View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16515_low_73 (Length: 265)

Name: NF16515_low_73
Description: NF16515
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16515_low_73
NF16515_low_73
[»] chr8 (40 HSPs)
chr8 (10-251)||(3464081-3464321)
chr8 (63-167)||(490519-490623)
chr8 (32-160)||(18125324-18125452)
chr8 (57-160)||(44529403-44529506)
chr8 (62-160)||(45419418-45419516)
chr8 (32-160)||(42584511-42584639)
chr8 (14-160)||(11523724-11523872)
chr8 (14-160)||(35914602-35914750)
chr8 (37-166)||(42469722-42469852)
chr8 (57-171)||(44047522-44047636)
chr8 (37-167)||(14742076-14742204)
chr8 (16-126)||(26904942-26905053)
chr8 (14-160)||(36545282-36545430)
chr8 (14-160)||(36565242-36565390)
chr8 (10-80)||(37077880-37077952)
chr8 (10-158)||(12491141-12491291)
chr8 (59-169)||(21121326-21121435)
chr8 (62-160)||(29520832-29520930)
chr8 (62-160)||(30198267-30198365)
chr8 (37-166)||(42853999-42854129)
chr8 (85-166)||(27556297-27556378)
chr8 (62-118)||(21425229-21425285)
chr8 (94-166)||(41031415-41031487)
chr8 (94-166)||(41031521-41031593)
chr8 (62-121)||(28169575-28169634)
chr8 (31-157)||(45041320-45041446)
chr8 (84-170)||(5266149-5266235)
chr8 (62-160)||(12611680-12611778)
chr8 (57-115)||(25300277-25300335)
chr8 (62-160)||(30783043-30783141)
chr8 (86-170)||(32931167-32931248)
chr8 (129-171)||(33076374-33076416)
chr8 (62-160)||(39967500-39967598)
chr8 (62-115)||(7615637-7615690)
chr8 (32-160)||(25473404-25473533)
chr8 (39-135)||(28299985-28300082)
chr8 (84-137)||(29700481-29700534)
chr8 (60-160)||(2216468-2216567)
chr8 (87-167)||(32276893-32276973)
chr8 (62-118)||(43904708-43904764)
[»] chr2 (50 HSPs)
chr2 (16-170)||(12734835-12734991)
chr2 (33-166)||(43573125-43573258)
chr2 (14-160)||(31959654-31959802)
chr2 (62-160)||(13474215-13474313)
chr2 (32-160)||(11412860-11412991)
chr2 (59-171)||(3635313-3635425)
chr2 (14-160)||(28508811-28508959)
chr2 (14-160)||(38452687-38452835)
chr2 (14-160)||(25834812-25834959)
chr2 (14-160)||(7326161-7326309)
chr2 (65-160)||(32443822-32443918)
chr2 (14-167)||(451642-451797)
chr2 (14-159)||(8180913-8181060)
chr2 (57-160)||(9496044-9496147)
chr2 (57-167)||(227367-227477)
chr2 (62-160)||(33287604-33287702)
chr2 (32-168)||(3866224-3866361)
chr2 (57-170)||(30306210-30306323)
chr2 (62-163)||(45543071-45543172)
chr2 (37-136)||(9996651-9996751)
chr2 (37-160)||(12141701-12141825)
chr2 (36-103)||(23997758-23997826)
chr2 (14-160)||(36183584-36183732)
chr2 (37-168)||(41197220-41197352)
chr2 (57-160)||(11992109-11992212)
chr2 (57-168)||(12882038-12882149)
chr2 (14-159)||(13149465-13149612)
chr2 (62-161)||(18959094-18959193)
chr2 (37-167)||(38430041-38430171)
chr2 (37-103)||(39029738-39029805)
chr2 (14-162)||(3243652-3243802)
chr2 (62-160)||(9556370-9556468)
chr2 (57-166)||(45367620-45367729)
chr2 (64-160)||(3030864-3030959)
chr2 (84-160)||(12520063-12520139)
chr2 (62-158)||(19336896-19336992)
chr2 (33-116)||(30743682-30743766)
chr2 (15-165)||(35643082-35643234)
chr2 (73-160)||(9531601-9531688)
chr2 (62-145)||(37470149-37470232)
chr2 (37-160)||(41763044-41763167)
chr2 (66-140)||(3720436-3720510)
chr2 (62-160)||(38435135-38435233)
chr2 (32-160)||(2610740-2610869)
chr2 (37-165)||(8197537-8197666)
chr2 (37-165)||(8202297-8202426)
chr2 (83-160)||(10516750-10516827)
chr2 (62-159)||(26670951-26671048)
chr2 (86-170)||(7615476-7615560)
chr2 (64-160)||(39709202-39709298)
[»] chr7 (51 HSPs)
chr7 (36-171)||(38607148-38607284)
chr7 (14-167)||(43491441-43491596)
chr7 (14-160)||(40979929-40980077)
chr7 (14-160)||(2885723-2885871)
chr7 (16-160)||(48919247-48919393)
chr7 (53-169)||(22349794-22349910)
chr7 (37-160)||(27648937-27649061)
chr7 (14-167)||(44855168-44855321)
chr7 (57-170)||(42969876-42969986)
chr7 (32-169)||(12841267-12841405)
chr7 (37-170)||(29650541-29650675)
chr7 (14-165)||(9210700-9210853)
chr7 (32-160)||(21078069-21078198)
chr7 (66-171)||(28208318-28208423)
chr7 (32-160)||(45836483-45836612)
chr7 (37-160)||(7273257-7273381)
chr7 (14-160)||(11594093-11594241)
chr7 (14-168)||(31682595-31682751)
chr7 (36-167)||(32631720-32631852)
chr7 (14-160)||(37618078-37618226)
chr7 (37-160)||(43281831-43281955)
chr7 (60-171)||(34035144-34035255)
chr7 (14-171)||(38900090-38900248)
chr7 (14-171)||(39906362-39906521)
chr7 (37-158)||(28627936-28628058)
chr7 (14-118)||(35559036-35559142)
chr7 (62-160)||(36101778-36101876)
chr7 (62-160)||(38103616-38103712)
chr7 (37-158)||(45601633-45601755)
chr7 (37-160)||(28355322-28355447)
chr7 (14-160)||(1011180-1011327)
chr7 (86-170)||(12966223-12966307)
chr7 (37-160)||(24598189-24598312)
chr7 (57-168)||(6375046-6375157)
chr7 (100-171)||(32368337-32368408)
chr7 (37-159)||(46355858-46355981)
chr7 (84-170)||(4604752-4604838)
chr7 (57-167)||(15682352-15682462)
chr7 (62-115)||(3457544-3457597)
chr7 (16-159)||(31681022-31681164)
chr7 (14-160)||(34869553-34869701)
chr7 (62-118)||(47848856-47848912)
chr7 (57-156)||(33073107-33073206)
chr7 (14-150)||(35906212-35906350)
chr7 (37-121)||(35922410-35922495)
chr7 (65-118)||(36239839-36239892)
chr7 (62-103)||(37976418-37976459)
chr7 (66-102)||(21517439-21517475)
chr7 (84-172)||(25891093-25891181)
chr7 (109-169)||(31005435-31005495)
chr7 (14-140)||(49029409-49029537)
[»] chr1 (50 HSPs)
chr1 (62-160)||(11584180-11584278)
chr1 (14-169)||(4029255-4029412)
chr1 (32-160)||(19936612-19936741)
chr1 (32-168)||(25979224-25979361)
chr1 (62-167)||(34444539-34444644)
chr1 (14-170)||(30202121-30202279)
chr1 (69-166)||(28090689-28090786)
chr1 (14-169)||(34792341-34792498)
chr1 (14-165)||(39318262-39318414)
chr1 (37-160)||(4415506-4415630)
chr1 (10-140)||(18469103-18469235)
chr1 (75-170)||(22175341-22175436)
chr1 (62-160)||(41560412-41560510)
chr1 (14-160)||(1210878-1211026)
chr1 (37-160)||(37311756-37311880)
chr1 (37-160)||(38807672-38807796)
chr1 (14-160)||(49347394-49347542)
chr1 (14-160)||(52921213-52921361)
chr1 (14-167)||(51602189-51602344)
chr1 (62-171)||(6084158-6084267)
chr1 (94-167)||(37430414-37430487)
chr1 (76-140)||(2694440-2694504)
chr1 (57-165)||(15086100-15086208)
chr1 (14-166)||(8672051-8672205)
chr1 (43-160)||(52561590-52561708)
chr1 (63-160)||(10200307-10200404)
chr1 (84-165)||(39123365-39123445)
chr1 (64-169)||(50636266-50636371)
chr1 (60-160)||(2544774-2544874)
chr1 (14-160)||(22090229-22090377)
chr1 (62-126)||(27520242-27520306)
chr1 (57-160)||(4707222-4707324)
chr1 (57-160)||(24020268-24020371)
chr1 (62-145)||(40416554-40416637)
chr1 (62-160)||(8796392-8796490)
chr1 (62-156)||(19908040-19908134)
chr1 (14-118)||(32230997-32231103)
chr1 (57-159)||(37462878-37462979)
chr1 (62-160)||(48431400-48431498)
chr1 (62-171)||(5338896-5339005)
chr1 (64-165)||(11941576-11941677)
chr1 (37-160)||(29128940-29129065)
chr1 (84-169)||(41017209-41017293)
chr1 (84-169)||(44941768-44941853)
chr1 (37-160)||(4001456-4001580)
chr1 (109-169)||(6025835-6025895)
chr1 (84-160)||(26113440-26113516)
chr1 (60-160)||(40568411-40568511)
chr1 (76-140)||(50846759-50846823)
chr1 (62-158)||(52532619-52532715)
[»] chr6 (23 HSPs)
chr6 (15-165)||(32756055-32756207)
chr6 (10-160)||(12890704-12890856)
chr6 (14-167)||(28085509-28085664)
chr6 (37-165)||(34501-34630)
chr6 (32-160)||(9706922-9707051)
chr6 (53-121)||(33497133-33497201)
chr6 (14-167)||(34143759-34143914)
chr6 (14-167)||(34156375-34156530)
chr6 (62-160)||(5096017-5096115)
chr6 (57-166)||(3206454-3206563)
chr6 (14-160)||(9593711-9593857)
chr6 (57-160)||(34934831-34934934)
chr6 (109-167)||(10098890-10098948)
chr6 (57-158)||(30031434-30031535)
chr6 (31-102)||(21351896-21351968)
chr6 (65-140)||(32080655-32080730)
chr6 (57-167)||(5258142-5258252)
chr6 (37-102)||(5631979-5632045)
chr6 (57-102)||(24665989-24666034)
chr6 (62-118)||(3210551-3210607)
chr6 (57-97)||(5081018-5081058)
chr6 (76-140)||(32097934-32097998)
chr6 (64-167)||(34939284-34939388)
[»] chr3 (44 HSPs)
chr3 (45-160)||(54128544-54128660)
chr3 (14-175)||(12096691-12096854)
chr3 (14-167)||(48508368-48508523)
chr3 (32-167)||(5168984-5169120)
chr3 (37-160)||(15296064-15296188)
chr3 (57-160)||(2133613-2133716)
chr3 (32-150)||(19737136-19737254)
chr3 (62-160)||(40106621-40106719)
chr3 (37-170)||(53262298-53262432)
chr3 (59-160)||(38060894-38060995)
chr3 (37-160)||(45289092-45289216)
chr3 (32-150)||(19758039-19758157)
chr3 (53-160)||(48734148-48734255)
chr3 (62-160)||(14415261-14415358)
chr3 (62-160)||(26490498-26490596)
chr3 (32-168)||(22224-22361)
chr3 (57-170)||(47555323-47555436)
chr3 (54-102)||(48953478-48953526)
chr3 (14-160)||(52138933-52139081)
chr3 (57-160)||(52156085-52156188)
chr3 (62-140)||(29601075-29601153)
chr3 (62-160)||(40991614-40991712)
chr3 (73-171)||(52927838-52927936)
chr3 (86-159)||(659732-659805)
chr3 (62-171)||(39208791-39208900)
chr3 (63-160)||(48712076-48712173)
chr3 (37-160)||(49042093-49042218)
chr3 (85-165)||(31146906-31146985)
chr3 (37-160)||(35033303-35033427)
chr3 (89-168)||(7942864-7942943)
chr3 (37-159)||(39600683-39600806)
chr3 (62-157)||(50960641-50960736)
chr3 (57-167)||(311303-311413)
chr3 (57-103)||(30294179-30294225)
chr3 (14-170)||(54279153-54279310)
chr3 (129-170)||(41230506-41230547)
chr3 (52-104)||(17022729-17022781)
chr3 (37-156)||(19676086-19676206)
chr3 (88-160)||(24778610-24778682)
chr3 (37-160)||(25191534-25191658)
chr3 (84-160)||(45486850-45486926)
chr3 (84-160)||(46148233-46148309)
chr3 (62-118)||(49841799-49841855)
chr3 (14-160)||(51447718-51447866)
[»] chr4 (51 HSPs)
chr4 (14-150)||(39708566-39708704)
chr4 (14-167)||(6957731-6957886)
chr4 (57-160)||(28236360-28236463)
chr4 (37-170)||(21528445-21528579)
chr4 (14-171)||(1777007-1777166)
chr4 (32-166)||(48174088-48174223)
chr4 (62-159)||(55388213-55388310)
chr4 (14-168)||(8286572-8286728)
chr4 (37-160)||(26037506-26037630)
chr4 (14-160)||(39100537-39100685)
chr4 (33-172)||(53518313-53518452)
chr4 (10-167)||(33227338-33227497)
chr4 (84-171)||(35690476-35690563)
chr4 (65-171)||(32339745-32339851)
chr4 (42-160)||(34208270-34208388)
chr4 (14-160)||(47265196-47265344)
chr4 (32-165)||(53707946-53708080)
chr4 (96-173)||(44719349-44719426)
chr4 (14-160)||(436362-436510)
chr4 (62-166)||(25575007-25575111)
chr4 (37-160)||(27450181-27450304)
chr4 (64-160)||(28351744-28351840)
chr4 (14-160)||(31959815-31959963)
chr4 (37-160)||(52569516-52569640)
chr4 (62-165)||(5306479-5306582)
chr4 (57-156)||(7947115-7947214)
chr4 (57-160)||(20601653-20601756)
chr4 (10-92)||(20821077-20821160)
chr4 (14-171)||(21236991-21237150)
chr4 (83-166)||(45209200-45209283)
chr4 (62-165)||(53540473-53540576)
chr4 (14-170)||(4440986-4441144)
chr4 (37-102)||(16003083-16003149)
chr4 (57-167)||(19154857-19154967)
chr4 (12-160)||(23906298-23906448)
chr4 (62-168)||(55007929-55008035)
chr4 (84-169)||(13805257-13805342)
chr4 (60-117)||(41729494-41729551)
chr4 (57-166)||(43434102-43434211)
chr4 (37-160)||(32479195-32479319)
chr4 (62-94)||(41340614-41340646)
chr4 (14-160)||(48622544-48622692)
chr4 (37-160)||(51421887-51422011)
chr4 (57-92)||(1793640-1793675)
chr4 (57-160)||(19969359-19969462)
chr4 (14-95)||(50679637-50679720)
chr4 (62-160)||(26024851-26024949)
chr4 (109-170)||(30634097-30634158)
chr4 (61-102)||(46749729-46749770)
chr4 (32-160)||(56375442-56375571)
chr4 (62-118)||(7970424-7970480)
[»] scaffold0024 (1 HSPs)
scaffold0024 (14-160)||(82852-82999)
[»] chr5 (33 HSPs)
chr5 (14-167)||(4496517-4496672)
chr5 (57-160)||(5558319-5558422)
chr5 (14-171)||(10639435-10639594)
chr5 (62-165)||(14667954-14668057)
chr5 (70-160)||(18855798-18855888)
chr5 (14-150)||(38685100-38685238)
chr5 (14-169)||(12492376-12492533)
chr5 (37-160)||(13561387-13561511)
chr5 (14-160)||(29816515-29816663)
chr5 (57-157)||(38501422-38501522)
chr5 (32-162)||(20456925-20457056)
chr5 (32-160)||(3301996-3302125)
chr5 (16-170)||(14665849-14666003)
chr5 (62-167)||(32442120-32442224)
chr5 (62-166)||(43475422-43475526)
chr5 (14-167)||(28976853-28977008)
chr5 (62-160)||(418035-418133)
chr5 (59-169)||(30213755-30213865)
chr5 (86-160)||(36123183-36123257)
chr5 (85-167)||(41894279-41894361)
chr5 (53-170)||(683692-683809)
chr5 (78-159)||(30639301-30639382)
chr5 (32-167)||(2915490-2915625)
chr5 (62-165)||(20367076-20367179)
chr5 (37-114)||(28039-28117)
chr5 (62-160)||(7678661-7678758)
chr5 (32-160)||(16913883-16914013)
chr5 (42-118)||(2090575-2090652)
chr5 (65-154)||(15252751-15252840)
chr5 (62-115)||(35685964-35686017)
chr5 (62-127)||(41808105-41808170)
chr5 (37-92)||(14911329-14911385)
chr5 (14-160)||(24178643-24178791)
[»] scaffold0041 (1 HSPs)
scaffold0041 (37-160)||(16735-16859)
[»] scaffold0045 (1 HSPs)
scaffold0045 (67-160)||(86610-86703)
[»] scaffold0199 (1 HSPs)
scaffold0199 (37-167)||(14740-14871)
[»] scaffold1318 (1 HSPs)
scaffold1318 (32-160)||(483-612)
[»] scaffold0570 (1 HSPs)
scaffold0570 (14-165)||(944-1097)
[»] scaffold0180 (1 HSPs)
scaffold0180 (86-160)||(25444-25518)


Alignment Details
Target: chr8 (Bit Score: 206; Significance: 1e-113; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 10 - 251
Target Start/End: Complemental strand, 3464321 - 3464081
Alignment:
Q  10 agatgaagacataggaaaattatagaaaaaccattaggaaagattaaaggtcaatgagttggatccaaatataatttatgataaaacattatggtatagt 109  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  3464321 agatgaagacataggaaaattatagaaaaattattaggaaagattaaaggtcaatgagttgga-ccaaatataatttatgatagaacattatggtatagt 3464223  T
Q  110 ttgatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttgttgttttcatatcataaatattttttggtttagacattggaaa 209  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3464222 ttgatccatatagtcgattccacttaatgggataagacttgattgttgttgatgttgttgttttcatatcataaatattttttggtttagacattggaaa 3464123  T
Q  210 atattttgattatttttcttctctccaaatatttgaaagtat 251  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  3464122 atattttgattatttttcatctctcgaaatatttgaaagtat 3464081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 63 - 167
Target Start/End: Original strand, 490519 - 490623
Alignment:
Q  63 atgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttgat 162  Q
    |||||||||||||||||||  ||||||||| ||||||||||  || |||||||||| ||| |||  |||||||||||| |||| |||| ||||||||| |    
T  490519 atgagttggatccaaatatggtttatgatagaacattatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttgtttgttgttgtt 490618  T
Q  163 gttgt 167  Q
    |||||    
T  490619 gttgt 490623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 32 - 160
Target Start/End: Original strand, 18125324 - 18125452
Alignment:
Q  32 tagaaaaaccattaggaaagatt-aaaggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattcc 130  Q
    |||| |||||||||| ||||||| ||| ||||||||||||||||||||||| |||||||||| || | |||||| || ||||||| || ||||| |  |     
T  18125324 tagagaaaccattagaaaagatttaaaagtcaatgagttggatccaaatatgatttatgatagaatactatggtgta-tttgatcaatgtagtcaacccg 18125422  T
Q  131 acttagtggggtaagacttgattgttgttg 160  Q
    |||||||||| ||| ||||| |||||||||    
T  18125423 acttagtgggataaaacttggttgttgttg 18125452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 57 - 160
Target Start/End: Original strand, 44529403 - 44529506
Alignment:
Q  57 aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgtt 156  Q
    ||||||||||||||||||||||| |  ||||||||| |||| ||||| ||  |||||||||| ||| |||  |||||||||||| |||| |||| |||||    
T  44529403 aggtcaatgagttggatccaaatttggtttatgatagaacactatggcatcatttgatccatgtagccgaccccacttagtgggataaggcttggttgtt 44529502  T
Q  157 gttg 160  Q
    ||||    
T  44529503 gttg 44529506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 45419418 - 45419516
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    |||||||| ||||||||| |  ||||||||| ||||||||||| || |||||||||| ||| |||  |||||||||||| |||| |||| |||||||||    
T  45419418 aatgagtttgatccaaatttggtttatgatagaacattatggtgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 45419516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 160
Target Start/End: Original strand, 42584511 - 42584639
Alignment:
Q  32 tagaaaaaccattaggaaagat-taaaggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattcc 130  Q
    ||||||||| || ||||||||| || |||| ||||| ||||||||||||||  ||||||||| |||||||||   || |||||| | | ||| |||  ||    
T  42584511 tagaaaaactataaggaaagatctataggttaatgatttggatccaaatatggtttatgatagaacattatgacgtaatttgat-cttgtagccgacccc 42584609  T
Q  131 acttagtggggtaagacttgattgttgttg 160  Q
    |||||||||| |||||||||||||||||||    
T  42584610 acttagtgggataagacttgattgttgttg 42584639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 160
Target Start/End: Complemental strand, 11523872 - 11523724
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| ||| ||| |||||||||| || |||| | ||||||||||||||||||||||| |  | ||||||| |||| |||||  |  |||    
T  11523872 gaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcattt 11523773  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||||||| ||| |||  |||||||||||| |||| |||| |||||||||    
T  11523772 gatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 11523724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 160
Target Start/End: Complemental strand, 35914750 - 35914602
Alignment:
Q  14 gaagacataggaaaattata-gaaaaaccattaggaaaga-ttaaaggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||||||| |||| |||| || |||| ||||||||||| || ||| | ||||||||||| | ||||||  ||||||||| ||||||||||  || |||    
T  35914750 gaagacatagaaaaactataagagaaactattaggaaagacttgaagattaatgagttggaccaaaatatggtttatgatagaacattatggcgtaattt 35914651  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||||||| |||  ||  |||||||||| | ||||||||| |||||||||    
T  35914650 gatccatgtagctgaccccacttagtgagataagacttggttgttgttg 35914602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 166
Target Start/End: Complemental strand, 42469852 - 42469722
Alignment:
Q  37 aaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccactta 135  Q
    |||||||||| ||||||| | |||||||||||||||||||||||||  ||| ||||| |||| |||||  |  |||||||||| |||  ||  |||||||    
T  42469852 aaaccattagaaaagatttagaggtcaatgagttggatccaaatatggtttttgatagaacactatggcgtcatttgatccatgtagctgaccccactta 42469753  T
Q  136 gtggggtaagacttgattgttgttgatgttg 166  Q
     |||| |||| |||| ||||||||| |||||    
T  42469752 ttgggataaggcttggttgttgttgttgttg 42469722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 171
Target Start/End: Complemental strand, 44047636 - 44047522
Alignment:
Q  57 aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgtt 156  Q
    ||||||||||||||||||||||| |  ||||||||| ||||  ||||  |  |||||||||| |||  ||  |||||||||||| |||| |||| |||||    
T  44047636 aggtcaatgagttggatccaaatttggtttatgatagaacaccatggcgtcatttgatccatgtagctgaccccacttagtgggataaggcttggttgtt 44047537  T
Q  157 gttgatgttgttgtt 171  Q
    |||| ||||||||||    
T  44047536 gttgttgttgttgtt 44047522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 167
Target Start/End: Complemental strand, 14742204 - 14742076
Alignment:
Q  37 aaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccactta 135  Q
    |||||||||| ||||||| | | |||||||||||||||||||||||   || ||||| |||| |||||  |  |||||||||| ||| |||  |||||||    
T  14742204 aaaccattagaaaagatttagaagtcaatgagttggatccaaatat---ttttgatagaacactatggcgtcatttgatccatgtagccgaccccactta 14742108  T
Q  136 gtggggtaagacttgattgttgttgatgttgt 167  Q
    ||||| |||| |||| ||||||||| ||||||    
T  14742107 gtgggataaggcttggttgttgttgttgttgt 14742076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 26905053 - 26904942
Alignment:
Q  16 agacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttga 113  Q
    |||| |||||||| ||| ||| |||||||||| ||||||| | |||||||| ||||||| ||||||||| ||||| |||||||| ||||   || |||||    
T  26905053 agacctaggaaaactattagagaaaccattagaaaagatttagaggtcaataagttgga-ccaaatatagtttataataaaacactatgtcgtaatttga 26904955  T
Q  114 tccatatagtcga 126  Q
    |||||||||||||    
T  26904954 tccatatagtcga 26904942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 160
Target Start/End: Original strand, 36545282 - 36545430
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| ||| ||| |||||||||| || |||| | ||||||||||||||||||||||| |  | ||||||| |||| ||||   |  |||    
T  36545282 gaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatgacgtcattt 36545381  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||||||| ||| |||  |||||||||||| |||| |||| |||||||||    
T  36545382 gatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 36545430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 160
Target Start/End: Complemental strand, 36565390 - 36565242
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| ||| ||| |||||||||| || |||| | ||||||||||||||||||||||| |  | ||||||| |||| |||||  |  |||    
T  36565390 gaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgttattt 36565291  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||||||| ||| |||  |||||||||||| |||| || | |||||||||    
T  36565290 gatccatgtagccgaccccacttagtgggataaggctcggttgttgttg 36565242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 37077880 - 37077952
Alignment:
Q  10 agatgaagacataggaaaattata-gaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaata 80  Q
    |||||||||| ||||||||||||| || |||||||||| || |||| | ||||||||||||||||||||||||    
T  37077880 agatgaagacctaggaaaattataagagaaaccattagaaaggatttagaggtcaatgagttggatccaaata 37077952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 158
Target Start/End: Complemental strand, 12491291 - 12491141
Alignment:
Q  10 agatgaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtata 107  Q
    |||||||||| || ||||| ||| ||| |||||||||| || |||| | ||||||||||||||||||||||| |  | ||||||| |||| |||||  |     
T  12491291 agatgaagacctatgaaaactattagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtc 12491192  T
Q  108 gtttgatccatatagtcgattccacttagtggggtaagacttgattgttgt 158  Q
     |||||||||| ||| |||  |||||||||||| |||| |||  |||||||    
T  12491191 atttgatccatgtagccgaccccacttagtgggataaggcttagttgttgt 12491141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 169
Target Start/End: Original strand, 21121326 - 21121435
Alignment:
Q  59 gtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgt 158  Q
    ||||||||||||||||| |||||  ||||||||| |||| |||||  || |||||| ||| ||| |||  ||||||||||||  ||| |||| |||||||    
T  21121326 gtcaatgagttggatcctaatatggtttatgatagaacactatggcgtaatttgat-catgtagccgaccccacttagtgggaaaaggcttggttgttgt 21121424  T
Q  159 tgatgttgttg 169  Q
    || ||||||||    
T  21121425 tgttgttgttg 21121435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 29520832 - 29520930
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||||||||||||||||||||  ||||||||| ||||||||||  || |||||||||| ||| | |  ||| |||||||| |||  |||| |||||||||    
T  29520832 aatgagttggatccaaatatggtttatgatagaacattatggcgtaatttgatccatgtagcccaccccatttagtgggataatgcttggttgttgttg 29520930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 30198365 - 30198267
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    |||||||||||||  |||||  ||||||||| || |||||||| |||||||||| || | | |||  |||||||||||| |||| |||| |||||||||    
