View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16515_low_97 (Length: 212)

Name: NF16515_low_97
Description: NF16515
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16515_low_97
NF16515_low_97
[»] chr5 (15 HSPs)
chr5 (19-171)||(41334571-41334723)
chr5 (21-165)||(2614563-2614707)
chr5 (21-171)||(18034024-18034174)
chr5 (29-172)||(5257045-5257188)
chr5 (29-172)||(33801519-33801662)
chr5 (29-146)||(22512355-22512472)
chr5 (19-173)||(7617173-7617327)
chr5 (73-173)||(25914902-25915002)
chr5 (29-165)||(38470629-38470765)
chr5 (66-176)||(39122259-39122369)
chr5 (29-146)||(39122366-39122483)
chr5 (99-171)||(30622627-30622699)
chr5 (99-170)||(32473303-32473374)
chr5 (33-78)||(32473395-32473440)
chr5 (102-145)||(28177801-28177845)
[»] chr3 (29 HSPs)
chr3 (19-178)||(36150170-36150329)
chr3 (21-175)||(42394323-42394477)
chr3 (21-171)||(24688310-24688460)
chr3 (29-171)||(40808915-40809057)
chr3 (21-171)||(54237138-54237288)
chr3 (21-173)||(54246054-54246206)
chr3 (21-172)||(25413723-25413874)
chr3 (28-171)||(40480798-40480941)
chr3 (29-172)||(46941103-46941246)
chr3 (28-171)||(53581766-53581909)
chr3 (21-172)||(52629870-52630021)
chr3 (29-174)||(47190931-47191076)
chr3 (29-171)||(45126836-45126978)
chr3 (19-171)||(27748603-27748746)
chr3 (29-163)||(42100738-42100872)
chr3 (29-173)||(53273599-53273734)
chr3 (73-173)||(1078312-1078412)
chr3 (19-120)||(51249348-51249449)
chr3 (99-171)||(9434244-9434316)
chr3 (21-174)||(11064627-11064780)
chr3 (94-174)||(19148883-19148963)
chr3 (81-175)||(29556863-29556956)
chr3 (99-180)||(4190164-4190245)
chr3 (21-78)||(4190266-4190323)
chr3 (99-171)||(51757713-51757784)
chr3 (99-170)||(34791949-34792019)
chr3 (109-171)||(54429173-54429235)
chr3 (101-141)||(51419389-51419430)
chr3 (102-145)||(26141562-26141606)
[»] chr6 (21 HSPs)
chr6 (19-167)||(7292787-7292935)
chr6 (21-179)||(26669909-26670067)
chr6 (29-170)||(13743130-13743271)
chr6 (29-170)||(13748630-13748771)
chr6 (21-171)||(30736024-30736174)
chr6 (21-165)||(9698247-9698391)
chr6 (29-173)||(21279979-21280123)
chr6 (29-174)||(7367599-7367744)
chr6 (29-171)||(24203895-24204037)
chr6 (29-173)||(3213450-3213594)
chr6 (29-172)||(21293584-21293727)
chr6 (29-173)||(7273241-7273385)
chr6 (29-170)||(30014393-30014534)
chr6 (29-173)||(26466849-26466993)
chr6 (99-171)||(33242523-33242595)
chr6 (99-173)||(27441662-27441736)
chr6 (99-172)||(33254034-33254107)
chr6 (104-145)||(11427644-11427686)
chr6 (104-145)||(22880690-22880732)
chr6 (28-78)||(27441591-27441641)
chr6 (99-147)||(31109154-31109202)
[»] scaffold0119 (1 HSPs)
scaffold0119 (21-179)||(727-885)
[»] scaffold0038 (1 HSPs)
scaffold0038 (21-175)||(112697-112851)
[»] chr8 (27 HSPs)
chr8 (21-179)||(36743383-36743541)
chr8 (28-170)||(42197344-42197486)
chr8 (21-165)||(11582808-11582952)
chr8 (21-173)||(30660648-30660800)
chr8 (21-171)||(2547038-2547188)
chr8 (29-165)||(2165877-2166013)
chr8 (29-165)||(29705412-29705548)
chr8 (21-171)||(9241594-9241744)
chr8 (21-174)||(20148802-20148955)
chr8 (21-170)||(26125677-26125825)
chr8 (29-174)||(30912467-30912612)
chr8 (21-172)||(45397358-45397508)
chr8 (29-167)||(29800862-29801000)
chr8 (29-171)||(31384714-31384856)
chr8 (29-171)||(42295245-42295386)
chr8 (32-174)||(1375595-1375737)
chr8 (32-148)||(5754956-5755072)
chr8 (19-171)||(3743811-3743963)
chr8 (32-171)||(40528542-40528681)
chr8 (99-171)||(10678060-10678132)
chr8 (21-75)||(42699299-42699353)
chr8 (99-173)||(34304908-34304981)
chr8 (99-172)||(35181636-35181709)
chr8 (99-171)||(33629901-33629973)
chr8 (26-81)||(32328815-32328870)
chr8 (29-78)||(18066719-18066768)
chr8 (101-145)||(32032751-32032795)
[»] chr4 (41 HSPs)
chr4 (21-175)||(27550351-27550505)
chr4 (21-172)||(23036022-23036173)
chr4 (35-171)||(35017788-35017924)
chr4 (21-171)||(25051735-25051885)
chr4 (29-171)||(33703191-33703333)
chr4 (32-173)||(28982728-28982869)
chr4 (28-171)||(23204686-23204829)
chr4 (29-171)||(27893750-27893892)
chr4 (29-174)||(1771171-1771316)
chr4 (29-174)||(55966251-55966396)
chr4 (32-172)||(31680955-31681095)
chr4 (29-171)||(43514594-43514736)
chr4 (29-173)||(27864614-27864758)
chr4 (29-171)||(51512173-51512315)
chr4 (21-150)||(39631143-39631272)
chr4 (29-176)||(43735792-43735939)
chr4 (29-171)||(43949709-43949851)
chr4 (21-185)||(45490207-45490371)
chr4 (29-168)||(48463361-48463500)
chr4 (19-173)||(21687046-21687200)
chr4 (19-172)||(27316619-27316773)
chr4 (29-165)||(12497006-12497142)
chr4 (33-132)||(41878460-41878559)
chr4 (28-172)||(56215805-56215948)
chr4 (35-174)||(28988529-28988667)
chr4 (21-144)||(41327478-41327601)
chr4 (33-166)||(41848025-41848158)
chr4 (32-131)||(46412417-46412516)
chr4 (99-172)||(19880074-19880147)
chr4 (99-171)||(48435487-48435559)
chr4 (99-171)||(55272284-55272356)
chr4 (99-174)||(46827611-46827686)
chr4 (99-172)||(3756159-3756232)
chr4 (99-170)||(35037125-35037195)
chr4 (99-173)||(17619058-17619132)
chr4 (99-167)||(712080-712148)
chr4 (99-174)||(38851633-38851708)
chr4 (99-171)||(36004027-36004096)
chr4 (104-145)||(42044399-42044441)
chr4 (114-175)||(32728492-32728553)
chr4 (102-145)||(50526201-50526245)
[»] chr2 (30 HSPs)
chr2 (21-175)||(19047199-19047353)
chr2 (29-173)||(30838682-30838826)
chr2 (21-180)||(1750456-1750615)
chr2 (29-170)||(42849768-42849908)
chr2 (21-165)||(12302167-12302311)
chr2 (28-174)||(43490306-43490452)
chr2 (40-179)||(4764626-4764765)
chr2 (29-171)||(43335671-43335813)
chr2 (19-171)||(16096787-16096940)
chr2 (28-172)||(39149201-39149343)
chr2 (42-176)||(34817679-34817813)
chr2 (33-138)||(13780676-13780781)
chr2 (33-149)||(42026823-42026939)
chr2 (35-120)||(8896542-8896627)
chr2 (99-174)||(34895646-34895721)
chr2 (99-171)||(11825562-11825634)
chr2 (107-171)||(12415368-12415432)
chr2 (107-171)||(12427428-12427492)
chr2 (99-174)||(6518399-6518474)
chr2 (99-174)||(18491825-18491900)
chr2 (99-174)||(41281879-41281954)
chr2 (99-171)||(966742-966814)
chr2 (99-171)||(4299328-4299400)
chr2 (99-171)||(43114677-43114749)
chr2 (21-78)||(4451951-4452008)
chr2 (99-171)||(16804088-16804160)
chr2 (99-171)||(16843370-16843442)
chr2 (99-174)||(12531568-12531643)
chr2 (101-145)||(40613931-40613976)
chr2 (29-73)||(33229352-33229396)
[»] chr1 (24 HSPs)
chr1 (21-171)||(5489818-5489968)
chr1 (21-171)||(48498870-48499020)
chr1 (29-171)||(43570994-43571136)
chr1 (29-174)||(7447875-7448020)
chr1 (28-171)||(23989431-23989574)
chr1 (21-172)||(50448167-50448318)
chr1 (29-174)||(750210-750355)
chr1 (29-173)||(24769405-24769549)
chr1 (29-172)||(4401378-4401521)
chr1 (29-170)||(37814828-37814969)
chr1 (29-172)||(4888093-4888235)
chr1 (32-172)||(2497469-2497609)
chr1 (99-175)||(26585582-26585658)
chr1 (99-171)||(35000021-35000093)
chr1 (99-175)||(44112797-44112873)
chr1 (99-174)||(35003414-35003489)
chr1 (99-171)||(45705945-45706017)
chr1 (99-150)||(46168503-46168554)
chr1 (99-168)||(48119748-48119817)
chr1 (99-171)||(45639640-45639712)
chr1 (99-174)||(38113100-38113175)
chr1 (102-172)||(45427652-45427722)
chr1 (99-172)||(41065271-41065344)
chr1 (102-145)||(32813273-32813317)
[»] chr7 (27 HSPs)
chr7 (21-167)||(5015437-5015583)
chr7 (21-174)||(35069763-35069916)
chr7 (21-165)||(24000926-24001070)
chr7 (21-165)||(42538345-42538489)
chr7 (21-165)||(42972894-42973038)
chr7 (19-171)||(41861714-41861868)
chr7 (29-171)||(26898310-26898452)
chr7 (21-174)||(5810829-5810982)
chr7 (28-165)||(27393174-27393311)
chr7 (21-174)||(44326220-44326373)
chr7 (29-165)||(32029731-32029867)
chr7 (40-175)||(16180261-16180396)
chr7 (29-172)||(44416841-44416984)
chr7 (29-171)||(43343532-43343674)
chr7 (32-173)||(45326073-45326214)
chr7 (29-171)||(10573799-10573941)
chr7 (29-150)||(38160508-38160629)
chr7 (32-172)||(4638106-4638246)
chr7 (33-165)||(9216355-9216487)
chr7 (34-171)||(43317498-43317635)
chr7 (21-146)||(5194164-5194289)
chr7 (59-174)||(47279629-47279744)
chr7 (40-130)||(24280545-24280635)
chr7 (99-172)||(40237039-40237112)
chr7 (99-173)||(27535137-27535211)
chr7 (99-174)||(31408538-31408613)
chr7 (104-145)||(36361945-36361987)
[»] scaffold0187 (2 HSPs)
scaffold0187 (28-171)||(14097-14239)
scaffold0187 (28-171)||(24425-24567)
[»] scaffold0385 (1 HSPs)
scaffold0385 (32-171)||(11304-11443)
[»] scaffold0157 (1 HSPs)
scaffold0157 (29-165)||(23335-23471)
[»] scaffold0003 (2 HSPs)
scaffold0003 (99-173)||(45625-45699)
scaffold0003 (28-78)||(45720-45770)


Alignment Details
Target: chr5 (Bit Score: 125; Significance: 1e-64; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 19 - 171
Target Start/End: Complemental strand, 41334723 - 41334571
Alignment:
Q  19 tatacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaatttt 118  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  41334723 tatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaatttt 41334624  T
Q  119 gtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
    || |||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  41334623 gtatgggtgtaaagggtgtattgccacatggggtggtacatgtatcaccactc 41334571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 21 - 165
Target Start/End: Complemental strand, 2614707 - 2614563
Alignment:
Q  21 tacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgt 120  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||    
T  2614707 tacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcagaattttgt 2614608  T
Q  121 gtgggtgtaaaggatgtattgccacatgggatggtacatgtatca 165  Q
     |||||||||||| |||||||||||||| | ||||||||||||||    
T  2614607 atgggtgtaaagggtgtattgccacatgaggtggtacatgtatca 2614563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 21 - 171
Target Start/End: Original strand, 18034024 - 18034174
Alignment:
Q  21 tacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgt 120  Q
    |||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |    
T  18034024 tacaccctatgtattagggatatttttgtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttat 18034123  T
Q  121 gtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
     |||||||||||| |||||||||| ||||| |||||||||||||| |||||    
T  18034124 atgggtgtaaagggtgtattgccatatggggtggtacatgtatcatcactc 18034174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 29 - 172
Target Start/End: Original strand, 5257045 - 5257188
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||| || | || ||||||| |||||||||||| |||||||||    
T  5257045 atgtattagggatattttggtaatttcatctcacaaccacactttatcttctatttatgtggggtcaagattgccacatgtcagaattttatgtgggtgt 5257144  T
Q  129 aaaggatgtattgccacatgggatggtacatgtatcaccactct 172  Q
    ||||| |||||||||||||||| |||||||||||||||||||||    
T  5257145 aaagggtgtattgccacatggggtggtacatgtatcaccactct 5257188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 29 - 172
Target Start/End: Original strand, 33801519 - 33801662
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| |  ||| |||||||||||||||||||||||||||||||    
T  33801519 atgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttgtgtgggtgt 33801618  T
Q  129 aaaggatgtattgccacatgggatggtacatgtatcaccactct 172  Q
    ||||  ||||||||||||||||| ||||||| ||||| ||||||    
T  33801619 aaagagtgtattgccacatgggaaggtacatatatcatcactct 33801662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 29 - 146
Target Start/End: Original strand, 22512355 - 22512472
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||| |||    
T  22512355 atgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtggatgt 22512454  T
Q  129 aaaggatgtattgccaca 146  Q
    ||||| ||||||||||||    
T  22512455 aaagggtgtattgccaca 22512472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 7617173 - 7617327
Alignment:
Q  19 tatacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaatttt 118  Q
    ||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |  | | |||| ||| ||||||||||||    
T  7617173 tatacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttatgtgggatctaagttgtcacatgtcagaatttt 7617272  T
Q  119 gtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactctt 173  Q
    |||| |||||||| | |||||||||||||||| || ||||||||||| |||||||    
T  7617273 gtgttggtgtaaaaggtgtattgccacatggggtgatacatgtatcatcactctt 7617327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 73 - 173
Target Start/End: Complemental strand, 25915002 - 25914902
Alignment:
Q  73 tatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactct 172  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| | |||||||||||||| | |||||||||||||| ||||||    
T  25915002 tatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtgtgggtgtaaatggtgtattgccacatgaggtggtacatgtatcatcactct 25914903  T
Q  173 t 173  Q
    |    
T  25914902 t 25914902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 29 - 165
Target Start/End: Original strand, 38470629 - 38470765
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    |||||||| |||||||||||||| || || |||||| ||||||||||||||||||| |||| || |||| || |||||| |||||||||| |||||||||    
T  38470629 atgtattaaggatattttggtaaattcatttcacaatcacactttatcttctatttatgtggggtccagattaccacgtatcagaattttatgtgggtgt 38470728  T
Q  129 aaaggatgtattgccacatgggatggtacatgtatca 165  Q
    ||||| |||||||||| ||| | ||||||||||||||    
T  38470729 aaagggtgtattgccatatgaggtggtacatgtatca 38470765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 66 - 176
Target Start/End: Complemental strand, 39122369 - 39122259
Alignment:
Q  66 cacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatca 165  Q
    |||||||||||||||||||||||| ||   |||||||||| ||||||||| |||||||| |||||| ||| ||||| |||||||| ||||||||||||||    
T  39122369 cacactttatcttctatttgtgtggggtttaggttgccacatgtcagaatcttgtgtggatgtaaatgatatattgtcacatggggtggtacatgtatca 39122270  T
Q  166 ccactctttaa 176  Q
    |||||||||||    
T  39122269 ccactctttaa 39122259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 29 - 146
Target Start/End: Complemental strand, 39122483 - 39122366
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    |||||||||| |||||||||||| || |||||||||| ||||||||||||||||||||||| ||   |||||||||| ||||||||| |||||||| |||    
T  39122483 atgtattaggaatattttggtaaattcatctcacaactacactttatcttctatttgtgtggggtttaggttgccacatgtcagaatcttgtgtggatgt 39122384  T
Q  129 aaaggatgtattgccaca 146  Q
    ||| ||| ||||| ||||    
T  39122383 aaatgatatattgtcaca 39122366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 30622699 - 30622627
Alignment:
Q  99 ttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
    ||||||| ||||| ||||||||||||||||||  | ||||||||||||||||   ||||||||||||||||||    
T  30622699 ttgccacatgtcaaaattttgtgtgggtgtaagaggtgtattgccacatgggggtgtacatgtatcaccactc 30622627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 99 - 170
Target Start/End: Complemental strand, 32473374 - 32473303
Alignment:
Q  99 ttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccact 170  Q
    ||||||| ||||||||||||||||||||||||  | |||||||||||||||    |||||||||||||||||    
