View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16515_low_88 (Length: 236)
Name: NF16515_low_88
Description: NF16515
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16515_low_88 |
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Alignment Details
Target: chr4 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 51368536 - 51368746
Alignment:
| Q |
1 |
aaaaaactttacactaatggttaattaatagtgtaaatatttttacactaattctgtatacaaattaaattctatatatcaatacactgacagaggatct |
100 |
Q |
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| T |
51368536 |
aaaaaactttacacttatggttaattaatagtgtaaatatttttacactaatgctgtatacaaattaaattctatatatcagtacattgacagaggatct |
51368635 |
T |
|
| Q |
101 |
caaacacaaacttggaaaatcatgtaaatgcttttctaaggttacaatcaacagttaaaacttgacataactcaatcaatgtgtacattttacactttct |
200 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51368636 |
caaacacaaacttggaaaattatgtaaatgcttttctaaggttacaatcaacagttaaaacttgacataactcaatcaatgtgtacattttacactttct |
51368735 |
T |
|
| Q |
201 |
gcttatagcct |
211 |
Q |
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||||||||||| |
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| T |
51368736 |
gcttatagcct |
51368746 |
T |
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