View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16516_low_20 (Length: 330)
Name: NF16516_low_20
Description: NF16516
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16516_low_20 |
 | |
|
| [»] scaffold0067 (1 HSPs) |
| | |
|
| [»] scaffold0912 (1 HSPs) |
| | |
|
| [»] scaffold0043 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 286; Significance: 1e-160; HSPs: 24)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 19 - 312
Target Start/End: Original strand, 28128011 - 28128304
Alignment:
| Q |
19 |
aagaaggagcaaattaaaagattgattgaaactggaaaggatcttgtaattggactccctgctcctcttccagatgttgaacgttattcatccagagact |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28128011 |
aagaaggagcaaattaaaagattgattgaaaatggaaaggatcttgtaattggactccctgctcctcttccagatgttgaacgttattcatccagagact |
28128110 |
T |
|
| Q |
119 |
atatttcttttgaaagtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcac |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28128111 |
atatttcttttgaaagtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcac |
28128210 |
T |
|
| Q |
219 |
aggaaaaactacaatggccaaagaagtggggaaggaacttaagcaattcaaacaatttacttacgtcatcgatacaacactgtcattgtctcct |
312 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
28128211 |
aggaaaaactacaatggccaaagaagtggggaaggaacttaagcaattcaaacaatttacttacgtcatcgatacaacagtgtcattgtctcct |
28128304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 19 - 312
Target Start/End: Original strand, 28141942 - 28142235
Alignment:
| Q |
19 |
aagaaggagcaaattaaaagattgattgaaactggaaaggatcttgtaattggactccctgctcctcttccagatgttgaacgttattcatccagagact |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28141942 |
aagaaggagcaaattaaaagattgattgaaaatggaaaggatcttgtaattggactccctgctcctcttccagatgttgaacgttattcatccagagact |
28142041 |
T |
|
| Q |
119 |
atatttcttttgaaagtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcac |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28142042 |
atatttcttttgaaagtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcac |
28142141 |
T |
|
| Q |
219 |
aggaaaaactacaatggccaaagaagtggggaaggaacttaagcaattcaaacaatttacttacgtcatcgatacaacactgtcattgtctcct |
312 |
Q |
| |
|
||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||| |
|
|
| T |
28142142 |
aggaaaaactacattggccaaaaaagtggggaaggaacttaagcaatgcaaacaatttactaacgtcatcgatacaacagtgtcattgtctcct |
28142235 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 19 - 312
Target Start/End: Original strand, 28045495 - 28045788
Alignment:
| Q |
19 |
aagaaggagcaaattaaaagattgattgaaactggaaaggatcttgtaattggactccctgctcctcttccagatgttgaacgttattcatccagagact |
118 |
Q |
| |
|
||||||||| ||||||||| ||| ||||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| | ||| |
|
|
| T |
28045495 |
aagaaggagaaaattaaaaaattaattgaaactagaaaggatcttgtaattggactccctggtcatcttccagatgttgaacgttattcatccaaacact |
28045594 |
T |
|
| Q |
119 |
atatttcttttgaaagtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcac |
218 |
Q |
| |
|
||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||| |
|
|
| T |
28045595 |
atatttcttttgaaagtagggaattcaaatacaaagagcttttagatgctctgaaagatgacaacaattatataaccaggttgcaagggatggggggcac |
28045694 |
T |
|
| Q |
219 |
aggaaaaactacaatggccaaagaagtggggaaggaacttaagcaattcaaacaatttacttacgtcatcgatacaacactgtcattgtctcct |
312 |
Q |
| |
|
||||||||||||| |||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
28045695 |
aggaaaaactacattggccaaagaagtgggtaaggaacttaagcactccaaacaatttacttacgtcatcgatacaacattgtcattgtctcct |
28045788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 19 - 312
Target Start/End: Complemental strand, 28474353 - 28474060
Alignment:
| Q |
19 |
aagaaggagcaaattaaaagattgattgaaactggaaaggatcttgtaattggactccctgctcctcttccagatgttgaacgttattcatccagagact |
118 |
Q |
| |
|
||||||||||| |||| |||||||||| ||||||||||||| ||| ||||||| ||||||||| |||||||||||||||||| ||||||||| | ||| |
|
|
| T |
28474353 |
aagaaggagcagattacaagattgattcaaactggaaaggaacttcaaattggattccctgctcgtcttccagatgttgaacgctattcatcccaacact |
28474254 |
T |
|
| Q |
119 |
atatttcttttgaaagtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcac |
