View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16515_low_86 (Length: 237)
Name: NF16515_low_86
Description: NF16515
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16515_low_86 |
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Alignment Details
Target: chr8 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 16 - 228
Target Start/End: Original strand, 29197081 - 29197293
Alignment:
| Q |
16 |
aacaatgattaataactctatttcatataatccgagacatataacaattttaaggaacaaattctccttacattaatccaccttacattaatgatgattg |
115 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29197081 |
aacaatgattaataactctatttcatataatccgagacatataacaattttaaggaacaaattctccttacattaatccaccttacattaatgatgattg |
29197180 |
T |
|
| Q |
116 |
ggtctagtggaaaaacttaatgaattaagataatgcctataaggatannnnnnnnnnnnnnnnaaagaagttaaagttactcatcaaaattagtattgat |
215 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
29197181 |
ggtctagtggaaaaacttaatgaattaagataatgcctataaggatattttgtttttgtttttaaagaagttaaagttactcatcaaaattagtattgac |
29197280 |
T |
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| Q |
216 |
cattgagtataat |
228 |
Q |
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|||||||||||| |
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| T |
29197281 |
tattgagtataat |
29197293 |
T |
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