T  32473374 ttgccacatgtcagaattttgtgtgggtgtaagaggtgtattgccacatggaggtgtacatgtatcaccact 32473303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 32473440 - 32473395
Alignment:
Q  33 attagggatattttggtaagttaatctcacaaccacactttatctt 78  Q
    ||||||||||||||||||| || |||||||||||| ||||| ||||    
T  32473440 attagggatattttggtaatttcatctcacaaccatactttctctt 32473395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 145
Target Start/End: Complemental strand, 28177845 - 28177801
Alignment:
Q  102 ccacgtgtcagaattttgtgtgggtgt-aaaggatgtattgccac 145  Q
    |||||||||||| |||||||||||||| ||||| |||||||||||    
T  28177845 ccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 28177801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 124; Significance: 6e-64; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 19 - 178
Target Start/End: Original strand, 36150170 - 36150329
Alignment:
Q  19 tatacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaatttt 118  Q
    |||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||    
T  36150170 tatacaccctatgtatcagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggagtccaggttgccacgtgtcagaatttt 36150269  T
Q  119 gtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactctttaaaa 178  Q
    |||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  36150270 gtgtggatgtaaagggtgtattgccacatggggtggtacatgtatcaccactctttaaaa 36150329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 21 - 175
Target Start/End: Complemental strand, 42394477 - 42394323
Alignment:
Q  21 tacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgt 120  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||| ||||||||||||| ||||||||    
T  42394477 tacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcaaaattttgt 42394378  T
Q  121 gtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactcttta 175  Q
     |||||||||||| |||||||||||||||| |||||||||||||| |||||||||    
T  42394377 atgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcactcttta 42394323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 21 - 171
Target Start/End: Complemental strand, 24688460 - 24688310
Alignment:
Q  21 tacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgt 120  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| || |||||||||||||||||||||||||||    
T  24688460 tacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttatgtggggtccaggttgccacgtgtcagaattttgt 24688361  T
Q  121 gtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
    ||||| ||||| | |||||||||||||||| |||||||||||||| |||||    
T  24688360 gtgggggtaaatggtgtattgccacatggggtggtacatgtatcatcactc 24688310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 29 - 171
Target Start/End: Original strand, 40808915 - 40809057
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||    
T  40808915 atgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtgtggatgt 40809014  T
Q  129 aaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
    ||| | |||||||||||||||| |||||||||||||| |||||    
T  40809015 aaaaggtgtattgccacatggggtggtacatgtatcatcactc 40809057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 21 - 171
Target Start/End: Original strand, 54237138 - 54237288
Alignment:
Q  21 tacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgt 120  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||| ||||    
T  54237138 tacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcagaatattgt 54237237  T
Q  121 gtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
     |||||||||||| |||||||||||||||| |||||||||||||| |||||    
T  54237238 atgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcactc 54237288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 21 - 173
Target Start/End: Complemental strand, 54246206 - 54246054
Alignment:
Q  21 tacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgt 120  Q
    |||||| |||||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||| || |||||||||||| |||||||||||| |    
T  54246206 tacaccctatgtattagagatatttttgtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttat 54246107  T
Q  121 gtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactctt 173  Q
    |||||||||||| ||||||||||||||||| |||||||||||||| |||||||    
T  54246106 gtgggtgtaaagaatgtattgccacatggggtggtacatgtatcatcactctt 54246054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 21 - 172
Target Start/End: Original strand, 25413723 - 25413874
Alignment:
Q  21 tacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgt 120  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| || ||||||| |||||||||||| ||||||    
T  25413723 tacaccttatgtattagggatatttttgtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttaccacgtgtcagagttttgt 25413822  T
Q  121 gtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactct 172  Q
    ||||||||||||| ||||||| || ||||| |||||||||||||| ||||||    
T  25413823 gtgggtgtaaagggtgtattgtcatatggggtggtacatgtatcatcactct 25413874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 28 - 171
Target Start/End: Original strand, 40480798 - 40480941
Alignment:
Q  28 tatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtg 127  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||||||||||    
T  40480798 tatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtagggtccaggttgccacgtgtcagaattttgtgtgggtg 40480897  T
Q  128 taaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
    |||||| ||||||||| |||||| || ||||||||||| |||||    
T  40480898 taaagggtgtattgccgcatggggtgatacatgtatcatcactc 40480941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 29 - 172
Target Start/End: Original strand, 46941103 - 46941246
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||| |||||||||    
T  46941103 atgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttatgtgggtgt 46941202  T
Q  129 aaaggatgtattgccacatgggatggtacatgtatcaccactct 172  Q
    ||||  |||||||||||||||| |||||||||||||| ||||||    
T  46941203 aaagagtgtattgccacatggggtggtacatgtatcatcactct 46941246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 28 - 171
Target Start/End: Complemental strand, 53581909 - 53581766
Alignment:
Q  28 tatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtg 127  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  53581909 tatgtattagggatattttgataagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtgtgggtg 53581810  T
Q  128 taaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
    |||||| ||||||||||||| || ||||||| |||||| |||||    
T  53581809 taaagggtgtattgccacatagggtggtacaggtatcatcactc 53581766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 21 - 172
Target Start/End: Original strand, 52629870 - 52630021
Alignment:
Q  21 tacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgt 120  Q
    |||||| ||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||| |||  || ||||||||| |||||||||||||||||    
T  52629870 tacaccctatgtattaaggatatttttgtaagttcatctcacaaccacactttatcttctatttatgtagggtccaggttgctacgtgtcagaattttgt 52629969  T
Q  121 gtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactct 172  Q
    ||||||||||||| |||||||||||||||| |||||||||||||| ||||||    
T  52629970 gtgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcactct 52630021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 29 - 174
Target Start/End: Complemental strand, 47191076 - 47190931
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    ||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||| || ||| ||| |||| ||||||||||||||||||||||    
T  47191076 atgtattagagatattttgataagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttaccacatgtcagaattttgtgtgggtgt 47190977  T
Q  129 aaaggatgtattgccacatgggatggtacatgtatcaccactcttt 174  Q
    ||||| ||||||||||||||| ||||||||||||||| ||||||||    
T  47190976 aaagggtgtattgccacatggaatggtacatgtatcatcactcttt 47190931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 29 - 171
Target Start/End: Complemental strand, 45126978 - 45126836
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||| || |||| || |||| || ||||||||| |||||||||    
T  45126978 atgtattagggatattttggtaagttcatctcacaaccacactttattttctatttatgtggggtccagattaccacatgccagaattttatgtgggtgt 45126879  T
Q  129 aaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
    ||||| |||||||||||||||  ||||||||||||||||||||    
T  45126878 aaagggtgtattgccacatggagtggtacatgtatcaccactc 45126836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 19 - 171
Target Start/End: Original strand, 27748603 - 27748746
Alignment:
Q  19 tatacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaatttt 118  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||| || |||||||||||| ||||||||||||    
T  27748603 tatacaccttatgtattagggatattttggtaagttcatctcacaacaatactttatcttctatttgtgtggggtccaggttgccacatgtcagaatttt 27748702  T
Q  119 gtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
    |||| ||         |||||||||||||||| ||||||||||||||||||||    
T  27748703 gtgtcgg---------tgtattgccacatggggtggtacatgtatcaccactc 27748746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 29 - 163
Target Start/End: Original strand, 42100738 - 42100872
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||  |  |||||||||||||||||||||||| |||||||||    
T  42100738 atgtattagggatattttggtaagttcatctcacaaccacattttatcttttatttgtgtggagttcaggttgccacgtgtcagaattttatgtgggtgt 42100837  T
Q  129 aaaggatgtattgccacatgggatggtacatgtat 163  Q
    ||||| || ||||||||||| | ||||||||||||    
T  42100838 aaagggtgcattgccacatgaggtggtacatgtat 42100872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 29 - 173
Target Start/End: Complemental strand, 53273734 - 53273599
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||| ||||| |||| |  ||||||| |||||| |||||||||||||| ||       
T  53273734 atgtattagggatattttggtaagttcatctcacaaccatactttatcttttatttatgtgggatccaggttaccacgtatcagaattttgtgtagg--- 53273638  T
Q  129 aaaggatgtattgccacatgggatggtacatgtatcaccactctt 173  Q
          ||||||||||||||||||||||||||||||| |||||||    
T  53273637 ------tgtattgccacatgggatggtacatgtatcatcactctt 53273599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 73 - 173
Target Start/End: Original strand, 1078312 - 1078412
Alignment:
Q  73 tatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactct 172  Q
    |||||||||||||||||  |  |||||||||||||||||||||||||||||| |||||||| |||||||||||||| | |||||||||||||| ||||||    
T  1078312 tatcttctatttgtgtggagttcaggttgccacgtgtcagaattttgtgtggatgtaaagggtgtattgccacatgaggtggtacatgtatcatcactct 1078411  T
Q  173 t 173  Q
    |    
T  1078412 t 1078412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 51249348 - 51249449
Alignment:
Q  19 tatacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaatttt 118  Q
    ||||||||| ||| |||| |||||||||||||| || |||||||||||||||||| ||||||||||||||| |  |||| ||||||| ||||||||||||    
T  51249348 tatacacctcatgcattaaggatattttggtaaattcatctcacaaccacactttctcttctatttgtgtgggatccagattgccacatgtcagaatttt 51249447  T
Q  119 gt 120  Q
    ||    
T  51249448 gt 51249449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 9434244 - 9434316
Alignment:
Q  99 ttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
    ||||||| ||||||||||||||||||||||||  | |||||||||||||||||  ||||||||||||||||||    
T  9434244 ttgccacatgtcagaattttgtgtgggtgtaagaggtgtattgccacatgggagtgtacatgtatcaccactc 9434316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 174
Target Start/End: Complemental strand, 11064780 - 11064627
Alignment:
Q  21 tacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgt 120  Q
    |||||| ||||  |||| ||||||||| | | || |||||| || |||||||  ||||||||||||||| || | || || |||| ||||| ||||||||    
T  11064780 tacaccctatgctttagagatattttgattaattcatctcataatcacacttactcttctatttgtgtggggtctagattaccacatgtcaaaattttgt 11064681  T
Q  121 gtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactcttt 174  Q
    |||||||||| || ||||||| ||||   ||  |||||||||||||||||||||    
T  11064680 gtgggtgtaaggggtgtattgtcacacaagagtgtacatgtatcaccactcttt 11064627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 174
Target Start/End: Original strand, 19148883 - 19148963
Alignment:
Q  94 ccaggttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactcttt 174  Q
    |||||||||||  ||||||||||||||||||||||||  | ||||||||||||||||   |||||||| |||||| |||||    
T  19148883 ccaggttgccatatgtcagaattttgtgtgggtgtaagtggtgtattgccacatgggggtgtacatgtgtcaccattcttt 19148963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 81 - 175
Target Start/End: Complemental strand, 29556956 - 29556863
Alignment:
Q  81 atttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactcttta 175  Q
    ||||||||| ||  ||||||||||| ||||||| |||| | ||||||||||   ||||||||||||||   ||||||||||||||||||||||||    
T  29556956 atttgtgtggggttcaggttgccacatgtcaga-ttttatatgggtgtaaattgtgtattgccacatgtagtggtacatgtatcaccactcttta 29556863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 180
Target Start/End: Complemental strand, 4190245 - 4190164
Alignment:
Q  99 ttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactctttaaaaat 180  Q
    ||||||| |||||| |||||||||||||||||  | |||||||||||||  |    ||||||||||||||||||||||||||    
T  4190245 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacataagggtatacatgtatcaccactctttaaaaat 4190164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 4190323 - 4190266
Alignment:
Q  21 tacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatctt 78  Q
    ||||||||||||||||| ||||||||||||| || |||||||||||| ||||| ||||    
T  4190323 tacaccttatgtattagagatattttggtaaattcatctcacaaccatactttctctt 4190266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 51757713 - 51757784
Alignment:
Q  99 ttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
    ||||||| |||||| ||| |||||||||||||  | | |||||||||||||| | ||||||||||||||||||    
T  51757713 ttgccacatgtcaggattgtgtgtgggtgtaagaggtatattgccacatggggt-gtacatgtatcaccactc 51757784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 170
Target Start/End: Original strand, 34791949 - 34792019
Alignment:
Q  99 ttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccact 170  Q
    ||||||| |||||| ||||||||||| |||||  | |||||||||| ||||||| ||| |||||||||||||    
T  34791949 ttgccacatgtcaggattttgtgtggatgtaagaggtgtattgccatatgggat-gtagatgtatcaccact 34792019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 171
Target Start/End: Complemental strand, 54429235 - 54429173
Alignment:
Q  109 tcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
    ||||||||||||||||||||||  | |||||||||| |||||   ||||||||||| ||||||    
T  54429235 tcagaattttgtgtgggtgtaagaggtgtattgccatatgggggtgtacatgtatcgccactc 54429173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 141
Target Start/End: Original strand, 51419389 - 51419430
Alignment:
Q  101 gccacgtgtcagaattttgtgtgggtg-taaaggatgtattg 141  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  51419389 gccacgtgtcagatttttgtgtgggtgttaaaggatgtattg 51419430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 145