T  30198365 aatgagttggatcggaatatggtttatgatagaatattatggtgtagtttgatctatgttgccgaccccacttagtgggataaggcttggttgttgttg 30198267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 166
Target Start/End: Complemental strand, 42854129 - 42853999
Alignment:
Q  37 aaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccactta 135  Q
    |||||||||| ||||||| | |||||||||||||||||||||||||  ||| ||||| |||| |||||  |  |||||||||| ||| |||  ||| |||    
T  42854129 aaaccattagaaaagatttagaggtcaatgagttggatccaaatatggtttttgatataacactatggcgtcatttgatccatgtagccgaccccattta 42854030  T
Q  136 gtggggtaagacttgattgttgttgatgttg 166  Q
    ||||| ||||  ||| | ||||||| |||||    
T  42854029 gtgggataaggtttggtggttgttgttgttg 42853999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 166
Target Start/End: Complemental strand, 27556378 - 27556297
Alignment:
Q  85 ttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttg 166  Q
    |||||||| |||||||||| ||| |||||||||| ||| |||  |||||||||||| |||  |||| ||||||||| |||||    
T  27556378 ttatgatagaacattatggcataatttgatccatgtagccgaccccacttagtgggttaaagcttggttgttgttgttgttg 27556297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 21425229 - 21425285
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccat 118  Q
    ||||||||||||| |||||| |||||||||| | |||||||| ||| ||||||||||    
T  21425229 aatgagttggatcgaaatatgatttatgatagaccattatggcataatttgatccat 21425285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 166
Target Start/End: Complemental strand, 41031487 - 41031415
Alignment:
Q  94 aacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttg 166  Q
    |||||||||  ||| |||||||||||||| |||  |||||||||||| |||| |||| ||||||||| |||||    
T  41031487 aacattatgagataatttgatccatatagccgaccccacttagtgggataaggcttggttgttgttgttgttg 41031415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 166
Target Start/End: Complemental strand, 41031593 - 41031521
Alignment:
Q  94 aacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttg 166  Q
    |||||||||  ||| |||||||||||||| |||  |||||||||||| |||| |||| ||||||||| |||||    
T  41031593 aacattatgagataatttgatccatatagccgaccccacttagtgggataaggcttggttgttgttgttgttg 41031521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 121
Target Start/End: Original strand, 28169575 - 28169634
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatata 121  Q
    |||||||||||| |||||||  |||||||||||| |||||||| || ||| |||||||||    
T  28169575 aatgagttggattcaaatatggtttatgataaaatattatggtgtaattttatccatata 28169634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 157
Target Start/End: Complemental strand, 45041446 - 45041320
Alignment:
Q  31 atagaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattc 129  Q
    ||||| |||| ||||||||||||| | |||| |||||||||||||||| |||  |||||||||   ||||||||  || |||||||||| |||  ||  |    
T  45041446 atagagaaactattaggaaagatttagaggttaatgagttggatccaa-tatggtttatgatagcgcattatggcgtaatttgatccatgtagctgaccc 45041348  T
Q  130 cacttagtggggtaagacttgattgttg 157  Q
    ||||||||||| |||| |||| ||||||    
T  45041347 cacttagtgggataaggcttggttgttg 45041320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 170
Target Start/End: Original strand, 5266149 - 5266235
Alignment:
Q  84 tttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttgttgt 170  Q
    |||||||||||||||||||  || |||||||| || ||| ||| | || |||||||| |||   ||||||||||||| |||||||||    
T  5266149 tttatgataaaacattatgacatcgtttgatctatgtagccgactgcatttagtgggataaactttgattgttgttgttgttgttgt 5266235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 12611680 - 12611778
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    |||||||||| |  |||||| || |||| || ||| ||||||| | ||||||||||| ||| |||| ||| |||||||| |||| |||| |||||||||    
T  12611680 aatgagttgggtagaaatatgatatatgttagaactttatggtgtcgtttgatccatgtagccgatcccaattagtgggataaggcttggttgttgttg 12611778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 115
Target Start/End: Original strand, 25300277 - 25300335
Alignment:
Q  57 aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatc 115  Q
    |||||||||||||||||||||||||  ||||||||| |||| ||||  ||| |||||||    
T  25300277 aggtcaatgagttggatccaaatatggtttatgatataacactatgacataatttgatc 25300335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 30783141 - 30783043
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||||||||||||| |||||   ||||| |||||||||||||   ||||||||||||| ||| |||  |||  ||||||| ||| |||||| ||||||||    
T  30783141 aatgagttggatcgaaatacggtttataataaaacattatgaggtagtttgatccatgtagccgaccccatctagtgggataaaacttgactgttgttg 30783043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 170
Target Start/End: Original strand, 32931167 - 32931248
Alignment:
Q  86 tatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttgttgt 170  Q
    ||||||| |||||||||| ||| |||||||||| ||| |||  ||||||||||||  ||| ||||   |||||||||||||||||    
T  32931167 tatgatagaacattatggcataatttgatccatgtagccgaccccacttagtgggaaaagccttg---gttgttgatgttgttgt 32931248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 171
Target Start/End: Original strand, 33076374 - 33076416
Alignment:
Q  129 ccacttagtggggtaagacttgattgttgttgatgttgttgtt 171  Q
    |||||||||||| ||||| ||||||||||||| ||||||||||    
T  33076374 ccacttagtgggataagatttgattgttgttgttgttgttgtt 33076416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 39967598 - 39967500
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||||||||||||  | ||||| |||||| || ||||||||||  ||||||||||||| ||| |||| ||||||| || | |||  |||| |||||||||    
T  39967598 aatgagttggattgagatatagtttatgttagaacattatggcgtagtttgatccatgtagccgatcccacttattgtgataatgcttggttgttgttg 39967500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 7615690 - 7615637
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatc 115  Q
    ||||||||||||| ||||||| |||||||||||| |||||| | || |||||||    
T  7615690 aatgagttggatcgaaatatagtttatgataaaatattatgatgtaatttgatc 7615637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 160
Target Start/End: Complemental strand, 25473533 - 25473404
Alignment:
Q  32 tagaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattcc 130  Q
    |||| |||||||||| || |||| | ||||||||||||| ||||||||| |  | ||||||| |||| ||| |  |  |||||||||| ||| |||  ||    
T  25473533 tagagaaaccattagaaaggatttagaggtcaatgagtttgatccaaatttggtgtatgatagaacactatagcgtcatttgatccatgtagccgacccc 25473434  T
Q  131 acttagtggggtaagacttgattgttgttg 160  Q
    |||||||||| |||| |||| |||||||||    
T  25473433 acttagtgggataaggcttggttgttgttg 25473404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 39 - 135
Target Start/End: Complemental strand, 28300082 - 28299985
Alignment:
Q  39 accattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccactta 135  Q
    ||||||||||||| |||| || | ||||||||||||| ||| || ||||||||||||||| ||||   || || | ||||| |||||||| |||||||    
T  28300082 accattaggaaagtttaatagattaatgagttggatctaaacatgatttatgataaaacaatatgacgtatttcggtccatgtagtcgatcccactta 28299985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 29700481 - 29700534
Alignment:
Q  84 tttatgataaaacattatggtatagtttgatccatatagtcgattccacttagt 137  Q
    ||||||||| ||||||||||| || |||||||||| ||| ||| ||||||||||    
T  29700481 tttatgatagaacattatggtgtaatttgatccatgtagccgactccacttagt 29700534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 160
Target Start/End: Original strand, 2216468 - 2216567
Alignment:
Q  60 tcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgtt 159  Q
    |||||||||||||||| |||||  ||||||||| |||||||| || || |||||||||| ||| |||  ||||| |||| | |||| |||| | ||||||    
T  2216468 tcaatgagttggatcctaatat-gtttatgatagaacattatagtgtaatttgatccatgtagccgaccccactcagtgagataaggcttggtggttgtt 2216566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 167
Target Start/End: Original strand, 32276893 - 32276973
Alignment:
Q  87 atgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttgt 167  Q
    |||||| ||||||||||  || |||||||||| ||| |||  |||||||||||| |||  |||| ||||||||| ||||||    
T  32276893 atgatagaacattatggcgtaatttgatccatgtagacgaacccacttagtgggataaagcttggttgttgttgttgttgt 32276973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 43904764 - 43904708
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccat 118  Q
    ||||||||||||| ||||||  ||||||||| ||||||||||  || ||||||||||    
T  43904764 aatgagttggatctaaatatggtttatgatagaacattatggcgtaatttgatccat 43904708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 1e-28; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 170
Target Start/End: Original strand, 12734835 - 12734991
Alignment:
Q  16 agacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttga 113  Q
    |||| |||||||| ||| ||| |||||||||| || |||| | |||||||||||||||||||||||||  ||||||||| |||| |||||| || |||||    
T  12734835 agacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatatggtttatgatagaacactatggtgtaatttga 12734934  T
Q  114 tccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttgttgt 170  Q
    ||||| |||||||  |||||||||||| |||| |||| ||||||||| |||||||||    
T  12734935 tccatgtagtcgaccccacttagtgggataaggcttggttgttgttgttgttgttgt 12734991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 33 - 166
Target Start/End: Complemental strand, 43573258 - 43573125
Alignment:
Q  33 agaaaaaccattaggaaagattaaaggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccac 132  Q
    |||||||| | ||||||||||| ||||| |||||||||||||||||||| |||||||||  ||| ||||||  || |||||||||| ||| |||  ||||    
T  43573258 agaaaaacaactaggaaagatttaaggttaatgagttggatccaaatatgatttatgatcgaacgttatggcgtaatttgatccatgtagccgaccccac 43573159  T
Q  133 ttagtggggtaagacttgattgttgttgatgttg 166  Q
    |||||||| |||| |||| ||||||||| |||||    
T  43573158 ttagtgggataaggcttggttgttgttgttgttg 43573125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 160
Target Start/End: Original strand, 31959654 - 31959802
Alignment:
Q  14 gaagacataggaaaattata-gaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| |||| || |||||||||| || |||| | |||||||||||||||||||||||||  ||||||||| |||| ||||| ||| |||    
T  31959654 gaagacctaggaaaactataagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatatggtttatgatagaacactatggcataattt 31959753  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||||||| |||  ||  ||||||||| || |||| |||| |||||||||    
T  31959754 gatccatgtagcagaccccacttagtaggataaggcttggttgttgttg 31959802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 13474313 - 13474215
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    |||||||||||||  |||||  |||||||||| ||||||||| ||| ||||||| ||  |||||| ||||||||||||| ||||||||| |||||||||    
T  13474313 aatgagttggatcggaatatggtttatgataatacattatggcataatttgatctattgagtcgactccacttagtgggataagacttggttgttgttg 13474215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 32 - 160
Target Start/End: Original strand, 11412860 - 11412991
Alignment:
Q  32 tagaaaaaccattaggaaagattaaaggtcaatgagttggatccaaatataatttatga---taaaacattatggtatagtttgatccatatagtcgatt 128  Q
    ||||||||| |||||||||||||| || | ||||||||||||||||||||  |||||||   || ||||||||||| || |||||||||| ||| |||      
T  11412860 tagaaaaactattaggaaagattagagattaatgagttggatccaaatatggtttatgatagtagaacattatggtgtaatttgatccatgtagccgaac 11412959  T
Q  129 ccacttagtggggtaagacttgattgttgttg 160  Q
     |||||||| || |||| |||| |||||||||    
T  11412960 tcacttagtaggataaggcttggttgttgttg 11412991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 59 - 171
Target Start/End: Complemental strand, 3635425 - 3635313
Alignment:
Q  59 gtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgt 158  Q
    |||||||||||||||||||||||  ||| ||||| |||| |||||  |  |||||||||| ||| |||  |||||||||||| |||| |||| |||||||    
T  3635425 gtcaatgagttggatccaaatatggtttttgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgt 3635326  T
Q  159 tgatgttgttgtt 171  Q
    || ||||||||||    
T  3635325 tgttgttgttgtt 3635313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 160
Target Start/End: Original strand, 28508811 - 28508959
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| ||| ||| |||||||||| || |||| | ||||||||||||||||||||||| |  ||||||||| |||| |||||  |  |||    
T  28508811 gaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtttatgatagaacactatggcgtcattt 28508910  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||||||| ||| |||  |||||||||||| |||| |||| |||||||||    
T  28508911 gatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 28508959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 160
Target Start/End: Complemental strand, 38452835 - 38452687
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| ||| ||| |||||||||| || |||| | ||||||||||||||||||||||| |  | |||||||||||| |||||| |  ||     
T  38452835 gaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgataaaacactatggtgtcattc 38452736  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||||||| ||| |||  |||||||||||| |||| |||| |||||||||    
T  38452735 gatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 38452687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 160
Target Start/End: Original strand, 25834812 - 25834959
Alignment:
Q  14 gaagacataggaaaattatagaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttg 112  Q
    |||||| |||||||| | || | |||||||||| || |||| | |||||||||||||||||||||||||  ||||||||| |||| | |||  |  ||||    
T  25834812 gaagacctaggaaaactttaaagaaaccattagaaaggatttagaggtcaatgagttggatccaaatatggtttatgatagaacactgtggcgtcatttg 25834911  T
Q  113 atccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    |||||| ||| |||  |||||||||||| |||| |||| |||||||||    
T  25834912 atccatgtagccgaccccacttagtgggataaggcttggttgttgttg 25834959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 160
Target Start/End: Complemental strand, 7326309 - 7326161
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    ||||||||||||||| ||| ||| |||||||||| || |||| | ||||||||||||||||||||||| |  | ||||||| |||| |||||  |  |||    
T  7326309 gaagacataggaaaactattagagaaaccattagaaatgatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcattt 7326210  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||||||| ||| | |  |||||||||||| |||| |||| |||||||||    
T  7326209 gatccatgtagccaaccccacttagtgggataaggcttggttgttgttg 7326161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 160
Target Start/End: Original strand, 32443822 - 32443918
Alignment:
Q  65 gagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtgggg-taagacttgattgttgttg 160  Q
    ||||| ||| |||||||| ||||| | |||||||||||| ||| |||||||||| ||| ||| |||||||||||||| ||||||||  |||||||||    
T  32443822 gagtttgattcaaatatagtttataacaaaacattatggcataatttgatccatgtagccgactccacttagtggggataagacttagttgttgttg 32443918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 167
Target Start/End: Complemental strand, 451797 - 451642
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| ||| ||| |||||||||| || |||| | |||||| |||||||||||||||| || | ||||||| |||| |||||  |  |||    
T  451797 gaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcagtgagttggatccaaatttagtgtatgatagaacactatggcgtcattt 451698  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttgt 167  Q
    ||||||| ||| |||  ||||||||||||  ||| |||| ||||||||| ||||||    
T  451697 gatccatgtagccgaccccacttagtgggacaaggcttggttgttgttgttgttgt 451642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 8180913 - 8181060
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    ||||||||||||||| ||| ||| |||||||||| || |||| | ||||||||||||||||||||||| |  | ||||||| |||| ||| || |  |||    
T  8180913 gaagacataggaaaactattagataaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatagtgtcattt 8181012  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgtt 159  Q
    ||||||| ||| |||  |||||||||||| |||| |||  ||||||||    
T  8181013 gatccatgtagccgaccccacttagtgggataaggcttcgttgttgtt 8181060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 57 - 160
Target Start/End: Original strand, 9496044 - 9496147
Alignment:
Q  57 aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgtt 156  Q
    |||| ||||||||||||||||||||  ||||||||| ||||||||||  || |||||||||| ||| | |  ||||||||||||  ||| |||| |||||    
T  9496044 aggttaatgagttggatccaaatatggtttatgatagaacattatggcgtaatttgatccatgtagccaaccccacttagtgggacaaggcttggttgtt 9496143  T
Q  157 gttg 160  Q
    ||||    
T  9496144 gttg 9496147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 167
Target Start/End: Original strand, 227367 - 227477
Alignment:
Q  57 aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgtt 156  Q
    ||||||||||||||||||||||| |  | ||||||| |||| |||||  |  |||||||||| ||| |||  |||||||||||| |||| |||| |||||    
T  227367 aggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgtt 227466  T
Q  157 gttgatgttgt 167  Q
    |||| ||||||    
T  227467 gttgttgttgt 227477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 33287604 - 33287702
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    |||||||| |||| ||||||  ||||||||| |||||||||  |||||||||||| | ||| | | |||||||||||||  |||||||| |||||||||    
T  33287604 aatgagttagatcgaaatatggtttatgatagaacattatgacatagtttgatccttgtagccaactccacttagtgggacaagacttggttgttgttg 33287702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 168
Target Start/End: Original strand, 3866224 - 3866361
Alignment:
Q  32 tagaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattcc 130  Q
    |||| |||||||||| || |||| | ||||||||||||||||||||||| |  | ||||||| |||| ||||  ||  |||||||||| ||| |||  ||    
T  3866224 tagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatgacatcatttgatccatgtagccgacccc 3866323  T
Q  131 acttagtggggtaagacttgattgttgttgatgttgtt 168  Q
    ||||||| || |||| |||| ||||||||| |||||||    
T  3866324 acttagtaggataaggcttggttgttgttgttgttgtt 3866361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 170
Target Start/End: Original strand, 30306210 - 30306323
Alignment:
Q  57 aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgtt 156  Q
    |||||| |||||||||||||||| |  ||||||||| |||| |||||  |  |||||||||| ||| |||  |||||||||||| |||| |||| |||||    
T  30306210 aggtcattgagttggatccaaatttggtttatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgtt 30306309  T
Q  157 gttgatgttgttgt 170  Q
    |||| |||| ||||    
T  30306310 gttgttgttattgt 30306323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 163
Target Start/End: Complemental strand, 45543172 - 45543071
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttga 161  Q
    |||||||| |||||||||||  ||||||||| ||||||||||  || ||||||| || ||| |||  |||||||||||| |||  |||| ||||||||||    
T  45543172 aatgagttcgatccaaatatggtttatgatagaacattatggcgtactttgatctatgtagccgaccccacttagtgggataatgcttgcttgttgttga 45543073  T
Q  162 tg 163  Q
    ||    
T  45543072 tg 45543071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 136
Target Start/End: Complemental strand, 9996751 - 9996651
Alignment:
Q  37 aaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccactta 135  Q
    |||||||||| || |||| | ||||||| |||||||||||||||||  |||||||| ||||| ||||| ||| |||||||||| ||| |||  |||||||    
T  9996751 aaaccattagaaaggatttagaggtcaacgagttggatccaaatatggtttatgattaaacactatggcataatttgatccatgtagccgaccccactta 9996652  T
Q  136 g 136  Q
    |    
T  9996651 g 9996651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 160
Target Start/End: Original strand, 12141701 - 12141825
Alignment:
Q  37 aaaccattaggaaaga-ttaaaggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccactta 135  Q
    |||| ||||||||||| ||| || | ||||| ||||||||||||||  | ||||||| |||||||||| ||  ||||||| || ||| | |  ||| |||    
T  12141701 aaactattaggaaagacttagagattaatgacttggatccaaatatggtatatgatagaacattatggcatgatttgatcgatgtagccaaccccattta 12141800  T
Q  136 gtggggtaagacttgattgttgttg 160  Q
    |||||||||| ||||||||||||||    
T  12141801 gtggggtaaggcttgattgttgttg 12141825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 36 - 103
Target Start/End: Original strand, 23997758 - 23997826
Alignment:
Q  36 aaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatgg 103  Q
    ||||||||||| ||||||| | |||||||||||||||||||||||||  ||| |||||||||| |||||    
T  23997758 aaaaccattagaaaagatttagaggtcaatgagttggatccaaatatggtttttgataaaacactatgg 23997826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 160
Target Start/End: Original strand, 36183584 - 36183732
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| ||| ||| |||||||||| || |||| | | ||||||||||||||||||||| | || ||||||| |||| ||||||    |||    
T  36183584 gaagacctaggaaaactattagagaaaccattagaaaggatttagaagtcaatgagttggatccaaatttgatgtatgatagaacactatggtgccattt 36183683  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||||||| ||| |||  ||||||||| || |||| |||| |||||||||    
T  36183684 gatccatgtagccgaccccacttagtaggataaggcttggttgttgttg 36183732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 168
Target Start/End: Complemental strand, 41197352 - 41197220
Alignment:
Q  37 aaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccactta 135  Q
    |||||||||  ||||||| | ||||||| ||||||||||| |||||  ||| ||||| ||||||||||  |  |||||||||| |||||||  ||||||     
T  41197352 aaaccattataaaagatttagaggtcaacgagttggatcccaatatggtttttgatagaacattatggcgtcatttgatccatgtagtcgaccccacttg 41197253  T
Q  136 gtggggtaagacttgattgttgttgatgttgtt 168  Q
     |||| |||| |||| ||||||||| |||||||    
T  41197252 atgggataaggcttggttgttgttgttgttgtt 41197220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 160
Target Start/End: Complemental strand, 11992212 - 11992109
Alignment:
Q  57 aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgtt 156  Q
    ||||||||||||| ||||||||||| |||| ||||| ||||||||||  |  |||||||||| |||  ||  |||||||||||  |||| |||| |||||    
T  11992212 aggtcaatgagttagatccaaatatgatttttgatagaacattatggcgttatttgatccatgtagctgaccccacttagtggaataaggcttggttgtt 11992113  T
Q  157 gttg 160  Q
    ||||    
T  11992112 gttg 11992109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 168
Target Start/End: Complemental strand, 12882149 - 12882038
Alignment:
Q  57 aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgtt 156  Q
    |||| ||||||||||||||||||||  ||| ||||| |||||| |||  || |||||||||| ||| | |   ||||||||||| |||| |||| |||||    
T  12882149 aggttaatgagttggatccaaatatggtttgtgatagaacattttggcgtaatttgatccatgtagcctacctcacttagtgggataaggcttggttgtt 12882050  T
Q  157 gttgatgttgtt 168  Q
    |||| |||||||    
T  12882049 gttgttgttgtt 12882038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 13149465 - 13149612
Alignment:
Q  14 gaagacataggaaaattata-gaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| |||| || |||| |||| |||||||| | |||| ||||||| | ||||||||||  || |||||| |||||||||  ||| |||    
T  13149465 gaagacttaggaaaactataagagaaactattatgaaagatttagaggttaatgagtagaatccaaatatcgttgatgatagaacattatgacataattt 13149564  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgtt 159  Q
    ||||||||||| ||||  || ||| || | ||||||||| ||||||||    
T  13149565 gatccatatagccgatctcaattaatgagataagacttggttgttgtt 13149612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 161
Target Start/End: Original strand, 18959094 - 18959193