218 |
Q |
| |
|
||||| ||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||| |
|
|
| T |
28474253 |
atattccttttaaaagtagggaatccaaatacaaagagcttttagatgctctgaaagatgacaacaattttataaccgggttgcaagggatggggggcac |
28474154 |
T |
|
| Q |
219 |
aggaaaaactacaatggccaaagaagtggggaaggaacttaagcaattcaaacaatttacttacgtcatcgatacaacactgtcattgtctcct |
312 |
Q |
| |
|
|||||||||||||||| ||| ||||||||| |||||||||||||||| |||||||||||| |||| ||||||| ||| ||||||| |||||| |
|
|
| T |
28474153 |
aggaaaaactacaatgtccatagaagtgggtaaggaacttaagcaatccaaacaatttaccagcgtcgtcgatacgacagtgtcattatctcct |
28474060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 19 - 312
Target Start/End: Complemental strand, 28499805 - 28499512
Alignment:
| Q |
19 |
aagaaggagcaaattaaaagattgattgaaactggaaaggatcttgtaattggactccctgctcctcttccagatgttgaacgttattcatccagagact |
118 |
Q |
| |
|
|||||||||||||| |||||||| ||||||||||||||| | ||| ||||| ||||||||| | |||||||||||||||||||||||||||| | ||| |
|
|
| T |
28499805 |
aagaaggagcaaatgaaaagattaattgaaactggaaagcaactttcaattgaactccctgcccgtcttccagatgttgaacgttattcatcccaacact |
28499706 |
T |
|
| Q |
119 |
atatttcttttgaaagtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcac |
218 |
Q |
| |
|
||||| ||||| ||||||| |||||||||||||||||||||| |||||| ||||||||||||||| || |||||||||||||||||||||||||||||| |
|
|
| T |
28499705 |
atattccttttaaaagtagggaatccaaatacaaagagcttttagatgctatgaaagatgacaacaattttataaccgggttgcaagggatggggggcac |
28499606 |
T |
|
| Q |
219 |
aggaaaaactacaatggccaaagaagtggggaaggaacttaagcaattcaaacaatttacttacgtcatcgatacaacactgtcattgtctcct |
312 |
Q |
| |
|
||||||||||||| |||||| |||||| || |||||||||||||| | ||||||||||||| ||||||||||||| || ||||||| |||||| |
|
|
| T |
28499605 |
aggaaaaactacattggccagagaagttggtaaggaacttaagcagtccaaacaatttactcacgtcatcgatacgacgatgtcattatctcct |
28499512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 27 - 312
Target Start/End: Complemental strand, 27466399 - 27466114
Alignment:
| Q |
27 |
gcaaattaaaagattgattgaaactggaaaggatcttgtaattggactccctgctcctcttccagatgttgaacgttattcatccagagactatatttct |
126 |
Q |
| |
|
||||||||||| ||||||||||| ||||||| |||| ||||||||||||||||| |||||||||||| || ||||||||||| ||||||||||| |
|
|
| T |
27466399 |
gcaaattaaaaagctgattgaaactagaaaggaacttgcaattggactccctgctcgtcttccagatgtcgagcgttattcatcttctcactatatttct |
27466300 |
T |
|
| Q |
127 |
tttgaaagtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcacaggaaaaa |
226 |
Q |
| |
|
||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27466299 |
tttgaaagtagggaatccaaatacaaagagcttttagatgctctgaaagattgcaacaattatataaccgggttgcaagggatggggggcacaggaaaaa |
27466200 |
T |
|
| Q |
227 |
ctacaatggccaaagaagtggggaaggaacttaagcaattcaaacaatttacttacgtcatcgatacaacactgtcattgtctcct |
312 |
Q |
| |
|
||||| |||||||||||||||| |||||||||||| ||| |||||||||||| ||||||| ||||| ||| |||| || |||||| |
|
|
| T |
27466199 |
ctacattggccaaagaagtgggtaaggaacttaagaaatccaaacaatttacccacgtcattgatacgacagtgtcgttttctcct |
27466114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 19 - 312
Target Start/End: Complemental strand, 28515372 - 28515079
Alignment:
| Q |
19 |
aagaaggagcaaattaaaagattgattgaaactggaaaggatcttgtaattggactccctgctcctcttccagatgttgaacgttattcatccagagact |
118 |
Q |
| |
|
||||||||| |||| |||| ||| ||||||||||||||| | ||| ||||| ||||||||| | |||||||||||||||||||||||||||| | ||| |
|
|
| T |
28515372 |
aagaaggagaaaatgaaaatattaattgaaactggaaagcaactttcaattgaactccctgcccgtcttccagatgttgaacgttattcatcccaacact |
28515273 |
T |
|
| Q |
119 |
atatttcttttgaaagtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcac |
218 |
Q |
| |
|
||||| ||||| |||| || |||| ||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||| || |
|
|
| T |
28515272 |
atattccttttaaaagcagggaatctaaatacaaagagcttttagatgctctgaaagatgacaacaattatataatcgggttgcaagggatggggggaac |
28515173 |
T |
|
| Q |
219 |
aggaaaaactacaatggccaaagaagtggggaaggaacttaagcaattcaaacaatttacttacgtcatcgatacaacactgtcattgtctcct |
312 |
Q |
| |
|
||||||||||||| ||||||||||||| || |||||||||||||| | ||||||||||| ||||||||||||||| ||| ||||||| |||||| |
|
|
| T |
28515172 |
