View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16515_low_67 (Length: 285)
Name: NF16515_low_67
Description: NF16515
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16515_low_67 |
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Alignment Details
Target: chr5 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 17 - 281
Target Start/End: Complemental strand, 42476964 - 42476700
Alignment:
| Q |
17 |
agattttgaattgcatcgtcctaccaaacacactcttaatctttggcaactcctaatagagtgtcctatttagcctaaatagaccatgccttccacaata |
116 |
Q |
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| T |
42476964 |
agattttgaattgcatcgtcctaccaaacacactcttaatctttggcaactcctaatagagtgtcctatttagcctaaatagactatgccttccacaata |
42476865 |
T |
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| Q |
117 |
tggtgaaaatctaggatggtcgcagcaataataagcactaaaactaaagtgagcgtgaatttactgtccctcatttttgtgccactattatgaccactat |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42476864 |
tggtgaaaatctaggatggtcgcagcaataataagcactaaaactaaagtgagcgtgaatttactgtccctcatttttgtgccactattatgaccactat |
42476765 |
T |
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| Q |
217 |
agtggatgatttacaatgattgttattatccaaccaaaaccgactatctagagtagtataatcta |
281 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
42476764 |
agtgtatgatttacaatgattgttattatccaaccaaaaccgactatctagagtagtagaatcta |
42476700 |
T |
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