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttga 161  Q
    ||||||||||||| ||||||  | ||||||| |||||||||| ||| |||||||||| |||  ||  |||||||||||| |||| |||| || |||||||    
T  18959094 aatgagttggatcaaaatatggtctatgatagaacattatggcataatttgatccatgtagctgaccccacttagtgggataaggcttggttattgttga 18959193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 167
Target Start/End: Original strand, 38430041 - 38430171
Alignment:
Q  37 aaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccactta 135  Q
    |||||||||| ||||||| | |||||||||||||||||||||||||  ||| ||||| |||| |||||  |  |||||||||| ||| |||  |||||||    
T  38430041 aaaccattagaaaagatttagaggtcaatgagttggatccaaatatggtttttgatagaacactatggcgtcatttgatccatgtagccgaccccactta 38430140  T
Q  136 gtggggtaagacttgattgttgttgatgttgt 167  Q
    ||| | |||| ||||  |||||||| ||||||    
T  38430141 gtgagataaggcttg-gtgttgttgttgttgt 38430171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 39029738 - 39029805
Alignment:
Q  37 aaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatgg 103  Q
    |||||||||| ||||||| | |||||||||||||||||||||||||  ||| ||||| ||||||||||    
T  39029738 aaaccattagaaaagatttagaggtcaatgagttggatccaaatatggtttttgatagaacattatgg 39029805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 162
Target Start/End: Complemental strand, 3243802 - 3243652
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| ||| ||| |||||||||| || |||| | ||||||||||||||||||||| | |  | ||||||| |||| |||||  |  |||    
T  3243802 gaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagttggatccaagtttggtgtatgatagaacactatggcgtcattt 3243703  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttgat 162  Q
    ||||||  ||| |||  |||||||||||| |||| |||| |||||||||||    
T  3243702 gatccaggtagccgaccccacttagtgggataaggcttggttgttgttgat 3243652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 9556468 - 9556370
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||||||||||||| | ||||  ||||||||| ||||||| ||| || |||||| ||| ||| ||| ||||||||||||| | || |||| |||||||||    
T  9556468 aatgagttggatcaagatatggtttatgatagaacattagggtgtaatttgatacatgtagccgactccacttagtgggatgaggcttggttgttgttg 9556370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 166
Target Start/End: Complemental strand, 45367729 - 45367620
Alignment:
Q  57 aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgtt 156  Q
    |||| |||||||||||||||||||| |||| ||||| |||| ||||   |  |||||||||| | | |||  |||||||||||| ||| ||||| |||||    
T  45367729 aggtaaatgagttggatccaaatatgatttttgatagaacactatgacgtcatttgatccatgtcgccgaccccacttagtgggataaaacttgtttgtt 45367630  T
Q  157 gttgatgttg 166  Q
    |||| |||||    
T  45367629 gttgttgttg 45367620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 160
Target Start/End: Original strand, 3030864 - 3030959
Alignment:
Q  64 tgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    |||||||||||| ||||||  |||||||| |||||||||| ||| ||| |||||| ||| |||  |||||||||||| |||| |||| | |||||||    
T  3030864 tgagttggatcccaatatagattatgatacaacattatggcataattttatccatgtag-cgaccccacttagtgggataagccttggtcgttgttg 3030959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 12520139 - 12520063
Alignment:
Q  84 tttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    |||||||||||||| |||||  || |||||||||| ||| |||  |||||||||||| |||| |||| |||||||||    
T  12520139 tttatgataaaacactatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 12520063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 158
Target Start/End: Complemental strand, 19336992 - 19336896
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgt 158  Q
    ||||||||||||| ||||||  ||||||||| ||||||||||  || |||||||||| ||| | || ||||||| |||| |||  |||| |||||||    
T  19336992 aatgagttggatcgaaatatggtttatgatagaacattatggcgtaatttgatccatgtagccaatcccacttattgggataaagcttggttgttgt 19336896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 116
Target Start/End: Original strand, 30743682 - 30743766
Alignment:
Q  33 agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatcc 116  Q
    |||||||||||||| || |||| | |||||||||||||| |||||||||| |||||| ||| |||| ||||  ||| ||||||||    
T  30743682 agaaaaaccattagaaatgatttagaggtcaatgagttgaatccaaatatgatttataatagaacaatatgtcataatttgatcc 30743766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 165
Target Start/End: Original strand, 35643082 - 35643234
Alignment:
Q  15 aagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttg 112  Q
    ||||| |||||||| ||| ||| |||||||||| || |||| | ||||||||||||||||||||||| |  | ||||||| |||| ||||  ||  |||     
T  35643082 aagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatgacatcattta 35643181  T
Q  113 atccatatagtcgattccacttagtggggtaagacttgattgttgttgatgtt 165  Q
    || ||| ||| |||  |||||||||||| |||| |||| ||||||||| ||||    
T  35643182 atacatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 35643234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 160
Target Start/End: Complemental strand, 9531688 - 9531601
Alignment:
Q  73 tccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    |||||||||  ||||||||  ||||||||||  || |||||||||| ||| |||  |||||||||||| |||| |||| |||||||||    
T  9531688 tccaaatatggtttatgatggaacattatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 9531601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 145
Target Start/End: Complemental strand, 37470232 - 37470149
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaag 145  Q
    ||||||||||||| ||||||    ||||||| ||||||||||| ||||||||||||| |||   || |||||||||||| ||||    
T  37470232 aatgagttggatcgaaatatggcatatgatagaacattatggtgtagtttgatccatgtagctaatcccacttagtgggataag 37470149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 160
Target Start/End: Complemental strand, 41763167 - 41763044
Alignment:
Q  37 aaaccattaggaaagattaaaggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttag 136  Q
    |||||||||| ||| ||| ||||||||| ||||||||||||||||  ||| ||||| ||||    ||  |  |||||||||| ||| |||  ||||||||    
T  41763167 aaaccattagaaaaaatttaaggtcaattagttggatccaaatatgttttttgatagaacacccgggcgtcatttgatccatgtagccgaccccacttag 41763068  T
Q  137 tggggtaagacttgattgttgttg 160  Q
    |||| |||| |||| |||||||||    
T  41763067 tgggataaggcttggttgttgttg 41763044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 140
Target Start/End: Complemental strand, 3720510 - 3720436
Alignment:
Q  66 agttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggg 140  Q
    ||||||||| ||| ||  ||||||||| ||||||||||| || |||||||||| ||| |||  ||||||||||||    
T  3720510 agttggatcgaaaaatggtttatgatagaacattatggtgtaatttgatccatgtagccgaccccacttagtggg 3720436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 38435135 - 38435233
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    |||| |||||||| |||| |  ||||||||  ||||||||||  || |||||||||| ||| |||| |||||||||||  |||| |||| |||||||||    
T  38435135 aatgtgttggatcgaaatttggtttatgattgaacattatggcgtaatttgatccatgtagccgatcccacttagtggcataaggcttggttgttgttg 38435233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 160
Target Start/End: Original strand, 2610740 - 2610869
Alignment:
Q  32 tagaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattcc 130  Q
    |||| |||||||||| || |||| | ||||||||||||||||||||||| |  | ||||||| |||| |||||  |  |||||||||| ||  |||  ||    
T  2610740 tagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgttatttgatccatgtaaccgacccc 2610839  T
Q  131 acttagtggggtaagacttgattgttgttg 160  Q
    |||||||| | |||| |||| |||||||||    
T  2610840 acttagtgagataaggcttggttgttgttg 2610869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 165
Target Start/End: Complemental strand, 8197666 - 8197537
Alignment:
Q  37 aaaccattaggaaagat-taaaggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccactta 135  Q
    |||| |||| ||||||| ||||| | ||||||||||||  |||||| || ||||||| || |||||||  | ||||||||||| ||| |||  | |||||    
T  8197666 aaactattaagaaagatctaaagattaatgagttggatagaaatatgatatatgatagaatattatggcgtcgtttgatccatgtagccgaccctactta 8197567  T
Q  136 gtggggtaagacttgattgttgttgatgtt 165  Q
    ||||| |||  |||| ||||||||| ||||    
T  8197566 gtgggataatgcttggttgttgttgttgtt 8197537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 165
Target Start/End: Complemental strand, 8202426 - 8202297
Alignment:
Q  37 aaaccattaggaaagat-taaaggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccactta 135  Q
    |||| |||| ||||||| ||||| | ||||||||||||  |||||| || ||||||| || |||||||  | ||||||||||| ||| |||  | |||||    
T  8202426 aaactattaagaaagatctaaagattaatgagttggatagaaatatgatatatgatagaatattatggcgtcgtttgatccatgtagccgaccctactta 8202327  T
Q  136 gtggggtaagacttgattgttgttgatgtt 165  Q
    ||||| |||  |||| ||||||||| ||||    
T  8202326 gtgggataatgcttggttgttgttgttgtt 8202297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 10516827 - 10516750
Alignment:
Q  83 atttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||||||||||||| |||||||  || |||||||||| |||  |||  ||||||||||| |||| |||| |||||||||    
T  10516827 atttatgataaaatattatggcgtaatttgatccatgtagctgatctcacttagtgggataaggcttggttgttgttg 10516750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 159
Target Start/End: Original strand, 26670951 - 26671048
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgtt 159  Q
    ||||||||||| | |||||| |||||||||| || || ||||| || |||||||||| ||| |||  |  ||||||||| ||||||||| || |||||    
T  26670951 aatgagttggaccaaaatatgatttatgatagaatataatggtgtaatttgatccatgtagccgacactgcttagtgggataagacttggttattgtt 26671048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 170
Target Start/End: Original strand, 7615476 - 7615560
Alignment:
Q  86 tatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttgttgt 170  Q
    |||||||||||||||||   |  |||||||| | ||  |||| ||| |||||||| |||| | ||||||||||||||||||||||    
T  7615476 tatgataaaacattatgtcgtcatttgatccgtctatccgataccaattagtgggataaggcctgattgttgttgatgttgttgt 7615560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 160
Target Start/End: Complemental strand, 39709298 - 39709202
Alignment:
Q  64 tgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||||||||||| ||||||  ||||||||  |||| |||||  || |||||||||| ||| |||  |||||||||||| || | |||| |||||||||    
T  39709298 tgagttggatcaaaatatggtttatgattgaacactatggcgtaatttgatccatgtagccgaccccacttagtgggatatggcttggttgttgttg 39709202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 7e-24; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 36 - 171
Target Start/End: Original strand, 38607148 - 38607284
Alignment:
Q  36 aaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccactt 134  Q
    ||||||||||| || |||| | |||||||||||||||||||||||||  ||| ||||| |||| |||||  | ||||||||||| ||| ||| |||||||    
T  38607148 aaaaccattagaaaggatttagaggtcaatgagttggatccaaatatggtttttgatagaacactatggcgtcgtttgatccatgtagccgactccactt 38607247  T
Q  135 agtggggtaagacttgattgttgttgatgttgttgtt 171  Q
    |||||| |||| |||| ||||||||| ||||||||||    
T  38607248 agtgggttaaggcttggttgttgttgttgttgttgtt 38607284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 14 - 167
Target Start/End: Original strand, 43491441 - 43491596
Alignment:
Q  14 gaagacataggaaaattata-gaaaaaccattaggaaaga--ttaaaggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtt 110  Q
    |||||| ||||||||||||| || |||||||||| |||||  ||| |||||||| |||||||||||||||| |||||||||| |||| |||| | || ||    
T  43491441 gaagacctaggaaaattataagagaaaccattag-aaagaatttagaggtcaataagttggatccaaatatgatttatgatagaacactatgatgtaatt 43491539  T
Q  111 tgatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttgt 167  Q
    | |||||| ||| |||  |||||||||||| |||| |||| ||||||||| ||||||    
T  43491540 tcatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgt 43491596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 160
Target Start/End: Complemental strand, 40980077 - 40979929
Alignment:
Q  14 gaagacataggaaaattata-gaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| |||| || |||| ||||| ||||||| | |||||||||||||||||||||||||  ||||||||| |||| |||||  || |||    
T  40980077 gaagacctaggaaaactataagagaaactattagaaaagatttagaggtcaatgagttggatccaaatatggtttatgatagaacactatggcgtaattt 40979978  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||||||| ||| |||  |||||||||||| |||| |||| |||||||||    
T  40979977 gatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 40979929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 160
Target Start/End: Complemental strand, 2885871 - 2885723
Alignment:
Q  14 gaagacataggaaaattata-gaaaaaccattaggaaagattaaa-ggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| |||| || |||||||||| || |||| |  ||||||||||||||| ||||||||  ||||||||| |||| |||||| || |||    
T  2885871 gaagacctaggaaaactataagagaaaccattagaaatgatttagtggtcaatgagttggacccaaatatggtttatgatagaacactatggtgtaattt 2885772  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||||||| ||| |||  |||||||||||| |||| |||| |||||||||    
T  2885771 gatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 2885723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 160
Target Start/End: Original strand, 48919247 - 48919393
Alignment:
Q  16 agacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttga 113  Q
    |||| |||||||| ||| |||||||||||||| || |||| | ||||||||||||| |||||||||||  ||||||||||| || |||||  |  |||||    
T  48919247 agacctaggaaaactattagaaaaaccattagaaatgatttagaggtcaatgagtttgatccaaatatggtttatgataaaccactatggcgtcatttga 48919346  T
Q  114 tccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||||| |||||||  ||||||| |||| |||| |||| |||||||||    
T  48919347 tccatgtagtcgaccccacttaatgggataaggcttggttgttgttg 48919393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 169
Target Start/End: Original strand, 22349794 - 22349910
Alignment:
Q  53 ttaaaggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgat 152  Q
    |||||||||||| |||||||||||||| |  | ||||||| || | |||||  |  |||||||||| |||||||  |||||||||||| |||| ||||||    
T  22349794 ttaaaggtcaataagttggatccaaatttggtatatgatagaatactatggcgtcatttgatccatgtagtcgaccccacttagtgggataaggcttgat 22349893  T
Q  153 tgttgttgatgttgttg 169  Q
    |||||||| ||||||||    
T  22349894 tgttgttgttgttgttg 22349910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 37 - 160
Target Start/End: Original strand, 27648937 - 27649061
Alignment:
Q  37 aaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccactta 135  Q
    |||||||||| ||||||| | ||||||||||||||||||||||| |  ||||||||| |||| | |||  || |||||||||| ||| |||  |||||||    
T  27648937 aaaccattagaaaagatttagaggtcaatgagttggatccaaatttggtttatgatagaacactgtggcgtaatttgatccatgtagccgaccccactta 27649036  T
Q  136 gtggggtaagacttgattgttgttg 160  Q
    ||||| |||| |||| |||||||||    
T  27649037 gtgggataaggcttggttgttgttg 27649061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 167
Target Start/End: Complemental strand, 44855321 - 44855168
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| ||| ||| |||||||||| ||||||| | ||||||||||||||||||||||| |  ||||||||  |||| |||||  || |||    
T  44855321 gaagacctaggaaaactattagagaaaccattagaaaagatttagaggtcaatgagttggatccaaatttggtttatgat--aacactatggcgtaattt 44855224  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttgt 167  Q
    | ||||| ||| |||  |||||||||||| |||| |||| ||||||||| ||||||    
T  44855223 ggtccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgt 44855168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 57 - 170
Target Start/End: Original strand, 42969876 - 42969986
Alignment:
Q  57 aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgtt 156  Q
    |||| ||||||||||||||||||||  ||||||||  |||||||| ||||| |||||||||| ||| |||  |||||||||||| |||| ||   |||||    
T  42969876 aggttaatgagttggatccaaatatggtttatgattgaacattatcgtataatttgatccatgtagccgaccccacttagtgggataaggct---ttgtt 42969972  T
Q  157 gttgatgttgttgt 170  Q
     |||||||||||||    
T  42969973 attgatgttgttgt 42969986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 169
Target Start/End: Complemental strand, 12841405 - 12841267
Alignment:
Q  32 tagaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattcc 130  Q
    |||| |||||||||| || |||| | |||||||||||||| |||||||| |  ||||||||| |||| |||||  |  |||||||||| ||| |||  ||    
T  12841405 tagagaaaccattagaaaggatttagaggtcaatgagttgtatccaaatttggtttatgatagaacactatggcgtcatttgatccatgtagccgacccc 12841306  T
Q  131 acttagtggggtaagacttgattgttgttgatgttgttg 169  Q
    |||||||||| |||| |||| ||||||||| ||||||||    
T  12841305 acttagtgggataaggcttggttgttgttgttgttgttg 12841267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 170
Target Start/End: Original strand, 29650541 - 29650675
Alignment:
Q  37 aaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccactta 135  Q
    |||||||||| ||||||| | ||||||||||||| |||||||||||  ||| ||||| |||| || ||  |  |||||||||| ||| |||  |||||||    
T  29650541 aaaccattagaaaagatttagaggtcaatgagtttgatccaaatatggtttttgatagaacactaaggcgtcatttgatccatgtagccgaccccactta 29650640  T
Q  136 gtggggtaagacttgattgttgttgatgttgttgt 170  Q
    ||||| |||| |||| ||||||||| |||||||||    
T  29650641 gtgggataaggcttggttgttgttgttgttgttgt 29650675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 165
Target Start/End: Complemental strand, 9210853 - 9210700
Alignment:
Q  14 gaagacataggaaaattata-gaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| |||| || ||||  |||||||| ||| | |||| ||||||||||||||||||||  ||||||||| ||||||||||  || |||    
T  9210853 gaagacctaggaaaactataagagaaacttttaggaaaaatttagaggttaatgagttggatccaaatatggtttatgatacaacattatggcgtaattt 9210754  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgtt 165  Q
    ||||||| |||  ||  |||||||||||| |||| |||  ||||||||| ||||    
T  9210753 gatccatgtagctgaccccacttagtgggataaggcttcgttgttgttgttgtt 9210700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 160
Target Start/End: Original strand, 21078069 - 21078198
Alignment:
Q  32 tagaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattcc 130  Q
    |||| |||||||||| ||||||| | ||||||||||||||||||||||| |  | ||||||| ||||||||||  |  |||||||||| ||| ||| | |    
T  21078069 tagagaaaccattagtaaagatttagaggtcaatgagttggatccaaatttggtgtatgatagaacattatggcgtcatttgatccatgtagccgacttc 21078168  T
Q  131 acttagtggggtaagacttgattgttgttg 160  Q
    | |||||||| |||| |||| |||||||||    
T  21078169 atttagtgggataaggcttggttgttgttg 21078198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 171
Target Start/End: Complemental strand, 28208423 - 28208318
Alignment:
Q  66 agttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgtt 165  Q
    ||||||||||||||||  ||||||||| |||| |||||  |  |||||||||| ||| |||  |||||||||||| |||| |||| ||||||||| ||||    
T  28208423 agttggatccaaatatggtttatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 28208324  T
Q  166 gttgtt 171  Q
    ||||||    
T  28208323 gttgtt 28208318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 160
Target Start/End: Complemental strand, 45836612 - 45836483
Alignment:
Q  32 tagaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattcc 130  Q
    |||| |||||||||| || |||| | |||||||||||||||||||||||||  ||||||||| |||| |||||  |  |||||||||| ||| |||  ||    
T  45836612 tagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatatggtttatgatagaacactatggcgtcatttgatccatgtagccgacccc 45836513  T
Q  131 acttagtggggtaagacttgattgttgttg 160  Q
    |||||||||| |||| || | |||||||||    
T  45836512 acttagtgggataaggctcggttgttgttg 45836483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 160
Target Start/End: Original strand, 7273257 - 7273381
Alignment:
Q  37 aaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccactta 135  Q
    |||||||||| ||| ||| | ||||||||||||||||| |||||||  ||||||||| | || ||||   || |||||||||| ||| |||  |||||||    
T  7273257 aaaccattagaaaatattcagaggtcaatgagttggattcaaatatggtttatgatatagcactatgacgtaatttgatccatgtagccgaccccactta 7273356  T
Q  136 gtggggtaagacttgattgttgttg 160  Q
    ||||| |||| ||||||||||||||    
T  7273357 gtgggataaggcttgattgttgttg 7273381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 160
Target Start/End: Original strand, 11594093 - 11594241
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| ||| ||| |||||||||| || |||| | ||||||||||||||||||||||| |  | ||||||| |||| |||||  |  |||    
T  11594093 gaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcattt 11594192  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||||||| ||| |||  |||||||||||| |||| |||| |||||||||    
T  11594193 gatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 11594241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 168
Target Start/End: Complemental strand, 31682751 - 31682595
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| ||| ||| |||||||||| || |||| | |||||||||| ||||||||| || |  ||||||||| |||| |||||  |  |||    
T  31682751 gaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgaattggatccatatttggtttatgatagaacactatggcgtcattt 31682652  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttgtt 168  Q
    ||||||| ||| |||  |||||||||||| |||| |||| ||||||||| |||||||    
T  31682651 gatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgtt 31682595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 167
Target Start/End: Original strand, 32631720 - 32631852
Alignment:
Q  36 aaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccactt 134  Q
    ||||||||||| ||||||| | |||||||||||||||||||||||||  ||| ||||| |||  |||||  |  ||||||| || ||| |||  ||||||    
T  32631720 aaaaccattagaaaagatttagaggtcaatgagttggatccaaatatggtttttgatagaacgctatggcgtcatttgatctatgtagccgaccccactt 32631819  T
Q  135 agtggggtaagacttgattgttgttgatgttgt 167  Q
    |||||| |||| |||| ||||||||| ||||||    
T  32631820 agtgggataaggcttggttgttgttgttgttgt 32631852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 160
Target Start/End: Original strand, 37618078 - 37618226
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| ||| ||| |||||||||| || |||| | |||||||| |||||||||||||| |  | ||||||| |||| |||||| |  |||    
T  37618078 gaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaataagttggatccaaatttggtgtatgatagaacactatggtgtcattt 37618177  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||||||| ||| |||  |||||||||||| |||| |||| |||||||||    
T  37618178 gatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 37618226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 160
Target Start/End: Original strand, 43281831 - 43281955
Alignment:
Q  37 aaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccactta 135  Q
    |||||||||| ||||||| | |||||||||||||||||||||||||  ||| ||||| |||| |||||  |  |||||||||| ||| |||  |||||||    
T  43281831 aaaccattagaaaagatttagaggtcaatgagttggatccaaatatggtttttgatagaacactatggcgtcatttgatccatgtagccgaccccactta 43281930  T
Q  136 gtggggtaagacttgattgttgttg 160  Q
    |||||  ||| |||| |||||||||    
T  43281931 gtgggacaaggcttggttgttgttg 43281955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 171
Target Start/End: Complemental strand, 34035255 - 34035144
Alignment:
Q  60 tcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgtt 159  Q
