View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16515_high_55 (Length: 303)
Name: NF16515_high_55
Description: NF16515
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16515_high_55 |
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Alignment Details
Target: chr4 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 13 - 286
Target Start/End: Complemental strand, 45317475 - 45317201
Alignment:
| Q |
13 |
cataggacttacagaatcaatcaaacaggacaataggacataagactaattataatgtgaaaattaaagagaaaaaa-cgctgccatgttccatgattca |
111 |
Q |
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| T |
45317475 |
cataggacttagagaatcaatcaaacaggacaataggacataagactaattataatgtgaaaattaaagagaaaaaaacgctgccatgttccatgattca |
45317376 |
T |
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| Q |
112 |
attccatgactaggagatcattatcaattaactttgatttgagatataaaacaaataatattatctagggtgctagaaaaagcagatccatatatcaaga |
211 |
Q |
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| T |
45317375 |
attccatgactaggagatcattatcaattaactttgatttgagatataaaacaaatattattatctagggtgctagaaaaagcagatccatacatcaata |
45317276 |
T |
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| Q |
212 |
attgattcagattaatttctgacnnnnnnnttatcataagaacaatacaacaaaattaattttatgactgaagag |
286 |
Q |
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| T |
45317275 |
attgattcagattaatttctgacaaaaaaattatcataagaacaatacaacaaaattaattttatgactgaagag |
45317201 |
T |
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