View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16521_high_43 (Length: 363)
Name: NF16521_high_43
Description: NF16521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16521_high_43 |
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Alignment Details
Target: chr8 (Bit Score: 355; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 355; E-Value: 0
Query Start/End: Original strand, 1 - 355
Target Start/End: Original strand, 37604083 - 37604437
Alignment:
| Q |
1 |
tggtcacaaaatgatgaaagtaattcatctcaaaacatagaagaaatattgacaataattcaagaggctatgaaagcaggggatggtccaaaagtgggtg |
100 |
Q |
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| T |
37604083 |
tggtcacaaaatgatgaaagtaattcatctcaaaacatagaagaaatattgacaataattcaagaggctatgaaagcaggggatggtccaaaagtgggtg |
37604182 |
T |
|
| Q |
101 |
accagtttcttggtggaagtatggattttgatgatttagatacagatgctgacatcgatgatattgaaaccagcggtgattttgtttgtgccttgtgaat |
200 |
Q |
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| T |
37604183 |
accagtttcttggtggaagtatggattttgatgatttagatacagatgctgacatcgatgatattgaaaccagcggtgattttgtttgtgccttgtgaat |
37604282 |
T |
|
| Q |
201 |
gatgatgcactttgtagacaattcttccttaaaagtggttttaagataagatgtgttcttttttccatcatccttaaccatgtaaggaacaaagaggttt |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37604283 |
gatgatgcactttgtagacaattcttccttaaaagtggttttaagataagatgtgttcttttttccatcatccttaaccatgtaaggaacaaagaggttt |
37604382 |
T |
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| Q |
301 |
agttgagtgggttttgattgattttcctttcattggaagttacttgtcttcatct |
355 |
Q |
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| T |
37604383 |
agttgagtgggttttgattgattttcctttcattggaagttacttgtcttcatct |
37604437 |
T |
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