||||||||| ||| | ||||  || ||||||||||| | ||||||||||| ||||||||||||    
T  37030287 acaagacgacgaacaacacaacgccgtactcagatgacgaaatcacaaaa-agacac--aataaaaacttgatatgtgtgaaaatcatttatttaaattg 37030191  T
Q  118 aaagaaa 124  Q
    |||||||    
T  37030190 aaagaaa 37030184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 53444148 - 53444049
Alignment:
Q  14 ccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaaatcacttatttaa 113  Q
    ||||||||||| ||||||||||||| |||| ||| ||||||||||||||| ||| |||||      ||||||||||| | |||| ||| |||||||||||    
T  53444148 ccgcacaagacgacgaacaacacaacgtcgtacttagacgacgaaatcacaaaaaaaaca------aaaaacttgatatgtgtg-aaaccacttatttaa 53444056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 44 - 124
Target Start/End: Complemental strand, 47158227 - 47158148
Alignment:
Q  44 cactaagacgacgaaatcacgaaagaaacacgaaagaaaaa-cttgatgtatgtgaaaatcacttatttaaattgaaagaaa 124  Q
    |||| ||| ||||||||||| |||  ||||| ||||||||| |||||| |||||| ||||||||||||||||||||||||||    
T  47158227 cacttagatgacgaaatcacaaaa--aacacaaaagaaaaaacttgatatatgtggaaatcacttatttaaattgaaagaaa 47158148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 1657544 - 1657589
Alignment:
Q  26 acgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||    
T  1657544 acgaacaaaacaatgtcgcactaagacgacgaaatcacaaaagaaa 1657589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 29961002 - 29961109
Alignment:
Q  13 gccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcacttattt 111  Q
    |||||||||||| |||||||||||||   | |||| |||||| ||||| |  ||| |||||| |||| |||||||||||  |||||||||||||||||||    
T  29961002 gccgcacaagacgacgaacaacacaaccccacacttagacgatgaaataaaaaaa-aaacacaaaaggaaaaacttgatagatgtgaaaatcacttattt 29961100  T
Q  112 aaattgaaa 120  Q
    | |||||||    
T  29961101 agattgaaa 29961109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 40066130 - 40066243
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||| ||| ||||| ||||||||||||| | |||||| |||||| ||||||||  |  |||||| ||| ||||||||| |  |||||||||| ||||||    
T  40066130 aacgctgcataagacgacgaacaacacaacgccgcacttagacgatgaaatcac--ataaaacacaaaaggaaaaacttaaaatatgtgaaaaccactta 40066227  T
Q  109 tttaaattgaaagaaa 124  Q
    |||| |||||||||||    
T  40066228 tttatattgaaagaaa 40066243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 40859788 - 40859740
Alignment:
Q  20 aagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaag 68  Q
    |||||||||||||| |||| |||||||||||||| ||||||||||||||    
T  40859788 aagacaacgaacaaaacaacgtcgcactaagacggcgaaatcacgaaag 40859740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 43853482 - 43853434
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaa 49  Q
    |||||||||||||||||||||||  | ||||||||||||||||||||||    
T  43853482 aaatcaaacaacgccgcacaagatgatgaacaacacaatgtcgcactaa 43853434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 143 - 223
Target Start/End: Complemental strand, 51535161 - 51535082
Alignment:
Q  143 cagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaagaaaacttagagagaa 223  Q
    ||||| ||||||||||||||||||||| |  ||||| ||||||| || ||||| |||||||| |||| |||||||||||||    
T  51535161 cagagaggtgattctaggtcaaaaatt-atttaaaaccatccctctttgatgattgaaagagaaagagaacttagagagaa 51535082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 15729937 - 15729996
Alignment:
Q  5 caaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcac 63  Q
    ||||||||| ||||||| ||| |||||||| |||| ||||||||||||||||||||||||    
T  15729937 caaacaacgtcgcacaaagacgacgaacaaaacaaggtcgcactaagacgacgaaatcac 15729996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 246
Target Start/End: Original strand, 22063984 - 22064087
Alignment:
Q  143 cagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaagaaaacttagagagaaaacaaagtttctctcactg 242  Q
    ||||||||||||||||||||||||| ||||||||||| |  | |  | ||||||||||| || |||  |||||||||||||    ||||||||||||||     
T  22063984 cagaggggtgattctaggtcaaaaaatgacctaaaattagtcatccttgatgagtgaaatagaaagcgaacttagagagaaggtgaagtttctctcacta 22064083  T
Q  243 aaaa 246  Q
    ||||    
T  22064084 aaaa 22064087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 22558546 - 22558652
Alignment:
Q  16 gcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaa-acttgatgtatgtgaaaatcacttatttaaa 114  Q
    ||||||||| | |||||||| |||| |||||| ||||||  ||||||| |||   |||| |||||||| |||||||  ||||||||| |||||||||| |    