aggaaaaactacattggccaaagaagttggtaaggaacttaagcagtccaaacaatttagttacgtcatcgatacgacagtgtcattatctcct |
28515079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 19 - 279
Target Start/End: Original strand, 28176103 - 28176363
Alignment:
| Q |
19 |
aagaaggagcaaattaaaagattgattgaaactggaaaggatcttgtaattggactccctgctcctcttccagatgttgaacgttattcatccagagact |
118 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||| |||||||| ||||||||||||||||||| | ||| |
|
|
| T |
28176103 |
aagaaggagcaaattaaaagattaattgaaactggaaaggaactttcaattggactccctgctcgtcttccaggtgttgaacgttattcatcccaacact |
28176202 |
T |
|
| Q |
119 |
atatttcttttgaaagtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcac |
218 |
Q |
| |
|
||||| ||||| ||||||| |||||||||||||||||||||| ||||| ||||||||||||||| |||| ||| ||||||| |||| ||||||||||| |
|
|
| T |
28176203 |
atattccttttaaaagtagggaatccaaatacaaagagcttttggatgcattgaaagatgacaacaattatgtaatcgggttgaaaggaatggggggcac |
28176302 |
T |
|
| Q |
219 |
aggaaaaactacaatggccaaagaagtggggaaggaacttaagcaattcaaacaatttact |
279 |
Q |
| |
|
||||||||||||| ||||||||||||| || |||||||||||||| | ||||||||||||| |
|
|
| T |
28176303 |
aggaaaaactacattggccaaagaagttggtaaggaacttaagcagtccaaacaatttact |
28176363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 19 - 279
Target Start/End: Original strand, 28077480 - 28077740
Alignment:
| Q |
19 |
aagaaggagcaaattaaaagattgattgaaactggaaaggatcttgtaattggactccctgctcctcttccagatgttgaacgttattcatccagagact |
118 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||| |||||||| ||||||||||||||||||| | ||| |
|
|
| T |
28077480 |
aagaaggagcaaattaaaagattaattgaaactggaaaggaactttcaattggactccctgctcgtcttccaggtgttgaacgttattcatcccaacact |
28077579 |
T |
|
| Q |
119 |
atatttcttttgaaagtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcac |
218 |
Q |
| |
|
||||| ||||| ||||||| |||||||| ||||||||||||| ||||| ||||||||||||||| |||| ||| ||||||| |||| ||||||||||| |
|
|
| T |
28077580 |
atattccttttaaaagtagggaatccaaacacaaagagcttttggatgcattgaaagatgacaacaattatgtaatcgggttgaaaggaatggggggcac |
28077679 |
T |
|
| Q |
219 |
aggaaaaactacaatggccaaagaagtggggaaggaacttaagcaattcaaacaatttact |
279 |
Q |
| |
|
||||||||||||| ||||||||||||| || |||||||||||||| | | ||||||||||| |
|
|
| T |
28077680 |
aggaaaaactacattggccaaagaagttggtaaggaacttaagcagtcccaacaatttact |
28077740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 19 - 305
Target Start/End: Complemental strand, 17751376 - 17751090
Alignment:
| Q |
19 |
aagaaggagcaaattaaaagattgattgaaactggaaaggatcttgtaattggactccctgctcctcttccagatgttgaacgttattcatccagagact |
118 |
Q |
| |
|
||||| |||||||| | |||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||| ||||||||||||||| | ||| |
|
|
| T |
17751376 |
aagaacgagcaaatcagaagattgattgaaactggaaaggaactttcaattggactccctgctcgtcttccagatgtagaacgttattcatcccaacact |
17751277 |
T |
|
| Q |
119 |
atatttcttttgaaagtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcac |
218 |
Q |
| |
|
||||| | ||| |||| ||| |||| | ||||||||||||||| ||| | ||||||||||||||| |||| ||| ||||||| |||||||||||||||| |
|
|
| T |
17751276 |
atattccctttaaaagcagagaatcaagatacaaagagcttttggattcattgaaagatgacaacaattatgtaatcgggttgaaagggatggggggcac |
17751177 |
T |
|
| Q |
219 |
aggaaaaactacaatggccaaagaagtggggaaggaacttaagcaattcaaacaatttacttacgtcatcgatacaacactgtcatt |
305 |
Q |
| |
|
||||||||||||| |||| |||||||| || |||||||||||||||| |||| |||||||||||||||| ||||| ||| ||||||| |
|
|
| T |
17751176 |
aggaaaaactacattggcaaaagaagttggtaaggaacttaagcaatccaaaaaatttacttacgtcattgatacgacaatgtcatt |
17751090 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 19 - 305
Target Start/End: Complemental strand, 19052696 - 19052410
Alignment:
| Q |
19 |
aagaaggagcaaattaaaagattgattgaaactggaaaggatcttgtaattggactccctgctcctcttccagatgttgaacgttattcatccagagact |
118 |
Q |
| |
|
||||| |||||||| | |||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||| ||||||||||||||| | ||| |
|
|
| T |
19052696 |
aagaacgagcaaatcagaagattgattgaaactggaaaggaactttcaattggactccctgctcgtcttccagatgtagaacgttattcatcccaacact |
19052597 |
T |
|
| Q |
119 |
atatttcttttgaaagtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcac |
218 |
Q |
| |
|
||||| | ||| |||| ||| |||| | ||||||||||||||| ||| | ||||||||||||||| |||| ||| ||||||| |||||||||||||||| |
|
|
| T |
19052596 |
atattccctttaaaagcagagaatcaagatacaaagagcttttggattcattgaaagatgacaacaattatgtaatcgggttgaaagggatggggggcac |
19052497 |
T |
|
| Q |
219 |
aggaaaaactacaatggccaaagaagtggggaaggaacttaagcaattcaaacaatttacttacgtcatcgatacaacactgtcatt |
305 |
Q |
| |
|
||||||||||||| |||| |||||||| || |||||||||||||||| |||| |||||||||||||||| ||||| ||| ||||||| |
|
|
| T |
19052496 |
aggaaaaactacattggcaaaagaagttggtaaggaacttaagcaatccaaaaaatttacttacgtcattgatacgacaatgtcatt |
19052410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 19 - 303
Target Start/End: Original strand, 27996687 - 27996971
Alignment:
| Q |
19 |
aagaaggagcaaattaaaagattgattgaaactggaaaggatcttgtaattggactccctgctcctcttccagatgttgaacgttattcatccagagact |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||| |||||||| | ||| |
|
|
| T |
27996687 |
aagaaggagcaaattaaaagattgattgaaactggaaaggaactttcaattggactccctgctcctcttccaggtgttgaacgtcattcatcccaacact |
27996786 |
T |
|
| Q |
119 |
atatttcttttgaaagtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcac |
218 |
Q |
| |
|
||||| | ||| ||||||| ||||| |||||||||||||||| || || ||||||||||||||| |||| ||| ||||||| ||||||||||||||| |
|
|
| T |
27996787 |
atattacatttaaaagtagggaatcccaatacaaagagcttttggaagcattgaaagatgacaacaattatgtaatcgggttgatagggatggggggcac |
27996886 |
T |
|
| Q |
219 |
aggaaaaactacaatggccaaagaagtggggaaggaacttaagcaattcaaacaatttacttacgtcatcgatacaacactgtca |
303 |
Q |
| |
|
||||||||||| |||||||| ||||||||| |||||||||| | ||| |||||||||| | | |||||| ||||| ||| ||||| |
|
|
| T |
27996887 |
aggaaaaactagaatggccatagaagtgggtaaggaacttatggaatccaaacaatttgcatgcgtcattgatacgacaatgtca |
27996971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 19 - 312
Target Start/End: Original strand, 27950254 - 27950547
Alignment:
| Q |
19 |
aagaaggagcaaattaaaagattgattgaaactggaaaggatcttgtaattggactccctgctcctcttccagatgttgaacgttattcatccagagact |
118 |
Q |
| |
|
||||||||| |||||||||||||||| || |||||||||| ||| ||||||| ||||||||| ||||||||||||||||| ||||| || || || |
|
|
| T |
27950254 |
aagaaggagacaattaaaagattgattcaatctggaaaggaactttcaattggagtccctgctcttcttccagatgttgaacaatattcgtcgcaagtct |
27950353 |
T |
|
| Q |
119 |
atatttcttttgaaagtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcac |
218 |
Q |
| |
|
||||| ||||||||| || |||||||| ||||| ||||||| |||||| ||||||||||||||| |||| ||| ||||||| |||||||||||||||| |
|
|
| T |
27950354 |
atattcattttgaaagcaggaaatccaactacaaccagcttttggatgctttgaaagatgacaacaattatgtaatcgggttgaaagggatggggggcac |
27950453 |
T |
|
| Q |
219 |
aggaaaaactacaatggccaaagaagtggggaaggaacttaagcaattcaaacaatttacttacgtcatcgatacaacactgtcattgtctcct |
312 |
Q |
| |
|
||||||||||| ||||||||||||| || |||||||||||||| | ||||||||||||| | ||||||| || ||| ||||||| |||||| |
|
|
| T |
27950454 |
aggaaaaactatgttggccaaagaagttggtaaggaacttaagcagtccaaacaatttactcaaatcatcgacacgacagtgtcattttctcct |
27950547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 28 - 312
Target Start/End: Original strand, 27960960 - 27961244
Alignment:
| Q |
28 |
caaattaaaagattgattgaaactggaaaggatcttgtaattggactccctgctcctcttccagatgttgaacgttattcatccagagactatatttctt |
127 |
Q |
| |
|
||||| |||| ||||||||||||||||||||| ||| | |||||||| ||||| | |||||||||| ||||||||||||||||| | |||||||| ||| |
|
|
| T |
27960960 |
caaataaaaatattgattgaaactggaaaggaacttttgattggacttcctgcccatcttccagatattgaacgttattcatcccaacactatattcctt |
27961059 |
T |
|
| Q |
128 |
ttgaaagtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcacaggaaaaac |
227 |
Q |
| |
|
|| |||| || ||| |||||||||||||||||| ||||| |||| |||||||||| ||||| || |||||||||||||||||||||||||||||||| |
|
|
| T |
27961060 |
ttaaaagcagggaattcaaatacaaagagcttttggatgcattgaatgatgacaacaactatatgactgggttgcaagggatggggggcacaggaaaaac |
27961159 |
T |
|
| Q |
228 |
tacaatggccaaagaagtggggaaggaacttaagcaattcaaacaatttacttacgtcatcgatacaacactgtcattgtctcct |
312 |
Q |
| |
|
|||||||| ||| |||||||| ||| |||||||||| | ||| |||||||| | |||| || ||| || ||||||| |||||| |
|
|
| T |
27961160 |