    ||||||||||||||||||||||  || |||||| |||| |||||  |  |||||||||| ||| |||  |||||||||||| | || |||| ||||||||    
T  34035255 tcaatgagttggatccaaatatggttcatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggattaggcttggttgttgtt 34035156  T
Q  160 gatgttgttgtt 171  Q
    | ||||||||||    
T  34035155 gctgttgttgtt 34035144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 171
Target Start/End: Original strand, 38900090 - 38900248
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| ||| ||| |||||||||| || |||| | ||||||||||||||||||||||| |  | ||||||  |||| |||||  |  |||    
T  38900090 gaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgattgaacactatggcgtcattt 38900189  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttgttgtt 171  Q
    ||||||| ||| |||  |||||||||||| |||| |||| ||||||||| ||||||||||    
T  38900190 gatccatgtagccgac-ccacttagtgggataaggcttggttgttgttgttgttgttgtt 38900248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 171
Target Start/End: Complemental strand, 39906521 - 39906362
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| ||| ||| |||||||||| || |||| | |||||||||| |||||||||||| |  | ||||||| |||| |||||  |  |||    
T  39906521 gaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgacttggatccaaatttggtgtatgatagaacactatggcgtcattt 39906422  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttgttgtt 171  Q
    ||||||| ||| |||  |||||||||||| |||| |||| ||||||||| |||| |||||    
T  39906421 gatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttattgtt 39906362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 158
Target Start/End: Complemental strand, 28628058 - 28627936
Alignment:
Q  37 aaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccactta 135  Q
    |||| ||||||||||||| | || | |||||||||||| ||||| |  ||||||||| ||||||||||  || |||||||||| ||| ||| ||||||||    
T  28628058 aaactattaggaaagatttagagattaatgagttggatgcaaatgtggtttatgatagaacattatggcgtaatttgatccatgtagccgactccactta 28627959  T
Q  136 gtggggtaagacttgattgttgt 158  Q
    ||||| |||| |||  |||||||    
T  28627958 gtgggataaggcttagttgttgt 28627936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 118
Target Start/End: Complemental strand, 35559142 - 35559036
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| ||| ||| |||||||||| ||||||| | ||||||||||||||||||||||| || |||||| || |||||||| | ||  |||    
T  35559142 gaagacctaggaaaactattagagaaaccattagaaaagatttagaggtcaatgagttggatccaaatttagtttatggtagaacattatagcatcattt 35559043  T
Q  112 gatccat 118  Q
    |||||||    
T  35559042 gatccat 35559036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 36101876 - 36101778
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||||||||||||| ||||||  ||||||||| |||||||||   || |||||||||| |||| ||  |||||||||||| |||| |||| |||||||||    
T  36101876 aatgagttggatcaaaatatggtttatgatagaacattatgacgtaatttgatccatgtagttgaccccacttagtgggataaggcttggttgttgttg 36101778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 38103712 - 38103616
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||||||||||||||||||||  |||||||| |||||||||||| || |||||||| | ||| |||  ||| |||||||| ||||||||| |||||||||    
T  38103712 aatgagttggatccaaatattgtttatgat-aaacattatggtgtaatttgatcc-tgtagccgaccccagttagtgggataagacttggttgttgttg 38103616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 158
Target Start/End: Original strand, 45601633 - 45601755
Alignment:
Q  37 aaaccattaggaaagat-taaaggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccactta 135  Q
    ||||||||| ||||||| || || | ||||||||||||| |||||| |||||||||| |||| |||||| || |||||||||| |||  ||   ||||||    
T  45601633 aaaccattaagaaagatctagagattaatgagttggatcaaaatatgatttatgatagaacactatggtgtaatttgatccatgtagctgaactcactta 45601732  T
Q  136 gtggggtaagacttgattgttgt 158  Q
    ||||| |||| |||| |||||||    
T  45601733 gtgggataaggcttggttgttgt 45601755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 160
Target Start/End: Original strand, 28355322 - 28355447
Alignment:
Q  37 aaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtc-gattccactt 134  Q
    |||| ||||||||||||| | |||| |||||| |||||| ||||||  ||||||||||||||||||||   | |||||||||  ||||| ||  ||||||    
T  28355322 aaactattaggaaagatttataggttaatgaggtggatcaaaatatggtttatgataaaacattatggcggaatttgatccacgtagtctgaccccactt 28355421  T
Q  135 agtggggtaagacttgattgttgttg 160  Q
    |||||| |||| |||| |||||||||    
T  28355422 agtgggataaggcttggttgttgttg 28355447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 160
Target Start/End: Original strand, 1011180 - 1011327
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagatt-aaaggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| ||| |||||||| ||| |||  ||||||||| ||| |||||| ||||| |||||||||| |||  |||| |||| ||||||||||| || |||    
T  1011180 gaagacctagaaaaattatgagagaaattattaggaaatatttaaaggttaatgatttggatccaa-tatggtttaggatagaacattatggtgtaattt 1011278  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    |||| || ||| |||  |||||||||||| |||| |||| |||||||||    
T  1011279 gatctatgtagccgaccccacttagtgggataaggcttggttgttgttg 1011327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 86 - 170
Target Start/End: Original strand, 12966223 - 12966307
Alignment:
Q  86 tatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttgttgt 170  Q
    ||||||||| |||||||  || ||||||| ||| ||| |||| |||||||||||| |||| |||| ||||||||| |||||||||    
T  12966223 tatgataaatcattatgccattgtttgattcatgtagccgatcccacttagtgggataaggcttggttgttgttgttgttgttgt 12966307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 160
Target Start/End: Complemental strand, 24598312 - 24598189
Alignment:
Q  37 aaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccactta 135  Q
    |||||||||| ||||||| | |||||||||||||| |||||||||| |||| ||||| || ||| ||| ||  |||||||||| ||| ||| | || |||    
T  24598312 aaaccattagaaaagatttagaggtcaatgagttgaatccaaatatgatttttgatagaatattttggcatcatttgatccatgtagccgact-cattta 24598214  T
Q  136 gtggggtaagacttgattgttgttg 160  Q
     |||| ||||||||| |||||||||    
T  24598213 atgggataagacttggttgttgttg 24598189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 168
Target Start/End: Original strand, 6375046 - 6375157
Alignment:
Q  57 aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgtt 156  Q
    |||||| |||||||||||||||| || | ||||||| |||| |||||  |  |||||||||| ||| |||  |||||||||||| |||| |||| |||||    
T  6375046 aggtcagtgagttggatccaaatttagtgtatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgtt 6375145  T
Q  157 gttgatgttgtt 168  Q
    || | |||||||    
T  6375146 gtcgttgttgtt 6375157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 171
Target Start/End: Complemental strand, 32368408 - 32368337
Alignment:
Q  100 atggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttgttgtt 171  Q
    ||||| || |||||||||||| |||||| | |||||||| | ||||||||||||||||||| ||||| ||||    
T  32368408 atggtgtaatttgatccatattgtcgatcctacttagtgagataagacttgattgttgttgttgttgctgtt 32368337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 159
Target Start/End: Complemental strand, 46355981 - 46355858
Alignment:
Q  37 aaaccattaggaaagatt-aaaggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccactta 135  Q
    |||||||||| || |||| ||||||||||||||||||||||||| |  | ||||||| |||| ||||  ||  |||||||||| ||| |||  |||||||    
T  46355981 aaaccattagaaaggatttaaaggtcaatgagttggatccaaatctggtgtatgatagaacactatgccatcatttgatccatgtagccgaccccactta 46355882  T
Q  136 gtggggtaagacttgattgttgtt 159  Q
    ||| | |||| |||| ||||||||    
T  46355881 gtgagataaggcttggttgttgtt 46355858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 84 - 170
Target Start/End: Original strand, 4604752 - 4604838
Alignment:
Q  84 tttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttgttgt 170  Q
    ||||||||| ||||||||||  || |||||||||| ||| | |  |||||||||||| ||||||||| || |||||| |||||||||    
T  4604752 tttatgatagaacattatggcgtactttgatccatgtagccaaccccacttagtgggataagacttggttcttgttgttgttgttgt 4604838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 167
Target Start/End: Original strand, 15682352 - 15682462
Alignment:
Q  57 aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgtt 156  Q
    |||||||| |||||||||||||||| |||||||||| |||| |||||  || |||||||||| ||| | |  |||||||||| | |||  |||| | |||    
T  15682352 aggtcaataagttggatccaaatatgatttatgatagaacactatggcgtactttgatccatgtagccaaccccacttagtgagataaagcttggtagtt 15682451  T
Q  157 gttgatgttgt 167  Q
    |||| ||||||    
T  15682452 gttgttgttgt 15682462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 3457544 - 3457597
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatc 115  Q
    ||||||||||||| ||||||  |||||||||||||||||||| ||| |||||||    
T  3457544 aatgagttggatcaaaatattgtttatgataaaacattatggcataatttgatc 3457597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 159
Target Start/End: Complemental strand, 31681164 - 31681022
Alignment:
Q  16 agacataggaaaattatagaaaaaccattaggaaagattaaagg-tcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgat 114  Q
    |||| ||||||||||| |||||  ||||||| || |||| |||| ||||||||||||||||||||||   |||||||| || | ||||   || ||||||    
T  31681164 agacctaggaaaattagagaaa--ccattagaaaggatttaagggtcaatgagttggatccaaatatggcttatgatagaatactatgacgtaatttgat 31681067  T
Q  115 ccatatagtcgattccacttagtggggtaagacttgattgttgtt 159  Q
    |||| ||| |||  ||||||||||||  ||| |||| ||||||||    
T  31681066 ccatgtagccgaccccacttagtgggaaaaggcttggttgttgtt 31681022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 160
Target Start/End: Original strand, 34869553 - 34869701
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| ||| ||| |||||||||| || |||| | ||||||||||||||||||||||| |  | ||||||| |||| |||||  |  |||    
T  34869553 gaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcattt 34869652  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||||||| ||| |||  | | |||||||| |||| |||| |||||||||    
T  34869653 gatccatgtagccgaccctaattagtgggataaggcttggttgttgttg 34869701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 47848856 - 47848912
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccat 118  Q
    |||||| |||||||||||||  ||||||||| ||||||||||| || ||||||||||    
T  47848856 aatgagctggatccaaatatggtttatgatagaacattatggtttaatttgatccat 47848912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 57 - 156
Target Start/End: Original strand, 33073107 - 33073206
Alignment:
Q  57 aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgtt 156  Q
    ||||||||||||||||||||||| |  | ||| |||||||| ||||   |  |||||||||| ||| |||| |||||||||||| |||| |||| |||||    
T  33073107 aggtcaatgagttggatccaaatttggtgtataataaaacaatatgacgtcatttgatccatgtagccgatcccacttagtgggataaggcttggttgtt 33073206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 150
Target Start/End: Complemental strand, 35906350 - 35906212
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| ||| ||| |||||||||| || ||||   ||||||||||||||||||||||| |  | ||||||| |||| |||||  |  |||    
T  35906350 gaagacctaggaaaactattagagaaaccattagaaaggatttcgaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcattt 35906251  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttg 150  Q
    ||||||| ||| |||  |||||||||||| |||| ||||    
T  35906250 gatccatgtagccgaccccacttagtgggataaggcttg 35906212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 121
Target Start/End: Original strand, 35922410 - 35922495
Alignment:
Q  37 aaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatata 121  Q
    |||| |||| |||||||| | |||| ||||||||| ||| |||||| |||||||||| |||||||||   || |||||||||||||    
T  35922410 aaactattaagaaagatttagaggttaatgagttgaatctaaatatgatttatgatagaacattatgacctaatttgatccatata 35922495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 36239892 - 36239839
Alignment:
Q  65 gagttggatccaaatataatttatgataaaacattatggtatagtttgatccat 118  Q
    |||||||||||||||||  ||||||||| ||||||||||  || ||||||||||    
T  36239892 gagttggatccaaatatgctttatgatagaacattatggcgtaatttgatccat 36239839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 103
Target Start/End: Original strand, 37976418 - 37976459
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatgg 103  Q
    ||||||||||||||||||||  ||||||||| ||||||||||    
T  37976418 aatgagttggatccaaatatggtttatgatagaacattatgg 37976459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 102
Target Start/End: Complemental strand, 21517475 - 21517439
Alignment:
Q  66 agttggatccaaatataatttatgataaaacattatg 102  Q
    |||||||||||||||| |||||||||| |||||||||    
T  21517475 agttggatccaaatatgatttatgatataacattatg 21517439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 172
Target Start/End: Original strand, 25891093 - 25891181
Alignment:
Q  84 tttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttgttgttt 172  Q
    ||||| ||| ||||||||||| || |||||||||| ||| |||  |||||||||  | |||| |||| ||||||||| || ||||||||    
T  25891093 tttataatagaacattatggtgtaatttgatccatgtagccgaccccacttagtacgataaggcttggttgttgttgttgatgttgttt 25891181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 169
Target Start/End: Original strand, 31005435 - 31005495
Alignment:
Q  109 tttgatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttgttg 169  Q
    |||||||||| ||| |||  |||||||||||| |||| |||| ||||||||| ||||||||    
T  31005435 tttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgttg 31005495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 140
Target Start/End: Original strand, 49029409 - 49029537
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| ||| ||| |||||||||| || |||| | ||||||||||||||||||||||| |  | ||||||| |||| |||||  |  |||    
T  49029409 gaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcattt 49029508  T
Q  112 gatccatatagtcgattccacttagtggg 140  Q
    ||||||| ||| | |  ||||||||||||    
T  49029509 gatccatgtagccaaccccacttagtggg 49029537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 1e-22; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 11584180 - 11584278
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||||| ||||| ||||||||  | |||||||||||||||||||||| |||||||||| ||  ||| ||||||||||||| |||||||||||||||||||    
T  11584180 aatgaattggacccaaatatggtctatgataaaacattatggtataatttgatccatctaaccgactccacttagtgggataagacttgattgttgttg 11584278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 169
Target Start/End: Original strand, 4029255 - 4029412
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagatt-aaaggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| ||| ||| |||||||||| || |||| ||||||||||||||||||||||||| |  | ||||||| |||| |||||     |||    
T  4029255 gaagacctaggaaaactattagagaaaccattagaaaggatttaaaggtcaatgagttggatccaaatttggtgtatgatataacactatggcgacattt 4029354  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttgttg 169  Q
    ||||||| ||| |||  |||||||||||| ||||||||| ||||||||| ||||||||    
T  4029355 gatccatgtagccgaccccacttagtgggataagacttggttgttgttgttgttgttg 4029412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 160
Target Start/End: Original strand, 19936612 - 19936741
Alignment:
Q  32 tagaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattcc 130  Q
    ||||||||| ||||||||||||| | | || |||||||| |||||||||||  || |||||| ||||||| ||  || |||||||||| ||| ||| |||    
T  19936612 tagaaaaactattaggaaagatttagatgttaatgagttagatccaaatatggttaatgatagaacattacggcgtaatttgatccatgtagccgactcc 19936711  T
Q  131 acttagtggggtaagacttgattgttgttg 160  Q
     ||||||||| |||||||||||||||||||    
T  19936712 gcttagtgggataagacttgattgttgttg 19936741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 168
Target Start/End: Complemental strand, 25979361 - 25979224
Alignment:
Q  32 tagaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattcc 130  Q
    |||| |||||||||| || |||| | |||||||||||||||||||||||||  ||||||||| |||| |||||  |  |||||||||| ||| |||  ||    
T  25979361 tagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatatggtttatgatagaacactatggcgtcatttgatccatgtagccgacccc 25979262  T
Q  131 acttagtggggtaagacttgattgttgttgatgttgtt 168  Q
    |||||||||| |||| |||| ||||||||| |||||||    
T  25979261 acttagtgggataaggcttggttgttgttgttgttgtt 25979224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 62 - 167
Target Start/End: Original strand, 34444539 - 34444644
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttga 161  Q
    ||||||||||||||||||||  ||||| ||||||||||||||| || ||||||| || ||| |||  |||||||||||| |||| |||| |||||||||     
T  34444539 aatgagttggatccaaatatggtttataataaaacattatggtgtaatttgatctatgtagccgaccccacttagtgggataaggcttggttgttgttgt 34444638  T
Q  162 tgttgt 167  Q
    ||||||    
T  34444639 tgttgt 34444644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 170
Target Start/End: Complemental strand, 30202279 - 30202121
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| ||| ||| |||||||||| || |||| | ||||||||||||||||||||||| |  | ||||||| |||| |||||  |  |||    
T  30202279 gaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcattt 30202180  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttgttgt 170  Q
    ||||||| ||| |||  |||||||||||| |||| |||| ||||||||| |||||||||    
T  30202179 gatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgttgt 30202121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 28090786 - 28090689
Alignment:
Q  69 tggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttg 166  Q
    |||||||||||||  ||||||||| ||||||||||  || |||||||||| ||| |||  |||||||||||| ||||||||| ||||||||| |||||    
T  28090786 tggatccaaatatggtttatgatagaacattatggcgtaatttgatccatgtagccgaccccacttagtgggataagacttggttgttgttgttgttg 28090689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 169
Target Start/End: Complemental strand, 34792498 - 34792341
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagatt-aaaggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| ||| ||| |||||||||| || |||| ||||||||||||||||||||||||| |  ||||||||| |||| |||||  |  |||    
T  34792498 gaagacctaggaaaactattagagaaaccattagaaaggatttaaaggtcaatgagttggatccaaatttggtttatgatagaacactatggcgtcattt 34792399  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttgttg 169  Q
    ||||||| ||| |||  ||||||| |||| |||| |||| ||||||||| || |||||    
T  34792398 gatccatgtagccgaccccacttaatgggataaggcttggttgttgttgttgctgttg 34792341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 165
Target Start/End: Original strand, 39318262 - 39318414
Alignment:
Q  14 gaagacataggaaaattata-gaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| |||| || |||||||||| || |||| | |||||||||||||||||||||||||  ||||||||| |||| |||||  || |||    
T  39318262 gaagacctaggaaaactataagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatatggtttatgatagaacactatggcgtaattt 39318361  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgtt 165  Q
    ||||||| ||| |||  || ||||||||| |||| |||| ||||||||| ||||    
T  39318362 gatccatgtagccga-cccgcttagtgggataaggcttgtttgttgttgttgtt 39318414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 37 - 160
Target Start/End: Original strand, 4415506 - 4415630
Alignment:
Q  37 aaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccactta 135  Q
    |||||||||| ||||||| | |||||||||||||||||| |||||| |||| | ||| |||||||||| ||  |||||||||| ||| ||| |||| |||    
T  4415506 aaaccattagaaaagatttagaggtcaatgagttggatctaaatatgattttttatagaacattatggcatcatttgatccatgtagccgactccattta 4415605  T
Q  136 gtggggtaagacttgattgttgttg 160  Q
    ||||   |||||||| |||||||||    
T  4415606 gtggaaaaagacttggttgttgttg 4415630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 18469235 - 18469103
Alignment:
Q  10 agatgaagacataggaaaattata-gaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtata 107  Q
    |||||||||| ||| ||||||||| || ||||  |||||||| ||||| ||||||||||||||||| |||||||| ||||||||  ||||||||||| ||    
T  18469235 agatgaagacttagaaaaattataagagaaacttttaggaaatattaagaggtcaatgagttggatacaaatatagtttatgatcgaacattatggtgta 18469136  T
Q  108 gtttgatccatatagtcgattccacttagtggg 140  Q
     |||| | ||| ||| |||  ||||||||||||    
T  18469135 atttggttcatgtagacgaccccacttagtggg 18469103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 75 - 170
Target Start/End: Original strand, 22175341 - 22175436
Alignment:
Q  75 caaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttgttgt 170  Q
    |||||||  ||||||||| |||||||||||| | |||||||||| ||| |||  |||||||||||| |||| |||| ||| |||||||||||||||    
T  22175341 caaatatggtttatgatagaacattatggtagaatttgatccatgtagccgaccccacttagtgggataaggcttggttggtgttgatgttgttgt 22175436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 41560412 - 41560510
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||||||||||||||||||||   |||||||| ||||||||||  || |||||||||| ||| |||  |||||||||||| |||| |||| |||||||||    
T  41560412 aatgagttggatccaaatatgggttatgatagaacattatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 41560510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 160
Target Start/End: Original strand, 1210878 - 1211026
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| ||| ||| |||||||||| || |||| | ||||||||||||||||||||||| |  | ||||||| |||| |||||  |  |||    
T  1210878 gaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcattt 1210977  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||||||| ||| |||  |||||||||||| |||| |||| |||||||||    
T  1210978 gatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 1211026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 160
Target Start/End: Complemental strand, 37311880 - 37311756
Alignment:
Q  37 aaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccactta 135  Q
    |||||||||| ||||||| | |||||||||||||||||||||||||  ||| ||||| |||| |||||  |  |||||||||| ||| |||  |||||||    
T  37311880 aaaccattagaaaagatttagaggtcaatgagttggatccaaatatggtttttgatagaacactatggcgtcatttgatccatgtagccgaccccactta 37311781  T
Q  136 gtggggtaagacttgattgttgttg 160  Q
    |||||  ||| |||| |||||||||    
T  37311780 gtgggaaaaggcttggttgttgttg 37311756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 160
Target Start/End: Complemental strand, 38807796 - 38807672
Alignment:
Q  37 aaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccactta 135  Q
    |||||||||| || |||| | ||||||| |||||||||||||||||  ||||||||| |||| |||||  || |||| ||||| ||| |||  |||||||    
T  38807796 aaaccattagaaaggatttagaggtcaacgagttggatccaaatatggtttatgatagaacactatggcgtaatttgttccatgtagccgaccccactta 38807697  T
Q  136 gtggggtaagacttgattgttgttg 160  Q
    ||||| |||| |||| |||||||||    
T  38807696 gtgggataaggcttggttgttgttg 38807672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 160
Target Start/End: Complemental strand, 49347542 - 49347394
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| ||| ||| |||||||||| || |||| | ||||||||||||||||||||||| |  | ||||||| |||| |||||  |  |||    
T  49347542 gaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcattt 49347443  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||||||| ||| |||  |||||||||||| |||| |||| |||||||||    