T  22558546 gcacaagacgatgaacaacaaaatgccgcacttagacgataaaatcacaaaa---acacaaaagaaaaaacttgatagatgtgaaaaccacttatttaga 22558642  T
Q  115 ttgaaagaaa 124  Q
    ||||||||||    
T  22558643 ttgaaagaaa 22558652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 36804529 - 36804580
Alignment:
Q  20 aagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    |||||||| ||||| |||||| |||||||||||||||||||||| |||||||    
T  36804529 aagacaacaaacaaaacaatgccgcactaagacgacgaaatcacaaaagaaa 36804580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 38434741 - 38434690
Alignment:
Q  20 aagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    ||||| |||||||| |||| |||||||||||||||||||||||| |||||||    
T  38434741 aagacgacgaacaaaacaacgtcgcactaagacgacgaaatcacaaaagaaa 38434690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 309
Target Start/End: Complemental strand, 15031893 - 15031851
Alignment:
Q  267 aagtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    |||||||||||| |||||||||| |||||||||||||||||||    
T  15031893 aagtttcgtcaattatcccctgaaattaacaaaacttcaatta 15031851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 30416578 - 30416644
Alignment:
Q  6 aaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    |||||||| ||||||| ||| |||||||| |||| |||||||||||||  |||||||||||||||||    
T  30416578 aaacaacgtcgcacaaagacgacgaacaaaacaacgtcgcactaagacagcgaaatcacgaaagaaa 30416644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 309
Target Start/End: Original strand, 38575573 - 38575615
Alignment:
Q  267 aagtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    |||||||||||| ||||| ||||||||||||||||||||||||    
T  38575573 aagtttcgtcaattatcctctgacattaacaaaacttcaatta 38575615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 46775813 - 46775879
Alignment:
Q  5 caaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    ||||||||||||||||| || |||||  | |||| ||| |||||||||||||||||||| |||||||    
T  46775813 caaacaacgccgcacaaaacgacgaattaaacaacgtcacactaagacgacgaaatcacaaaagaaa 46775879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 309
Target Start/End: Original strand, 55082465 - 55082507
Alignment:
Q  267 aagtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    |||||||||||| |||||||||| |||||||||||||||||||    
T  55082465 aagtttcgtcaattatcccctgaaattaacaaaacttcaatta 55082507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 6155295 - 6155423
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag--aaaaacttgatgtatgtga 98  Q
    ||||||||||||| |||||||||  |||| ||||||||   |||||| ||||||||||||||||||  |||||| ||||  ||||| ||||  | ||| |    
T  6155295 aaatcaaacaacgacgcacaagatgacga-caacacaacaccgcactcagacgacgaaatcacgaa--aaacacaaaagtaaaaaatttgaaatttgtaa 6155391  T
Q  99 aaatcacttatttaaattgaaagaaatgggaa 130  Q
    |||||| |||||||||| |||| ||| |||||    
T  6155392 aaatcatttatttaaatcgaaaaaaaggggaa 6155423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 247
Target Start/End: Complemental strand, 9713775 - 9713702
Alignment:
Q  174 taaaatcatccctattcgatgagtgaaagaggaagaaaacttagagagaaaacaaagtttctctcactgaaaaa 247  Q
    |||||||| ||||  |||||||||||||||| |||| |||||||||||||   | ||||||||||||| |||||    
T  9713775 taaaatcacccctcctcgatgagtgaaagagaaagagaacttagagagaaggtagagtttctctcactaaaaaa 9713702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 35395741 - 35395798
Alignment:
Q  3 atcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaat 60  Q
    ||||||||||| || ||||||| ||||||||||||| | |||||| ||||||||||||    
T  35395741 atcaaacaacgtcgaacaagacgacgaacaacacaacgccgcactcagacgacgaaat 35395798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 127
Target Start/End: Original strand, 38166313 - 38166424
Alignment:
Q  20 aagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaaca---cgaaaga-aaaacttgatgtatgtgaaaatcacttatttaaat 115  Q
    ||||||||||||||||||| | |||||| ||||||||||||||| ||| ||| |   |  |||| || ||||||| |||||||||||||||| |||| ||    
T  38166313 aagacaacgaacaacacaacgccgcactcagacgacgaaatcacaaaaaaaaaaaaccagaagacaacacttgatatatgtgaaaatcacttgtttagat 38166412  T
Q  116 tgaaagaaatgg 127  Q
     ||||| |||||    
T  38166413 cgaaaggaatgg 38166424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 43353595 - 43353660
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaa 66  Q
    ||||||||||||| | |||||||| |||||||||| || | |||||  ||||||||||||||||||    
