View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16514_low_18 (Length: 281)
Name: NF16514_low_18
Description: NF16514
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16514_low_18 |
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Alignment Details
Target: chr1 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 97 - 267
Target Start/End: Complemental strand, 29550146 - 29549976
Alignment:
| Q |
97 |
aggatttgttgttatatatttgttgctaatatgtctattgattttgagtagcagacattgaaaattaagatactgaagtttttccaattgatccaccatc |
196 |
Q |
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| T |
29550146 |
aggatttgttgttatatatttgttgctaatatgtgtattggttttgagtagcagacattgaaaattaagatactgaagtttttccaattgatccaccatc |
29550047 |
T |
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| Q |
197 |
aatcatattcgttatctcaagtcgctaccnnnnnnnatgtaagaaatgtgtttcttttcttatatttcatc |
267 |
Q |
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| T |
29550046 |
aattatattcgttatctcaagtctcaacctttttttatgtaagaaatgtgtttcttttcttatatttcatc |
29549976 |
T |
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