T  49347442 gatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 49347394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 160
Target Start/End: Original strand, 52921213 - 52921361
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| ||| ||| |||||||||| || |||| | |||||||||| ||||||||||||||  ||||||||| |||| ||| |  |  |||    
T  52921213 gaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgaattggatccaaatatggtttatgatagaacactattgcgtcattt 52921312  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||||||| ||| |||  |||||||||||| |||| |||| |||||||||    
T  52921313 gatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 52921361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 167
Target Start/End: Original strand, 51602189 - 51602344
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| ||| |||||||||||||| |  |||| | ||||||||||||||||||||||| |  | ||||||| ||||| ||||  |  |||    
T  51602189 gaagacctaggaaaactattagaaaaaccattagaagggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacatcatggcgtcattt 51602288  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttgt 167  Q
    ||||||| ||| | |  |||||||||||| |||| |||| ||||||||| ||||||    
T  51602289 gatccatgtagccaaccccacttagtgggataaggcttggttgttgttgttgttgt 51602344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 171
Target Start/End: Original strand, 6084158 - 6084267
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttga 161  Q
    ||||||||||||| ||||||  ||||||||| |||| |||||  || |||||||||| || | |||  ||||||||||| |||| |||| ||||| |||     
T  6084158 aatgagttggatcaaaatatggtttatgatagaacaatatggcgtaatttgatccatgtatttgatctcacttagtgggataaggcttggttgttattgt 6084257  T
Q  162 tgttgttgtt 171  Q
    ||||||||||    
T  6084258 tgttgttgtt 6084267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 167
Target Start/End: Complemental strand, 37430487 - 37430414
Alignment:
Q  94 aacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttgt 167  Q
    ||||||||||  ||||||||||||||||| |||| |||||||||| | |||| |||| ||||||||| ||||||    
T  37430487 aacattatggcgtagtttgatccatatagccgatcccacttagtgagataaggcttggttgttgttgttgttgt 37430414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 76 - 140
Target Start/End: Complemental strand, 2694504 - 2694440
Alignment:
Q  76 aaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggg 140  Q
    ||||||| ||||||||| ||||||||||||||||||||||||| |||  ||  ||||||||||||    
T  2694504 aaatatagtttatgatagaacattatggtatagtttgatccatttagcagaccccacttagtggg 2694440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 165
Target Start/End: Original strand, 15086100 - 15086208
Alignment:
Q  57 aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgtt 156  Q
    ||||||||||||||||||||||||| |||| ||||| |||| ||||   |  |||||||||| ||| | |  |||||||||||| |||| |||| |||||    
T  15086100 aggtcaatgagttggatccaaatatgatttttgatagaacactatgacgtcatttgatccatgtagccaaccccacttagtgggataaggcttggttgtt 15086199  T
Q  157 gttgatgtt 165  Q
    |||| ||||    
T  15086200 gttgttgtt 15086208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 166
Target Start/End: Original strand, 8672051 - 8672205
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| ||| ||| |||||||||| || |||| | ||||||||||||||||||||||| |  | ||||||| |||| ||| |  |  |||    
T  8672051 gaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatagcgtcattt 8672150  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttg 166  Q
    ||||||||||| | |  ||||||||| || |||| |||| ||||||||| |||||    
T  8672151 gatccatatagccaaccccacttagtaggataaggcttggttgttgttgttgttg 8672205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 160
Target Start/End: Complemental strand, 52561708 - 52561590
Alignment:
Q  43 ttaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtgggg 141  Q
    |||||||||||| | |||| ||||||||||||||||||||  |||  | || ||||||||||   | |||||||||| ||| |||  ||||||||||||     
T  52561708 ttaggaaagatttagaggttaatgagttggatccaaatatggtttcgggtagaacattatggcgaaatttgatccatgtagccgaccccacttagtggga 52561609  T
Q  142 taagacttgattgttgttg 160  Q
    |||| |||| |||||||||    
T  52561608 taaggcttggttgttgttg 52561590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 160
Target Start/End: Complemental strand, 10200404 - 10200307
Alignment:
Q  63 atgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    |||||||||||||||||||  ||||||||| ||||| ||||| || |||||||||| ||| |||   |||||| |||| |||  |||| |||||||||    
T  10200404 atgagttggatccaaatatggtttatgatagaacatcatggtgtaatttgatccatgtagccgacctcacttaatgggataatgcttggttgttgttg 10200307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 165
Target Start/End: Complemental strand, 39123445 - 39123365
Alignment:
Q  84 tttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgtt 165  Q
    ||||||||| ||||||||||| || |||||||||| ||| |||  || |||||||| |||||||| ||||||||||| ||||    
T  39123445 tttatgatagaacattatggtgtaatttgatccatgtagccga-cccccttagtggtgtaagactcgattgttgttgttgtt 39123365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 169
Target Start/End: Original strand, 50636266 - 50636371
Alignment:
Q  64 tgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttgatg 163  Q
    ||||||||||  ||||||  | ||||||| | |||||||  ||  ||||||| || |||||||||| |||||| ||| |||| |||||||||||||| ||    
T  50636266 tgagttggataaaaatatggtatatgatagagcattatgacatcatttgatcaatgtagtcgattctacttagcgggataaggcttgattgttgttgttg 50636365  T
Q  164 ttgttg 169  Q
    ||||||    
T  50636366 ttgttg 50636371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 160
Target Start/End: Original strand, 2544774 - 2544874
Alignment:
Q  60 tcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgtt 159  Q
    ||||||||||||| | ||||||  ||||| ||| |||||||||| ||| |||||||||| ||| |||  |||||||||||   ||| |||| ||||||||    
T  2544774 tcaatgagttggagcgaaatatggtttataatagaacattatggcataatttgatccatgtagccgaccccacttagtggtaaaaggcttggttgttgtt 2544873  T
Q  160 g 160  Q
    |    
T  2544874 g 2544874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 160
Target Start/End: Original strand, 22090229 - 22090377
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| ||| ||| |||||||||| || |||| | ||||||||||||||||||||||| |  | ||||||| |||| ||||   |  |||    
T  22090229 gaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatgacgtcattt 22090328  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||||||| ||| |||  ||||| |||||| |||| |||| |||||||||    
T  22090329 gatccatgtagccgaccccactaagtgggataaggcttggttgttgttg 22090377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 27520306 - 27520242
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcga 126  Q
    |||||| ||||||||||||| |||||||||| ||||||||| | || |||||| ||| |||||||    
T  27520306 aatgagctggatccaaatatgatttatgatagaacattatgatgtaatttgattcatgtagtcga 27520242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 57 - 160
Target Start/End: Complemental strand, 4707324 - 4707222
Alignment:
Q  57 aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgtt 156  Q
    |||| |||||||||||||||||| |  ||||||||| |||| |||||  || |||||| ||| ||| |||  |||||||||||| |||| |||| |||||    
T  4707324 aggttaatgagttggatccaaatttggtttatgatagaacactatggcgtaatttgat-catgtagccgaccccacttagtgggataaggcttggttgtt 4707226  T
Q  157 gttg 160  Q
    ||||    
T  4707225 gttg 4707222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 57 - 160
Target Start/End: Complemental strand, 24020371 - 24020268
Alignment:
Q  57 aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgtt 156  Q
    ||||||||||||||||||||||| | |||||||||| |||| |||||  |  ||||||||||  || | |  |||||| ||||| |||| |||| |||||    
T  24020371 aggtcaatgagttggatccaaatttgatttatgatagaacactatggcgtcatttgatccatgcagccaaccccactttgtgggataaggcttggttgtt 24020272  T
Q  157 gttg 160  Q
    ||||    
T  24020271 gttg 24020268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 145
Target Start/End: Original strand, 40416554 - 40416637
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaag 145  Q
    ||||||||||||| ||||||  ||||||||| ||||||||||| || | |||||| | ||| |||  |||||||||||| ||||    
T  40416554 aatgagttggatcgaaatatggtttatgatagaacattatggtgtaatgtgatccctttagccgaccccacttagtgggttaag 40416637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 8796392 - 8796490
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||||| ||||||  ||||||  ||||||||| ||||||||||  || ||| |||||| ||| |||  |||||||||||| |||| |||| |||||||||    
T  8796392 aatgacttggattgaaatatggtttatgatagaacattatggcgtaatttaatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 8796490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 156
Target Start/End: Complemental strand, 19908134 - 19908040
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgtt 156  Q
    |||||||||||| |||||||  ||||||||  |||||||| |  || ||| |||||| ||| |||  |||||||||||| |||| ||||||||||    
T  19908134 aatgagttggattcaaatatggtttatgattgaacattattgcgtaattttatccatgtagccgaccccacttagtgggataaggcttgattgtt 19908040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 118
Target Start/End: Complemental strand, 32231103 - 32230997
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| ||| ||| |||||||||| || |||| | ||||||||||||||||||||||  |  | ||||||| |||| |||||| || |||    
T  32231103 gaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagttggatccaaagttggtctatgatagaacactatggtgtaattt 32231004  T
Q  112 gatccat 118  Q
    |||||||    
T  32231003 gatccat 32230997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 159
Target Start/End: Complemental strand, 37462979 - 37462878
Alignment:
Q  57 aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgtt 156  Q
    |||| |||||||| |||| ||||||  ||||| ||| ||||||||||  || |||||||||| ||| |||  |||||||||||| |||| |||| |||||    
T  37462979 aggttaatgagtttgatc-aaatatggtttatcatagaacattatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgtt 37462881  T
Q  157 gtt 159  Q
    |||    
T  37462880 gtt 37462878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 48431498 - 48431400
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||||||||||||||||||||  ||| ||||||||||| ||||  || |||||||| | |||  ||  ||||||||| || |||| |||| |||||||||    
T  48431498 aatgagttggatccaaatatggtttgtgataaaacatcatggcttaatttgatccttgtagctgaccccacttagtaggataaggcttggttgttgttg 48431400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 171
Target Start/End: Original strand, 5338896 - 5339005
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttga 161  Q
    ||||||||||||| |||| | |||||| ||| ||||||||||  || |||||||||| ||| | |   ||||||||| | |||| || | |||||||||     
T  5338896 aatgagttggatcgaaatgtgatttattatagaacattatggcgtaatttgatccatgtagccaacctcacttagtgagataaggctcggttgttgttgt 5338995  T
Q  162 tgttgttgtt 171  Q
    ||||||||||    
T  5338996 tgttgttgtt 5339005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 64 - 165
Target Start/End: Complemental strand, 11941677 - 11941576
Alignment:
Q  64 tgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttgatg 163  Q
    |||||||||||  | |||  ||||||||||||||||||||  || |||||||||| ||||||    ||||||||||| || | |||| ||||||||| ||    
T  11941677 tgagttggatcggagtatggtttatgataaaacattatggcgtattttgatccatgtagtcggcctcacttagtgggatacggcttggttgttgttgttg 11941578  T
Q  164 tt 165  Q
    ||    
T  11941577 tt 11941576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 160
Target Start/End: Original strand, 29128940 - 29129065
Alignment:
Q  37 aaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgat-ccatatagtcgattccactt 134  Q
    |||| ||||||||||||| | |||| ||  ||||||||||||||||  ||||||||| ||||||||||| || | |||| |||| ||| |||  ||||||    
T  29128940 aaactattaggaaagatttagaggttaacaagttggatccaaatatggtttatgatagaacattatggtgtaatatgatcccatgtagccgaccccactt 29129039  T
Q  135 agtggggtaagacttgattgttgttg 160  Q
    |||| | |||| |||| || ||||||    
T  29129040 agtgagataaggcttggtttttgttg 29129065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 169
Target Start/End: Complemental strand, 41017293 - 41017209
Alignment:
Q  84 tttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttgttg 169  Q
    ||||||||| |||||||| | ||| |||| || || ||| ||| ||||||||||||  ||||||||| ||||||||| ||||||||    
T  41017293 tttatgatagaacattatagcataatttggtcgatgtag-cgactccacttagtggaataagacttggttgttgttgttgttgttg 41017209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 169
Target Start/End: Complemental strand, 44941853 - 44941768
Alignment:
Q  84 tttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttgttg 169  Q
    ||||||||| |||| |||||  || |||||||||| ||| |||  |||||||||||| |||| |||| ||||||||| || |||||    
T  44941853 tttatgatagaacactatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgctgttg 44941768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 160
Target Start/End: Complemental strand, 4001580 - 4001456
Alignment:
Q  37 aaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccactta 135  Q
    |||||||||  ||||||| | |||||||||||||||||||||||||  ||| ||||| |||  ||||  ||  |||||||||| ||| | |  |||||||    
T  4001580 aaaccattaaaaaagatttagaggtcaatgagttggatccaaatatggtttttgatagaaccctatgacatcatttgatccatgtagccaaccccactta 4001481  T
Q  136 gtggggtaagacttgattgttgttg 160  Q
    |||||  ||| |||| |||||||||    
T  4001480 gtgggaaaaggcttggttgttgttg 4001456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 169
Target Start/End: Original strand, 6025835 - 6025895
Alignment:
Q  109 tttgatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttgttg 169  Q
    |||||||||| ||| ||||||||||||||||| ||| ||||| ||||| ||| || |||||    
T  6025835 tttgatccatgtagccgattccacttagtgggataatacttggttgtttttgttggtgttg 6025895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 26113516 - 26113440
Alignment:
Q  84 tttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||||||||| ||||||||||  || |||||||||| ||| |||   ||||||||||| |||||||  ||||||||||    
T  26113516 tttatgatagaacattatggcttaatttgatccatgtagccgagctcacttagtgggataagactacattgttgttg 26113440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 160
Target Start/End: Complemental strand, 40568511 - 40568411
Alignment:
Q  60 tcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgtt 159  Q
    ||||||||||||| | ||||||  ||||||||| || | |||||  || |||||||||| ||| | |  |||||||||||| |||| |||| ||||||||    
T  40568511 tcaatgagttggaccaaaatatggtttatgatagaaaactatggcgtaatttgatccatgtagccaaccccacttagtgggataaggcttggttgttgtt 40568412  T
Q  160 g 160  Q
    |    
T  40568411 g 40568411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 140
Target Start/End: Original strand, 50846759 - 50846823
Alignment:
Q  76 aaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggg 140  Q
    ||||||| ||||||||| |||||||||| ||| ||||||| || ||| |||  ||||||||||||    
T  50846759 aaatatagtttatgatagaacattatggcataatttgatctatgtagccgacaccacttagtggg 50846823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 158
Target Start/End: Complemental strand, 52532715 - 52532619
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgt 158  Q
    ||||||||||| | ||||||  ||||||||| ||||||||||  || |||||| ||| ||| |||  ||||||||||||  ||| |||| |||||||    
T  52532715 aatgagttggaacaaaatatggtttatgatagaacattatggcgtaatttgattcatgtagccgaccccacttagtgggaaaaggcttggttgttgt 52532619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 2e-21; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 165
Target Start/End: Original strand, 32756055 - 32756207
Alignment:
Q  15 aagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttg 112  Q
    ||||| |||||||| ||| ||| |||||||||| ||||||| | ||||||||||||||||||||||| |  | ||||||| |||| |||||  |  ||||    
T  32756055 aagacctaggaaaactattagagaaaccattagaaaagatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttg 32756154  T
Q  113 atccatatagtcgattccacttagtggggtaagacttgattgttgttgatgtt 165  Q
    |||||| ||| |||| ||||||||||||||||||||||  |||||||| ||||    
T  32756155 atccatgtagccgatcccacttagtggggtaagacttggatgttgttgttgtt 32756207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 160
Target Start/End: Original strand, 12890704 - 12890856
Alignment:
Q  10 agatgaagacataggaaaattata-gaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtata 107  Q
    |||||||||| |||||||| |||| || |||||||||| || |||| | | ||||||||||| |||||||||||  ||||||||| |||| |||||  ||    
T  12890704 agatgaagacctaggaaaactataagagaaaccattagaaaggatttagacgtcaatgagttagatccaaatatggtttatgatagaacactatggcgta 12890803  T
Q  108 gtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
     |||||||||| ||| |||  |||||||||||| |||| |||| |||||||||    
T  12890804 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 12890856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 167
Target Start/End: Original strand, 28085509 - 28085664
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| ||| ||| |||||||||| || |||| | ||||||||||||||||||||||| |  | ||||||| |||| |||||| |  |||    
T  28085509 gaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggtgtcattt 28085608  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttgt 167  Q
    ||||||| ||| |||  |||||||||||| |||| |||| ||||||||| ||||||    
T  28085609 gatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgt 28085664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 37 - 165
Target Start/End: Complemental strand, 34630 - 34501
Alignment:
Q  37 aaaccattaggaaagat-taaaggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccactta 135  Q
    ||||||||| ||||||| ||||| | ||||||||||||  ||||||  ||||||||| ||||||||||  || |||||||||| |||  ||  |||||||    
T  34630 aaaccattaagaaagatctaaagattaatgagttggattgaaatatggtttatgatagaacattatggcgtaatttgatccatgtagctgaccccactta 34531  T
Q  136 gtggggtaagacttgattgttgttgatgtt 165  Q
    ||||| ||||||||| ||||||||| ||||    
T  34530 gtgggataagacttggttgttgttgttgtt 34501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 160
Target Start/End: Original strand, 9706922 - 9707051
Alignment:
Q  32 tagaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattcc 130  Q
    |||| ||||| ||||||| |||| | |||| ||||||||||||||||||||  ||| ||||| |||| ||||| ||  |||||||||| ||| |||  ||    
T  9706922 tagataaaccgttaggaaggatttagaggttaatgagttggatccaaatatggtttttgatagaacactatggcatcatttgatccatgtagccgacccc 9707021  T
Q  131 acttagtggggtaagacttgattgttgttg 160  Q
    |||||||||| |||| |||| |||||||||    
T  9707022 acttagtgggataaggcttggttgttgttg 9707051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 33497133 - 33497201
Alignment:
Q  53 ttaaaggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatata 121  Q
    ||||||||||||||||||||||||||||| |||||||||| |||| ||| |  || |||||||||||||    
T  33497133 ttaaaggtcaatgagttggatccaaatatgatttatgatataacactatagcgtaatttgatccatata 33497201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 167
Target Start/End: Complemental strand, 34143914 - 34143759
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| ||| ||| |||||||||  || |||| | ||||||||||||||||||||||| |  | ||||||| |||| |||||  |  |||    
T  34143914 gaagacctaggaaaactattagagaaaccattacaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcattt 34143815  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttgt 167  Q
    ||||||| |||||||  ||||||| |||| |||| |||| ||||||||| ||||||    
T  34143814 gatccatgtagtcgaccccacttattgggataaggcttggttgttgttgttgttgt 34143759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 167
Target Start/End: Complemental strand, 34156530 - 34156375
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| ||| ||| |||||||||  || |||| | ||||||||||||||||||||||| |  | ||||||| |||| |||||  |  |||    
T  34156530 gaagacctaggaaaactattagagaaaccattacaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcattt 34156431  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttgt 167  Q
    ||||||| |||||||  ||||||| |||| |||| |||| ||||||||| ||||||    
T  34156430 gatccatgtagtcgaccccacttattgggataaggcttggttgttgttgttgttgt 34156375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 5096017 - 5096115
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||||||||||||| ||||||  ||||||||| ||||||||||  || ||||||| || ||| |||| |||||||||||| ||||  ||| |||||||||    
T  5096017 aatgagttggatcaaaatatggtttatgatagaacattatggcgtaatttgatctatgtagccgatcccacttagtgggataaggtttggttgttgttg 5096115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 166
Target Start/End: Complemental strand, 3206563 - 3206454
Alignment:
Q  57 aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgtt 156  Q
    |||||||||||||||||||||||||  ||| | ||| |||| |||||  |  |||||||||| ||| |||  |||||||||||| ||||||||| || ||    
T  3206563 aggtcaatgagttggatccaaatatggtttttaatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataagacttggttatt 3206464  T
Q  157 gttgatgttg 166  Q
    |||| |||||    
T  3206463 gttgttgttg 3206454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 160
Target Start/End: Complemental strand, 9593857 - 9593711
Alignment:
Q  14 gaagacataggaaaattata-gaaaaaccattaggaaaga-ttaaaggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| ||| ||||||||| || |||| ||||||||||| ||| || | |||||||||||||| |||||  ||||||||| ||||||||||  || |||    
T  9593857 gaagacctagaaaaattataagagaaactattaggaaagacttagagattaatgagttggatcccaatatggtttatgatagaacattatgg--taattt 9593760  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    |||||||||||  ||   ||||||||||  |||| |||| |||||||||    
T  9593759 gatccatatagctgaccacacttagtggcataaggcttggttgttgttg 9593711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 160
Target Start/End: Complemental strand, 34934934 - 34934831
Alignment:
Q  57 aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgtt 156  Q
    ||||||||||||||||||||||| |  | ||||||| |||| |||||  |  |||||||||| ||| |||  |||||||||||| |||| |||| |||||    
T  34934934 aggtcaatgagttggatccaaatttggtgtatgatagaacactatggcctcatttgatccatgtagccgaccccacttagtgggataaggcttggttgtt 34934835  T
Q  157 gttg 160  Q
    ||||    
T  34934834 gttg 34934831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 109 - 167
Target Start/End: Complemental strand, 10098948 - 10098890
Alignment:
Q  109 tttgatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttgt 167  Q
    |||||||||| || ||||  |||||||||||| ||||||||||||||||||| ||||||    
T  10098948 tttgatccatgtaatcgaccccacttagtgggataagacttgattgttgttgttgttgt 10098890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 158
Target Start/End: Original strand, 30031434 - 30031535
Alignment:
Q  57 aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgtt 156  Q
    |||||||||||||||||  ||||||  ||||||||| |||| |||||  || |||||||||| ||| |||   ||||||||||| |||| |||| |||||    
T  30031434 aggtcaatgagttggatttaaatatggtttatgatagaacactatggcgtaatttgatccatgtagccgacctcacttagtgggataaggcttggttgtt 30031533  T
Q  157 gt 158  Q
    ||    
T  30031534 gt 30031535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 102
Target Start/End: Complemental strand, 21351968 - 21351896
Alignment:
Q  31 atagaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatg 102  Q
    ||||| |||||||||| ||||||| | ||||||||||| ||||||||||||| |||| ||||| |||| ||||    
