View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16521_low_24 (Length: 466)

Name: NF16521_low_24
Description: NF16521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16521_low_24
NF16521_low_24
[»] scaffold0220 (2 HSPs)
scaffold0220 (249-456)||(18288-18495)
scaffold0220 (156-213)||(18195-18252)
[»] chr3 (53 HSPs)
chr3 (249-456)||(6110064-6110271)
chr3 (249-456)||(10572592-10572799)
chr3 (249-456)||(15600884-15601091)
chr3 (249-456)||(15607429-15607636)
chr3 (252-456)||(13211305-13211509)
chr3 (249-456)||(13248607-13248814)
chr3 (251-456)||(16482483-16482688)
chr3 (255-456)||(17781118-17781319)
chr3 (255-456)||(10579355-10579556)
chr3 (251-456)||(18522665-18522870)
chr3 (249-456)||(15357586-15357793)
chr3 (249-456)||(8490488-8490702)
chr3 (251-456)||(18519980-18520182)
chr3 (255-456)||(19089745-19089946)
chr3 (251-456)||(17200184-17200389)
chr3 (268-456)||(15342219-15342407)
chr3 (251-456)||(13516813-13517018)
chr3 (249-410)||(18640792-18640953)
chr3 (255-456)||(32056900-32057101)
chr3 (255-456)||(1647521-1647726)
chr3 (251-437)||(16200128-16200313)
chr3 (249-441)||(29924971-29925163)
chr3 (249-441)||(29974124-29974316)
chr3 (251-437)||(16200434-16200619)
chr3 (256-456)||(24253388-24253589)
chr3 (355-456)||(17136465-17136566)
chr3 (251-313)||(18534758-18534820)
chr3 (155-213)||(8490394-8490452)
chr3 (157-213)||(6109972-6110028)
chr3 (157-213)||(13248515-13248571)
chr3 (156-213)||(18640989-18641046)
chr3 (157-213)||(13211211-13211267)
chr3 (251-296)||(18510924-18510969)
chr3 (155-199)||(10579611-10579655)
chr3 (157-213)||(17136137-17136193)
chr3 (155-213)||(16482727-16482784)
chr3 (157-213)||(15607672-15607729)
chr3 (157-213)||(15351237-15351293)
chr3 (157-213)||(15357829-15357885)
chr3 (157-213)||(17200427-17200483)
chr3 (157-213)||(18519885-18519941)
chr3 (157-199)||(10572848-10572890)
chr3 (157-213)||(15601127-15601184)
chr3 (157-213)||(1647768-1647824)
chr3 (157-213)||(13516719-13516775)
chr3 (157-213)||(17781358-17781414)
chr3 (157-213)||(19089985-19090041)
chr3 (157-213)||(32057144-32057200)
chr3 (157-213)||(18510829-18510885)
chr3 (157-213)||(18522570-18522626)
chr3 (165-213)||(18534671-18534719)
chr3 (157-213)||(29924879-29924935)
chr3 (157-213)||(29974032-29974088)
[»] scaffold0234 (4 HSPs)
scaffold0234 (249-456)||(2321-2528)
scaffold0234 (249-456)||(11212-11419)
scaffold0234 (157-213)||(2564-2620)
scaffold0234 (157-213)||(11455-11511)
[»] chr6 (28 HSPs)
chr6 (249-456)||(29308890-29309097)
chr6 (249-456)||(29315850-29316057)
chr6 (249-456)||(27381252-27381459)
chr6 (249-456)||(27471635-27471842)
chr6 (251-456)||(17684469-17684674)
chr6 (251-456)||(16566320-16566525)
chr6 (249-456)||(17691440-17691647)
chr6 (251-456)||(188977-189182)
chr6 (251-456)||(25537159-25537364)
chr6 (251-456)||(11651725-11651930)
chr6 (251-456)||(13359269-13359474)
chr6 (288-456)||(20553587-20553755)
chr6 (159-213)||(17691683-17691737)
chr6 (157-213)||(27381495-27381551)
chr6 (157-213)||(27471878-27471934)
chr6 (272-456)||(27925772-27925961)
chr6 (157-213)||(29308798-29308854)
chr6 (157-213)||(29315758-29315814)
chr6 (268-441)||(8509941-8510115)
chr6 (157-213)||(17684712-17684768)
chr6 (156-211)||(11651629-11651684)
chr6 (287-456)||(17850495-17850663)
chr6 (157-213)||(25537405-25537461)
chr6 (256-311)||(31258065-31258120)
chr6 (265-330)||(22259925-22259990)
chr6 (165-213)||(13359512-13359560)
chr6 (165-213)||(16566563-16566611)
chr6 (157-213)||(189221-189280)
[»] chr4 (44 HSPs)
chr4 (249-456)||(868597-868804)
chr4 (249-456)||(5707320-5707527)
chr4 (249-456)||(19926760-19926967)
chr4 (249-456)||(5713948-5714155)
chr4 (249-456)||(26970463-26970670)
chr4 (249-456)||(55612683-55612890)
chr4 (249-456)||(26963640-26963847)
chr4 (251-456)||(18262214-18262419)
chr4 (249-456)||(10621333-10621540)
chr4 (249-456)||(10628412-10628619)
chr4 (251-456)||(18269070-18269280)
chr4 (251-456)||(28393134-28393339)
chr4 (251-456)||(4426604-4426808)
chr4 (261-456)||(8845215-8845410)
chr4 (261-456)||(8858179-8858374)
chr4 (249-364)||(12357136-12357251)
chr4 (257-456)||(20311299-20311499)