Target Start/End: Original strand, 26141562 - 26141606
Alignment:
Q  102 ccacgtgtcagaattttgtgtgggtg-taaaggatgtattgccac 145  Q
    |||||||||||| ||||||||||||| |||||| |||||||||||    
T  26141562 ccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccac 26141606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 117; Significance: 9e-60; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 7292787 - 7292935
Alignment:
Q  19 tatacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaatttt 118  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  7292787 tatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaatttt 7292886  T
Q  119 gtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcacc 167  Q
    || || ||||||||| |||||||||||||||| ||||||||||||||||    
T  7292887 gtttgtgtgtaaagggtgtattgccacatggggtggtacatgtatcacc 7292935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 21 - 179
Target Start/End: Complemental strand, 26670067 - 26669909
Alignment:
Q  21 tacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgt 120  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||    
T  26670067 tacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggagtccaggttgccacgtgtcagaattttgt 26669968  T
Q  121 gtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactctttaaaaa 179  Q
    ||||||||||||| |||||||||||||| | |||||||| ||||||| |||||| ||||    
T  26669967 gtgggtgtaaagggtgtattgccacatgaggtggtacatatatcaccgctcttttaaaa 26669909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 29 - 170
Target Start/End: Complemental strand, 13743271 - 13743130
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||    
T  13743271 atgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaatcttgtgtgggtgt 13743172  T
Q  129 aaaggatgtattgccacatgggatggtacatgtatcaccact 170  Q
    ||||||| ||||||||||| || |||||||||||||||||||    
T  13743171 aaaggatatattgccacatagggtggtacatgtatcaccact 13743130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 29 - 170
Target Start/End: Complemental strand, 13748771 - 13748630
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||    
T  13748771 atgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaatcttgtgtgggtgt 13748672  T
Q  129 aaaggatgtattgccacatgggatggtacatgtatcaccact 170  Q
    ||||||| ||||||||||| || |||||||||||||||||||    
T  13748671 aaaggatatattgccacatagggtggtacatgtatcaccact 13748630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 21 - 171
Target Start/End: Original strand, 30736024 - 30736174
Alignment:
Q  21 tacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgt 120  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||| |||| || |||||||||||||||||||||||||||    
T  30736024 tacacctcatgtattagtgatattttggtaagttcatctcacaatcacactttatcttctatttatgtggggtccaggttgccacgtgtcagaattttgt 30736123  T
Q  121 gtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
    |||| |||||||| ||||||||||||||||||||||||||||||| |||||    
T  30736124 gtggatgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 30736174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 21 - 165
Target Start/End: Complemental strand, 9698391 - 9698247
Alignment:
Q  21 tacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgt 120  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||    
T  9698391 tacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcagaattttgt 9698292  T
Q  121 gtgggtgtaaaggatgtattgccacatgggatggtacatgtatca 165  Q
     |||||||||||| |||||||||||||| | ||||||||||||||    
T  9698291 atgggtgtaaagggtgtattgccacatgaggtggtacatgtatca 9698247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 29 - 173
Target Start/End: Original strand, 21279979 - 21280123
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||    
T  21279979 atgtattagggatattttggtaaattcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtgggtgt 21280078  T
Q  129 aaaggatgtattgccacatgggatggtacatgtatcaccactctt 173  Q
    ||||| | |||||||||||||| |||||||||||||| |||||||    
T  21280079 aaagggtatattgccacatggggtggtacatgtatcatcactctt 21280123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 29 - 174
Target Start/End: Original strand, 7367599 - 7367744
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||| |  |||||||||||||||||||||||||||||||||||    
T  7367599 atgtattagggatattttggtaagttcatctcacaaccacactttattttctatttatgtgggatccaggttgccacgtgtcagaattttgtgtgggtgt 7367698  T
Q  129 aaaggatgtattgccacatgggatggtacatgtatcaccactcttt 174  Q
    ||||| |||||||||||||||| |||||||||||||| || |||||    
T  7367699 aaagggtgtattgccacatggggtggtacatgtatcatcattcttt 7367744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 29 - 171
Target Start/End: Complemental strand, 24204037 - 24203895
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| || ||| ||||||||||||||||||||||||||| |||    
T  24204037 atgtattagggatattttggtaagttcatctcacaaccacactttatattctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtggatgt 24203938  T
Q  129 aaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
    ||||| ||||||| |||||||  |||||||||||||| |||||    
T  24203937 aaagggtgtattgtcacatggagtggtacatgtatcatcactc 24203895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 29 - 173
Target Start/End: Original strand, 3213450 - 3213594
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    |||||||| |||||||||||||| || || ||||||||| |||||||||||||||| |||| || |||| |||||||||||||||||||| |||||||||    
T  3213450 atgtattaaggatattttggtaaattcatttcacaaccatactttatcttctatttatgtggggtccagattgccacgtgtcagaattttatgtgggtgt 3213549  T
Q  129 aaaggatgtattgccacatgggatggtacatgtatcaccactctt 173  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||    
T  3213550 aaagggtgtattgccacatggggtggtacatgtatcaccactctt 3213594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 29 - 172
Target Start/End: Complemental strand, 21293727 - 21293584
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    |||||||| |||||||||||||| || || |||||||||||||||||||||||||| |||| || |||| |||||||||||||||||||| |||||||||    
T  21293727 atgtattaaggatattttggtaaattcatttcacaaccacactttatcttctatttatgtggggtccagattgccacgtgtcagaattttatgtgggtgt 21293628  T
Q  129 aaaggatgtattgccacatgggatggtacatgtatcaccactct 172  Q
    ||||| |||||||||||||| | |||||||||||||||||||||    
T  21293627 aaagggtgtattgccacatgaggtggtacatgtatcaccactct 21293584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 29 - 173
Target Start/End: Complemental strand, 7273385 - 7273241
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    ||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||| |||| || ||| |||||||||||||||||||||||||||||||    
T  7273385 atgtattagagatattttggtaagttcatctcacaatcacactttatcttctatttatgtggggtccaagttgccacgtgtcagaattttgtgtgggtgt 7273286  T
Q  129 aaaggatgtattgccacatgggatggtacatgtatcaccactctt 173  Q
    ||||  |||||| ||||||||| ||||||||| |||| |||||||    
T  7273285 aaagagtgtattaccacatggggtggtacatgcatcatcactctt 7273241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 29 - 170
Target Start/End: Original strand, 30014393 - 30014534
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    |||||||||| ||||||||||||||| |||||||||||| |||||||||||||||| | || || ||| ||| ||||||||||||||||||||||| |||    
T  30014393 atgtattaggcatattttggtaagttcatctcacaaccatactttatcttctatttatatggggtccaagttaccacgtgtcagaattttgtgtggatgt 30014492  T
Q  129 aaaggatgtattgccacatgggatggtacatgtatcaccact 170  Q
    ||||| |||||||||||||||| || ||||||||||| ||||    
T  30014493 aaagggtgtattgccacatggggtgatacatgtatcatcact 30014534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 29 - 173
Target Start/End: Original strand, 26466849 - 26466993
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| || ||  ||||||||||||| |||| ||||||| |||||||    
T  26466849 atgtattagggttattttggtaagttcatctcacaaccacactttatcttctatttgtttggggttcaggttgccacgtatcaggattttgtatgggtgt 26466948  T
Q  129 aaaggatgtattgccacatgggatggtacatgtatcaccactctt 173  Q
    ||| | ||||||||||||| || ||||| |||||||| |||||||    
T  26466949 aaaaggtgtattgccacatagggtggtaaatgtatcatcactctt 26466993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 33242523 - 33242595
Alignment:
Q  99 ttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
    ||||||| |||||| |||||||||||||||||  | ||||||||||||||||   ||||||||||||||||||    
T  33242523 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatgggggtgtacatgtatcaccactc 33242595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 173
Target Start/End: Original strand, 27441662 - 27441736
Alignment:
Q  99 ttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactctt 173  Q
    ||||||| |||||| ||||| |||||||||||  | ||||||||||||||||   ||||||||||||||||||||    
T  27441662 ttgccacatgtcaggattttatgtgggtgtaagaggtgtattgccacatgggtgtgtacatgtatcaccactctt 27441736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 172
Target Start/End: Original strand, 33254034 - 33254107
Alignment:
Q  99 ttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactct 172  Q
    ||||||| |||| | ||||||||||||| |||| | |||||||||||||||    |||||||||||||||||||    
T  33254034 ttgccacatgtccggattttgtgtgggtataaaaggtgtattgccacatggaggtgtacatgtatcaccactct 33254107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 145
Target Start/End: Complemental strand, 11427686 - 11427644
Alignment:
Q  104 acgtgtcagaattttgtgtgggtgt-aaaggatgtattgccac 145  Q
    |||||||||| |||||||||||||| |||||||||||||||||    
T  11427686 acgtgtcagatttttgtgtgggtgtcaaaggatgtattgccac 11427644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 145
Target Start/End: Original strand, 22880690 - 22880732
Alignment:
Q  104 acgtgtcagaattttgtgtgggtgt-aaaggatgtattgccac 145  Q
    ||||||||||||||||||||||||| ||||| |||||||||||    
T  22880690 acgtgtcagaattttgtgtgggtgtcaaagggtgtattgccac 22880732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 78
Target Start/End: Original strand, 27441591 - 27441641
Alignment:
Q  28 tatgtattagggatattttggtaagttaatctcacaaccacactttatctt 78  Q
    ||||||||| |||||||||||||| || |||||||||||| ||||| ||||    
T  27441591 tatgtattaaggatattttggtaaattcatctcacaaccatactttctctt 27441641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 147
Target Start/End: Complemental strand, 31109202 - 31109154
Alignment:
Q  99 ttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacat 147  Q
    ||||||| |||||| |||||||||||||||||  | |||||||||||||    
T  31109202 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacat 31109154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 115; Significance: 1e-58; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 21 - 179
Target Start/End: Original strand, 727 - 885
Alignment:
Q  21 tacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgt 120  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||    
T  727 tacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggagtccaggttgccacgtgtcagaattttgt 826  T
Q  121 gtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactctttaaaaa 179  Q
    ||||||||||||| |||||||||||||| | |||||||| ||||||| |||||| ||||    
T  827 gtgggtgtaaagggtgtattgccacatgaggtggtacatatatcaccgctcttttaaaa 885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 115; Significance: 1e-58; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 21 - 175
Target Start/End: Original strand, 112697 - 112851
Alignment:
Q  21 tacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgt 120  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||| ||||||||||||| ||||||||    
T  112697 tacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcaaaattttgt 112796  T
Q  121 gtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactcttta 175  Q
     |||||||||||| |||||||||||||||| |||||||||||||| |||||||||    
T  112797 atgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcactcttta 112851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 115; Significance: 1e-58; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 21 - 179
Target Start/End: Complemental strand, 36743541 - 36743383
Alignment:
Q  21 tacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgt 120  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||    
T  36743541 tacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcagaattttgt 36743442  T
Q  121 gtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactctttaaaaa 179  Q
     |||||||||| | |||||||||||||||| |||||||||||||| |||||| ||||||    
T  36743441 atgggtgtaaatggtgtattgccacatggggtggtacatgtatcatcactctataaaaa 36743383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 42197486 - 42197344
Alignment:
Q  28 tatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtg 127  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||| ||||||||||||| |||||||||||||||    
T  42197486 tatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcaaaattttgtgtgggtg 42197387  T
Q  128 taaaggatgtattgccacatgggatggtacatgtatcaccact 170  Q
    |||||| |||||||||||||||| |||||||||||||| ||||    
T  42197386 taaagggtgtattgccacatggggtggtacatgtatcatcact 42197344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 21 - 165
Target Start/End: Original strand, 11582808 - 11582952
Alignment:
Q  21 tacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgt 120  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||    
T  11582808 tacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcagaattttgt 11582907  T
Q  121 gtgggtgtaaaggatgtattgccacatgggatggtacatgtatca 165  Q
     |||||||||||| |||||||||||||| | ||||||||||||||    
T  11582908 atgggtgtaaagggtgtattgccacatgaggtggtacatgtatca 11582952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 21 - 173
Target Start/End: Complemental strand, 30660800 - 30660648
Alignment:
Q  21 tacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgt 120  Q
    |||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |    
T  30660800 tacaccctatgtattagggatattttggtaagttcatcttacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttat 30660701  T
Q  121 gtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactctt 173  Q
    |||| |||||||| ||||||||||||| ||||| ||||||||||| |||||||    
T  30660700 gtggatgtaaagggtgtattgccacataggatgatacatgtatcatcactctt 30660648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 21 - 171
Target Start/End: Original strand, 2547038 - 2547188
Alignment:
Q  21 tacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgt 120  Q
    ||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| |  ||| |||||||||||||||||||||||    
T  2547038 tacacctcatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttgt 2547137  T
Q  121 gtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
    ||||||||||||| ||||||||||||| || |||||||||||||| |||||    
T  2547138 gtgggtgtaaagggtgtattgccacatagggtggtacatgtatcatcactc 2547188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 29 - 165
Target Start/End: Complemental strand, 2166013 - 2165877