T  21351968 atagagaaaccattagaaaagatttagaggtcaatgagctggatccaaatatgatttttgatagaacactatg 21351896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 140
Target Start/End: Original strand, 32080655 - 32080730
Alignment:
Q  65 gagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggg 140  Q
    |||||||||  || ||| |||||||||| ||||||||||  || |||||| ||| |||||||| ||||||||||||    
T  32080655 gagttggattaaattatgatttatgatataacattatggcgtaatttgatacatgtagtcgatcccacttagtggg 32080730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 167
Target Start/End: Complemental strand, 5258252 - 5258142
Alignment:
Q  57 aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgtt 156  Q
    ||||||||||| | |||||||||||  ||| |||| ||||| |||||  |  |||||||||  ||| |||  |||||||||||| |||| |||| |||||    
T  5258252 aggtcaatgagctagatccaaatatggtttttgattaaacactatggcgtcatttgatccacgtagccgaccccacttagtgggataagtcttggttgtt 5258153  T
Q  157 gttgatgttgt 167  Q
    |||| ||||||    
T  5258152 gttgttgttgt 5258142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 102
Target Start/End: Original strand, 5631979 - 5632045
Alignment:
Q  37 aaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatg 102  Q
    |||||||||| ||||||| | |||||||||||||||||||||||||  ||| ||||| |||| ||||    
T  5631979 aaaccattagaaaagatttagaggtcaatgagttggatccaaatatggtttttgatataacactatg 5632045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 57 - 102
Target Start/End: Original strand, 24665989 - 24666034
Alignment:
Q  57 aggtcaatgagttggatccaaatataatttatgataaaacattatg 102  Q
    |||||||||||||||||| ||||||  ||||||||| |||||||||    
T  24665989 aggtcaatgagttggatcgaaatatggtttatgatagaacattatg 24666034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 3210607 - 3210551
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccat 118  Q
    ||||||||||||  |||||| | |||||||| ||||||||||| || ||||||||||    
T  3210607 aatgagttggatggaaatatgagttatgatagaacattatggtgtaatttgatccat 3210551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 97
Target Start/End: Original strand, 5081018 - 5081058
Alignment:
Q  57 aggtcaatgagttggatccaaatataatttatgataaaaca 97  Q
    ||||||||||||||||| ||||||| |||||||||| ||||    
T  5081018 aggtcaatgagttggatacaaatatgatttatgatagaaca 5081058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 140
Target Start/End: Original strand, 32097934 - 32097998
Alignment:
Q  76 aaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggg 140  Q
    |||||| |||||||||| ||||||||||  ||  ||||| ||| ||| |||||||||||||||||    
T  32097934 aaatatgatttatgatataacattatggcgtaaattgatacatgtagccgattccacttagtggg 32097998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 167
Target Start/End: Original strand, 34939284 - 34939388
Alignment:
Q  64 tgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcga-ttccacttagtggggtaagacttgattgttgttgat 162  Q
    ||||||||||| ||||||  |||||||||  | |||||||| || |||||||||||||| |||   |||||||||||  ||| || |||||||| ||| |    
T  34939284 tgagttggatcgaaatatggtttatgatatgatattatggtgtaatttgatccatatagccgacccccacttagtggcataaaacatgattgttcttgtt 34939383  T
Q  163 gttgt 167  Q
    |||||    
T  34939384 gttgt 34939388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 2e-21; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 45 - 160
Target Start/End: Original strand, 54128544 - 54128660
Alignment:
Q  45 aggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggta 143  Q
    |||||||||| | |||||||||||||||| ||||||||  ||||||||| |||||||||| ||| |||||||||| ||| |||  |||||||||||| ||    
T  54128544 aggaaagatttagaggtcaatgagttggacccaaatatggtttatgatagaacattatggcataatttgatccatgtaggcgaccccacttagtgggata 54128643  T
Q  144 agacttgattgttgttg 160  Q
    || |||| |||||||||    
T  54128644 aggcttggttgttgttg 54128660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 14 - 175
Target Start/End: Complemental strand, 12096854 - 12096691
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| ||| |||||||||||||| || |||| | ||||||||||||||||||||||| |  | ||||||| |||| |||||  |  |||    
T  12096854 gaagacctaggaaaactattagaaaaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcattt 12096755  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttgttgttttca 175  Q
    ||||||| ||| |||  |||||||||||| |||| |||| ||||||||| ||||||||| ||||    
T  12096754 gatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgttgtattca 12096691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 14 - 167
Target Start/End: Original strand, 48508368 - 48508523
Alignment:
Q  14 gaagacataggaaaattata-gaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| |||| || |||||||||| || |||| | ||||||||||||||||| |||||||  ||||||||| |||| |||||  || |||    
T  48508368 gaagacctaggaaaactataagagaaaccattagaaaggatttagaggtcaatgagttggattcaaatatggtttatgatagaacactatggcgtaattt 48508467  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttgt 167  Q
    ||||||| ||| |||  |||||||||||| |||| |||| ||||||||| ||||||    
T  48508468 gatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgt 48508523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 167
Target Start/End: Original strand, 5168984 - 5169120
Alignment:
Q  32 tagaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattcc 130  Q
    |||| |||||||||| || |||| | |||||||||||||||||||||||||  ||| ||||| |||| |||||  |  |||||||||| ||| |||  ||    
T  5168984 tagagaaaccattagaaaggatttataggtcaatgagttggatccaaatatggtttttgatagaacactatggcgtcatttgatccatgtagccgacccc 5169083  T
Q  131 acttagtggggtaagacttgattgttgttgatgttgt 167  Q
    |||||||||| |||| |||| ||||||||| ||||||    
T  5169084 acttagtgggataaggcttggttgttgttgttgttgt 5169120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 37 - 160
Target Start/End: Original strand, 15296064 - 15296188
Alignment:
Q  37 aaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccactta 135  Q
    |||| ||||||||||||| | |||| ||||| |||||||||||||| ||||  |||| ||||||||||| || |||||||||| | | |||  |||||||    
T  15296064 aaactattaggaaagatttagaggttaatgaattggatccaaatatgatttcggatagaacattatggtgtaatttgatccatgtggccgaccccactta 15296163  T
Q  136 gtggggtaagacttgattgttgttg 160  Q
    ||||| |||| |||| |||||||||    
T  15296164 gtgggataaggcttggttgttgttg 15296188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 57 - 160
Target Start/End: Complemental strand, 2133716 - 2133613
Alignment:
Q  57 aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgtt 156  Q
    |||||||||||||| ||||||||||| ||||||||| |||| |||||  |  |||||||||| || ||||  |||||||||||| |||| |||| |||||    
T  2133716 aggtcaatgagttgaatccaaatatagtttatgatagaacactatggcgtgatttgatccatgtactcgaccccacttagtgggataaggcttggttgtt 2133617  T
Q  157 gttg 160  Q
    ||||    
T  2133616 gttg 2133613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 150
Target Start/End: Original strand, 19737136 - 19737254
Alignment:
Q  32 tagaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattcc 130  Q
    ||||||||| ||||||||| ||| | || | |||||||||||||  |||||  |||||||||||||||||||||||| |||||||||| ||| |||  ||    
T  19737136 tagaaaaactattaggaaatatttagagattaatgagttggatctcaatatggtttatgataaaacattatggtataatttgatccatgtag-cgacccc 19737234  T
Q  131 acttagtggggtaagacttg 150  Q
    |||||||||| |||| ||||    
T  19737235 acttagtgggataaggcttg 19737254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 40106719 - 40106621
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||||||||||||||||||||  ||||||||| |||||||||  ||| ||||||| || |||| ||  |||||||||||| |||| |||| |||||||||    
T  40106719 aatgagttggatccaaatatggtttatgatagaacattatgacataatttgatcaatgtagtggaccccacttagtgggataaggcttggttgttgttg 40106621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 170
Target Start/End: Original strand, 53262298 - 53262432
Alignment:
Q  37 aaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccactta 135  Q
    |||||||||| | ||||| | |||||||||||||||||||||||||  ||| ||||| |||| |||||  |  ||||||| || ||| |||  |||||||    
T  53262298 aaaccattagaagagatttagaggtcaatgagttggatccaaatatggtttttgatagaacactatggcgtcatttgatctatgtagccgaccccactta 53262397  T
Q  136 gtggggtaagacttgattgttgttgatgttgttgt 170  Q
    ||||| |||| |||| ||||||||| |||||||||    
T  53262398 gtgggataaggcttggttgttgttgttgttgttgt 53262432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 160
Target Start/End: Original strand, 38060894 - 38060995
Alignment:
Q  59 gtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgt 158  Q
    |||||||||||||||||||||||  ||||||||| ||||  ||||  || |||||||||| ||| |||  |||||||||||| ||||| ||| |||||||    
T  38060894 gtcaatgagttggatccaaatatggtttatgatagaacaccatggcgtaatttgatccatgtagccgaccccacttagtgggataagaattggttgttgt 38060993  T
Q  159 tg 160  Q
    ||    
T  38060994 tg 38060995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 160
Target Start/End: Complemental strand, 45289216 - 45289092
Alignment:
Q  37 aaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccactta 135  Q
    |||| ||||||||||||| | || | ||||||||||||||||||||  ||||||||| |||||||| | ||| |||||||||| | | | |  |||||||    
T  45289216 aaactattaggaaagatttagagattaatgagttggatccaaatatggtttatgatagaacattatagcataatttgatccatgtcgccaaccccactta 45289117  T
Q  136 gtggggtaagacttgattgttgttg 160  Q
    ||||| |||| |||| |||||||||    
T  45289116 gtgggataaggcttggttgttgttg 45289092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 150
Target Start/End: Original strand, 19758039 - 19758157
Alignment:
Q  32 tagaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattcc 130  Q
    ||||||||| ||||||||| ||| | || | |||||||||||||  |||||  ||||||||| |||||||||||||| |||||||||| ||| |||  ||    
T  19758039 tagaaaaactattaggaaatatttagagattaatgagttggatctcaatatggtttatgatagaacattatggtataatttgatccatgtag-cgacccc 19758137  T
Q  131 acttagtggggtaagacttg 150  Q
    |||||||||| |||| ||||    
T  19758138 acttagtgggataaggcttg 19758157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 160
Target Start/End: Complemental strand, 48734255 - 48734148
Alignment:
Q  53 ttaaaggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgat 152  Q
    ||||||||||| ||||||| |||||| ||  ||||||||| ||||||||||  ||  ||||||||| |||  ||  |||||||||||| |||| ||||||    
T  48734255 ttaaaggtcaacgagttgggtccaaacatggtttatgatagaacattatggcgtaagttgatccatgtagctgaccccacttagtgggataaggcttgat 48734156  T
Q  153 tgttgttg 160  Q
    ||||||||    
T  48734155 tgttgttg 48734148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 14415358 - 14415261
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||||||||||| ||| ||||  ||||||||| |||||||||| ||| |||||| ||| ||| |||  |||||||||||| ||||||||| |||||||||    
T  14415358 aatgagttggacccacatatggtttatgatataacattatggcataatttgat-catgtagccgaccccacttagtgggataagacttggttgttgttg 14415261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 26490498 - 26490596
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    |||||||| ||||||||| | ||||   ||| || |||||||  || ||||||||||||||||||| |||||||||  | |||||||||||||||||||    
T  26490498 aatgagtttgatccaaatgtgatttcatatagaatattatggcgtaatttgatccatatagtcgatcccacttagtaagataagacttgattgttgttg 26490596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 168
Target Start/End: Original strand, 22224 - 22361
Alignment:
Q  32 tagaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattcc 130  Q
    |||| |||||||||| || |||| | |||||||||||||||||||||||||  ||| ||||| |||| |||||  |  ||||||| || ||| |||  ||    
T  22224 tagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatatggtttttgatagaacactatggcgtcatttgatctatgtagccgacccc 22323  T
Q  131 acttagtggggtaagacttgattgttgttgatgttgtt 168  Q
    |||||||||| |||  |||| ||||||||| |||||||    
T  22324 acttagtgggataaagcttggttgttgttgttgttgtt 22361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 170
Target Start/End: Complemental strand, 47555436 - 47555323
Alignment:
Q  57 aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgtt 156  Q
    ||||||||||||||||||||||| |  | ||||||| |||| |||||  |  |||||||||| ||| | |  |||||||||||| |||| |||| |||||    
T  47555436 aggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccaaccccacttagtgggataaggcttggttgtt 47555337  T
Q  157 gttgatgttgttgt 170  Q
    |||| |||||||||    
T  47555336 gttgttgttgttgt 47555323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 48953526 - 48953478
Alignment:
Q  54 taaaggtcaatgagttggatccaaatataatttatgataaaacattatg 102  Q
    |||||||||||||||||||||||||||| |||||||||| |||| ||||    
T  48953526 taaaggtcaatgagttggatccaaatatgatttatgatagaacactatg 48953478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 160
Target Start/End: Original strand, 52138933 - 52139081
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| ||| ||| |||||||||| || |||| | ||||||||||||||||||||||| |  | ||||||| |||| ||||   |  |||    
T  52138933 gaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatgacgttattt 52139032  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||||||| ||| |||  |||||||||||| |||| |||| |||||||||    
T  52139033 gatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 52139081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 160
Target Start/End: Complemental strand, 52156188 - 52156085
Alignment:
Q  57 aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgtt 156  Q
    |||||||||||||||||||||||||  ||||||||| |||| |||||  |  | |||||||| ||| |||  |||||||||||| |||| || | |||||    
T  52156188 aggtcaatgagttggatccaaatatggtttatgatagaacactatggcgtcatctgatccatgtagccgaccccacttagtgggataaggctcggttgtt 52156089  T
Q  157 gttg 160  Q
    ||||    
T  52156088 gttg 52156085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 140
Target Start/End: Original strand, 29601075 - 29601153
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggg 140  Q
    |||||||||||| |||||||| ||||||||| ||||||||| | || |||||||||| |||  ||  ||||||||||||    
T  29601075 aatgagttggattcaaatatagtttatgatagaacattatgatgtaatttgatccatgtagctgaccccacttagtggg 29601153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 40991614 - 40991712
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||||||||||| | ||||||  ||||||||| ||||||||||| || |||||||||| |||  ||  |||||||||| | |||||||||  ||||||||    
T  40991614 aatgagttggaccaaaatatggtttatgatagaacattatggtgtaatttgatccatgtagctgaccccacttagtgagataagacttggctgttgttg 40991712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 73 - 171
Target Start/End: Complemental strand, 52927936 - 52927838
Alignment:
Q  73 tccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttgttgtt 171  Q
    |||||||||  |||| || | |||||||||| ||| |||||||||| ||| |||  |||||||||||| |||| |||| |||||| || ||||||||||    
T  52927936 tccaaatatggtttacgacagaacattatggcataatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgatgttgttgttgtt 52927838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 86 - 159
Target Start/End: Original strand, 659732 - 659805
Alignment:
Q  86 tatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgtt 159  Q
    ||||||| |||||||||| |  ||||||||||| ||| |||  ||||||||||||||||| |||| ||||||||    
T  659732 tatgatagaacattatggcagtgtttgatccatgtagccgaccccacttagtggggtaaggcttggttgttgtt 659805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 171
Target Start/End: Original strand, 39208791 - 39208900
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttga 161  Q
    ||||||| ||||||||||||  ||||||||| |||||||||   || |||||||||| |||  ||  ||| |||||||| || | |||| |||||||||     
T  39208791 aatgagtaggatccaaatatggtttatgatagaacattatgacgtaatttgatccatgtagaggaccccagttagtgggatatggcttggttgttgttgt 39208890  T
Q  162 tgttgttgtt 171  Q
    ||||||||||    
T  39208891 tgttgttgtt 39208900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 160
Target Start/End: Complemental strand, 48712173 - 48712076
Alignment:
Q  63 atgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||||||||||| |||||||  ||||||||| |||||||||  ||  ||| |||||| |||| ||| |||||||||||| |||  |||| |||||||||    
T  48712173 atgagttggattcaaatatggtttatgatataacattatgacattatttcatccatgtagttgatcccacttagtgggataatgcttggttgttgttg 48712076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 160
Target Start/End: Original strand, 49042093 - 49042218
Alignment:
Q  37 aaaccattaggaaagattaa-aggtcaatgagttggatccaaatat-aatttatgataaaacattatggtatagtttgatccatatagtcgattccactt 134  Q
    |||| ||||||||||||| | |||| ||||||||||||||||||||   ||||||||| |||| |||||  || |||||||||| ||| |||  ||||||    
T  49042093 aaactattaggaaagatttagaggttaatgagttggatccaaatatggttttatgatagaacactatggcgtaatttgatccatgtagccgaccccactt 49042192  T
Q  135 agtggggtaagacttgattgttgttg 160  Q
     ||| | |||| |||| |||||||||    
T  49042193 ggtgagataaggcttggttgttgttg 49042218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 165
Target Start/End: Original strand, 31146906 - 31146985
Alignment:
Q  85 ttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgtt 165  Q
    |||||||||||||| ||||| || |||||||||| ||| ||| ||||||||||||| |||| || | ||||||||| ||||    
T  31146906 ttatgataaaacat-atggtgtaatttgatccatgtagccgactccacttagtgggataaggctcggttgttgttgttgtt 31146985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 160
Target Start/End: Original strand, 35033303 - 35033427
Alignment:
Q  37 aaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccactta 135  Q
    |||||||||| ||||||| | |||||||||||||||||||||||||  ||| ||||| |||| |||||  |  |||||||||| ||| |||   ||  ||    
T  35033303 aaaccattagaaaagatttagaggtcaatgagttggatccaaatatggtttttgatagaacactatggcgttatttgatccatgtagccgacctcatcta 35033402  T
Q  136 gtggggtaagacttgattgttgttg 160  Q
    ||||| |||| |||| |||||||||    
T  35033403 gtgggataaggcttggttgttgttg 35033427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 168
Target Start/End: Original strand, 7942864 - 7942943
Alignment:
Q  89 gataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttgtt 168  Q
    |||| ||||||||||| | ||| ||||||| |||||||| |||||||||||| |||| ||| | | |||||| |||||||    
T  7942864 gatagaacattatggtgttgttcgatccatgtagtcgataccacttagtgggataaggcttaacttttgttgctgttgtt 7942943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 159
Target Start/End: Complemental strand, 39600806 - 39600683
Alignment:
Q  37 aaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccactta 135  Q
    |||| |||| |||||||| | |||| |||||||||||||||||| |  |||| |||| ||||||||||| || |||||||||| ||  | |  ||||||     
T  39600806 aaactattaagaaagatttagaggttaatgagttggatccaaatctggtttacgatagaacattatggtgtaatttgatccatctaaccaaccccacttt 39600707  T
Q  136 gtggggtaagacttgattgttgtt 159  Q
    ||||| ||||||||| || |||||    
T  39600706 gtgggataagacttggtttttgtt 39600683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 157
Target Start/End: Complemental strand, 50960736 - 50960641
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttg 157  Q
    ||||||||||||||||||||  | ||| ||| | ||||||||| || |||||||||| ||| | |  |||||||||||| |||| |||| ||||||    
T  50960736 aatgagttggatccaaatatggtgtatcatagaccattatggtgtaatttgatccatttagccaaccccacttagtgggataaggcttggttgttg 50960641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 167
Target Start/End: Complemental strand, 311413 - 311303
Alignment:
Q  57 aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgtt 156  Q
    |||||||| ||||||||||| ||||  ||| ||||| |||| |||||  |  |||||| ||| ||| |||  |||||||||||| |||| |||| |||||    
T  311413 aggtcaattagttggatccagatatggtttttgatagaacactatggcgtcatttgatacatgtagccgaccccacttagtgggataaggcttggttgtt 311314  T
Q  157 gttgatgttgt 167  Q
    |||| ||||||    
T  311313 gttgttgttgt 311303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 30294225 - 30294179
Alignment:
Q  57 aggtcaatgagttggatccaaatataatttatgataaaacattatgg 103  Q
    |||||||||||||||||| || ||| ||||||||||||||| |||||    
T  30294225 aggtcaatgagttggatctaagtatgatttatgataaaacactatgg 30294179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 170
Target Start/End: Original strand, 54279153 - 54279310
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| ||| ||| |||||||||| || |||| | ||||||||||||||||||||||| |  | ||||||| |||| |||||  |  |||    
T  54279153 gaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcattt 54279252  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttgttgt 170  Q
    |||| || ||| |||| ||||||| |  | ||||||||| || |||||| |||||||||    
T  54279253 gatcaatgtagccgatcccacttaataagataagacttggtt-ttgttgttgttgttgt 54279310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 41230547 - 41230506
Alignment:
Q  129 ccacttagtggggtaagacttgattgttgttgatgttgttgt 170  Q
    |||||||||||| |||| |||||||||||||| |||||||||    
T  41230547 ccacttagtgggataaggcttgattgttgttgttgttgttgt 41230506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 17022781 - 17022729
Alignment:
Q  52 attaaaggtcaatgagttggatccaaatataatttatgataaaacattatggt 104  Q
    |||| ||||||||||||||||||||| | || ||||||||| || ||||||||    
T  17022781 attagaggtcaatgagttggatccaattttagtttatgatagaatattatggt 17022729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 156
Target Start/End: Complemental strand, 19676206 - 19676086
Alignment:
Q  37 aaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccactta 135  Q
    |||| ||||||||| ||| | |||| ||||||||||||||||||||  | ||||||| | ||||||||  |  |||||||||| |||  ||  |||||||    
T  19676206 aaactattaggaaaaatttagaggttaatgagttggatccaaatatgctgtatgatagagcattatggcgtgatttgatccatgtagctgaccccactta 19676107  T
Q  136 gtggggtaagacttgattgtt 156  Q
    ||||| |||| |||| |||||    
T  19676106 gtgggataaggcttggttgtt 19676086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 160
Target Start/End: Complemental strand, 24778682 - 24778610
Alignment:
Q  88 tgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||||| ||||||||||| || |||||||||| ||| |||  |||||||||||| |||| ||||  ||||||||    
T  24778682 tgatagaacattatggtgtaatttgatccatgtagccgaccccacttagtgggataaggcttggctgttgttg 24778610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 160
Target Start/End: Original strand, 25191534 - 25191658
Alignment:
Q  37 aaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccactta 135  Q
    |||||||||| ||||||| | |||||||||| || |||| ||||||  ||| ||||| |||| |||||  |  |||||||||| |||  ||| |||||||    
T  25191534 aaaccattagaaaagatttagaggtcaatgaattagatcaaaatatggtttttgatagaacactatggcgtcatttgatccatgtagctgatcccactta 25191633  T
Q  136 gtggggtaagacttgattgttgttg 160  Q
    ||||| |||  |||| |||||||||    
T  25191634 gtgggataatgcttggttgttgttg 25191658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 45486926 - 45486850
Alignment:
Q  84 tttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||||||||| |||||||||| ||| |||||||||| ||| ||   |||||||||||| |||  |||| |||||||||    
T  45486926 tttatgatagaacattatggcataatttgatccatgtagccggccccacttagtgggataaagcttggttgttgttg 45486850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 46148233 - 46148309
Alignment:
Q  84 tttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||||||||| ||||||||||  || |||||||||| ||| |||  ||||||||||||  ||| |||| |||||||||    
T  46148233 tttatgatagaacattatggcgtaatttgatccatgtagccgaccccacttagtgggtcaaggcttggttgttgttg 46148309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 49841799 - 49841855