tacaatggtcaaggaagtgggtaagaaacttaagcagtccaagaaatttactcaaatcattgacacagcagtgtcattttctcct |
27961244 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 19 - 295
Target Start/End: Original strand, 27907871 - 27908147
Alignment:
| Q |
19 |
aagaaggagcaaattaaaagattgattgaaactggaaaggatcttgtaattggactccctgctcctcttccagatgttgaacgttattcatccagagact |
118 |
Q |
| |
|
|||||||||||||| |||||||| ||||||||||||||| | ||| ||||| ||||||||| | | ||||||||||||||||||||||||| | ||| |
|
|
| T |
27907871 |
aagaaggagcaaatgaaaagattaattgaaactggaaagcaactttcaattgaactccctgcccgttatccagatgttgaacgttattcatcccaacact |
27907970 |
T |
|
| Q |
119 |
atatttcttttgaaagtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcac |
218 |
Q |
| |
|
|| || |||| |||| || ||| ||||||| | |||||| ||||| ||||||||||||||| ||||||||| || |||||||||||||||||||| |
|
|
| T |
27907971 |
attttcattttaaaagcagggaattaaaatacagaatgcttttggatgcattgaaagatgacaacaattatataactggcttgcaagggatggggggcac |
27908070 |
T |
|
| Q |
219 |
aggaaaaactacaatggccaaagaagtggggaaggaacttaagcaattcaaacaatttacttacgtcatcgatacaa |
295 |
Q |
| |
|
|||||||||||| ||||||||||||| || |||||||||||||| | ||||||||||||| | |||||||||||| |
|
|
| T |
27908071 |
aggaaaaactacgttggccaaagaagttggtaaggaacttaagcagtccaaacaatttactcaaatcatcgatacaa |
27908147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 19 - 276
Target Start/End: Complemental strand, 27436779 - 27436522
Alignment:
| Q |
19 |
aagaaggagcaaattaaaagattgattgaaactggaaaggatcttgtaattggactccctgctcctcttccagatgttgaacgttattcatccagagact |
118 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||| ||| ||||| || || ||||| || ||||||||| |||| | |||||||| || ||| |
|
|
| T |
27436779 |
aagaaggagcgaattaaaagattgattgaaactggaaaggaactttcaattgcaccccttgctcgtcgtccagatgtagaacttcattcatcccgacact |
27436680 |
T |
|
| Q |
119 |
atatttcttttgaaagtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcac |
218 |
Q |
| |
|
||||| |||| |||| || |||||||||||||||||||||| ||||| | |||||||| |||||||||||||||||||| | |||||||||||||| |
|
|
| T |
27436679 |
atattcattttaaaagcagggaatccaaatacaaagagcttttggatgcattaaaagatgaagacagttatataaccgggttgtatgggatggggggcac |
27436580 |
T |
|
| Q |
219 |
aggaaaaactacaatggccaaagaagtggggaaggaacttaagcaattcaaacaattt |
276 |
Q |
| |
|
||||||||||||| |||||| |||||||| || | | ||||| ||| |||||||||| |
|
|
| T |
27436579 |
aggaaaaactacattggccattgaagtgggtaacgcagttaaggaatccaaacaattt |
27436522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 19 - 279
Target Start/End: Original strand, 11406870 - 11407130
Alignment:
| Q |
19 |
aagaaggagcaaattaaaagattgattgaaactggaaaggatcttgtaattggactccctgctcctcttccagatgttgaacgttattcatccagagact |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| || | ||| ||||||| || |||||| |||||||||||||||| | |||||| || || | | |
|
|
| T |
11406870 |
aagaaggagcaaattaaaagattgattgaaactggagagaaactttcaattggattcactgctcgtcttccagatgttgaatgctattcacccggacagt |
11406969 |
T |
|
| Q |
119 |
atatttcttttgaaagtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcac |
218 |
Q |
| |
|
||||| ||||| ||| ||| ||| ||||||| || ||||| | |||| ||||||||||||||| || ||||| ||||||||| |||||||||||||| |
|
|
| T |
11406970 |
atattcctttttaaattagtttatcttaatacaatgatcttttagttgctttgaaagatgacaacaattttataatcgggttgcatgggatggggggcac |
11407069 |
T |
|
| Q |
219 |
aggaaaaactacaatggccaaagaagtggggaaggaacttaagcaattcaaacaatttact |
279 |
Q |
| |
|
||||||||||||| ||| | |||||| | | | |||||||||| | ||||||||||||| |
|
|
| T |
11407070 |
aggaaaaactacattggttattgaagtgtgtatgtaacttaagcattccaaacaatttact |
11407130 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 67 - 265
Target Start/End: Original strand, 26622614 - 26622812
Alignment:
| Q |
67 |
attggactccctgctcctcttccagatgttgaacgttattcatccagagactatatttcttttgaaagtagaaaatccaaatacaaagagctttttgatg |
166 |
Q |
| |
|
|||| ||||||| || ||||||||||||||||||||||||||||| | || ||||||||| |||| ||| | || ||||||||||| | || |||| |
|
|
| T |
26622614 |
attgaactccctcatcgtcttccagatgttgaacgttattcatccaaaacttacatttcttttaaaagcagagagtcaaaatacaaagaattgttggatg |
26622713 |
T |
|
| Q |
167 |
ctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcacaggaaaaactacaatggccaaagaagtggggaaggaacttaagcaat |