T  43353595 aaatcaaacaacgacacacaagacgacgaacaacataaagccgcaccgagacgacgaaatcacgaa 43353660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 240
Target Start/End: Complemental strand, 9178257 - 9178165
Alignment:
Q  148 gggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaagaaaacttagagagaaaacaaagtttctctcac 240  Q
    |||||||||||||||||||| |||||||| | || ||||  | ||||| |||| ||| ||||||  |||||||||||   |||||||||||||    
T  9178257 gggtgattctaggtcaaaaaatgacctaagaccacccctccttgatgaatgaaggagaaagaaattttagagagaaactgaagtttctctcac 9178165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 9645586 - 9645622
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacaca 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  9645586 aaatcaaacaacgccgcacaagacgacgaacaacaca 9645622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 18138950 - 18138986
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacaca 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  18138950 aaatcaaacaacgccgcacaagacgacgaacaacaca 18138986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 29120446 - 29120557
Alignment:
Q  18 acaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaaatcacttatttaaattg 117  Q
    ||||||| | ||||||||||  | |||||| ||||||||||||||| ||| | |||  |||||||||   ||| |||||||||| |||||||||| ||||    
T  29120446 acaagacgatgaacaacacagcgccgcacttagacgacgaaatcacaaaaaacaca-aaaagaaaaatcggatatatgtgaaaaccacttatttagattg 29120544  T
Q  118 aaagaaatgggaa 130  Q
    ||| ||| |||||    
T  29120545 aaataaaggggaa 29120557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 43095654 - 43095551
Alignment:
Q  18 acaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaaatcacttatttaaattg 117  Q
    ||||||| || ||||||||||||| ||| | |||| ||| |||||| ||||   ||| | | ||||||| ||| |||||||||| |||||||||| ||||    
T  43095654 acaagacgactaacaacacaatgttgcaattagactacggaatcacaaaag---cacaacaaaaaaactcgatatatgtgaaaaccacttatttagattg 43095558  T
Q  118 aaagaaa 124  Q
    |||||||    
T  43095557 aaagaaa 43095551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 49072808 - 49072852
Alignment:
Q  15 cgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaa 59  Q
    |||||||||| ||||||||||||| |||||||| |||||||||||    
T  49072808 cgcacaagacgacgaacaacacaacgtcgcactcagacgacgaaa 49072852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 49126163 - 49126199
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacaca 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  49126163 aaatcaaacaacgccgcacaagacgacgaacaacaca 49126199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 51646236 - 51646184
Alignment:
Q  20 aagacaacgaacaacacaa-tgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    ||||| |||||||| |||| ||||||| |||||||||||||||||||||||||    
T  51646236 aagacgacgaacaaaacaaatgtcgcattaagacgacgaaatcacgaaagaaa 51646184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 56156717 - 56156781
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacac 74  Q
    |||||| |||||||| ||||||||||||| | | |||| ||||||||||||||| ||| ||||||    
T  56156717 aacgccacacaagacgacgaacaacacaacgccacacttagacgacgaaatcacaaaaaaaacac 56156781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 5388673 - 5388606
Alignment:
Q  5 caaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    |||||||| |||||||| ||| || | ||| |||||||| ||||||||||||||| ||||||||||||    
T  5388673 caaacaacaccgcacaaagacgacaaccaaaacaatgtcacactaagacgacgaactcacgaaagaaa 5388606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 25273935 - 25273822
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaacttgatgtatgtgaaa 100  Q
    |||||||||||||||||||||||| |||||||||| |    | |||| ||| || |||||||| ||||||     ||| |||| || ||| |||||||||    
T  25273935 aaatcaaacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcac-aaagaa-----aaaaaaaacctagatctatgtgaaa 25273842  T
Q  101 atcacttatttaaattgaaa 120  Q
    |||||||||||| |||||||    
T  25273841 atcacttatttagattgaaa 25273822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 29589333 - 29589384
Alignment:
Q  20 aagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    |||||||| ||||| |||| ||||||||||||||||||||| || |||||||    
T  29589333 aagacaacaaacaaaacaacgtcgcactaagacgacgaaataacaaaagaaa 29589384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 148 - 195
Target Start/End: Original strand, 29961138 - 29961185
Alignment:
Q  148 gggtgattctaggtcaaaaattgacctaaaatcatccctattcgatga 195  Q