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccat 118  Q
    ||||||||||||| ||||||  | ||||||| |||||||||| ||| ||||||||||    
T  49841799 aatgagttggatcgaaatatggtatatgatagaacattatggcataatttgatccat 49841855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 160
Target Start/End: Complemental strand, 51447866 - 51447718
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| ||| ||| |||||||||| || |||| | ||||||||||||||||||||||| |  | ||||||| |||| |||||  |  |||    
T  51447866 gaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcattt 51447767  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||| ||| ||| ||   ||| |||||||| |||| |||| |||||||||    
T  51447766 gattcatgtagccggccccatttagtgggataaggcttggttgttgttg 51447718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 3e-20; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 150
Target Start/End: Original strand, 39708566 - 39708704
Alignment:
Q  14 gaagacataggaaaattata-gaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| |||| || |||||||||| || |||| | |||||||||||||||||||||||||  ||||||||| |||| ||||   || |||    
T  39708566 gaagacctaggaaaactataagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatatggtttatgatagaacactatgtcgtaattt 39708665  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttg 150  Q
    ||||||| |||||||  |||||||||||| |||||||||    
T  39708666 gatccatgtagtcgaccccacttagtgggataagacttg 39708704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 167
Target Start/End: Original strand, 6957731 - 6957886
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| ||| ||| |||||||||| || |||| | ||||||||||||||||||||||| | || ||||||| |||| ||||   |  |||    
T  6957731 gaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatttgatgtatgatagaacactatgacgtcattt 6957830  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttgt 167  Q
    ||||||| ||| |||| |||||||||||| |||| |||| ||||||||| ||||||    
T  6957831 gatccatgtagccgatcccacttagtgggataaggcttggttgttgttgttgttgt 6957886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 160
Target Start/End: Original strand, 28236360 - 28236463
Alignment:
Q  57 aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgtt 156  Q
    ||||||||||||||||||||||| |  ||||||||| || |||||||| || ||||||| || ||| |||  |||||||||||| ||||||||| |||||    
T  28236360 aggtcaatgagttggatccaaatttggtttatgatagaatattatggtgtaatttgatctatgtagccgaccccacttagtgggataagacttggttgtt 28236459  T
Q  157 gttg 160  Q
    ||||    
T  28236460 gttg 28236463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 37 - 170
Target Start/End: Original strand, 21528445 - 21528579
Alignment:
Q  37 aaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccactta 135  Q
    |||||||||| ||||||| | ||||||||||||||||| |||||||  ||| ||||| |||| ||||||    |||||||||| ||| |||  |||||||    
T  21528445 aaaccattagaaaagatttagaggtcaatgagttggattcaaatatggtttttgatagaacactatggtggcatttgatccatgtagccgaccccactta 21528544  T
Q  136 gtggggtaagacttgattgttgttgatgttgttgt 170  Q
    ||||| |||| |||| ||||||||| |||||||||    
T  21528545 gtgggataaggcttggttgttgttgttgttgttgt 21528579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 171
Target Start/End: Complemental strand, 1777166 - 1777007
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| ||| ||| |||||||||| ||||||| | ||||||||||||||||||||||| |  | ||||||| |||| |||||  |  |||    
T  1777166 gaagacctaggaaaactattagagaaaccattagaaaagatttagaggtcaatgagttggatccaaatttggtgtatgatagaacagtatggcgtcattt 1777067  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttgttgtt 171  Q
    ||||||| ||| |||  ||||||| |||| |||| |||| ||||||||| | ||||||||    
T  1777066 gatccatgtagccgaccccacttaatgggataaggcttggttgttgttgttcttgttgtt 1777007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 166
Target Start/End: Complemental strand, 48174223 - 48174088
Alignment:
Q  32 tagaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattcc 130  Q
    |||| |||||||||| || |||| | ||||||||||||||||||||||| |  | ||||||||||||||||||  |  |||||||||| |||  ||  ||    
T  48174223 tagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgataaaacattatggcgtcatttgatccatgtagcagacccc 48174124  T
Q  131 acttagtggggtaagacttgattgttgttgatgttg 166  Q
    |||||||||| |||| |||| ||||||||| |||||    
T  48174123 acttagtgggataaggcttggttgttgttgttgttg 48174088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 159
Target Start/End: Complemental strand, 55388310 - 55388213
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgtt 159  Q
    |||||||| |||| |||||| |||||||||| |||||| |||| || |||||||||| | |||||  |||||||||||| |||| |||| ||||||||    
T  55388310 aatgagttagatcgaaatatgatttatgatagaacattgtggtgtaatttgatccatgttgtcgaccccacttagtgggataaggcttggttgttgtt 55388213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 168
Target Start/End: Original strand, 8286572 - 8286728
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| ||| ||| |||||||||| || |||| | ||||||||||||||||||||||| |  ||||||||| |||| ||||   |  |||    
T  8286572 gaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtttatgatagaacactatgacgtcattt 8286671  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttgtt 168  Q
    ||||||| ||| ||   |||||||||||| |||| |||| ||||||||| |||||||    
T  8286672 gatccatgtagccgcccccacttagtgggataaggcttggttgttgttgttgttgtt 8286728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 160
Target Start/End: Complemental strand, 26037630 - 26037506
Alignment:
Q  37 aaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccactta 135  Q
    |||| ||||||||||||| | |||| ||||||||||||||||||||  ||||||||| |||| |||||  || || ||||||| ||| |||  |||||||    
T  26037630 aaactattaggaaagatttagaggtgaatgagttggatccaaatatggtttatgatagaacactatggcgtaattggatccatgtagccgaccccactta 26037531  T
Q  136 gtggggtaagacttgattgttgttg 160  Q
    ||||| ||||  ||| |||||||||    
T  26037530 gtgggataaggtttggttgttgttg 26037506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 160
Target Start/End: Complemental strand, 39100685 - 39100537
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| ||| ||| |||||||||| || ||||   |||||||||||||||||||||||||  ||||| ||| ||||||||||  || | |    
T  39100685 gaagacctaggaaaactattagagaaaccattagaaaggatttggaggtcaatgagttggatccaaatattgtttatcatagaacattatggcgtaatat 39100586  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
     |||||| ||| |||  |||||||||||| |||| |||| |||||||||    
T  39100585 aatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 39100537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 172
Target Start/End: Complemental strand, 53518452 - 53518313
Alignment:
Q  33 agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattcca 131  Q
    |||||||| | ||||||||||| | |||| ||||||||||||| ||||||  ||||||||| |||| |||||  || ||||||||||  || |||  |||    
T  53518452 agaaaaactaataggaaagatttagaggttaatgagttggatctaaatatggtttatgatagaacactatggcgtaatttgatccatgcag-cgacccca 53518354  T
Q  132 cttagtggggtaagacttgattgttgttgatgttgttgttt 172  Q
    ||||||||| || |||| | ||||||||| |||||||||||    
T  53518353 cttagtgggataggactcggttgttgttgctgttgttgttt 53518313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 167
Target Start/End: Original strand, 33227338 - 33227497
Alignment:
Q  10 agatgaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtata 107  Q
    |||||||||| |||||||| ||| |||||||||||||| || |||| | ||||||||||||||||||||||| |  | ||||||| |||| ||||   |     
T  33227338 agatgaagacctaggaaaactattagaaaaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatgacgtc 33227437  T
Q  108 gtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttgt 167  Q
     |||||||||| ||| |||| |||| ||||||  |||| |||| ||||| ||| ||||||    
T  33227438 atttgatccatgtagccgatcccacctagtggaataaggcttggttgtttttgttgttgt 33227497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 171
Target Start/End: Original strand, 35690476 - 35690563
Alignment:
Q  84 tttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttgttgtt 171  Q
    ||||||||| ||||||||||  || |||||||||| ||| |||  |||||||||||| ||||||||| || |||||| ||||||||||    
T  35690476 tttatgatagaacattatggcgtaatttgatccatgtagccgaccccacttagtgggataagacttggtttttgttgttgttgttgtt 35690563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 171
Target Start/End: Original strand, 32339745 - 32339851
Alignment:
Q  65 gagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgt 164  Q
    |||||||||  | |||| || ||||||| || |||||||  | ||||||||||| ||||| |||| |||||||||| |||| |||| ||||||||| |||    
T  32339745 gagttggatagagatatgatatatgatagaaaattatggcgtcgtttgatccatgtagtctattctacttagtgggataaggcttggttgttgttgttgt 32339844  T
Q  165 tgttgtt 171  Q
    |||||||    
T  32339845 tgttgtt 32339851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 160
Target Start/End: Complemental strand, 34208388 - 34208270
Alignment:
Q  42 attaggaaagattaaaggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtgggg 141  Q
    |||||||||| ||| || | ||||||||||||||||||||  ||||||||| ||||||||||   | |||||||||| || ||||  || |||| ||||     
T  34208388 attaggaaagtttagagattaatgagttggatccaaatatggtttatgatagaacattatggcgcaatttgatccatgtactcgaccccccttattggga 34208289  T
Q  142 taagacttgattgttgttg 160  Q
    |||| |||| |||||||||    
T  34208288 taaggcttggttgttgttg 34208270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 160
Target Start/End: Complemental strand, 47265344 - 47265196
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaaga--ttaaaggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtt 110  Q
    |||||| |||||||| ||| ||| |||||||||| |||||  ||| ||||||||||||||||||||||| | || ||||||| |||| ||| || || ||    
T  47265344 gaagacctaggaaaactattagagaaaccattag-aaagaatttagaggtcaatgagttggatccaaatttgatctatgatagaacactatagtgtaatt 47265246  T
Q  111 tgatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    |||||||| ||| |||   ||||||||||| |||| |||| || ||||||    
T  47265245 tgatccatgtagccgacctcacttagtgggataaggcttggttattgttg 47265196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 165
Target Start/End: Original strand, 53707946 - 53708080
Alignment:
Q  32 tagaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattcc 130  Q
    |||| |||||||||| || |||| | ||||||||||||||||||||||| |  | ||||||| |||| ||||   |  |||||||||| |||||||   |    
T  53707946 tagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatgacgtcatttgatccatttagtcgacatc 53708045  T
Q  131 acttagtggggtaagacttgattgttgttgatgtt 165  Q
    |||||||||| |||| |||||||||||||| ||||    
T  53708046 acttagtgggataaggcttgattgttgttgttgtt 53708080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 173
Target Start/End: Complemental strand, 44719426 - 44719349
Alignment:
Q  96 cattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttgttgtttt 173  Q
    ||||||||| | ||||||||||| ||| |||  | |||||||||| ||||||||| ||||||||| ||||||||||||    
T  44719426 cattatggtgtcgtttgatccatgtagccgaccctacttagtgggataagacttggttgttgttgttgttgttgtttt 44719349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 160
Target Start/End: Original strand, 436362 - 436510
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| ||| ||| |||||| ||| || |||| | |||||||||||||| |||||||| |  | ||||||| |||| ||||| ||  |||    
T  436362 gaagacctaggaaaactattagagaaaccactagaaaggatttagaggtcaatgagttgaatccaaatttggtgtatgatagaacactatggcatcattt 436461  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||||||| ||| |||  |||||||||||| |||| |||| |||||||||    
T  436462 gatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 436510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 166
Target Start/End: Original strand, 25575007 - 25575111
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttga 161  Q
    ||||||||||||| ||||||  ||||||||| |||||| |||| || |||||||||| |||  ||  ||| |||||||| |||| |||| |||||||||     
T  25575007 aatgagttggatcgaaatatggtttatgatagaacattgtggtgtaatttgatccatgtagcagaccccatttagtgggataaggcttggttgttgttgt 25575106  T
Q  162 tgttg 166  Q
    |||||    
T  25575107 tgttg 25575111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 160
Target Start/End: Complemental strand, 27450304 - 27450181
Alignment:
Q  37 aaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccactta 135  Q
    |||||||| | ||||||| | ||||||||||||||||||||||||| |||| ||||| |||| |||||  |  |||||||||| ||| |||  |||||||    
T  27450304 aaaccattggaaaagatttagaggtcaatgagttggatccaaatatgattt-tgatagaacactatggcgtcatttgatccatgtagccgaccccactta 27450206  T
Q  136 gtggggtaagacttgattgttgttg 160  Q
    ||||| |||| |||| ||| |||||    
T  27450205 gtgggataaggcttggttgctgttg 27450181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 160
Target Start/End: Original strand, 28351744 - 28351840
Alignment:
Q  64 tgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||||||||||||||||||| |||||  || ||| |||||| ||  |||||||||| ||| |||  ||||||||||||||||| ||||  ||||||||    
T  28351744 tgagttggatccaaatatagtttatagtagaaccttatggaattatttgatccatgtagccgaccccacttagtggggtaaggcttggctgttgttg 28351840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 160
Target Start/End: Complemental strand, 31959963 - 31959815
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| ||| ||| |||| ||||| || |||| | ||||||||||||||||||||||| |  | ||||||| |||| |||||  |  |||    
T  31959963 gaagacctaggaaaactattagagaaactattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcattt 31959864  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||||||| ||| |||  |||||||||||| |||| |||| |||||||||    
T  31959863 gatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 31959815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 160
Target Start/End: Complemental strand, 52569640 - 52569516
Alignment:
Q  37 aaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccactta 135  Q
    |||||||||| || |||| | ||||||||||||||||||||||| |  | ||||||| |||| |||||  |  |||||||||| ||| |||  |||||||    
T  52569640 aaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgaccccactta 52569541  T
Q  136 gtggggtaagacttgattgttgttg 160  Q
    ||||| |||| |||| |||||||||    
T  52569540 gtgggataaggcttggttgttgttg 52569516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 165
Target Start/End: Original strand, 5306479 - 5306582
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttga 161  Q
    ||||||||||||||||||||  ||||||| | ||||||||||  || ||||||||||||||   |  |||||| ||||| |||| |||| |||||||||     
T  5306479 aatgagttggatccaaatatggtttatgacataacattatggcgtaatttgatccatatagctaaccccacttggtgggataaggcttggttgttgttgt 5306578  T
Q  162 tgtt 165  Q
    ||||    
T  5306579 tgtt 5306582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 156
Target Start/End: Original strand, 7947115 - 7947214
Alignment:
Q  57 aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgtt 156  Q
    |||||||| |||||||||||||| | |||||||||| |||| |||  | || |||||||||| ||| |||  |||||||||||| |||| |||| |||||    
T  7947115 aggtcaatcagttggatccaaatttgatttatgatagaacactatcatgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgtt 7947214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 160
Target Start/End: Complemental strand, 20601756 - 20601653
Alignment:
Q  57 aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgtt 156  Q
    ||||||||||||||||| ||||||| |||||||||| |||||||||   || |||||| ||| ||   ||  |||||||||||| ||||| || ||||||    
T  20601756 aggtcaatgagttggattcaaatatgatttatgatagaacattatgacgtaatttgattcatgtaactgaacccacttagtgggataagagttaattgtt 20601657  T
Q  157 gttg 160  Q
    ||||    
T  20601656 gttg 20601653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 20821160 - 20821077
Alignment:
Q  10 agatgaagacataggaaaattatagaaaaaccattaggaaagatt-aaaggtcaatgagttggatccaaatataatttatgata 92  Q
    |||||||||| |||||||| ||||  | || |||||| || |||| ||||||||||||||||||| ||||||| ||||||||||    
T  20821160 agatgaagacctaggaaaactataagagaaacattagaaaggatttaaaggtcaatgagttggattcaaatatgatttatgata 20821077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 171
Target Start/End: Original strand, 21236991 - 21237150
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| ||| ||| |||||||||| || |||| | ||||||||||||||||||||||| |  | ||||||| |||| |||||  |  |||    
T  21236991 gaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtatatgatagaacactatggcgtcattt 21237090  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttgttgtt 171  Q
    ||| ||| ||| | |  |||||||||||| ||||  ||| ||||||||| ||||||||||    
T  21237091 gatacatgtagccaaccccacttagtgggataaggattggttgttgttgttgttgttgtt 21237150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 166
Target Start/End: Complemental strand, 45209283 - 45209200
Alignment:
Q  83 atttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttg 166  Q
    |||||||||| || |||||||  ||||||||||||| ||| |||  |||||||||||| |||| |||| ||||||||| |||||    
T  45209283 atttatgatagaatattatggcgtagtttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttg 45209200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 165
Target Start/End: Original strand, 53540473 - 53540576
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttga 161  Q
    |||||||||||   ||||||  ||||||||| |||||||||| ||| |||||||||||||| | |  ||||| |||||| ||||||||| ||||| |||     
T  53540473 aatgagttggacaaaaatatggtttatgatagaacattatggcataatttgatccatatagccaaccccactgagtgggataagacttggttgttattgt 53540572  T
Q  162 tgtt 165  Q
    ||||    
T  53540573 tgtt 53540576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 170
Target Start/End: Original strand, 4440986 - 4441144
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| ||| ||| |||||||||| || |||| | ||||||||||||||||||||||| |  | ||||||| |||| |||||  |  |||    
T  4440986 gaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcattt 4441085  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttgttgt 170  Q
    ||||||| ||| |||  |||||||||||| |||| |||  | || |||| |||||||||    
T  4441086 gatccatgtagccgaccccacttagtgggataaggcttcgtcgtcgttgttgttgttgt 4441144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 102
Target Start/End: Original strand, 16003083 - 16003149
Alignment:
Q  37 aaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatg 102  Q
    |||||||||| ||| ||| | |||||||||||||||||| |||||| ||||||||||||||| ||||    
T  16003083 aaaccattagaaaaaatttagaggtcaatgagttggatctaaatatgatttatgataaaacactatg 16003149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 167
Target Start/End: Complemental strand, 19154967 - 19154857
Alignment:
Q  57 aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgtt 156  Q
    ||||||||||||||||||||||| |  ||||||||| |||| |||||  |  ||||||||||  ||  ||  |||||||||||| |||| |||| |||||    
T  19154967 aggtcaatgagttggatccaaatttggtttatgatagaacactatggcgttatttgatccatgcagctgaccccacttagtgggataaggcttggttgtt 19154868  T
Q  157 gttgatgttgt 167  Q
    |||| ||||||    
T  19154867 gttgttgttgt 19154857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 160
Target Start/End: Complemental strand, 23906448 - 23906298
Alignment:
Q  12 atgaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagt 109  Q
    |||||||| ||| |||| ||| ||| |||||||||| || |||| | ||||||||||||||||||||||| |  | ||||||| |||| |||||  |  |    
T  23906448 atgaagacctagaaaaactattagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcat 23906349  T
Q  110 ttgatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||||||||| |||  ||  |||||||||||| |||| |||| |||||||||    
T  23906348 ttgatccatgtagctgaccccacttagtgggataaggcttggttgttgttg 23906298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 168
Target Start/End: Original strand, 55007929 - 55008035
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttga 161  Q
    ||||||||||| | ||||||  ||||||||| | |||||||   || |||||||||| ||| |||  |||||||||||| |||| |||| |||||||||     
T  55007929 aatgagttggaccgaaatatggtttatgatagatcattatgacgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 55008028  T
Q  162 tgttgtt 168  Q
    |||||||    
T  55008029 tgttgtt 55008035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 169
Target Start/End: Complemental strand, 13805342 - 13805257
Alignment:
Q  84 tttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttgttg 169  Q
    ||||||||| |||||||||| ||| |||||||||| ||| | |  |||||||||||| || | |||| ||||||||| ||||||||    
T  13805342 tttatgatagaacattatgggataatttgatccatgtagccaaccccacttagtgggatatggcttggttgttgttgttgttgttg 13805257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 41729551 - 41729494
Alignment:
Q  60 tcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatcca 117  Q
    ||||||||||||||||||||||  ||||||||| |||| |||||  ||||||||||||    
T  41729551 tcaatgagttggatccaaatatggtttatgatagaacactatggcgtagtttgatcca 41729494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 166
Target Start/End: Original strand, 43434102 - 43434211
Alignment:
Q  57 aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgtt 156  Q
    |||||||||||| |||||||||| | || || |||| |||| || ||  |  |||||||||| |||||||  |||||||||||| |||| |||| |||||    
T  43434102 aggtcaatgagtcggatccaaatttgatgtaggatagaacactacggcgtcatttgatccatgtagtcgagcccacttagtgggataaggcttggttgtt 43434201  T
Q  157 gttgatgttg 166  Q
    |||| |||||    
T  43434202 gttgttgttg 43434211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 160
Target Start/End: Original strand, 32479195 - 32479319
Alignment:
Q  37 aaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccactta 135  Q
    |||||||||| ||||||| | |||||||||||||||||| ||||||  ||| ||||| |||| |||||  |  |||||||||| ||| |||  |||||||    
T  32479195 aaaccattagaaaagatttagaggtcaatgagttggatcaaaatatggtttttgatagaacactatggcgtcatttgatccatgtagccgaccccactta 32479294  T
Q  136 gtggggtaagacttgattgttgttg 160  Q
    ||||   ||| |||| |||||||||    
T  32479295 gtggaaaaaggcttggttgttgttg 32479319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 94
Target Start/End: Complemental strand, 41340646 - 41340614
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaa 94  Q
    |||||||||||||||||||||||||||||||||    
T  41340646 aatgagttggatccaaatataatttatgataaa 41340614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 160
Target Start/End: Complemental strand, 48622692 - 48622544
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| ||| ||| ||| |||||| ||||||| | ||||||||||||| ||||||||| |  | ||||||| |||| |||||  |  |||    
T  48622692 gaagacctaggaaaactattagagaaatcattagaaaagatttagaggtcaatgagtttgatccaaatttggtgtatgatagaacactatggcgtcattt 48622593  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
     |||||| ||| |||  |||||||||||| |||| |||| |||||||||    
T  48622592 aatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 48622544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 160
Target Start/End: Original strand, 51421887 - 51422011
Alignment:
Q  37 aaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccactta 135  Q
    |||| ||||||||||||| | |||| ||||| ||||||||||| ||  ||||||||| |||||||||   || |||||||||| ||| | ||  ||||||    
T  51421887 aaactattaggaaagatttagaggttaatgaattggatccaaaaatggtttatgatagaacattatgacgtaatttgatccatgtagccaatctcactta 51421986  T