265 |
Q |
| |
|
| || ||||||| ||||| ||||||||||| |||||||||||||||||||| | ||||||||| |||||| ||||||||| || ||||| ||||||| |
|
|
| T |
26622714 |
cactaaaagatggcaacaactatataaccggattgcaagggatggggggcactaggaaaactacattggccatagaagtgggtaaagaactaaagcaat |
26622812 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 121 - 261
Target Start/End: Complemental strand, 18725274 - 18725134
Alignment:
| Q |
121 |
atttcttttgaaagtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcacag |
220 |
Q |
| |
|
|||||||||||||| ||||| | |||||| |||||||||| ||||| || | |||||||| || ||||||||| | |||||||| ||||||||||||| |
|
|
| T |
18725274 |
atttcttttgaaagcagaaagttgaaatacgaagagcttttggatgcactaagagatgacagcaattatataactagattgcaaggaatggggggcacag |
18725175 |
T |
|
| Q |
221 |
gaaaaactacaatggccaaagaagtggggaaggaacttaag |
261 |
Q |
| |
|
||||||||||| |||| ||||||||||| || |||||||| |
|
|
| T |
18725174 |
gaaaaactacattggcaaaagaagtgggtaaacaacttaag |
18725134 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 146 - 302
Target Start/End: Complemental strand, 27403272 - 27403116
Alignment:
| Q |
146 |
aatacaaagagctttttgatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcacaggaaaaactacaatggccaaagaagt |
245 |
Q |
| |
|
|||||||||| || || ||||| |||||||||||||||| ||||||||||| |||||||||||||| ||||| ||||||||||| |||||| | |||| |
|
|
| T |
27403272 |
aatacaaagaactgttggatgcactgaaagatgacaacaactatataaccggattgcaagggatgggtggcaccggaaaaactactttggccataaaagt |
27403173 |
T |
|
| Q |
246 |
ggggaaggaacttaagcaattcaaacaatttacttacgtcatcgatacaacactgtc |
302 |
Q |
| |
|
||| || ||||| ||| ||| |||||| |||| ||||| ||||||||| |||| |
|
|
| T |
27403172 |
gggtaaagaactaaaggaatctggacaattcacttgtgtcattgatacaacagtgtc |
27403116 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 163 - 248
Target Start/End: Complemental strand, 18033612 - 18033527
Alignment:
| Q |
163 |
gatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcacaggaaaaactacaatggccaaagaagtggg |
248 |
Q |
| |
|
||||| |||||||||||||||| ||||||||||| |||||||||||||| ||||| ||||||||||| |||||| | ||||||| |
|
|
| T |
18033612 |
gatgcactgaaagatgacaacaactatataaccggattgcaagggatgggtggcaccggaaaaactactttggccataaaagtggg |
18033527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 84 - 261
Target Start/End: Original strand, 27342141 - 27342318
Alignment:
| Q |
84 |
tcttccagatgttgaacgttattcatccagagactatatttcttttgaaagtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaac |
183 |
Q |
| |
|
|||||||| |||||| |||||||| || | | || ||| |||||||||| ||||| | |||||| |||| ||||| ||||| || | |||||||| | |
|
|
| T |
27342141 |
tcttccaggtgttgagcgttattcttctcaatattacattccttttgaaagcagaaacttgaaatacgaagatcttttggatgcactaagagatgacagc |
27342240 |
T |
|
| Q |
184 |
agttatataaccgggttgcaagggatggggggcacaggaaaaactacaatggccaaagaagtggggaaggaacttaag |
261 |
Q |
| |
|
| |||||| || | |||| ||| |||||||||||||||||||||||| |||| ||||||||||| || |||||||| |
|
|
| T |
27342241 |
aattatattactgcattgcgaggaatggggggcacaggaaaaactacattggcaaaagaagtgggtaaacaacttaag |
27342318 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 186 - 261
Target Start/End: Original strand, 27368533 - 27368608
Alignment:
| Q |
186 |
ttatataaccgggttgcaagggatggggggcacaggaaaaactacaatggccaaagaagtggggaaggaacttaag |
261 |
Q |
| |
|
|||||||||||| ||||| || |||||||||||||||||||||||| |||| ||||||||||| || |||||||| |
|
|
| T |
27368533 |
ttatataaccggattgcacggaatggggggcacaggaaaaactacattggcaaaagaagtgggtaaacaacttaag |
27368608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 27771593 - 27771672
Alignment:
| Q |
169 |
ctgaaagatgacaacagttatataaccgggttgcaagggatggggggcacaggaaaaactacaatggccaaagaagtggg |
248 |
Q |
| |
|
||||||||||| |||| || ||||||||||||||||| ||||| |||| || ||||||||| | |||||||||||||| |
|
|
| T |
27771593 |
ctgaaagatgaaaacaactacataaccgggttgcaaggtatgggaggcatcggtaaaactacattagccaaagaagtggg |
27771672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 143; Significance: 4e-75; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 19 - 305
Target Start/End: Complemental strand, 9332298 - 9332013
Alignment:
| Q |
19 |
