View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16521_high_36 (Length: 391)
Name: NF16521_high_36
Description: NF16521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16521_high_36 |
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Alignment Details
Target: chr1 (Bit Score: 258; Significance: 1e-143; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 8 - 289
Target Start/End: Complemental strand, 13869610 - 13869329
Alignment:
| Q |
8 |
gagaagaaagaggtgacaactaggatttgtgaagcatataagagaga--tattcattataaaccccattgtcttttttgtttgtaattttattgatgcaa |
105 |
Q |
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| T |
13869610 |
gagaagaaagaggtgacaactaggatttgtgaagcatataagagagagatattcattataaaccccattgtcttttttgtttgtaattttattgatgcaa |
13869511 |
T |
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| Q |
106 |
aaatatttgaggatccaacacattctatgactaaaatggttaattaaagagacactcgagggggtgtgtgaatgattttggtacgttcagatactatact |
205 |
Q |
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| T |
13869510 |
aaatatttgaggatccaacacattctatgactaaaatggttaattaaagagacactcga--gggtgtgtgaatgattttggtacgttcagatactatact |
13869413 |
T |
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| Q |
206 |
gacaatgtatcacatatttagtgacaaaatcacagtttagtgcataagattgattaatatgattcaataaataggtttggatcc |
289 |
Q |
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| T |
13869412 |
gacaatgtatcacatatttagtgacaaaatcacagcttagtgcataagattgattaatatgattcaataaataggtttggatcc |
13869329 |
T |
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