    ||||||||||| |||||||| | |||||||||||||||| ||||||||    
T  29961138 gggtgattctatgtcaaaaaataacctaaaatcatccctcttcgatga 29961185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 46728892 - 46728935
Alignment:
Q  20 aagacaacgaacaacacaatgtcgcactaagacgacgaaatcac 63  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||    
T  46728892 aagacgacgaacaaaacaaggtcgcactaagacgacgaaatcac 46728935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 868214 - 868180
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  868214 aaatcaaacaacgccgcacaagacgacgaacaaca 868180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 4643910 - 4643876
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  4643910 aaatcaaacaacgccgcacaagacgacgaacaaca 4643876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 309
Target Start/End: Original strand, 6335023 - 6335065
Alignment:
Q  267 aagtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    |||||||||||| | |||||||| |||||||||||||||||||    
T  6335023 aagtttcgtcaattttcccctgaaattaacaaaacttcaatta 6335065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 309
Target Start/End: Original strand, 6335973 - 6336015
Alignment:
Q  267 aagtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    |||||||||||| | |||||||| |||||||||||||||||||    
T  6335973 aagtttcgtcaattttcccctgaaattaacaaaacttcaatta 6336015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 309
Target Start/End: Original strand, 6644050 - 6644092
Alignment:
Q  267 aagtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    |||||||||||| || ||||||| |||||||||||||||||||    
T  6644050 aagtttcgtcaattaccccctgaaattaacaaaacttcaatta 6644092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 8009398 - 8009432
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  8009398 aaatcaaacaacgccgcacaagacgacgaacaaca 8009432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 9528914 - 9528948
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  9528914 aaatcaaacaacgccgcacaagacgacgaacaaca 9528948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 10389791 - 10389825
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  10389791 aaatcaaacaacgccgcacaagacgacgaacaaca 10389825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 178
Target Start/End: Complemental strand, 10496242 - 10496212
Alignment:
Q  148 gggtgattctaggtcaaaaattgacctaaaa 178  Q
    |||||||||||||||||||||||||||||||    
T  10496242 gggtgattctaggtcaaaaattgacctaaaa 10496212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 71
Target Start/End: Complemental strand, 23926174 - 23926132
Alignment:
Q  29 aacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    ||||| |||| | ||||||||||||||||||||||||||||||    
T  23926174 aacaaaacaacgccgcactaagacgacgaaatcacgaaagaaa 23926132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 309
Target Start/End: Complemental strand, 24318732 - 24318690
Alignment:
Q  267 aagtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    |||||||||||| |||||||||| |||| ||||||||||||||    
T  24318732 aagtttcgtcaattatcccctgaaattatcaaaacttcaatta 24318690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 29965687 - 29965653
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  29965687 aaatcaaacaacgccgcacaagacgacgaacaaca 29965653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 309
Target Start/End: Original strand, 31559064 - 31559106
Alignment:
Q  267 aagtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    |||||||||||| |||||||||  |||||||||||||||||||    
T  31559064 aagtttcgtcaattatcccctggaattaacaaaacttcaatta 31559106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 309
Target Start/End: Original strand, 43419613 - 43419655
Alignment:
Q  267 aagtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    |||||||||||| ||||||||||| |||||||| |||||||||    
T  43419613 aagtttcgtcaattatcccctgacgttaacaaatcttcaatta 43419655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 43444445 - 43444411
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  43444445 aaatcaaacaacgccgcacaagacgacgaacaaca 43444411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 47417714 - 47417680
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  47417714 aaatcaaacaacgccgcacaagacgacgaacaaca 47417680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 52934013 - 52934079