aagaaggagcaaattaaaagattgattgaaactggaaaggatcttgtaattggactccctgctcctcttccagatgttgaacgttattcatccagagact |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||| | |||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||| | | | |
|
|
| T |
9332298 |
aagaaggagcaaattaaaagattgattgaaacggtaaaggaactttcaattggactccctgctcgtcttccagatgttgaacgttattcatcccaacatt |
9332199 |
T |
|
| Q |
119 |
atatttcttttgaaagtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcac |
218 |
Q |
| |
|
||||| ||||| ||||||| |||||||||||||||||||||| ||||| ||||||| ||||||| || | ||| ||||||| ||||||||| |||||| |
|
|
| T |
9332198 |
atattccttttaaaagtagggaatccaaatacaaagagcttttggatgcattgaaagacgacaacaattttgtaatcgggttgaaagggatggcgggcac |
9332099 |
T |
|
| Q |
219 |
aggaaaaactacaatggccaaagaagtggggaaggaacttaagcaattcaaacaatttacttacgtcatcgatacaacactgtcatt |
305 |
Q |
| |
|
||||||| ||||| || |||||||| | || |||||||||||||||| |||| |||||||||||||||| ||||| ||| ||||||| |
|
|
| T |
9332098 |
aggaaaacctacattgaccaaagaaattggtaaggaacttaagcaatccaaaaaatttacttacgtcat-gatacgacagtgtcatt |
9332013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 19 - 305
Target Start/End: Complemental strand, 9386081 - 9385796
Alignment:
| Q |
19 |
aagaaggagcaaattaaaagattgattgaaactggaaaggatcttgtaattggactccctgctcctcttccagatgttgaacgttattcatccagagact |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||| | |||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||| | | | |
|
|
| T |
9386081 |
aagaaggagcaaattaaaagattgattgaaacggtaaaggaactttcaattggactccctgctcgtcttccagatgttgaacgttattcatcccaacatt |
9385982 |
T |
|
| Q |
119 |
atatttcttttgaaagtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcac |
218 |
Q |
| |
|
||||| ||||| ||||||| |||||||||||||||||||||| ||||| ||||||| ||||||| || | ||| ||||||| ||||||||| |||||| |
|
|
| T |
9385981 |
atattccttttaaaagtagggaatccaaatacaaagagcttttggatgcattgaaagacgacaacaattttgtaatcgggttgaaagggatggcgggcac |
9385882 |
T |
|
| Q |
219 |
aggaaaaactacaatggccaaagaagtggggaaggaacttaagcaattcaaacaatttacttacgtcatcgatacaacactgtcatt |
305 |
Q |
| |
|
||||||| ||||| || |||||||| | || |||||||||||||||| |||| |||||||||||||||| ||||| ||| ||||||| |
|
|
| T |
9385881 |
aggaaaacctacattgaccaaagaaattggtaaggaacttaagcaatccaaaaaatttacttacgtcat-gatacgacagtgtcatt |
9385796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 131; Significance: 6e-68; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 19 - 312
Target Start/End: Complemental strand, 8696719 - 8696428
Alignment:
| Q |
19 |
aagaaggagcaaattaaaagattgattgaaactggaaaggatcttgtaattggactccctgctcctcttccagatgttgaacgttattcatccagagact |
118 |
Q |
| |
|
|||||| |||||||||||||||| ||||| |||||||||| ||| |||||||||||||||| |||||||| ||||||||||||||||||| | ||| |
|
|
| T |
8696719 |
aagaagaagcaaattaaaagattaattga--ctggaaaggaactttcaattggactccctgcttgtcttccaggtgttgaacgttattcatcccaacact |
8696622 |
T |
|
| Q |
119 |
atatttcttttgaaagtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcac |
218 |
Q |
| |
|
||||| ||||| ||| |||||||||||||||||||||| ||||| ||||||||||||||| |||| ||| ||||||| |||||||||||||||| |
|
|
| T |
8696621 |
atattccttttagaagccaggaatccaaatacaaagagcttttggatgcattgaaagatgacaacaattatgtaatcgggttgaaagggatggggggcac |
8696522 |
T |
|
| Q |
219 |
aggaaaaactacaatggccaaagaagtggggaaggaacttaagcaattcaaacaatttacttacgtcatcgatacaacactgtcattgtctcct |
312 |
Q |
| |
|
||||||||||||| ||||||||||||| || |||||||||||||||| |||||| |||||| | |||| || |||||| ||||||| |||||| |
|
|
| T |
8696521 |
aggaaaaactacattggccaaagaagttggtaaggaacttaagcaatccaaacagtttactcaaatcattgacacaacagtgtcattttctcct |
8696428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0067 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0067
Description:
Target: scaffold0067; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 19 - 312
Target Start/End: Original strand, 22041 - 22334
Alignment:
| Q |
19 |
aagaaggagcaaattaaaagattgattgaaactggaaaggatcttgtaattggactccctgctcctcttccagatgttgaacgttattcatccagagact |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| || | ||| ||||||| || |||||| |||||||||||||||| | |||||| || || | | |
|
|
| T |
22041 |
