View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16515_high_66 (Length: 281)
Name: NF16515_high_66
Description: NF16515
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16515_high_66 |
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Alignment Details
Target: chr7 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 274
Target Start/End: Complemental strand, 49086041 - 49085764
Alignment:
| Q |
1 |
cagaaataatgtaagaacggacgaaatcattcctgcaaatgcaattcttccagctaaaagcaggatcttggcctcatcgttattagacataagcatacta |
100 |
Q |
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| T |
49086041 |
cagaaataatgtaagaacggacgaaatcattcctgcaaatgcaattcttccagctaaaagcaggatcttggcttcatcgttattagacataagcatgcta |
49085942 |
T |
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| Q |
101 |
gttaaaccacagccctaacaagtaagatttaca----cgaggtacaataaaaaattcaaatcaatcactacataataattacaatcctaaatttgtagga |
196 |
Q |
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||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49085941 |
gttaaaccacagccctaacaagtaagatttaaataaacgaggtacaataaaaaattcaaatcaatcactacataataattacaatcctaaatttgtagga |
49085842 |
T |
|
| Q |
197 |
gacagtcaatgagtcaatataattaacaaacaagccgacagaaagcactaaaaatgctattaaaaacaatttcatttc |
274 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
49085841 |
gacagtcaatgagtcaatgtaattaacaaacaagccgacagaaagcactaaaaatgctattaaaaacaatttgatttc |
49085764 |
T |
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