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    ||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||    
T  2166013 atgtattagagatattttggtaagttcatctcataaccacactttatcttctatttgtgtggggttcaggttgccacgtgtcagaattttgtgtgggtgt 2165914  T
Q  129 aaaggatgtattgccacatgggatggtacatgtatca 165  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  2165913 aaagggtgtattgtcacatgggatggtacatgtatca 2165877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 29 - 165
Target Start/End: Original strand, 29705412 - 29705548
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| | || ||| |||||||||||||||||||||||||||||||    
T  29705412 atgtattagggatattttgataagttcatctcacaaccacactttatcttctatttgtgcggggtccaagttgccacgtgtcagaattttgtgtgggtgt 29705511  T
Q  129 aaaggatgtattgccacatgggatggtacatgtatca 165  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  29705512 aaagggtgtattgccacatggggtggtacatgtatca 29705548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 21 - 171
Target Start/End: Original strand, 9241594 - 9241744
Alignment:
Q  21 tacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgt 120  Q
    |||||| ||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||| || |||||||||||||||||||||||||||    
T  9241594 tacaccctatatattagggatatttttgtaagttcatctcacaaccacactttatcttctatttatgtggggtccaggttgccacgtgtcagaattttgt 9241693  T
Q  121 gtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
    ||||||| ||||| ||| |||||||||||| |||||||||||||| |||||    
T  9241694 gtgggtgcaaagggtgtgttgccacatggggtggtacatgtatcatcactc 9241744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 21 - 174
Target Start/End: Original strand, 20148802 - 20148955
Alignment:
Q  21 tacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgt 120  Q
    ||||||| || ||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||| |  |||| |||||||||||||||||||| |    
T  20148802 tacacctcatatattagggatattttggtaagttcatctcacaaccacactttatcatctatttatgtgggatccagattgccacgtgtcagaattttat 20148901  T
Q  121 gtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactcttt 174  Q
    ||||||||||||| |||||||||||||||  |||||||||||||||||||||||    
T  20148902 gtgggtgtaaagggtgtattgccacatggtgtggtacatgtatcaccactcttt 20148955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 21 - 170
Target Start/End: Original strand, 26125677 - 26125825
Alignment:
Q  21 tacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgt 120  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| || |||| |||||||||||||||||||| |    
T  26125677 tacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttatgtg-ggtccagattgccacgtgtcagaattttat 26125775  T
Q  121 gtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccact 170  Q
    | ||||||||||| |||||||||||||||| |||||||| ||||||||||    
T  26125776 gcgggtgtaaagggtgtattgccacatggggtggtacatatatcaccact 26125825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 29 - 174
Target Start/End: Complemental strand, 30912612 - 30912467
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    ||||||||||| |||||||||||||| ||||||||||| ||| |||||||||||||||||| || | |||||||||||||||||||||||||||||||||    
T  30912612 atgtattaggggtattttggtaagttcatctcacaaccgcaccttatcttctatttgtgtggggtctaggttgccacgtgtcagaattttgtgtgggtgt 30912513  T
Q  129 aaaggatgtattgccacatgggatggtacatgtatcaccactcttt 174  Q
    ||||  |||||||||||||||| |||||||||||||| ||||||||    
T  30912512 aaagagtgtattgccacatggggtggtacatgtatcatcactcttt 30912467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 21 - 172
Target Start/End: Original strand, 45397358 - 45397508
Alignment:
Q  21 tacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgt 120  Q
    |||||| ||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||| |  |||| ||||||||||||||||||||||    
T  45397358 tacaccctatgtattagggatatttttgtaagttcatctcacaaccacaatttatcttctatttgtgtgggctccagattgccacgtgtcagaattttgt 45397457  T
Q  121 gtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactct 172  Q
    ||||||||||||| ||| |||||||||||| |||||||||||||| ||||||    
T  45397458 gtgggtgtaaagggtgtgttgccacatggg-tggtacatgtatcatcactct 45397508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 29 - 167
Target Start/End: Complemental strand, 29801000 - 29800862
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| || | || ||||||| |||||||||||| |||||||||    
T  29801000 atgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttatgtggggtcaagattgccacatgtcagaattttatgtgggtgt 29800901  T
Q  129 aaaggatgtattgccacatgggatggtacatgtatcacc 167  Q
    ||||| |||||||||||||||| ||||||||||||||||    
T  29800900 aaagggtgtattgccacatggggtggtacatgtatcacc 29800862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 29 - 171
Target Start/End: Original strand, 31384714 - 31384856
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||| ||||| |||    
T  31384714 atgtattaggaatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgctacgtgtcagaattttatgtggatgt 31384813  T
Q  129 aaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
    ||||| | |||||||||||||| |||||||| ||||| |||||    
T  31384814 aaagggtatattgccacatggggtggtacatatatcatcactc 31384856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 29 - 171
Target Start/End: Original strand, 42295245 - 42295386
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| || ||| |||||||| |||||||||||||||||| |||    
T  42295245 atgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttatgtg-ggtccaagttgccacatgtcagaattttgtgtggatgt 42295343  T
Q  129 aaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
    ||||| | ||||||||||| ||||||||||| ||||| |||||    
T  42295344 aaagggtatattgccacataggatggtacatttatcatcactc 42295386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 32 - 174
Target Start/End: Original strand, 1375595 - 1375737
Alignment:
Q  32 tattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgtaaa 131  Q
    |||||||||||||||||||| || |||||||||| |||||||||||||||||||||||  |  ||| ||||||||||| ||||| |||||||||||||||    
T  1375595 tattagggatattttggtaaatttatctcacaactacactttatcttctatttgtgtggagttcagattgccacgtgttagaatcttgtgtgggtgtaaa 1375694  T
Q  132 ggatgtattgccacatgggatggtacatgtatcaccactcttt 174  Q
    | |||||||| ||||| || |||||||||||||||||||||||    
T  1375695 gaatgtattgtcacatagggtggtacatgtatcaccactcttt 1375737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 32 - 148
Target Start/End: Original strand, 5754956 - 5755072
Alignment:
Q  32 tattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgtaaa 131  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |  ||| |||||||||||| |||||||||||||||||||||    
T  5754956 tattagggatattttggtaagttcatctcacaaccacactttatcttctatttatgtgggatccaagttgccacgtgttagaattttgtgtgggtgtaaa 5755055  T
Q  132 ggatgtattgccacatg 148  Q
    || ||||||||| ||||    
T  5755056 gggtgtattgccccatg 5755072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 19 - 171
Target Start/End: Original strand, 3743811 - 3743963
Alignment:
Q  19 tatacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaatttt 118  Q
    ||||||||  || ||||| | |||||||| |||||| ||||||||||||||||||||||||||||| |||  ||  ||| ||||||||||||||||||||    
T  3743811 tatacaccccatatattaagtatattttgataagttcatctcacaaccacactttatcttctatttatgtagggttcagattgccacgtgtcagaatttt 3743910  T
Q  119 gtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
     |||||||||||||| |||||||| ||||||| |||||||| ||||| |||||    
T  3743911 atgtgggtgtaaagggtgtattgctacatggggtggtacatatatcatcactc 3743963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 32 - 171
Target Start/End: Complemental strand, 40528681 - 40528542
Alignment:
Q  32 tattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgtaaa 131  Q
    ||||||||| |||||| ||| || |||||||||||||||||| ||||||||||||||| ||  || |||| ||| ||||| |||||||||||| ||||||    
T  40528681 tattagggacattttgataaatttatctcacaaccacactttctcttctatttgtgtggggttcaagttgtcacatgtcataattttgtgtggatgtaaa 40528582  T
Q  132 ggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
     ||| ||||| |||||| |   | ||||||||||||||||    
T  40528581 tgatatattgtcacatgagggtgcacatgtatcaccactc 40528542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 10678132 - 10678060
Alignment:
Q  99 ttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
    ||||||| |||||| |||||||||||||||||  ||||||||||||||||||   ||||||||||||||||||    
T  10678132 ttgccacatgtcaggattttgtgtgggtgtaagagatgtattgccacatgggggtgtacatgtatcaccactc 10678060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 75
Target Start/End: Original strand, 42699299 - 42699353
Alignment:
Q  21 tacaccttatgtattagggatattttggtaagttaatctcacaaccacactttat 75  Q
    |||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||    
T  42699299 tacaccttatgtattatggatatttttgtaagttcatctcacaaccacactttat 42699353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 173
Target Start/End: Original strand, 34304908 - 34304981
Alignment:
Q  99 ttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactctt 173  Q
    ||||||| |||||| ||||||| |||||||||  | |||||||||||||||| | ||||||||||||||||||||    
T  34304908 ttgccacatgtcaggattttgtttgggtgtaagaggtgtattgccacatggggt-gtacatgtatcaccactctt 34304981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 172
Target Start/End: Original strand, 35181636 - 35181709
Alignment:
Q  99 ttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactct 172  Q
    ||||||| |||||| |||||||||||||||||  | ||||||||||||||     |||||||||||||||||||    
T  35181636 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatgaaggtgtacatgtatcaccactct 35181709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 33629973 - 33629901
Alignment:
Q  99 ttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
    ||||||| ||||| |||||||||| |||||||  | ||||||||||||||||   |||||| |||||||||||    
T  33629973 ttgccacatgtcaaaattttgtgtaggtgtaagaggtgtattgccacatgggggtgtacatatatcaccactc 33629901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 32328870 - 32328815
Alignment:
Q  26 cttatgtattagggatattttggtaagttaatctcacaaccacactttatcttcta 81  Q
    |||||| |||||| ||||||||||||||| |||||||||| | ||||| |||||||    
T  32328870 cttatgcattaggaatattttggtaagtttatctcacaactatactttctcttcta 32328815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 18066768 - 18066719
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatctt 78  Q
    |||||||||||||||||| |||| || |||||||||||| ||||| ||||    
T  18066768 atgtattagggatattttagtaatttcatctcacaaccatactttctctt 18066719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 145
Target Start/End: Complemental strand, 32032795 - 32032751
Alignment:
Q  101 gccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccac 145  Q
    ||||| ||||||| |||||||||| ||| ||||||||||||||||    
T  32032795 gccacatgtcagatttttgtgtggatgtcaaggatgtattgccac 32032751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 115; Significance: 1e-58; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 21 - 175
Target Start/End: Original strand, 27550351 - 27550505
Alignment:
Q  21 tacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgt 120  Q
    ||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||| || |||||||||||||||||||||||||||    
T  27550351 tacacctcatgtattagggatattttggtaagttcatcttacaaccacactttatcttctatttatgtggggtccaggttgccacgtgtcagaattttgt 27550450  T
Q  121 gtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactcttta 175  Q
     |||||||||||| |||||||||||||||| |||||||||||||| |||||||||    
T  27550451 atgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcactcttta 27550505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 21 - 172
Target Start/End: Original strand, 23036022 - 23036173
Alignment:
Q  21 tacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgt 120  Q
    |||||| ||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||| || |||||||||||||||||||||||||||    
T  23036022 tacaccctatatattagggatatttttgtaagttcatctcacaaccacactttatcttctatttatgtggggtccaggttgccacgtgtcagaattttgt 23036121  T
Q  121 gtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactct 172  Q
    ||||||||||||||||| |||||||||||| |||||||||||||| ||||||    
T  23036122 gtgggtgtaaaggatgtgttgccacatggggtggtacatgtatcatcactct 23036173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 35 - 171
Target Start/End: Original strand, 35017788 - 35017924
Alignment:
Q  35 tagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgtaaagga 134  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||| |||||| ||    
T  35017788 tagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtggatgtaaaaga 35017887  T
Q  135 tgtattgccacatgggatggtacatgtatcaccactc 171  Q
    |||||||||||||||| |||||||||||||| |||||    
T  35017888 tgtattgccacatggggtggtacatgtatcatcactc 35017924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 21 - 171
Target Start/End: Original strand, 25051735 - 25051885
Alignment:
Q  21 tacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgt 120  Q
    |||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||| || ||| |||||||||||||||||||||||    
T  25051735 tacaccctatgtattagggatattttggtaagttcatctcacaatcacactttatcttctatttatgtggggtccaagttgccacgtgtcagaattttgt 25051834  T
Q  121 gtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
    |||| |||||| ||||||||||||| |||| |||||||||||||| |||||    
T  25051835 gtggatgtaaatgatgtattgccacgtggggtggtacatgtatcatcactc 25051885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 29 - 171
Target Start/End: Original strand, 33703191 - 33703333
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |  ||| |||||||||||||||||||||||||||||||    
T  33703191 atgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgcgggatccaagttgccacgtgtcagaattttgtgtgggtgt 33703290  T
Q  129 aaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
    ||||| |||||||||| ||||| |||||||||||||| |||||    
T  33703291 aaagggtgtattgccatatggggtggtacatgtatcatcactc 33703333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 32 - 173
Target Start/End: Complemental strand, 28982869 - 28982728
Alignment:
Q  32 tattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgtaaa 131  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| || ||| ||||||||||||||||||||||||||| ||||||    
T  28982869 tattagggatattttggtaagttcatctcacaaccgcactttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtggatgtaaa 28982770  T
Q  132 ggatgtattgccacatgggatggtacatgtatcaccactctt 173  Q
     | |||||||||||||||| |||||||||||||| |||||||    
T  28982769 aggtgtattgccacatggggtggtacatgtatcatcactctt 28982728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 28 - 171
Target Start/End: Complemental strand, 23204829 - 23204686
Alignment:
Q  28 tatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtg 127  Q
    ||||||||||||||||||| ||||||| || |||||||||||||||||||||||||| |||| || |||||||||||| |||||||||||| ||||||||    
T  23204829 tatgtattagggatatttttgtaagttcatgtcacaaccacactttatcttctatttatgtggggtccaggttgccacatgtcagaattttatgtgggtg 23204730  T
Q  128 taaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