aagaaggagcaaattaaaagattgattgaaactggagagaaactttcaattggattcactgctcgtcttccagatgttgaatgctattcacccggacagt |
22140 |
T |
|
| Q |
119 |
atatttcttttgaaagtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcac |
218 |
Q |
| |
|
||||| ||||||||| ||| ||| ||||||||||||||||| |||||| ||||||||||||||| || |||||||||| ||||||||||||||||||| |
|
|
| T |
22141 |
atattccttttgaaattagtccatcgaaatacaaagagcttttagatgctttgaaagatgacaacaattttataaccgggatgcaagggatggggggcac |
22240 |
T |
|
| Q |
219 |
aggaaaaactacaatggccaaagaagtggggaaggaacttaagcaattcaaacaatttacttacgtcatcgatacaacactgtcattgtctcct |
312 |
Q |
| |
|
||||||||||||| ||| ||| |||||| | | | |||| ||||| | ||||||||||||| | ||||| | || ||| ||||||| |||||| |
|
|
| T |
22241 |
aggaaaaactacattggtcaaggaagtgtgtatgaaactaaagcagtccaaacaatttactcaaatcatccacacgacagtgtcattttctcct |
22334 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 19 - 312
Target Start/End: Complemental strand, 26028665 - 26028372
Alignment:
| Q |
19 |
aagaaggagcaaattaaaagattgattgaaactggaaaggatcttgtaattggactccctgctcctcttccagatgttgaacgttattcatccagagact |
118 |
Q |
| |
|
|||||||| || ||||||| |||| | |||||||||||||| |||| |||||||||||||||| ||||| |||||||||||| |||||||| | ||| |
|
|
| T |
26028665 |
aagaaggaacatattaaaaaattgttggaaactggaaaggaacttgcaattggactccctgcttatcttctagatgttgaacgatattcatctcaacact |
26028566 |
T |
|
| Q |
119 |
atatttcttttgaaagtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaacagttatataaccgggttgcaagggatggggggcac |
218 |
Q |
| |
|
||||||||||| |||| ||| |||| ||||||| |||||||| ||| |||||||| ||||||| |||||||| |||||| ||||||||||||||||| |
|
|
| T |
26028565 |
atatttcttttaaaagcagagaatctaaatacattgagcttttgaatgtactgaaagacgacaacaattatataatcgggttacaagggatggggggcac |
26028466 |
T |
|
| Q |
219 |
aggaaaaactacaatggccaaagaagtggggaaggaacttaagcaattcaaacaatttacttacgtcatcgatacaacactgtcattgtctcct |
312 |
Q |
| |
|
| ||||||||||||||| ||| || ||||| ||| |||| ||||| | ||| ||||||||| | ||||||| || ||| ||||||| |||||| |
|
|
| T |
26028465 |
aagaaaaactacaatggtcaaggaggtgggtaagaaactaaagcagtccaaccaatttactcaaatcatcgacacgacaatgtcattttctcct |
26028372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0912 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0912
Description:
Target: scaffold0912; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 84 - 261
Target Start/End: Complemental strand, 1039 - 862
Alignment:
| Q |
84 |
tcttccagatgttgaacgttattcatccagagactatatttcttttgaaagtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaac |
183 |
Q |
| |
|
|||||||| |||||| |||||||| || ||| || |||||||||||||| ||||| | ||||||||||||||||| ||||| || | |||||||||| |
|
|
| T |
1039 |
tcttccaggtgttgagcgttattcttctcaagattacatttcttttgaaagcagaaagttgaaatacaaagagcttttagatgcactaagagatgacaac |
940 |
T |
|
| Q |
184 |
agttatataaccgggttgcaagggatggggggcacaggaaaaactacaatggccaaagaagtggggaaggaacttaag |
261 |
Q |
| |
|
| |||| || | || |||||||| |||||||||||||||||||||||| |||| ||||||||||| || |||||||| |
|
|
| T |
939 |
aattatttatctggattgcaaggaatggggggcacaggaaaaactacattggcaaaagaagtgggtaaacaacttaag |
862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0043 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0043
Description:
Target: scaffold0043; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 84 - 261
Target Start/End: Complemental strand, 75120 - 74943
Alignment:
| Q |
84 |
tcttccagatgttgaacgttattcatccagagactatatttcttttgaaagtagaaaatccaaatacaaagagctttttgatgctctgaaagatgacaac |
183 |
Q |
| |
|
|||||||| |||||| |||||||| || | | || |||||||||||||||||||| | |||||| |||||||||| ||||| || | |||||||||| |
|
|
| T |
75120 |
tcttccaggtgttgagcgttattcttctcaatattacatttcttttgaaagtagaaagttgaaatacgaagagcttttggatgcactaagagatgacaac |
75021 |
T |
|
| Q |
184 |
agttatataaccgggttgcaagggatggggggcacaggaaaaactacaatggccaaagaagtggggaaggaacttaag |
261 |
Q |
| |
|
| |||||| || || |||||||| |||||||||||||||||||||||| |||| ||||||||||| || |||||||| |
|
|
| T |
75020 |
aattatattactggattgcaaggaatggggggcacaggaaaaactacattggcaaaagaagtgggtaaacaacttaag |
74943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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