Q  136 gtggggtaagacttgattgttgttg 160  Q
    ||||| |||  |||| |||||||||    
T  51421987 gtgggataaagcttggttgttgttg 51422011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 57 - 92
Target Start/End: Original strand, 1793640 - 1793675
Alignment:
Q  57 aggtcaatgagttggatccaaatataatttatgata 92  Q
    ||||||||||||||||||||||||| ||||||||||    
T  1793640 aggtcaatgagttggatccaaatatgatttatgata 1793675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 57 - 160
Target Start/End: Original strand, 19969359 - 19969462
Alignment:
Q  57 aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgtt 156  Q
    ||||||||||||||||||||||| |  ||||||||| |||  |||||  |  |||||||||| ||| |||  |||||||||||| |||| || | |||||    
T  19969359 aggtcaatgagttggatccaaatttggtttatgatagaacgctatggcgtcatttgatccatgtagccgaccccacttagtgggataaggctcggttgtt 19969458  T
Q  157 gttg 160  Q
    ||||    
T  19969459 gttg 19969462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 95
Target Start/End: Original strand, 50679637 - 50679720
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaa 95  Q
    |||||| |||||||| ||| ||| |||||||||| || |||| | ||||||||||||||||||||||| |  ||||||||||||    
T  50679637 gaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtttatgataaaa 50679720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 26024949 - 26024851
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||||||||||||| | | ||  ||||||||| ||||||||||| || ||| |||||| ||| |||   ||||||||||| |||| |||| |||||||||    
T  26024949 aatgagttggatcgagacatggtttatgatagaacattatggtgtaattttatccatgtagccgacctcacttagtgggataaggcttggttgttgttg 26024851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 109 - 170
Target Start/End: Complemental strand, 30634158 - 30634097
Alignment:
Q  109 tttgatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttgttgt 170  Q
    |||||||||| ||| |||  |||||||||||| |||| |||| ||||||||| |||||||||    
T  30634158 tttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgttgt 30634097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 61 - 102
Target Start/End: Original strand, 46749729 - 46749770
Alignment:
Q  61 caatgagttggatccaaatataatttatgataaaacattatg 102  Q
    ||||||||||||| ||||||| ||||||||||||| ||||||    
T  46749729 caatgagttggattcaaatatgatttatgataaaatattatg 46749770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 160
Target Start/End: Original strand, 56375442 - 56375571
Alignment:
Q  32 tagaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattcc 130  Q
    |||| |||||||||| || |||| | |||| |||||||||||||||||| |  | ||||||| |||| ||||   |  |||||||||| ||| |||   |    
T  56375442 tagagaaaccattagaaaggatttagaggtgaatgagttggatccaaatttggtgtatgatagaacactatgacgtcatttgatccatgtagccgacctc 56375541  T
Q  131 acttagtggggtaagacttgattgttgttg 160  Q
    |||||||||| ||||||||| |||||||||    
T  56375542 acttagtgggataagacttggttgttgttg 56375571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 7970480 - 7970424
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccat 118  Q
    |||||||| |||  ||||||| | ||||||||||||||||||| | |||||||||||    
T  7970480 aatgagttagatagaaatatagtatatgataaaacattatggtgtcgtttgatccat 7970424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 160
Target Start/End: Original strand, 82852 - 82999
Alignment:
Q  14 gaagacataggaaaattatagaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttg 112  Q
    |||||| |||||||| |||||| |||||||||| || |||| | ||||||||||||||||||||||||| |||||||||| |||| ||||   |  ||||    
T  82852 gaagacctaggaaaactatagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatatgatttatgatagaacactatgacgtcatttg 82951  T
Q  113 atccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    |||||| ||| |||  ||||||| |||  |||| |||| |||||||||    
T  82952 atccatgtagccgaccccacttaatggaataaggcttggttgttgttg 82999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 167
Target Start/End: Original strand, 4496517 - 4496672
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| ||| ||| |||||||||| || |||| | ||||||||||||||||||||||| |  | ||||||| |||| ||||| ||  |||    
T  4496517 gaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcatcattt 4496616  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttgt 167  Q
    ||||||| ||| |||  |||||||||||| |||| |||| ||||||||| ||||||    
T  4496617 gatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgt 4496672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 57 - 160
Target Start/End: Original strand, 5558319 - 5558422
Alignment:
Q  57 aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgtt 156  Q
    |||||||||||| ||||||||||||  ||||||||| |||| ||||| ||| |||||||||| ||| |||  |||||||||||| |||| |||| ||||     
T  5558319 aggtcaatgagtaggatccaaatatggtttatgatagaacactatggcataatttgatccatgtagccgaccccacttagtgggataaggcttggttgtc 5558418  T
Q  157 gttg 160  Q
    ||||    
T  5558419 gttg 5558422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 171
Target Start/End: Original strand, 10639435 - 10639594
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| ||| ||| |||||||||| || |||| | ||||||||||||||||||||||| |  | ||||||| |||| |||||  |  |||    
T  10639435 gaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcattt 10639534  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttgttgtt 171  Q
    ||||||| ||| |||  |||||| ||||| |||| |||| ||||||||| ||||||||||    
T  10639535 gatccatgtagccgaccccactttgtgggataaggcttggttgttgttgttgttgttgtt 10639594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 165
Target Start/End: Original strand, 14667954 - 14668057
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttga 161  Q
    |||||||||||||||| |||  ||||||||| ||||||||||| || |||||||||| ||  |||  |||||||||||| ||||||||| |||| ||||     
T  14667954 aatgagttggatccaagtatggtttatgatagaacattatggtgtaatttgatccatgtaaccgaccccacttagtgggataagacttggttgtagttgt 14668053  T
Q  162 tgtt 165  Q
    ||||    
T  14668054 tgtt 14668057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 160
Target Start/End: Original strand, 18855798 - 18855888
Alignment:
Q  70 ggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||||||||||||  ||||||||| |||||||| | ||| |||||||||| ||| |||  |||||||||||| ||||||||| |||||||||    
T  18855798 ggatccaaatatggtttatgatagaacattatagcataatttgatccatgtagccgaccccacttagtgggataagacttggttgttgttg 18855888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 150
Target Start/End: Original strand, 38685100 - 38685238
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| ||| ||| |||||||||| || |||| | |||||||||||||||||||||||||  ||||||||| |||| |||||  |  |||    
T  38685100 gaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatatggtttatgatagaacaatatggcgtcattt 38685199  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttg 150  Q
    ||||||| ||| |||  |||||||||||| |||| ||||    
T  38685200 gatccatgtagccgaccccacttagtgggataaggcttg 38685238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 169
Target Start/End: Complemental strand, 12492533 - 12492376
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| ||| ||| |||||||||| || |||| | ||||||||||||||||||||||| |  | ||||||| |||| |||||  |  |||    
T  12492533 gaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcattt 12492434  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttgttg 169  Q
    ||| ||| ||| |||  |||||||||||| |||| |||| ||||||||| ||||||||    
T  12492433 gatgcatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgttg 12492376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 160
Target Start/End: Complemental strand, 13561511 - 13561387
Alignment:
Q  37 aaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccactta 135  Q
    |||||||||| ||||||| | ||||||||||||||||||||| |||  ||| ||||| |||| |||||  |  |||||||||| ||| |||  |||||||    
T  13561511 aaaccattagaaaagatttagaggtcaatgagttggatccaactatggtttttgatagaacactatggcgtcatttgatccatgtagccgaccccactta 13561412  T
Q  136 gtggggtaagacttgattgttgttg 160  Q
    ||||| |||| |||| |||||||||    
T  13561411 gtgggataaggcttgtttgttgttg 13561387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 160
Target Start/End: Original strand, 29816515 - 29816663
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| ||| ||| |||||||||| || |||| | ||||||||||||||||||||||| |  | ||||||| |||| |||||  |  |||    
T  29816515 gaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcattt 29816614  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||||||| ||| |||  |||||||||||| |||| |||| |||||||||    
T  29816615 gatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 29816663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 57 - 157
Target Start/End: Complemental strand, 38501522 - 38501422
Alignment:
Q  57 aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgtt 156  Q
    |||||||| |||||||||||||||| |||||||||| || | ||| || || | ||||| || ||| |||| |||||||||||| ||||||||| |||||    
T  38501522 aggtcaataagttggatccaaatatgatttatgatagaaaactatagtgtaatatgatcgatgtagccgatcccacttagtgggataagacttggttgtt 38501423  T
Q  157 g 157  Q
    |    
T  38501422 g 38501422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 162
Target Start/End: Original strand, 20456925 - 20457056
Alignment:
Q  32 tagaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattcc 130  Q
    |||| |||||||||| || |||| | |||||||| ||||| ||| |||| | || ||||||| ||||||||||  |  |||||||||| ||| |||  ||    
T  20456925 tagagaaaccattagaaaggatttagaggtcaataagttgaatctaaatttgatgtatgatagaacattatggcgtcatttgatccatgtagccgacccc 20457024  T
Q  131 acttagtggggtaagacttgattgttgttgat 162  Q
    |||||||||| |||| ||||||||||||||||    
T  20457025 acttagtgggataaggcttgattgttgttgat 20457056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 160
Target Start/End: Original strand, 3301996 - 3302125
Alignment:
Q  32 tagaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattcc 130  Q
    |||| |||||||||  ||||||| | |||||||||||||||||||||||||  ||| ||||| |||| || ||  |  |||||||||| ||| |||  ||    
T  3301996 tagagaaaccattataaaagatttagaggtcaatgagttggatccaaatatggtttttgatagaacactacggcgtcatttgatccatgtagccgacccc 3302095  T
Q  131 acttagtggggtaagacttgattgttgttg 160  Q
    |||||||||| |||| |||| |||||||||    
T  3302096 acttagtgggataaggcttggttgttgttg 3302125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 170
Target Start/End: Original strand, 14665849 - 14666003
Alignment:
Q  16 agacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttga 113  Q
    |||| |||||||| ||| ||| |||||||||||||  ||| | | |||||||||||||||||||||||  ||||||||| |||  | |||  || |||||    
T  14665849 agacctaggaaaactattagagaaaccattaggaagaatttagaagtcaatgagttggatccaaatatggtttatgatagaac--tctggcgtaatttga 14665946  T
Q  114 tccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttgttgt 170  Q
    || || ||| |||  |||||||||||| |||| |||| ||||||||| |||||||||    
T  14665947 tctatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgttgt 14666003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 167
Target Start/End: Complemental strand, 32442224 - 32442120
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttga 161  Q
    ||||||||||||||||||||  |||  |||| ||||||||||  || |||||||||| ||| ||| ||||||||||||| |||| |||| || ||||||     
T  32442224 aatgagttggatccaaatatggttttggatagaacattatggcgtaatttgatccatgtagccgactccacttagtgggataag-cttggttattgttgt 32442126  T
Q  162 tgttgt 167  Q
    ||||||    
T  32442125 tgttgt 32442120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 166
Target Start/End: Original strand, 43475422 - 43475526
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttga 161  Q
    ||||||||||||| |||||| ||||||| || ||| ||||||| || |||||||||  ||| | | |||||||| |||| |||| |||| |||||||||     
T  43475422 aatgagttggatcgaaatatgatttatggtagaacgttatggtgtaatttgatccacgtagccaactccacttaatgggataaggcttggttgttgttgt 43475521  T
Q  162 tgttg 166  Q
    |||||    
T  43475522 tgttg 43475526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 167
Target Start/End: Complemental strand, 28977008 - 28976853
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| ||| ||| |||||||||  || |||| | ||||||||||||||||||||||| |  | ||||||| |||| |||||  |  |||    
T  28977008 gaagacctaggaaaactattagagaaaccattataaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcattt 28976909  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttgt 167  Q
    ||| ||| ||| |||  |||||||||||| |||| |||| ||||||||| ||||||    
T  28976908 gattcatgtagccgaccccacttagtgggataaggcttggttgttgttgttgttgt 28976853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 418133 - 418035
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    |||||||||||||||||| |  ||||||||| ||||||||||  || |||||||||| ||| |||  |||||| ||||| || | ||||| ||||||||    
T  418133 aatgagttggatccaaatgtggtttatgatagaacattatggcgtaatttgatccatgtagccgaccccacttggtgggatatggcttgaatgttgttg 418035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 169
Target Start/End: Original strand, 30213755 - 30213865
Alignment:
Q  59 gtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgt 158  Q
    ||||||||||||||||||||| |  | ||||||| |||| |||||  |  |||||||||| ||| |||  |||||||||||| |||| |||| ||||| |    
T  30213755 gtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgtttt 30213854  T
Q  159 tgatgttgttg 169  Q
    || ||||||||    
T  30213855 tgttgttgttg 30213865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 86 - 160
Target Start/End: Complemental strand, 36123257 - 36123183
Alignment:
Q  86 tatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||||||| |||||||||||   ||||||||||| || ||| | |||||||||||| ||||||||| |||||||||    
T  36123257 tatgatagaacattatggtggcgtttgatccatgtaatcggtcccacttagtgggataagacttggttgttgttg 36123183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 167
Target Start/End: Original strand, 41894279 - 41894361
Alignment:
Q  85 ttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgttgt 167  Q
    |||||||| ||||||||||| || |||||||||| ||| | |  |||||||||||| ||||||||  ||||||||| ||||||    
T  41894279 ttatgatacaacattatggtgtaatttgatccatgtagccaaccccacttagtgggataagactttgttgttgttgttgttgt 41894361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 170
Target Start/End: Complemental strand, 683809 - 683692
Alignment:
Q  53 ttaaaggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgat 152  Q
    |||||| | ||| ||||| ||| ||||||  ||||||||| ||||||||| | ||||||||||||| ||| | |  |||||||| ||| ||||||||  |    
T  683809 ttaaagcttaattagttgtatcaaaatatggtttatgatagaacattatgttgtagtttgatccatgtagccaaccccacttagcgggataagactttgt 683710  T
Q  153 tgttgttgatgttgttgt 170  Q
    | |||||| |||||||||    
T  683709 ttttgttgttgttgttgt 683692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 159
Target Start/End: Complemental strand, 30639382 - 30639301
Alignment:
Q  78 atataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgtt 159  Q
    |||| |||||||| |||||||| ||| || ||||||||||| ||||| |  | |||||||||| ||||||||| ||||||||    
T  30639382 atatgatttatgacaaaacattgtggcatcgtttgatccatgtagtcaaccctacttagtgggataagacttggttgttgtt 30639301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 167
Target Start/End: Complemental strand, 2915625 - 2915490
Alignment:
Q  32 tagaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattcc 130  Q
    |||| |||||||||| || |||| | ||||||||||||||||||||||| |  || |||||| |||| |||||  |  |||||||||| ||| |||  ||    
T  2915625 tagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtt-atgatagaacactatggcgtcatttgatccatgtagccgacccc 2915527  T
Q  131 acttagtggggtaagacttgattgttgttgatgttgt 167  Q
    |||||||||| |||| |||| || |||||| ||||||    
T  2915526 acttagtgggataaggcttggttattgttgttgttgt 2915490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 165
Target Start/End: Original strand, 20367076 - 20367179
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttga 161  Q
    ||||||||||||||||||||  ||||||| | |||||||||   || |||||||||||||| | |  |||||| || || |||| |||| |||||||||     
T  20367076 aatgagttggatccaaatatggtttatgacataacattatgacgtaatttgatccatatagccaaccccacttggtaggataaggcttggttgttgttgt 20367175  T
Q  162 tgtt 165  Q
    ||||    
T  20367176 tgtt 20367179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 114
Target Start/End: Original strand, 28039 - 28117
Alignment:
Q  37 aaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgat 114  Q
    |||| ||||||||||||| | |||| ||| |||||||||||||||| |||| ||||| |||| ||||| ||| ||||||    
T  28039 aaactattaggaaagatttagaggttaataagttggatccaaatatgatttctgatagaacactatggcataatttgat 28117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 7678661 - 7678758
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||||||||||||| |||||   ||||| ||||| |||||||   ||||||||||||| ||| |||  |||||||||||| ||| ||||| |||||||||    
T  7678661 aatgagttggatcgaaatacggtttataataaa-cattatgaggtagtttgatccatgtagccgaccccacttagtgggataaaacttggttgttgttg 7678758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 160
Target Start/End: Complemental strand, 16914013 - 16913883
Alignment:
Q  32 tagaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcga-ttc 129  Q
    |||| |||||||||| || |||| | |||||||||||||||||||||||||  |||| |||| ||||  ||||  |  |||||||||| ||| |||   |    
T  16914013 tagagaaaccattagaaaggatttagaggtcaatgagttggatccaaatatggtttacgatagaacaccatggcgtcatttgatccatgtagccgacccc 16913914  T
Q  130 cacttagtggggtaagacttgattgttgttg 160  Q
    ||||||||||| |||| |||| |||||||||    
T  16913913 cacttagtgggataaggcttggttgttgttg 16913883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 2090575 - 2090652
Alignment:
Q  42 attaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccat 118  Q
    ||||||||||||| | |||| |||||| | |||||||||||| ||||||||  ||||||||||  || ||||||||||    
T  2090575 attaggaaagatttagaggttaatgagcttgatccaaatatagtttatgatccaacattatggcgtaatttgatccat 2090652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 65 - 154
Target Start/End: Complemental strand, 15252840 - 15252751
Alignment:
Q  65 gagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattg 154  Q
    |||||||||| |||||   ||||||||| ||||||||| | |||||| || ||| ||| |||  |||||||||||| |||| ||||||||    
T  15252840 gagttggatcgaaatagggtttatgatagaacattatgatgtagtttaattcatgtagccgaccccacttagtgggataaggcttgattg 15252751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 35685964 - 35686017
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatc 115  Q
    |||||| ||||| |||||||||||||||| |||||||||||  ||| |||||||    
T  35685964 aatgagatggatgcaaatataatttatgacaaaacattatgccataatttgatc 35686017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 127
Target Start/End: Original strand, 41808105 - 41808170
Alignment:
Q  62 aatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgat 127  Q
    ||||||||||||  |||||| || ||||||| |||||||||  || ||||||||||| ||||||||    
T  41808105 aatgagttggatataaatatgatgtatgatagaacattatgacatcgtttgatccatgtagtcgat 41808170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 92
Target Start/End: Original strand, 14911329 - 14911385
Alignment:
Q  37 aaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgata 92  Q
    |||||||||| ||||||| | |||| |||||||||||||||||||| |||| |||||    
T  14911329 aaaccattagaaaagatttagaggttaatgagttggatccaaatatgatttttgata 14911385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 160
Target Start/End: Original strand, 24178643 - 24178791
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| ||| ||| |||||||||| || |||| | || |||||||||||||||||||| || | ||||||| |||| ||||| ||  |||    
T  24178643 gaagacctaggaaaactattagagaaaccattagaaaggatttagagttcaatgagttggatccaaatttagtgtatgatagaacactatggcatcattt 24178742  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    |||| || ||| |||  ||||||| ||   |||| |||| |||||||||    
T  24178743 gatctatgtagccgaccccacttaatgaaataaggcttggttgttgttg 24178791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 37 - 160
Target Start/End: Original strand, 16735 - 16859
Alignment:
Q  37 aaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccactta 135  Q
    |||||||||| ||||||| | |||||||||||||||||||||||||  ||| ||||| |||| |||||  |  ||||||| || ||| ||| ||||||||    
T  16735 aaaccattagaaaagatttagaggtcaatgagttggatccaaatatggtttttgatagaacactatggcgtcatttgatctatgtagccgactccactta 16834  T
Q  136 gtggggtaagacttgattgttgttg 160  Q
    ||||| |||| |||| |||||||||    
T  16835 gtgggataaggcttggttgttgttg 16859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 160
Target Start/End: Complemental strand, 86703 - 86610
Alignment:
Q  67 gttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||||||||||||||| || ||||||| |||| ||||   || |||||||||| ||||||  ||||||||||||| || |||||| |||||||||    
T  86703 gttggatccaaatatgatgtatgatagaacactatgacgtaatttgatccatgtagtcggctccacttagtgggatacgacttgtttgttgttg 86610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 167
Target Start/End: Original strand, 14740 - 14871
Alignment:
Q  37 aaaccattaggaaagatt-aaaggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattccactta 135  Q
    |||||||||| || |||| ||||||||||||||||||| |||||||  ||||||||  |||| |||||  || |||||||||| ||| | |  |||| ||    
T  14740 aaaccattagaaaggatttaaaggtcaatgagttggattcaaatatggtttatgattgaacactatggcgtaatttgatccatgtagccaaccccacgta 14839  T
Q  136 gtggggtaagacttgattgttgttgatgttgt 167  Q
    ||||| |||  |||| ||||||||| ||||||    
T  14840 gtgggataaatcttggttgttgttgttgttgt 14871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 160
Target Start/End: Original strand, 483 - 612
Alignment:
Q  32 tagaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagtttgatccatatagtcgattcc 130  Q
    |||| |||||||||| || |||| | |||||||||||||| | |||||| |  | ||||||| |||| |||||  |  |||||||||| ||| |||  ||    
T  483 tagagaaaccattagaaaggatttagaggtcaatgagttgtacccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgacccc 582  T
Q  131 acttagtggggtaagacttgattgttgttg 160  Q
    |||||||||| |||| ||||||||||||||    
T  583 acttagtgggataaggcttgattgttgttg 612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 165
Target Start/End: Complemental strand, 1097 - 944
Alignment:
Q  14 gaagacataggaaaattat-agaaaaaccattaggaaagattaa-aggtcaatgagttggatccaaatataatttatgataaaacattatggtatagttt 111  Q
    |||||| |||||||| ||| ||| |||||||||  ||||||| | ||||||||||||||||||||||| |  | ||||||| |||| |||||  |  |||    
T  1097 gaagacctaggaaaactattagagaaaccattaaaaaagatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcattt 998  T
Q  112 gatccatatagtcgattccacttagtggggtaagacttgattgttgttgatgtt 165  Q
    ||||||| |||  ||  ||| |||||||| |||| |||| ||||||||| ||||    
T  997 gatccatgtagctgaccccatttagtgggataaggcttggttgttgttgttgtt 944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 160
Target Start/End: Complemental strand, 25518 - 25444
Alignment:
Q  86 tatgataaaacattatggtatagtttgatccatatagtcgattccacttagtggggtaagacttgattgttgttg 160  Q
    ||||||||||||||||||  | |||||||| || ||||| || |||||| ||||| |||| |||| |||||||||    
T  25518 tatgataaaacattatggcttcgtttgatctatgtagtcaatcccactttgtgggataaggcttggttgttgttg 25444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University