    |||||||| ||||||||||||||||||||| ||||||| |||||    
T  23204729 taaaggatatattgccacatgggatggtacgtgtatcatcactc 23204686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 29 - 171
Target Start/End: Complemental strand, 27893892 - 27893750
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||| || | || ||||||| |||||||||||| |||||||||    
T  27893892 atgtattagggatattttggtaatttcatctcacaaccacactttatcttctatttatgtggggtcaagattgccacatgtcagaattttatgtgggtgt 27893793  T
Q  129 aaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
    ||||| |||||||||||||||| ||||||||||||||||||||    
T  27893792 aaagggtgtattgccacatggggtggtacatgtatcaccactc 27893750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 29 - 174
Target Start/End: Complemental strand, 1771316 - 1771171
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    ||||||||| ||||||||| |||||| |||||||||||||| |||||||||||||| |||| || ||| |||||||||| ||||||||||||||||||||    
T  1771316 atgtattagagatattttgataagttcatctcacaaccacattttatcttctatttatgtggggtccaagttgccacgtctcagaattttgtgtgggtgt 1771217  T
Q  129 aaaggatgtattgccacatgggatggtacatgtatcaccactcttt 174  Q
    ||||| |||||||||||||||| |||||||||||||| ||||||||    
T  1771216 aaagggtgtattgccacatggggtggtacatgtatcatcactcttt 1771171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 29 - 174
Target Start/End: Complemental strand, 55966396 - 55966251
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||| || | || ||||||| |||||||||||| |||||||||    
T  55966396 atgtattagggatattttggtaagttcatctcacaaccacaatttatcttctatttatgtggggtctagattgccacctgtcagaattttatgtgggtgt 55966297  T
Q  129 aaaggatgtattgccacatgggatggtacatgtatcaccactcttt 174  Q
    ||||| |||||||||||||||  |||||||||||||||||||||||    
T  55966296 aaagggtgtattgccacatggagtggtacatgtatcaccactcttt 55966251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 32 - 172
Target Start/End: Original strand, 31680955 - 31681095
Alignment:
Q  32 tattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgtaaa 131  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||   || |||||||||||||||||||| ||| ||||||||    
T  31680955 tattagggatattttggtaagttcatctcacaaccacactttatcttctatttatgtggggtttagattgccacgtgtcagaattttatgtaggtgtaaa 31681054  T
Q  132 ggatgtattgccacatgggatggtacatgtatcaccactct 172  Q
    || ||||||||||||||||||| ||||||||||||||||||    
T  31681055 gggtgtattgccacatgggatgctacatgtatcaccactct 31681095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 29 - 171
Target Start/End: Complemental strand, 43514736 - 43514594
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    ||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||| || | ||||||||||||||||||||||| ||||| |||    
T  43514736 atgtattagggttattttggtaagttcatctcacaaccacaccttatcttctatttgtgtggggtctaggttgccacgtgtcagaattttttgtggatgt 43514637  T
Q  129 aaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
    ||||  |||||||||||||||| |||||||||||||| |||||    
T  43514636 aaagagtgtattgccacatggggtggtacatgtatcatcactc 43514594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 29 - 173
Target Start/End: Original strand, 27864614 - 27864758
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||| ||  ||| || |||| |||||||||||| ||||| |||    
T  27864614 atgtattagggatattttggtaagttcatctcacaaccacactttattttctatttatgtggggttcagattaccacatgtcagaattttatgtggatgt 27864713  T
Q  129 aaaggatgtattgccacatgggatggtacatgtatcaccactctt 173  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||    
T  27864714 aaagggtgtattgccacatggggtggtacatgtatcaccactctt 27864758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 29 - 171
Target Start/End: Complemental strand, 51512315 - 51512173
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    ||||||||| |||||||||||||||| |||| | |||||||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||| |    
T  51512315 atgtattagagatattttggtaagttcatcttataaccacactttatcttttatttgtgtggggtccaggttgccacgtgtcagaattttgtgtgggtat 51512216  T
Q  129 aaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
     || ||||||||||||| |||| |||||||||||||| |||||    
T  51512215 taaagatgtattgccacgtggggtggtacatgtatcatcactc 51512173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 21 - 150
Target Start/End: Original strand, 39631143 - 39631272
Alignment:
Q  21 tacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgt 120  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||  ||   || ||||||||||||||||||    
T  39631143 tacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggttcaatatgtcacgtgtcagaattttgt 39631242  T
Q  121 gtgggtgtaaaggatgtattgccacatggg 150  Q
    ||||||||||||||||||||| ||||||||    
T  39631243 gtgggtgtaaaggatgtattgtcacatggg 39631272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 29 - 176
Target Start/End: Original strand, 43735792 - 43735939
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    ||||||||| ||||||||| |||||| ||||||||| |||||||||||||||||||||||| |  ||| |||| |||||||||||||||| ||||| |||    
T  43735792 atgtattagagatattttgataagttcatctcacaatcacactttatcttctatttgtgtgggatccaagttgtcacgtgtcagaattttatgtggatgt 43735891  T
Q  129 aaaggatgtattgccacatgggatggtacatgtatcaccactctttaa 176  Q
    ||||| ||||||||||| |||| |||||||||||||| ||||||||||    
T  43735892 aaagggtgtattgccacgtggggtggtacatgtatcatcactctttaa 43735939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 29 - 171
Target Start/End: Complemental strand, 43949851 - 43949709
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |  |||   ||||||||||||||||||||| ||||| |    
T  43949851 atgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgcgggatccaatatgccacgtgtcagaattttgtatgggtat 43949752  T
Q  129 aaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
    ||||| |||||||||| || || |||||||||||||| |||||    
T  43949751 aaagggtgtattgccaaatagggtggtacatgtatcatcactc 43949709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 21 - 185
Target Start/End: Complemental strand, 45490371 - 45490207
Alignment:
Q  21 tacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgt 120  Q
    ||||||| |||||||||||||| ||| |||| || |||||||||||||||||||||||||||||||  | |  |||||||||||||||||||||| ||||    
T  45490371 tacacctcatgtattagggatactttagtaaattcatctcacaaccacactttatcttctatttgtacgggatccaggttgccacgtgtcagaatcttgt 45490272  T
Q  121 gtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactctttaaaaatatact 185  Q
    ||||||||||| ||| ||||||||||| || |  |||||||||||||  || | |||||||||||    
T  45490271 gtgggtgtaaatgatatattgccacatagggtactacatgtatcaccgatcataaaaaatatact 45490207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 29 - 168
Target Start/End: Complemental strand, 48463500 - 48463361
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||| |||||||| |||| ||  ||| || |||| |||||||||||| |||||||||    
T  48463500 atgtattagggatattttggtaagttcatctcacaaccatactttattttctatttatgtggggttcagattaccacatgtcagaattttatgtgggtgt 48463401  T
Q  129 aaaggatgtattgccacatgggatggtacatgtatcacca 168  Q
    ||||| ||||||||||||| |  |||||||||||||||||    
T  48463400 aaagggtgtattgccacatagagtggtacatgtatcacca 48463361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 21687046 - 21687200
Alignment:
Q  19 tatacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaatttt 118  Q
    |||||| ||||||||||||  ||||||| ||||||| |||||| ||||| |||||||||||||||||| ||  |  ||||||||||||||||||||||||    
T  21687046 tatacatcttatgtattagaaatattttagtaagttcatctcataaccatactttatcttctatttgtctggagttcaggttgccacgtgtcagaatttt 21687145  T
Q  119 gtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactctt 173  Q
    |||||  ||||||| |||||||||||||| || |||||||| ||||| |||||||    
T  21687146 gtgtgaatgtaaagaatgtattgccacataggttggtacatatatcatcactctt 21687200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 19 - 172
Target Start/End: Complemental strand, 27316773 - 27316619
Alignment:
Q  19 tatacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaa-ttt 117  Q
    ||||||||  |||||||| ||||||||||||||||| |||||| |||||||||||||||||||||| | ||  | ||| ||||||||||||||||| |||    
T  27316773 tatacaccccatgtattaaggatattttggtaagttcatctcataaccacactttatcttctatttatttggagtccaagttgccacgtgtcagaatttt 27316674  T
Q  118 tgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactct 172  Q
    ||||||| |||||||| ||||||| ||||||||||| || |||||||| ||||||    
T  27316673 tgtgtggatgtaaagggtgtattgtcacatgggatgataaatgtatcatcactct 27316619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 29 - 165
Target Start/End: Original strand, 12497006 - 12497142
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    ||||||||| |||||||||||||||| |||| |||| |||||||||||||||||||||||| ||  ||  ||||||||||| ||||||||||||||||||    
T  12497006 atgtattagagatattttggtaagttcatcttacaatcacactttatcttctatttgtgtgaggttcaatttgccacgtgttagaattttgtgtgggtgt 12497105  T
Q  129 aaaggatgtattgccacatgggatggtacatgtatca 165  Q
    |||   ||||||| |||||||| |||| |||||||||    
T  12497106 aaaacgtgtattgtcacatggggtggtgcatgtatca 12497142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 33 - 132
Target Start/End: Original strand, 41878460 - 41878559
Alignment:
Q  33 attagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgtaaag 132  Q
    ||||||||||||||| |||||| |||||||||||| || || ||||||||||||||| || |||| ||| |||||||||||||||||||| |||||||||    
T  41878460 attagggatattttgataagttcatctcacaaccaaaccttctcttctatttgtgtggggtccagattgtcacgtgtcagaattttgtgttggtgtaaag 41878559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 56215948 - 56215805
Alignment:
Q  28 tatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtg 127  Q
    |||| ||||| |||||||||| || || |||||||||||||||||| ||| ||||||||||| || | ||||||| |  |||||||||||||||||||||    
T  56215948 tatgcattagcgatattttggaaaatttatctcacaaccacactttctct-ctatttgtgtggggtctaggttgctatatgtcagaattttgtgtgggtg 56215850  T
Q  128 taaaggatgtattgccacatgggatggtacatgtatcaccactct 172  Q
    |||  | ||||| |||||||||    |||||||||||||||||||    
T  56215849 taagaggtgtatggccacatggtggtgtacatgtatcaccactct 56215805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 35 - 174
Target Start/End: Original strand, 28988529 - 28988667
Alignment:
Q  35 tagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgtaaagga 134  Q
    |||||| |||||| ||| || |||||| ||||||||||| ||||||||||||||| || |||||||||||  |||||||||||||| || | |||| ||     
T  28988529 tagggacattttgataaattcatctcataaccacactttctcttctatttgtgtggggtccaggttgccatatgtcagaattttgtatgag-gtaagggg 28988627  T
Q  135 tgtattgccacatgggatggtacatgtatcaccactcttt 174  Q
    ||||||| |||||| |   |||||||||||||||||||||    
T  28988628 tgtattgtcacatgagggtgtacatgtatcaccactcttt 28988667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 41327601 - 41327478
Alignment:
Q  21 tacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgt 120  Q
    ||||||||||| | || ||| |||||||||| || |||||||| ||||||||| ||||| ||||||||| || |||||||||||| ||| |||||||| |    
T  41327601 tacaccttatgcactacggacattttggtaaattcatctcacatccacactttctcttcaatttgtgtggggtccaggttgccacatgttagaatttttt 41327502  T
Q  121 gtgggtgtaaaggatgtattgcca 144  Q
    ||| |||||| || ||||||||||    
T  41327501 gtgagtgtaaggggtgtattgcca 41327478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 33 - 166
Target Start/End: Original strand, 41848025 - 41848158
Alignment:
Q  33 attagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgtaaag 132  Q
    ||||| || ||||||| || || ||| |||||||||||||| ||||||||||||||| ||  ||| ||| ||| ||||||||||||| |||| ||||| |    
T  41848025 attagagacattttggcaaattcatcgcacaaccacactttctcttctatttgtgtggggttcagattgtcacatgtcagaattttgcgtggatgtaagg 41848124  T
Q  133 gatgtattgccacatgggatggtacatgtatcac 166  Q
    | ||||||||||||||||   |||||||||||||    
T  41848125 ggtgtattgccacatgggggtgtacatgtatcac 41848158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 32 - 131
Target Start/End: Complemental strand, 46412516 - 46412417
Alignment:
Q  32 tattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgtaaa 131  Q
    |||||| ||||||||||||||||  |||||||||||||||||||||||||||| |||| ||   |  |||||||||||||||||||||||| | ||||||    
T  46412516 tattagagatattttggtaagttcttctcacaaccacactttatcttctatttatgtggggtttaaattgccacgtgtcagaattttgtgtagatgtaaa 46412417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 99 - 172
Target Start/End: Original strand, 19880074 - 19880147
Alignment:
Q  99 ttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactct 172  Q
    ||||||| |||||| |||||||||||||||||  | ||||||||||||||||   |||||||||||||||||||    
T  19880074 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatgggggtgtacatgtatcaccactct 19880147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 48435559 - 48435487
Alignment:
Q  99 ttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
    ||||||| |||||| |||||||||||||||||  ||||||||| ||||||||   ||||||||||||||||||    
T  48435559 ttgccacatgtcaggattttgtgtgggtgtaagagatgtattgtcacatgggggtgtacatgtatcaccactc 48435487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 55272356 - 55272284
Alignment:
Q  99 ttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
    ||||||| |||||| |||||||||||||||||  | ||||||||||||||||   ||||||||||||||||||    
T  55272356 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatgggggtgtacatgtatcaccactc 55272284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 99 - 174
Target Start/End: Complemental strand, 46827686 - 46827611
Alignment:
Q  99 ttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactcttt 174  Q
    ||||||| |||||| |||||||||||||||||  |||||||| ||||||||    |||||||||||||||||||||    
T  46827686 ttgccacatgtcaggattttgtgtgggtgtaagagatgtatttccacatggaggtgtacatgtatcaccactcttt 46827611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 172
Target Start/End: Complemental strand, 3756232 - 3756159
Alignment:
Q  99 ttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactct 172  Q
    ||||||| |||||  ||||| |||||||||||  | |||||||||||||||||  |||||||||||||||||||    
T  3756232 ttgccacatgtcatgattttatgtgggtgtaagagttgtattgccacatgggagtgtacatgtatcaccactct 3756159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 170
Target Start/End: Original strand, 35037125 - 35037195
Alignment:
Q  99 ttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccact 170  Q
    ||||||| |||||| |||||||||||||||||  | ||||||||||||| |||  |||||||||||||||||    
T  35037125 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacat-ggagtgtacatgtatcaccact 35037195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 99 - 173
Target Start/End: Complemental strand, 17619132 - 17619058
Alignment:
Q  99 ttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactctt 173  Q
    ||||||| |||||| |||||||||||||||||  | ||||||||||  ||||   ||||||||||||||||||||    
T  17619132 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccaggtggggatgtacatgtatcaccactctt 17619058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 167
Target Start/End: Original strand, 712080 - 712148
Alignment:
Q  99 ttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcacc 167  Q
    ||||||| |||||| |||||||||||||||||  | |||||||||||||||    ||||||||||||||    
T  712080 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatggaggtgtacatgtatcacc 712148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 38851633 - 38851708
Alignment:
Q  99 ttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactcttt 174  Q
    ||||||| |||||| ||||||||||| |||||  ||||||||||||||||     || ||||||||||||||||||    
T  38851633 ttgccacatgtcaggattttgtgtggatgtaagagatgtattgccacatgaaggtgtgcatgtatcaccactcttt 38851708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 36004096 - 36004027
Alignment:
Q  99 ttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
    ||||||| | ||| |||||||| || ||||||  |||||||||||||||||   |||||||||||||||||||    
T  36004096 ttgccacatatcaaaattttgtttgagtgtaagagatgtattgccacatgg---ggtacatgtatcaccactc 36004027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 145
Target Start/End: Original strand, 42044399 - 42044441
Alignment:
Q  104 acgtgtcagaattttgtgtgggtgta-aaggatgtattgccac 145  Q
    |||||||||| ||||||||||||||| ||||||||||||||||    
T  42044399 acgtgtcagatttttgtgtgggtgtacaaggatgtattgccac 42044441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 114 - 175
Target Start/End: Original strand, 32728492 - 32728553
Alignment:
Q  114 attttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactcttta 175  Q
    ||||| |||| ||||||  | ||||||||||||||||   ||||||||||||||||||||||    
T  32728492 attttttgtgcgtgtaagaggtgtattgccacatgggggtgtacatgtatcaccactcttta 32728553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 145
Target Start/End: Original strand, 50526201 - 50526245
Alignment:
Q  102 ccacgtgtcagaattttgtgtgggtgt-aaaggatgtattgccac 145  Q
    |||||||||||| |||||||||||||| ||||| |||||||||||    
T  50526201 ccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 50526245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 115; Significance: 1e-58; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 21 - 175
Target Start/End: Original strand, 19047199 - 19047353
Alignment:
Q  21 tacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgt 120  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||| ||||||||||||| ||||||||    
T  19047199 tacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcaaaattttgt 19047298  T
Q  121 gtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactcttta 175  Q
     |||||||||||| |||||||||||||||| |||||||||||||| |||||||||    
T  19047299 atgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcactcttta 19047353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 29 - 173
Target Start/End: Original strand, 30838682 - 30838826
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||    
T  30838682 atgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtgtaggtgt 30838781  T
Q  129 aaaggatgtattgccacatgggatggtacatgtatcaccactctt 173  Q
    ||| | |||||||||||||||| |||||||||||||| |||||||    
T  30838782 aaaaggtgtattgccacatggggtggtacatgtatcatcactctt 30838826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 21 - 180
Target Start/End: Original strand, 1750456 - 1750615
Alignment:
Q  21 tacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgt 120  Q
    |||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||    
T  1750456 tacaccctatgtattagggatatttttgtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcagaattttgt 1750555  T
Q  121 gtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactctttaaaaat 180  Q
    ||| ||||||||| ||| |||||||||||| |||||||  ||||| ||||| ||||||||    
T  1750556 gtgagtgtaaagggtgtgttgccacatggggtggtacaaatatcatcactccttaaaaat 1750615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 29 - 170
Target Start/End: Complemental strand, 42849908 - 42849768
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||| || ||| |||||||||||||||||||||||||||||||    
T  42849908 atgtattagggatattttgataagttcatctcacaaccacactttat-ttctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtgggtgt 42849810  T
Q  129 aaaggatgtattgccacatgggatggtacatgtatcaccact 170  Q
    ||||| |||||||||||||||| |||||||||||||| ||||    
T  42849809 aaagggtgtattgccacatggggtggtacatgtatcatcact 42849768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 21 - 165
Target Start/End: Complemental strand, 12302311 - 12302167
Alignment:
Q  21 tacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgt 120  Q
    |||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||| || ||||||| ||| |||||||||||||||    
T  12302311 tacaccctatgtattagggatatttttgtaagttcatctcacaaccacactttatcttctatttatgtggggtccaggttaccatgtgtcagaattttgt 12302212  T
Q  121 gtgggtgtaaaggatgtattgccacatgggatggtacatgtatca 165  Q
    |||| ||||||||||||||||||||||||| || |||||||||||    
T  12302211 gtggatgtaaaggatgtattgccacatggggtgatacatgtatca 12302167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 28 - 174
Target Start/End: Complemental strand, 43490452 - 43490306
Alignment:
Q  28 tatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtg 127  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| |||| || |||| |||||||||||||||||||||| ||||||    
T  43490452 tatgtattagggatattttggtaagttcatctcataaccacactttatcttctatttatgtggggtccagattgccacgtgtcagaattttgtatgggtg 43490353  T
Q  128 taaaggatgtattgccacatgggatggtacatgtatcaccactcttt 174  Q
    |||||| |||||||||||||| | ||||||||||| || ||||||||    
T  43490352 taaagggtgtattgccacatgaggtggtacatgtagcatcactcttt 43490306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 40 - 179
Target Start/End: Complemental strand, 4764765 - 4764626
Alignment:
Q  40 atattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgtaaaggatgtat 139  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||||| | |||||    
T  4764765 atattttggtaaattcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtgtggatgtaaaaggtgtat 4764666  T
Q  140 tgccacatgggatggtacatgtatcaccactctttaaaaa 179  Q
    ||||||||| | |||||||||||||| |||||| ||||||    
T  4764665 tgccacatgaggtggtacatgtatcatcactctataaaaa 4764626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 29 - 171
Target Start/End: Complemental strand, 43335813 - 43335671
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||| |  ||||||||||||||||||||||||||||||| |||    
T  43335813 atgtattagggatattttggtaagttcatctcacaactacactttatcttctatttatgtgggatccaggttgccacgtgtcagaattttgtgtggatgt 43335714  T
Q  129 aaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
    ||| | | |||||||||||||| |||||||||||||| |||||    
T  43335713 aaaaggtatattgccacatggggtggtacatgtatcatcactc 43335671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 171
Target Start/End: Original strand, 16096787 - 16096940
Alignment:
Q  19 tatacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggccc-aggttgccacgtgtcagaattt 117  Q
    ||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||| || |||| ||  | | ||||||||||||||||||||    
T  16096787 tatacaccccatgtattagggatattttggtgagttaatctcacaaccacactttatcttctacttatgtgggggtctaagttgccacgtgtcagaattt 16096886  T
Q  118 tgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
    |||||||||||||||| ||||||||||||||   |||||||||||||| |||||    
T  16096887 tgtgtgggtgtaaagggtgtattgccacatgatgtggtacatgtatcatcactc 16096940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 39149343 - 39149201
Alignment:
Q  28 tatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtg 127  Q
    |||||||||| |||||||||||||||| ||| |||||| |||||||||||| |||||||||| || | |  || |||||| ||| |||||||||||||||    
T  39149343 tatgtattagagatattttggtaagttcatcccacaactacactttatcttttatttgtgtg-ggtctaaattaccacgtctcataattttgtgtgggtg 39149245  T
Q  128 taaaggatgtattgccacatgggatggtacatgtatcaccactct 172  Q
    |||| | |||||| ||||||||| |||||||||||||| ||||||    
T  39149244 taaaaggtgtattaccacatggg-tggtacatgtatcatcactct 39149201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 42 - 176
Target Start/End: Complemental strand, 34817813 - 34817679
Alignment:
Q  42 attttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattg 141  Q
    |||||||||| || |||||||||||||||||| ||||||||||||  | |  |||||||||||| |||||||||||||| ||||||||| ||  | ||||    
T  34817813 attttggtaaattcatctcacaaccacactttctcttctatttgtacgggatccaggttgccacatgtcagaattttgtatgggtgtaaggggagcattg 34817714  T
Q  142 ccacatgggatggtacatgtatcaccactctttaa 176  Q
    |||||||||   |||||||||||| ||||||||||    
T  34817713 ccacatgggggtgtacatgtatcatcactctttaa 34817679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 33 - 138
Target Start/End: Complemental strand, 13780781 - 13780676
Alignment:
Q  33 attagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgtaaag 132  Q
    ||||||||||||||| ||| || |||||||||||||||||| |||||||||| |||| || |||||||||||| |||||||||||||| | |||||||||    
T  13780781 attagggatattttgataaattcatctcacaaccacactttctcttctatttatgtggggtccaggttgccacatgtcagaattttgtataggtgtaaag 13780682  T
Q  133 gatgta 138  Q
    | ||||    
T  13780681 ggtgta 13780676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 33 - 149
Target Start/End: Original strand, 42026823 - 42026939
Alignment:
Q  33 attagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgtaaag 132  Q
    |||||||||||||||| || || |||||||||| ||||||| | ||||||||||||| || | ||||||| |  |||||||||||||||||||||||| |    
T  42026823 attagggatattttggcaaattcatctcacaactacactttcttttctatttgtgtggggtctaggttgcaagatgtcagaattttgtgtgggtgtaagg 42026922  T
Q  133 gatgtattgccacatgg 149  Q
    | |||||||||||||||    
T  42026923 ggtgtattgccacatgg 42026939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 120
Target Start/End: Complemental strand, 8896627 - 8896542
Alignment:
Q  35 tagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgt 120  Q
    |||| |||||||||||| || ||||||||| |||||||| | ||||||||||||| ||  ||||||||||| ||||||||||||||    
T  8896627 taggaatattttggtaaattcatctcacaatcacactttcttttctatttgtgtgaggttcaggttgccacatgtcagaattttgt 8896542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 99 - 174
Target Start/End: Complemental strand, 34895721 - 34895646
Alignment:
Q  99 ttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactcttt 174  Q
    ||||||| |||||| |||||||||||||||||  | ||||||||||||||||   |||||||||||||||||||||    
T  34895721 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatgggggtgtacatgtatcaccactcttt 34895646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 11825634 - 11825562
Alignment:
Q  99 ttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
    ||||||| |||||| |||||||||||||||||  | ||||||||||||||||   ||||||||||||||||||    
T  11825634 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatggggatgtacatgtatcaccactc 11825562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 171
Target Start/End: Complemental strand, 12415432 - 12415368
Alignment:
Q  107 tgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
    |||||||||||||||||| |||||  | |||||||||||||||||  ||||||||||||||||||    
T  12415432 tgtcagaattttgtgtggatgtaagaggtgtattgccacatgggagtgtacatgtatcaccactc 12415368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 171
Target Start/End: Complemental strand, 12427492 - 12427428
Alignment:
Q  107 tgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
    |||||||||||||||||| |||||  | |||||||||||||||||  ||||||||||||||||||    
T  12427492 tgtcagaattttgtgtggatgtaagaggtgtattgccacatgggagtgtacatgtatcaccactc 12427428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 99 - 174
Target Start/End: Complemental strand, 6518474 - 6518399
Alignment:
Q  99 ttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactcttt 174  Q
    ||||||| |||||| |||||||||||||||||| | ||||||| |||||||    |||||||||||||||||||||    
T  6518474 ttgccacatgtcaggattttgtgtgggtgtaaaaggtgtattgacacatggaggtgtacatgtatcaccactcttt 6518399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 18491825 - 18491900
Alignment:
Q  99 ttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactcttt 174  Q
    ||||||| ||| || |||||||||||||||||  | ||||||||||||||||   |||||||||||||||||||||    
T  18491825 ttgccacatgttaggattttgtgtgggtgtaagaggtgtattgccacatgggggtgtacatgtatcaccactcttt 18491900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 99 - 174
Target Start/End: Complemental strand, 41281954 - 41281879
Alignment:
Q  99 ttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactcttt 174  Q
    ||||||| |||||| |||||||||||||||||  | |||||||||| |||||   |||||||||||||||||||||    
T  41281954 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccatatgggggtgtacatgtatcaccactcttt 41281879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 966814 - 966742
Alignment:
Q  99 ttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
    ||||||| |||||| |||||||||||||||||  | |||||| |||||||||   ||||||||||||||||||    
T  966814 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtatttccacatggggatgtacatgtatcaccactc 966742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 4299400 - 4299328
Alignment:
Q  99 ttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
    ||||||| |||||| |||||||||||||||||  ||||||||||||||||     ||||||||||||||||||    
T  4299400 ttgccacatgtcaggattttgtgtgggtgtaagagatgtattgccacatgaaggtgtacatgtatcaccactc 4299328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 43114677 - 43114749
Alignment:
Q  99 ttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
    ||||||| |||||| |||||||||||||||||  | |||||||||||||| |   ||||||||||||||||||    
T  43114677 ttgccacttgtcaggattttgtgtgggtgtaagaggtgtattgccacatgagggtgtacatgtatcaccactc 43114749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 4452008 - 4451951
Alignment:
Q  21 tacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatctt 78  Q
    |||||| |||| ||||||||||||||||||| || |||||||||||| ||||| ||||    
T  4452008 tacaccatatgcattagggatattttggtaaattcatctcacaaccatactttctctt 4451951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 16804088 - 16804160
Alignment:
Q  99 ttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
    ||||||| ||||||||||||||||||||||||  | ||||||| || || ||   ||||||||||||||||||    
T  16804088 ttgccacatgtcagaattttgtgtgggtgtaagaggtgtattgtcatataggggtgtacatgtatcaccactc 16804160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 16843370 - 16843442
Alignment:
Q  99 ttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
    ||||||| ||||||||||||||||||||||||  | ||||||| || || ||   ||||||||||||||||||    
T  16843370 ttgccacatgtcagaattttgtgtgggtgtaagaggtgtattgtcatataggggtgtacatgtatcaccactc 16843442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 174
Target Start/End: Complemental strand, 12531643 - 12531568
Alignment:
Q  99 ttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactcttt 174  Q
    ||||||| |||||| |||||||||||||||||  | |||||||||| ||||    |||||||||||| ||||||||    
T  12531643 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccatatggaggtgtacatgtatcatcactcttt 12531568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 145