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaa 67  Q
    |||||||||||||| |||||| |  ||||||||||||| | |||||| |||||| ||||| ||||||    
T  52934013 aaatcaaacaacgctgcacaaaatgacgaacaacacaacgccgcactcagacgatgaaataacgaaa 52934079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 309
Target Start/End: Complemental strand, 53140032 - 53139990
Alignment:
Q  267 aagtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    |||||||||||| || ||||||| |||||||||||||||||||    
T  53140032 aagtttcgtcaattaccccctgaaattaacaaaacttcaatta 53139990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 53616687 - 53616721
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  53616687 aaatcaaacaacgccgcacaagacgacgaacaaca 53616721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 9145955 - 9145992
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaa 38  Q
    ||||||||||| |||||||||||| |||||||||||||    
T  9145955 aaatcaaacaatgccgcacaagacgacgaacaacacaa 9145992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 14121900 - 14121787
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacg-aaagaaaca-cgaaagaaaaacttgatgtatgtga 98  Q
    ||||||||||||| |  ||||||| |||||||  |||||| |||  | |||||||||||||| | ||| |||||  |||  ||||||||| | |||||||    
T  14121900 aaatcaaacaacgtcatacaagactacgaacattacaatgccgccgtcagacgacgaaatcaagaaaaaaaacatagaagaaaaaacttgttatatgtga 14121801  T
Q  99 aaatcacttattta 112  Q
    ||||||||||||||    
T  14121800 aaatcacttattta 14121787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 26091057 - 26091098
Alignment:
Q  79 gaaaaacttgatgtatgtgaaaatcacttatttaaattgaaa 120  Q
    |||||||||||| |||||||||| |||||||||| |||||||    
T  26091057 gaaaaacttgatttatgtgaaaaccacttatttagattgaaa 26091098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 26091118 - 26091155
Alignment:
Q  144 agaggggtgattctaggtcaaaaattgacctaaaatca 181  Q
    |||||||||||||||||||||||| | |||||||||||    
T  26091118 agaggggtgattctaggtcaaaaaataacctaaaatca 26091155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 28588698 - 28588653
Alignment:
Q  26 acgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    |||||||| |||| ||||||||||||| | ||||||||||||||||    
T  28588698 acgaacaaaacaacgtcgcactaagacaaagaaatcacgaaagaaa 28588653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 120
Target Start/End: Original strand, 31381777 - 31381818
Alignment:
Q  80 aaaaactt-gatgtatgtgaaaatcacttatttaaattgaaa 120  Q
    |||||||| ||| |||||||||||||||||||||||||||||    
T  31381777 aaaaacttagatctatgtgaaaatcacttatttaaattgaaa 31381818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 38546030 - 38546079
Alignment:
Q  20 aagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaaga 69  Q
    ||||| ||||||||||||| |||||| ||||||||| |||||| ||||||    
T  38546030 aagacgacgaacaacacaacgtcgcattaagacgacaaaatcaagaaaga 38546079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #104
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 124
Target Start/End: Complemental strand, 45418521 - 45418447
Alignment:
Q  49 agacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcacttatttaaattgaaagaaa 124  Q
    ||||||||||||||| |||  ||||| |||| ||||||||||| |||||||||| | |||||||| ||||| |||||    
T  45418521 agacgacgaaatcacaaaa--aacacaaaaggaaaaacttgatatatgtgaaaacctcttatttatattgagagaaa 45418447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #105
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 1566009 - 1565969
Alignment:
Q  269 gtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    ||||| |||| |||||||||| |||||||||||||||||||    
T  1566009 gtttcatcaattatcccctgaaattaacaaaacttcaatta 1565969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #106
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 2624548 - 2624512
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacaca 37  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  2624548 aaatcaaactacgccgcacaagacgacgaacaacaca 2624512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #107
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 120
Target Start/End: Original strand, 8009466 - 8009506
Alignment:
Q  80 aaaaacttgatgtatgtgaaaatcacttatttaaattgaaa 120  Q
    ||||||| ||| ||||||||||||||||||||| |||||||    
T  8009466 aaaaactagatctatgtgaaaatcacttatttagattgaaa 8009506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #108
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 120
