View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16515_high_59 (Length: 290)
Name: NF16515_high_59
Description: NF16515
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16515_high_59 |
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Alignment Details
Target: chr1 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 14 - 274
Target Start/End: Original strand, 48011410 - 48011673
Alignment:
| Q |
14 |
aacaattttagcaaatacaaaatcaaagtgtaaactatagagtagtacaaatatcaagcaaattacctcaaaataatta---gttgctgaaaaaccttgt |
110 |
Q |
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| T |
48011410 |
aacaattttagcaaatacaaaatcaaagtgtaaactatagagtagtacaaatatcaagcaaattacctcaaaataattattagttgctgaaaaaccttgt |
48011509 |
T |
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| Q |
111 |
gaataatctaccatatttcctacataattttgttggtttgtcccagcaacattgttctgaaaaattatgaacaaccataagtaacaaaaattgttaaaaa |
210 |
Q |
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| T |
48011510 |
gaataatctaccatatttcctacataattttgttggtttgtcccaacaacattgttctgaaaaattatgaacaaccataagtaacaaaaattgttaaaaa |
48011609 |
T |
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| Q |
211 |
tactaagaaattaatatcaaattatctaccatatttcttacagttgaaaagccaaagacatgag |
274 |
Q |
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| T |
48011610 |
tactaagaaattaatatcaaataatctaccatatttcttacagttgaaaagtcaaagacatgag |
48011673 |
T |
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