Target Start/End: Original strand, 40613931 - 40613976
Alignment:
Q  101 gccacgtgtcagaattttgtgtgggtgt-aaaggatgtattgccac 145  Q
    ||||||||||||| |||||||||||||| ||||| |||||||||||    
T  40613931 gccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 40613976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 33229352 - 33229396
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacacttt 73  Q
    |||||||||||||||||||||||||| |||  |||| ||||||||    
T  33229352 atgtattagggatattttggtaagttcatcatacaatcacacttt 33229396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 115; Significance: 1e-58; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 21 - 171
Target Start/End: Original strand, 5489818 - 5489968
Alignment:
Q  21 tacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgt 120  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||| |    
T  5489818 tacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttat 5489917  T
Q  121 gtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
    ||||||||||||| |||||||||||||||| |||||||||||||| |||||    
T  5489918 gtgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcactc 5489968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 21 - 171
Target Start/End: Complemental strand, 48499020 - 48498870
Alignment:
Q  21 tacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgt 120  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||| |    
T  48499020 tacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttat 48498921  T
Q  121 gtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
    ||||||||||||| |||||||||||||||| |||||||||||||| |||||    
T  48498920 gtgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcactc 48498870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 29 - 171
Target Start/End: Complemental strand, 43571136 - 43570994
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||| |||||||||    
T  43571136 atgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttatgtgggtgt 43571037  T
Q  129 aaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
    ||||| |||||||||||||||| |||||||| ||||| |||||    
T  43571036 aaagggtgtattgccacatggggtggtacatatatcatcactc 43570994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 29 - 174
Target Start/End: Original strand, 7447875 - 7448020
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    ||||||||  ||||||||| |||||| |||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||    
T  7447875 atgtattacagatattttgataagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtgggtgt 7447974  T
Q  129 aaaggatgtattgccacatgggatggtacatgtatcaccactcttt 174  Q
    ||||| ||||||||||||||| ||||||||||||||| ||||||||    
T  7447975 aaagggtgtattgccacatggaatggtacatgtatcatcactcttt 7448020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 28 - 171
Target Start/End: Complemental strand, 23989574 - 23989431
Alignment:
Q  28 tatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtg 127  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||| |||||||||||    
T  23989574 tatgtattagggatattttggtaaatttatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaatcttgtgtgggtg 23989475  T
Q  128 taaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
    |||||| |||||||||| || || ||||||||||||||||||||    
T  23989474 taaagggtgtattgccatatagggtggtacatgtatcaccactc 23989431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 21 - 172
Target Start/End: Complemental strand, 50448318 - 50448167
Alignment:
Q  21 tacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgt 120  Q
    |||||||||||||||||||||||||| ||||||| |||| ||||||||| |||||||||||||| |||| |  ||| |||||||||||||||||||||||    
T  50448318 tacaccttatgtattagggatatttttgtaagttcatcttacaaccacattttatcttctatttttgtgggttccatgttgccacgtgtcagaattttgt 50448219  T
Q  121 gtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactct 172  Q
    ||||||||||||| |||||||||||||||| |||||||||||||| ||||||    
T  50448218 gtgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcactct 50448167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 29 - 174
Target Start/End: Complemental strand, 750355 - 750210
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    |||||| |||||||||||| ||| || |||||| ||||||||||||||||||||||||||| || ||| ||| |||||||||||||||||||||||||||    
T  750355 atgtatcagggatattttgataaattcatctcaaaaccacactttatcttctatttgtgtggggtccatgttaccacgtgtcagaattttgtgtgggtgt 750256  T
Q  129 aaaggatgtattgccacatgggatggtacatgtatcaccactcttt 174  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||    
T  750255 aaagggtgtattgccacatgggatggtacatgtatcatcactcttt 750210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 29 - 173
Target Start/End: Complemental strand, 24769549 - 24769405
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    ||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||| |||    
T  24769549 atgtattagggatattttggtaagttcttatcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtggatgt 24769450  T
Q  129 aaaggatgtattgccacatgggatggtacatgtatcaccactctt 173  Q
    ||||  |||||||||||||||| |||||||||||||| |||||||    
T  24769449 aaagagtgtattgccacatggggtggtacatgtatcatcactctt 24769405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 29 - 172
Target Start/End: Original strand, 4401378 - 4401521
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| || |||   |||||||||||||||||||||||||||||    
T  4401378 atgtattagagatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaatatgccacgtgtcagaattttgtgtgggtgt 4401477  T
Q  129 aaaggatgtattgccacatgggatggtacatgtatcaccactct 172  Q
    ||||| ||||||||||||| || |||||||||||||| ||||||    
T  4401478 aaagggtgtattgccacatagggtggtacatgtatcatcactct 4401521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 29 - 170
Target Start/End: Original strand, 37814828 - 37814969
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    |||||||| |||||||||||||| || || |||||||||||||||||||||||||| |||| || |||| |||||||||||||||||||| | ||| |||    
T  37814828 atgtattaaggatattttggtaaattcatttcacaaccacactttatcttctatttatgtggggtccagattgccacgtgtcagaattttatatggatgt 37814927  T
Q  129 aaaggatgtattgccacatgggatggtacatgtatcaccact 170  Q
    ||||| |||||||||||||||| |||||||||||||||||||    
T  37814928 aaagggtgtattgccacatggggtggtacatgtatcaccact 37814969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 29 - 172
Target Start/End: Original strand, 4888093 - 4888235
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||  | |||  |||||| || |||||||||||||||| |||    
T  4888093 atgtattagggatattttggtaagtttatctcacaaccacactttattttctatttgtgtggtgtccaaattgccatgtatcagaattttgtgtggatgt 4888192  T
Q  129 aaaggatgtattgccacatgggatggtacatgtatcaccactct 172  Q
    ||||||| |||||||||||||| |||||||||||||| ||||||    
T  4888193 aaaggatatattgccacatggg-tggtacatgtatcatcactct 4888235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 32 - 172
Target Start/End: Complemental strand, 2497609 - 2497469
Alignment:
Q  32 tattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgtaaa 131  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||| ||||||| |||| |  |||| ||| |||||||||||||||| ||||||| ||||    
T  2497609 tattaaggatattttggtaagttcatctcacaaccacactttatcatctatttatgtgggatccagattgtcacgtgtcagaattttatgtgggtataaa 2497510  T
Q  132 ggatgtattgccacatgggatggtacatgtatcaccactct 172  Q
    || |||||||||||||||  |||||||||||||||||||||    
T  2497509 gggtgtattgccacatggtgtggtacatgtatcaccactct 2497469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 26585582 - 26585658
Alignment:
Q  99 ttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactcttta 175  Q
    ||||||| |||||| ||||||||||| |||||  ||||||||||| ||||||   ||||||||||||||||||||||    
T  26585582 ttgccacatgtcaggattttgtgtggatgtaagagatgtattgccgcatgggggtgtacatgtatcaccactcttta 26585658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 35000093 - 35000021
Alignment:
Q  99 ttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
    ||||||| |||||| ||||||| |||||||||  ||||||||||||||||||   ||||||||||||||||||    
T  35000093 ttgccacatgtcaggattttgtatgggtgtaagagatgtattgccacatgggggtgtacatgtatcaccactc 35000021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 44112797 - 44112873
Alignment:
Q  99 ttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactcttta 175  Q
    ||||||| ||||||||||||||||||||||||  | ||||||||||||||     ||||||||||||||||||||||    
T  44112797 ttgccacatgtcagaattttgtgtgggtgtaagaggtgtattgccacatgaaggtgtacatgtatcaccactcttta 44112873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 35003414 - 35003489
Alignment:
Q  99 ttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactcttt 174  Q
    ||||||| |||||| |||||||||||||||||  | ||||||||||||||||   || ||||||||||||||||||    
T  35003414 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatgggggtgtgcatgtatcaccactcttt 35003489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 45705945 - 45706017
Alignment:
Q  99 ttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
    ||||||| |||||| |||||||||||||||||  | |||||||||||||||    ||||||||||||||||||    
T  45705945 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatggaggtgtacatgtatcaccactc 45706017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 150
Target Start/End: Original strand, 46168503 - 46168554
Alignment:
Q  99 ttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatggg 150  Q
    ||||||| ||||| ||||||||||||||||||  ||||||||||||||||||    
T  46168503 ttgccacatgtcataattttgtgtgggtgtaagagatgtattgccacatggg 46168554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 168
Target Start/End: Original strand, 48119748 - 48119817
Alignment:
Q  99 ttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcacca 168  Q
    ||||||| |||||| |||||||||||||||||  | ||||||||||| ||||   |||||||||||||||    
T  48119748 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacgtgggggtgtacatgtatcacca 48119817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 45639712 - 45639640
Alignment:
Q  99 ttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
    ||||||| ||| || |||||||||||||||||  | |||||||||||| |||   ||||||||||||||||||    
T  45639712 ttgccacatgttaggattttgtgtgggtgtaagaggtgtattgccacaagggggtgtacatgtatcaccactc 45639640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 174
Target Start/End: Complemental strand, 38113175 - 38113100
Alignment:
Q  99 ttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactcttt 174  Q
    ||||||| |||||| |||||||||||||||||  | ||||||| |||||||    ||||||| |||||||||||||    
T  38113175 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgtcacatggaggtgtacatgaatcaccactcttt 38113100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 172
Target Start/End: Complemental strand, 45427722 - 45427652
Alignment:
Q  102 ccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactct 172  Q
    |||| |||||| ||||||||||| || ||  | ||||||||||||||||   |||||||||||||||||||    
T  45427722 ccacatgtcaggattttgtgtggatggaagaggtgtattgccacatggggatgtacatgtatcaccactct 45427652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 99 - 172
Target Start/End: Original strand, 41065271 - 41065344
Alignment:
Q  99 ttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactct 172  Q
    ||||||| |||||| |||||||| || |||||  | ||||||||||||||||   |||||| ||||||||||||    
T  41065271 ttgccacatgtcaggattttgtgcggatgtaagaggtgtattgccacatgggggtgtacatatatcaccactct 41065344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 145
Target Start/End: Complemental strand, 32813317 - 32813273
Alignment:
Q  102 ccacgtgtcagaattttgtgtgggtg-taaaggatgtattgccac 145  Q
    |||||||||||| ||||||||||||| |||||| |||||||||||    
T  32813317 ccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccac 32813273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 111; Significance: 3e-56; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 21 - 167
Target Start/End: Original strand, 5015437 - 5015583
Alignment:
Q  21 tacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgt 120  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||    
T  5015437 tacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttgt 5015536  T
Q  121 gtgggtgtaaaggatgtattgccacatgggatggtacatgtatcacc 167  Q
    ||| ||||||| | |||||||||||||||| ||||||||||||||||    
T  5015537 gtgagtgtaaaaggtgtattgccacatggggtggtacatgtatcacc 5015583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 21 - 174
Target Start/End: Original strand, 35069763 - 35069916
Alignment:
Q  21 tacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgt 120  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| || ||| |||||||||||||||||||||||    
T  35069763 tacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttatgtgaggtccaagttgccacgtgtcagaattttgt 35069862  T
Q  121 gtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactcttt 174  Q
    || | |||||||||| ||||||||||| ||||||||||||||||| ||||||||    
T  35069863 gtagatgtaaaggatatattgccacataggatggtacatgtatcatcactcttt 35069916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 21 - 165
Target Start/End: Complemental strand, 24001070 - 24000926
Alignment:
Q  21 tacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgt 120  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||    
T  24001070 tacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcagaattttgt 24000971  T
Q  121 gtgggtgtaaaggatgtattgccacatgggatggtacatgtatca 165  Q
     |||||||||||| |||||||||||||| | ||||||||||||||    
T  24000970 atgggtgtaaagggtgtattgccacatgaggtggtacatgtatca 24000926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 21 - 165
Target Start/End: Complemental strand, 42538489 - 42538345
Alignment:
Q  21 tacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgt 120  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||    
T  42538489 tacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcagaattttgt 42538390  T
Q  121 gtgggtgtaaaggatgtattgccacatgggatggtacatgtatca 165  Q
     |||||||||||| |||||||||||||| | ||||||||||||||    
T  42538389 atgggtgtaaagggtgtattgccacatgaggtggtacatgtatca 42538345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 21 - 165
Target Start/End: Original strand, 42972894 - 42973038
Alignment:
Q  21 tacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgt 120  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| || ||| |||||||||||||||||||||||    
T  42972894 tacacctcatgtattagggatattttggtaagttcatctcacaaccacattttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttgt 42972993  T
Q  121 gtgggtgtaaaggatgtattgccacatgggatggtacatgtatca 165  Q
    ||||||||||| | ||||||||||||| |||| ||||||||||||    
T  42972994 gtgggtgtaaatggtgtattgccacataggatagtacatgtatca 42973038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 19 - 171
Target Start/End: Original strand, 41861714 - 41861868
Alignment:
Q  19 tatacaccttatgtatta--gggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaatt 116  Q
