View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16515_low_43 (Length: 347)
Name: NF16515_low_43
Description: NF16515
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16515_low_43 |
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Alignment Details
Target: chr7 (Bit Score: 289; Significance: 1e-162; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 13 - 330
Target Start/End: Original strand, 7108631 - 7108944
Alignment:
| Q |
13 |
tatggttttctggaccccttgataaggtctagcttaccttcatccaccaatctagaaatacttctgctcatcacctctttggcaaaacataaaaggagag |
112 |
Q |
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| T |
7108631 |
tatggttttctggaccccttgataaggtctagcttaccttcatccaccaatctagaaatacctctgctcatcacctctttggcaaaacataaaaggagag |
7108730 |
T |
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| Q |
113 |
gagagatagatacagtattcctgcctcacccctctcttacaatgaaaataatcatgaagcttatcattgagagaaattatcagagaatatgagtttaaaa |
212 |
Q |
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||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
7108731 |
gagagat----acagtattcctgcctcacccctctcttacaatgaaaataatcatgaagcttatcattgagagaaattatcagacaatatgagtttaaaa |
7108826 |
T |
|
| Q |
213 |
tgacctctatccaattacaaatgttttcattaaaaccaaaagctttcaaaatcttcaaaagaaattttcattccacagtgtcaaaagctttataaatgtc |
312 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7108827 |
tgacctctatccaattccaaatgttttcattaaaaccaaaagctttcaaaatcttcaaaagaaattttcattccacagtgtcaaaagctttataaatgtc |
7108926 |
T |
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| Q |
313 |
tattttaagggcaagatt |
330 |
Q |
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|||||||||||||||||| |
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| T |
7108927 |
tattttaagggcaagatt |
7108944 |
T |
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