Target Start/End: Complemental strand, 8670439 - 8670399
Alignment:
Q  80 aaaaacttgatgtatgtgaaaatcacttatttaaattgaaa 120  Q
    ||||||||||| |||||||||| ||||||||||| ||||||    
T  8670439 aaaaacttgatatatgtgaaaaccacttatttaatttgaaa 8670399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #109
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 130
Target Start/End: Original strand, 12199786 - 12199887
Alignment:
Q  28 gaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaaga-aaaacttgatgtatgtgaaaatcacttatttaaattgaaagaaatg 126  Q
    ||||||||||| | | |||| ||||||||||||||| |||  ||||| ||| | |||||||| | | |||||||| ||| ||| |||||||||||||| |    
T  12199786 gaacaacacaacgccacactcagacgacgaaatcacaaaa--aacacaaaatagaaaacttgctatgtgtgaaaaccacatatgtaaattgaaagaaagg 12199883  T
Q  127 ggaa 130  Q
    ||||    
T  12199884 ggaa 12199887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #110
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 32189138 - 32189070
Alignment:
Q  5 caaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaac 72  Q
    ||||||||| ||||||| ||| ||||||||  ||| ||||||| |||||||||||||||| ||| ||||    
T  32189138 caaacaacgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgacgaaatcacaaaaaaaac 32189070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #111
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 120
Target Start/End: Original strand, 37188699 - 37188739
Alignment:
Q  80 aaaaacttgatgtatgtgaaaatcacttatttaaattgaaa 120  Q
    ||||||| ||| ||||||||||||||||||||| |||||||    
T  37188699 aaaaactagatatatgtgaaaatcacttatttagattgaaa 37188739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #112
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 39633658 - 39633618
Alignment:
Q  269 gtttcgtcaactatcccctgacattaacaaaacttcaatta 309  Q
    |||||||||| |||||| ||| |||||||||||||||||||    
T  39633658 gtttcgtcaattatcccatgaaattaacaaaacttcaatta 39633618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #113
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 223
Target Start/End: Original strand, 42032732 - 42032811
Alignment:
Q  144 agaggggtgattctaggtcaaaaat-tgacctaaaatcatccctattcgatgagtgaaagaggaagaaaacttagagagaa 223  Q
    |||| ||||||||||| |||||||  | |||||||| ||  ||| |||||||||||||| || ||||||||||||||||||    
T  42032732 agagaggtgattctagatcaaaaaaataacctaaaaccactcctcttcgatgagtgaaa-agaaagaaaacttagagagaa 42032811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 10 - 223
Target Start/End: Complemental strand, 7730 - 7522
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcactta 108  Q
    |||||| |||||||| || |||||||||| | |||||| ||| ||| || |||| ||| |||||| |||| ||||||||||| |||||||||| ||||||    
T  7730 aacgccacacaagacgacaaacaacacaacgccgcactcagatgacaaattcacaaaa-aaacacaaaaggaaaaacttgatatatgtgaaaaccactta 7632  T
Q  109 tttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaag 208  Q
    |||||||||||||||| ||| |        ||| |||| | |||||||||||||||||| |||||||||| |||||||  ||||||| | || ||| |||    
T  7631 tttaaattgaaagaaaggggta-----aaagatgcagatgagtgattctaggtcaaaaaatgacctaaaaccatccctcctcgatgaataaaggagaaag 7537  T
Q  209 aaaacttagagagaa 223  Q
    |||||||||||||||    
T  7536 aaaacttagagagaa 7522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 26 - 223
Target Start/End: Original strand, 58170 - 58363
Alignment:
Q  26 acgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaa-acttgatgtatgtgaaaatcacttatttaaattgaaagaaa 124  Q
    ||||||||||||| | |||||| |||||| |||||||||||| || ||| |||||||| ||||||| |||||| |||||||||||||| |||||||||||    
T  58170 acgaacaacacaacgccgcactcagacgatgaaatcacgaaa-aagcacaaaagaaaacacttgatatatgtggaaatcacttatttagattgaaagaaa 58268  T
Q  125 tgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaagaaaacttagagagaa 223  Q
     || ||        ||| ||||||||||||| ||||||||||| |||||||||| || ||||  |||| ||||||||||  | ||||||||||||||||    
T  58269 aggaaa----aaaggatgcagaggggtgattttaggtcaaaaaatgacctaaaaccacccctcctcgacgagtgaaagaaaacgaaaacttagagagaa 58363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 10 - 223
Target Start/End: Complemental strand, 1358 - 1149
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaaga-aaaacttgatgtatgtgaaaatcactta 108  Q
    |||||| |||||||| ||||||||||||| | |||||| |||||| |||||||| ||| |||||| ||||| |||||||||| |||||||||| ||||||    
T  1358 aacgccacacaagacgacgaacaacacaacgccgcacttagacgaagaaatcac-aaaaaaacacaaaagagaaaacttgatatatgtgaaaaccactta 1260  T