    |||||||| |||||||||  | |||||||||||||||| ||||||||||||||||||||||||||||||| || || |||||||||||||||||||||||    
T  41861714 tatacaccctatgtattatagagatattttggtaagtttatctcacaaccacactttatcttctatttgtatggggtccaggttgccacgtgtcagaatt 41861813  T
Q  117 ttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
    |||| |||||||||||| |||||||||||||||  ||||||||||||||||||||    
T  41861814 ttgtatgggtgtaaagggtgtattgccacatggagtggtacatgtatcaccactc 41861868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 29 - 171
Target Start/End: Complemental strand, 26898452 - 26898310
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||| || ||||||| ||||||||||||||||| |||||||||    
T  26898452 atgtattagggatattttggtaagttcatcttacaaccacactttatattctatttgtgtggggtccaggttaccacgtgtcagaattttatgtgggtgt 26898353  T
Q  129 aaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
    ||| | ||||||||||||| |||||||||||||||||||||||    
T  26898352 aaaaggtgtattgccacataggatggtacatgtatcaccactc 26898310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 21 - 174
Target Start/End: Complemental strand, 5810982 - 5810829
Alignment:
Q  21 tacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgt 120  Q
    |||||| ||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| || ||| |||||||| ||||| ||||||||    
T  5810982 tacaccctatatattagggatattttgataagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacatgtcaaaattttgt 5810883  T
Q  121 gtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactcttt 174  Q
     |||||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  5810882 atgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcactcttt 5810829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 28 - 165
Target Start/End: Complemental strand, 27393311 - 27393174
Alignment:
Q  28 tatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtg 127  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||| || |||||||||| | |||||||||||| ||||||||    
T  27393311 tatgtattagggatatttttgtaagttcatctcacaaccacactttatcttctatttatgtggggtccaggttgcctcatgtcagaattttatgtgggtg 27393212  T
Q  128 taaaggatgtattgccacatgggatggtacatgtatca 165  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  27393211 taaaggatgtattgccacatggggtggtacatgtatca 27393174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 21 - 174
Target Start/End: Original strand, 44326220 - 44326373
Alignment:
Q  21 tacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgt 120  Q
    ||||||| || ||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||| |  |||| |||||||||||||||||||| |    
T  44326220 tacacctcatatattagggatattttggtaagttcatctcacaaccacactttatcatctatttatgtgggatccagattgccacgtgtcagaattttat 44326319  T
Q  121 gtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactcttt 174  Q
    ||||||||||||| |||||||||||||||  |||||||||||||||||||||||    
T  44326320 gtgggtgtaaagggtgtattgccacatggtgtggtacatgtatcaccactcttt 44326373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 29 - 165
Target Start/End: Complemental strand, 32029867 - 32029731
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    ||||||||||||||||||||||| || |||| |||||||||||||||||||||||| |||| || ||| |||||||||||||||||||||||||||||||    
T  32029867 atgtattagggatattttggtaaattcatctaacaaccacactttatcttctatttatgtggggtccaagttgccacgtgtcagaattttgtgtgggtgt 32029768  T
Q  129 aaaggatgtattgccacatgggatggtacatgtatca 165  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  32029767 aaagggtgtattgccacatggggtggtacatgtatca 32029731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 40 - 175
Target Start/End: Complemental strand, 16180396 - 16180261
Alignment:
Q  40 atattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgtaaaggatgtat 139  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||||| | |||||    
T  16180396 atattttggtaaattcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtgtggatgtaaaaggtgtat 16180297  T
Q  140 tgccacatgggatggtacatgtatcaccactcttta 175  Q
    ||||||||||| |||||||||||||| |||||||||    
T  16180296 tgccacatggggtggtacatgtatcatcactcttta 16180261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 29 - 172
Target Start/End: Complemental strand, 44416984 - 44416841
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||| ||||||||| |||    
T  44416984 atgtattagggatattttgataagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaaatttgtgtggatgt 44416885  T
Q  129 aaaggatgtattgccacatgggatggtacatgtatcaccactct 172  Q
    ||| | |||||||||||||| | |||||||||||||| ||||||    
T  44416884 aaaaggtgtattgccacatgaggtggtacatgtatcatcactct 44416841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 29 - 171
Target Start/End: Complemental strand, 43343674 - 43343532
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||| ||||||||| |||    
T  43343674 atgtattagggatattttgataagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaaatttgtgtggatgt 43343575  T
Q  129 aaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
    ||| | |||||||||||||| | |||||||||||||| |||||    
T  43343574 aaaaggtgtattgccacatgaggtggtacatgtatcatcactc 43343532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 32 - 173
Target Start/End: Original strand, 45326073 - 45326214
Alignment:
Q  32 tattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgtaaa 131  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||| || ||||  | |||| |||||||||||| ||||||||||||    
T  45326073 tattagggatattttggtaagttcatctcacaatcacactttatcttctatttatgtggggtccagactaccacctgtcagaattttatgtgggtgtaaa 45326172  T
Q  132 ggatgtattgccacatgggatggtacatgtatcaccactctt 173  Q
     | ||||||| |||||||| ||||||||||||||||||||||    
T  45326173 tggtgtattgtcacatggggtggtacatgtatcaccactctt 45326214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 29 - 171
Target Start/End: Original strand, 10573799 - 10573941
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    |||||||||| |||||||||||| || ||||||||||||||||||||||||||||| |||| || | || ||||||| | |||||||||| |||||||||    
T  10573799 atgtattaggaatattttggtaaattcatctcacaaccacactttatcttctatttatgtggggtcaagattgccacatatcagaattttatgtgggtgt 10573898  T
Q  129 aaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
    ||||||| ||||| |||||| | ||||||||||||||||||||    
T  10573899 aaaggatatattgtcacatgcggtggtacatgtatcaccactc 10573941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 29 - 150
Target Start/End: Complemental strand, 38160629 - 38160508
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    |||||||||||||||||| |||| || |||||||||| |||||||||||||||||| |||| || ||| |||||||||||||||||||||||||||||||    
T  38160629 atgtattagggatattttagtaacttcatctcacaactacactttatcttctatttatgtggggtccaagttgccacgtgtcagaattttgtgtgggtgt 38160530  T
Q  129 aaaggatgtattgccacatggg 150  Q
    || || ||||||||||||||||    
T  38160529 aaggggtgtattgccacatggg 38160508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 32 - 172
Target Start/End: Complemental strand, 4638246 - 4638106
Alignment:
Q  32 tattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgtaaa 131  Q
    ||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||| || | ||||| |||||||||||||| |||| ||| ||||||    
T  4638246 tattatggatattttggtaagttcatctcacaaccatactttatcttctatttgtgtggggtctaggttaccacgtgtcagaatcttgtatggatgtaaa 4638147  T
Q  132 ggatgtattgccacatgggatggtacatgtatcaccactct 172  Q
    || ||||||| ||| | || |||||||||||||||||||||    
T  4638146 gggtgtattgtcacgtagggtggtacatgtatcaccactct 4638106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 33 - 165
Target Start/End: Original strand, 9216355 - 9216487
Alignment:
Q  33 attagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgtaaag 132  Q
    ||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||| ||   | |||||| | |||||||||||||||||| ||||||     
T  9216355 attagagatattttggtaagttcatctcacaaccacattttatcttctatttgtgtggggtttaagttgccgcatgtcagaattttgtgtggatgtaaaa 9216454  T
Q  133 gatgtattgccacatgggatggtacatgtatca 165  Q
    | ||||||| |||||||| ||||| || |||||    
T  9216455 ggtgtattgtcacatggggtggtatatatatca 9216487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 34 - 171
Target Start/End: Original strand, 43317498 - 43317635
Alignment:
Q  34 ttagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgtaaagg 133  Q
    |||||||||||||| ||| || ||||||||| |||||||  ||||||||||||||| || | || ||||||| |||||||||||||||||||||||| ||    
T  43317498 ttagggatattttgataaattcatctcacaatcacacttactcttctatttgtgtggggtctagattgccacatgtcagaattttgtgtgggtgtaaggg 43317597  T
Q  134 atgtattgccacatgggatggtacatgtatcaccactc 171  Q
     ||||||||||||   |   ||||||||||||||||||    
T  43317598 gtgtattgccacacaagggtgtacatgtatcaccactc 43317635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 21 - 146
Target Start/End: Complemental strand, 5194289 - 5194164
Alignment:
Q  21 tacaccttatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgt 120  Q
    |||||| ||||| ||| |||||||||| ||| || ||||||||| |||||||  ||||||||||||||| || | || ||||||| ||||| ||||||||    
T  5194289 tacaccctatgttttaaggatattttgataaattcatctcacaatcacacttactcttctatttgtgtggggtctagattgccacatgtcaaaattttgt 5194190  T
Q  121 gtgggtgtaaaggatgtattgccaca 146  Q
    |||||||||| || ||||||||||||    
T  5194189 gtgggtgtaagggttgtattgccaca 5194164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 59 - 174
Target Start/End: Complemental strand, 47279744 - 47279629
Alignment:
Q  59 tcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtaca 158  Q
    |||||||||||||||||||||||||| | |  |  |||| || |||| | |||||||||| ||||||| |||||| ||||||| || |||||||||||||    
T  47279744 tcacaaccacactttatcttctatttatataggatccagattaccacatatcagaattttatgtgggtataaagggtgtattgtcagatgggatggtaca 47279645  T
Q  159 tgtatcaccactcttt 174  Q
    ||||||||||||||||    
T  47279644 tgtatcaccactcttt 47279629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 24280635 - 24280545
Alignment:
Q  40 atattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgtaa 130  Q
    |||||||||||| || ||||||||| |||||||| ||||||||||||||| || ||| |||||||  | ||||||||||||| | ||||||    
T  24280635 atattttggtaaattcatctcacaatcacactttctcttctatttgtgtggggtccaagttgccatatatcagaattttgtgcgagtgtaa 24280545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 99 - 172
Target Start/End: Original strand, 40237039 - 40237112
Alignment:
Q  99 ttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactct 172  Q
    ||||||| |||||| |||||||||||||||||  | ||||||||||||||||   |||||||||||||||||||    
T  40237039 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatgggggtgtacatgtatcaccactct 40237112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 173
Target Start/End: Complemental strand, 27535211 - 27535137
Alignment:
Q  99 ttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactctt 173  Q
    ||||||| |||||||||||||||||| |||||  |||||||||||||||||     |||||||||||||||||||    
T  27535211 ttgccacatgtcagaattttgtgtggatgtaagagatgtattgccacatggaggaatacatgtatcaccactctt 27535137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 174
Target Start/End: Complemental strand, 31408613 - 31408538
Alignment:
Q  99 ttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactcttt 174  Q
    ||||||| |||||| ||||| |||||||||||  | ||||||| ||||||||   |||||||||||||||||||||    
T  31408613 ttgccacatgtcaggattttatgtgggtgtaagaggtgtattgtcacatgggggtgtacatgtatcaccactcttt 31408538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 145
Target Start/End: Original strand, 36361945 - 36361987
Alignment:
Q  104 acgtgtcagaattttgtgtgggtgt-aaaggatgtattgccac 145  Q
    |||||||||| |||||||||||||| |||||||||||||||||    
T  36361945 acgtgtcagatttttgtgtgggtgtcaaaggatgtattgccac 36361987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 108; Significance: 2e-54; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 28 - 171
Target Start/End: Complemental strand, 14239 - 14097
Alignment:
Q  28 tatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtg 127  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||    
T  14239 tatgtattagggatatttttgtaagttcatctcacaaccacactttatcttctatttgtgtg-ggtccaggttgccacgtgtcagaattttgtgtggatg 14141  T
Q  128 taaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
    |||||| |||||||||||||||| |||||||||||||| |||||    
T  14140 taaagggtgtattgccacatggggtggtacatgtatcatcactc 14097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 28 - 171
Target Start/End: Complemental strand, 24567 - 24425
Alignment:
Q  28 tatgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtg 127  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||    
T  24567 tatgtattagggatatttttgtaagttcatctcacaaccacactttatcttctatttgtgtg-ggtccaggttgccacgtgtcagaattttgtgtggatg 24469  T
Q  128 taaaggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
    |||||| |||||||||||||||| |||||||||||||| |||||    
T  24468 taaagggtgtattgccacatggggtggtacatgtatcatcactc 24425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 92; Significance: 7e-45; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 32 - 171
Target Start/End: Original strand, 11304 - 11443
Alignment:
Q  32 tattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgtaaa 131  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||| || ||| ||||| ||||||||||||||||||| ||||||||    
T  11304 tattagggatattttggtaagttcatctcacaaccacactttatcttctattgatgtggggtccaagttgctacgtgtcagaattttgtgtaggtgtaaa 11403  T
Q  132 ggatgtattgccacatgggatggtacatgtatcaccactc 171  Q
       ||||||||||||||||||||||||||||||| |||||    
T  11404 tagtgtattgccacatgggatggtacatgtatcatcactc 11443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 29 - 165
Target Start/End: Complemental strand, 23471 - 23335
Alignment:
Q  29 atgtattagggatattttggtaagttaatctcacaaccacactttatcttctatttgtgtgtggcccaggttgccacgtgtcagaattttgtgtgggtgt 128  Q
    ||||||||| |||||||||||||||| |||| |||| |||||||||||||||||||||||| ||  ||  ||||||||||| ||||||||||||||||||    
T  23471 atgtattagagatattttggtaagttcatcttacaatcacactttatcttctatttgtgtgaggttcaatttgccacgtgttagaattttgtgtgggtgt 23372  T
Q  129 aaaggatgtattgccacatgggatggtacatgtatca 165  Q
    |||   ||||||| |||||||| |||| |||||||||    
T  23371 aaaacgtgtattgtcacatggggtggtgcatgtatca 23335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 173
Target Start/End: Complemental strand, 45699 - 45625
Alignment:
Q  99 ttgccacgtgtcagaattttgtgtgggtgtaaaggatgtattgccacatgggatggtacatgtatcaccactctt 173  Q
    ||||||| |||||| ||||| |||||||||||  | ||||||||||||||||   ||||||||||||||||||||    
T  45699 ttgccacatgtcaggattttatgtgggtgtaagaggtgtattgccacatgggtgtgtacatgtatcaccactctt 45625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 45770 - 45720
Alignment:
Q  28 tatgtattagggatattttggtaagttaatctcacaaccacactttatctt 78  Q
    ||||||||| |||||||||||||| || |||||||||||| ||||| ||||    
T  45770 tatgtattaaggatattttggtaaattcatctcacaaccatactttctctt 45720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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