Q  109 tttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaag 208  Q
    |||| | ||||||||| |||||        ||   |||||||||||||||||||||||| |||||||||| || | ||  |||||||  ||| ||| |||    
T  1259 tttagagtgaaagaaaagggaa----aaaagaagtagaggggtgattctaggtcaaaaaatgacctaaaaccacctctcctcgatgaacgaaggagaaag 1164  T
Q  209 aaaacttagagagaa 223  Q
    |||| ||||||||||    
T  1163 aaaatttagagagaa 1149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 10 - 178
Target Start/End: Original strand, 32822 - 32987
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||| |||||||||| || | |||||| ||||||||||||||| ||| |||||| ||| ||||||||||||  ||||||||| ||||||    
T  32822 aacgccgcacaagacgacgaacaacaaaacgccgcacttagacgacgaaatcac-aaaaaaacacaaaaggaaaaacttgatagatgtgaaaaccactta 32920  T
Q  109 tttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaa 178  Q
    |||| ||||||||||| ||| |        |||  ||||||||||||||| |||||||| ||||||||||    
T  32921 tttagattgaaagaaaagggga---caaaagatgtagaggggtgattctatgtcaaaaaatgacctaaaa 32987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 3 - 124
Target Start/End: Complemental strand, 93124 - 93000
Alignment:
Q  3 atcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacga--aagaaacacgaaag-aaaaacttgatgtatgtgaa 99  Q
    ||||||||||||||||||||||||| |||||||||| |  ||||| |||||||||||||| ||  || ||| ||||||| ||||||||||| || | | |    
T  93124 atcaaacaacgccgcacaagacaacaaacaacacaacgcagcactcagacgacgaaatcatgaggaaaaaaaacgaaagaaaaaacttgatataagcgta 93025  T
Q  100 aatcacttatttaaattgaaagaaa 124  Q
    ||||||||||||| |||||||||||    
T  93024 aatcacttatttagattgaaagaaa 93000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 29 - 186
Target Start/End: Complemental strand, 50781 - 50628
Alignment:
Q  29 aacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcacttatttaaattgaaagaaatgg 127  Q
    |||||||||| | |||||| |||||||||||||||||||  ||||| |||| |||||||||||  ||||||||| |||||||||| ||||||||||| ||    
T  50781 aacaacacaacgccgcacttagacgacgaaatcacgaaa--aacacaaaaggaaaaacttgatagatgtgaaaaccacttatttagattgaaagaaaagg 50684  T
Q  128 gaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccct 186  Q
    | |        |||  |||||| ||||||||||||||||| ||||||||||||| ||||    
T  50683 gga---aaaaagatgtagagggatgattctaggtcaaaaagtgacctaaaatcacccct 50628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 10117 - 10229
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||| |||||||| |||| | |||||| |||||||||||||||   | |||||| ||| |||||||||||| |||||||||| ||||||    
T  10117 aacgccgcacaagacgacgaacaaaacaaagccgcacttagacgacgaaatcac---aaaaacacaaaaggaaaaacttgatatatgtgaaaaccactta 10213  T
Q  109 tttaaattgaaagaaa 124  Q
    |||| || ||||||||    
T  10214 tttagatggaaagaaa 10229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 29 - 130
Target Start/End: Complemental strand, 38040 - 37941
Alignment:
Q  29 aacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcacttatttaaattgaaagaaatgg 127  Q
    |||||||||||| |||||| ||| |||||||| |   || |||||| |||| ||||||||||  |||||||||| |||||||||| ||||||||||| ||    
T  38040 aacaacacaatgccgcacttagatgacgaaataa---aaaaaacacaaaaggaaaaacttgacatatgtgaaaaccacttatttagattgaaagaaaggg 37944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 241
Target Start/End: Complemental strand, 15505 - 15279
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcactta 108  Q
    ||||||||||||||| |||||||||||||   |||||| ||| |||||||||||  || |||||| ||| |||||||||||   || |||||| ||||||    
T  15505 aacgccgcacaagacgacgaacaacacaacaccgcacttagatgacgaaatcac--aaaaaacacaaaaggaaaaacttgaaagatatgaaaaccactta 15408  T
Q  109 tttaaattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaag 208  Q
    |||| ||||||||||| ||| |        |||  |||||||||||||||||||||||| |||||||||| || ||||  |||| ||  ||| ||| |||    
T  15407 tttagattgaaagaaaagggga----aaaagatgtagaggggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgaagaacgaaggagaaag 15312  T
Q  209 aaaacttagagagaaaacaaagtttctctcact 241  Q
    |||  ||||||||||    ||||||||||||||    
T  15311 aaagtttagagagaagttgaagtttctctcact 15279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 223
Target Start/End: Original strand, 71943 - 72148
Alignment:
Q  14 ccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcacttattta 112  Q
    ||||||||||||||||||||||||| | |||||| ||||||||||||||| |||  ||||| || | |||||||||||  ||||||||| |||||||||     
T  71943 ccgcacaagacaacgaacaacacaacgccgcacttagacgacgaaatcacaaaa--aacacaaatggaaaaacttgatagatgtgaaaaccacttatttg 72040  T
Q  113 aattgaaagaaatgggaagnnnnnnngatacagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaagaaaa 212  Q
     ||||||||||| |||          |||  |||  ||||||||||||||||||| |||||||||| || ||||  |||||||  ||| ||| ||||||     
T  72041 gattgaaagaaaaggg---ggaaaaagatgaagaatggtgattctaggtcaaaaaatgacctaaaaccacccctcctcgatgaacgaaggagaaagaaag 72137  T
Q  213 cttagagagaa 223  Q
     ||||||||||    
T  72138 tttagagagaa 72148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 124
Target Start/End: Complemental strand, 12900 - 12816
Alignment:
Q  39 tgtcgcactaagacgacgaaatcacgaaagaaacacgaaa-gaaaaacttgatgtatgtgaaaatcacttatttaaattgaaagaaa 124  Q
    |||| |||| ||||||| |||||||||||  ||||| ||| |||| |||||||||||||||||| |||||||||||||||| |||||    
T  12900 tgtcacacttagacgacaaaatcacgaaa--aacacaaaacgaaacacttgatgtatgtgaaaaccacttatttaaattgatagaaa 12816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 6050 - 5988
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcac 63  Q
    |||||||||||||||||||||||| ||||||||||||   | ||||| |||||||||||||||    
T  6050 aaatcaaacaacgccgcacaagacgacgaacaacacatcattgcactcagacgacgaaatcac 5988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 250
Target Start/End: Original strand, 19241 - 19346
Alignment:
Q  143 cagaggggtgattctaggtcaaaaattgacctaaaatcatccctattcgatgagtgaaagaggaagaaaacttagagagaaaacaaagtttctctcactg 242  Q
    ||||||||| |||||||||||||||  ||| ||||| || ||||  |||||||||||||||| ||||||| ||||||||||     |||||||||||||     
T  19241 cagaggggtaattctaggtcaaaaa-cgacataaaaccacccctcctcgatgagtgaaagagaaagaaaa-ttagagagaagttggagtttctctcacta 19338  T
Q  243 aaaaatta 250  Q
    ||||||||    
T  19339 aaaaatta 19346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 124
Target Start/End: Original strand, 1933 - 2006
Alignment:
Q  49 agacgacgaaatcacgaaagaaacacgaaag-aaaaacttgatgtatgtgaaaatcacttatttaaattgaaagaaa 124  Q
    ||||||||||||||| |||   |||| |||| ||||||||||| |||||| ||| ||||||||||||||||||||||    
T  1933 agacgacgaaatcacaaaa---acacaaaaggaaaaacttgatatatgtgcaaaccacttatttaaattgaaagaaa 2006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 2048 - 2159
Alignment:
Q  10 aacgccgcacaagacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaacacgaaagaaaaa-cttgatgtatgtgaaaatcactta 108  Q
    |||||| || ||||| |||||||||| |||| |||||| |||||| |||||||| |||   |||| ||||||||| ||||||  ||||||||  ||||||    
T  2048 aacgccacataagacgacgaacaacaaaatgccgcacttagacgatgaaatcacaaaa---acacaaaagaaaaaacttgatagatgtgaaac-cactta 2143  T
Q  109 tttaaattgaaagaaa 124  Q
    |||| |||||||||||    
T  2144 tttagattgaaagaaa 2159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 137014 - 137081
Alignment:
Q  5 caaacaacgccgcacaa-gacaacgaacaacacaatgtcgcactaagacgacgaaatcacgaaagaaa 71  Q
    ||||||||| ||||||| ||| | |||||| |||| |||| ||||||||||||||||||| |||||||    
T  137014 caaacaacgtcgcacaaagacgatgaacaaaacaacgtcgtactaagacgacgaaatcacaaaagaaa 137081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 361836 - 361870
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaaca 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  361836 aaatcaaacaacgccgcacaagacgacgaacaaca 361870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 78
Target Start/End: Original strand, 11771 - 11808
Alignment:
Q  41 tcgcactaagacgacgaaatcacgaaagaaacacgaaa 78  Q
    |||||||||||||| |||||||||||||||| ||||||    
T  11771 tcgcactaagacgatgaaatcacgaaagaaaaacgaaa 11808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 124
Target Start/End: Original strand, 31413 - 31458
Alignment:
Q  79 gaaaaacttgatgtatgtgaaaatcacttatttaaattgaaagaaa 124  Q
    |||||||||||| ||||||||||  ||||||||| |||||||||||    
T  31413 gaaaaacttgatatatgtgaaaactacttatttatattgaaagaaa 31458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 36724 - 36761
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacacaa 38  Q
    |||||||||||| ||||||||||| |||||||||||||    
T  36724 aaatcaaacaactccgcacaagacgacgaacaacacaa 36761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 453972 - 453936
Alignment:
Q  1 aaatcaaacaacgccgcacaagacaacgaacaacaca 37  Q
    ||||||||||||||||| |||||| ||||||||||||    
T  453972 aaatcaaacaacgccgcccaagacgacgaacaacaca 453936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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