chr4 (255-456)||(5668125-5668327)
chr4 (251-455)||(5616215-5616421)
chr4 (255-456)||(10677555-10677753)
chr4 (255-456)||(10891195-10891393)
chr4 (255-456)||(35223576-35223767)
chr4 (157-213)||(5713856-5713912)
chr4 (157-213)||(19927003-19927059)
chr4 (157-213)||(26963548-26963604)
chr4 (157-213)||(26970371-26970427)
chr4 (156-213)||(5707227-5707284)
chr4 (157-213)||(10621576-10621632)
chr4 (157-213)||(12357044-12357100)
chr4 (159-213)||(868507-868561)
chr4 (155-213)||(55612592-55612650)
chr4 (157-213)||(10628655-10628711)
chr4 (157-213)||(17142372-17142428)
chr4 (155-211)||(28393380-28393436)
chr4 (157-213)||(4426847-4426903)
chr4 (157-213)||(18268976-18269032)
chr4 (275-456)||(21454137-21454319)
chr4 (298-365)||(39074278-39074346)
chr4 (164-213)||(55992680-55992729)
chr4 (386-438)||(39074218-39074270)
chr4 (172-213)||(5668371-5668412)
chr4 (165-213)||(8845118-8845166)
chr4 (165-213)||(8858082-8858130)
chr4 (173-213)||(18262136-18262176)
[»] chr1 (27 HSPs)
chr1 (249-456)||(18252030-18252237)
chr1 (249-456)||(18532514-18532721)
chr1 (249-456)||(27131409-27131616)
chr1 (251-456)||(21171233-21171438)
chr1 (251-456)||(27310577-27310782)
chr1 (251-456)||(16359035-16359240)
chr1 (249-456)||(3855919-3856126)
chr1 (255-456)||(36816633-36816834)
chr1 (249-456)||(22657221-22657429)
chr1 (255-456)||(27277557-27277756)
chr1 (283-456)||(12006539-12006712)
chr1 (283-456)||(12014284-12014457)
chr1 (157-213)||(18251936-18251992)
chr1 (157-213)||(18532757-18532813)
chr1 (156-213)||(27310821-27310878)
chr1 (156-213)||(16359280-16359337)
chr1 (261-456)||(9917918-9918106)
chr1 (17-109)||(20839750-20839842)
chr1 (157-213)||(21171479-21171535)
chr1 (155-213)||(27131652-27131706)
chr1 (255-324)||(30720625-30720694)
chr1 (165-210)||(36816881-36816926)
chr1 (157-213)||(3856164-3856220)
chr1 (157-209)||(22657469-22657521)
chr1 (279-356)||(3403248-3403325)
chr1 (279-356)||(3443494-3443571)
chr1 (157-213)||(27277800-27277856)
[»] chr7 (28 HSPs)
chr7 (249-456)||(29327784-29327991)
chr7 (249-456)||(11536062-11536269)
chr7 (249-456)||(11542980-11543187)
chr7 (251-456)||(15152445-15152650)
chr7 (251-456)||(15148144-15148349)
chr7 (251-456)||(18561009-18561214)
chr7 (251-456)||(12750828-12751033)
chr7 (255-452)||(12738542-12738739)
chr7 (251-456)||(18257842-18258047)
chr7 (255-437)||(13392157-13392338)
chr7 (271-456)||(2364917-2365101)
chr7 (157-213)||(2653275-2653331)
chr7 (282-441)||(7396221-7396381)
chr7 (157-213)||(11543223-11543279)
chr7 (157-213)||(12738443-12738499)
chr7 (255-342)||(39111819-39111905)
chr7 (157-213)||(11536305-11536361)
chr7 (157-213)||(12750733-12750789)
chr7 (157-213)||(15152350-15152406)
chr7 (157-212)||(29327690-29327745)
chr7 (157-213)||(15148049-15148105)
chr7 (323-366)||(3132748-3132791)
chr7 (157-212)||(13392030-13392085)
chr7 (299-364)||(10234179-10234244)
chr7 (156-213)||(18258087-18258144)
chr7 (249-281)||(2653207-2653239)
chr7 (27-88)||(20099662-20099723)
chr7 (157-213)||(18560913-18560969)
[»] scaffold0390 (4 HSPs)
scaffold0390 (249-456)||(6934-7141)
scaffold0390 (249-456)||(13950-14157)
scaffold0390 (155-213)||(14193-14251)
scaffold0390 (157-213)||(7177-7233)
[»] chr8 (18 HSPs)
chr8 (249-456)||(21940665-21940872)
chr8 (251-450)||(28554885-28555084)
chr8 (251-456)||(22171491-22171694)
chr8 (255-456)||(6094129-6094330)
chr8 (255-456)||(24642655-24642856)
chr8 (255-382)||(24636860-24636987)
chr8 (155-213)||(21940571-21940629)
chr8 (157-213)||(22070108-22070164)
chr8 (261-453)||(38232380-38232570)
chr8 (156-213)||(6094030-6094087)
chr8 (157-213)||(22171396-22171452)
chr8 (157-209)||(24642556-24642608)
chr8 (270-328)||(2375027-2375085)
chr8 (279-440)||(32872857-32873019)
chr8 (157-213)||(28554791-28554847)
chr8 (287-350)||(10920234-10920297)
chr8 (345-456)||(14983920-14984030)
chr8 (156-194)||(24636604-24636642)
[»] chr2 (10 HSPs)
chr2 (249-456)||(21330248-21330455)
chr2 (249-456)||(18796506-18796713)
chr2 (251-456)||(18619807-18620011)
chr2 (255-395)||(19692597-19692737)
chr2 (315-441)||(20977958-20978084)
chr2 (283-456)||(36270199-36270373)
chr2 (157-213)||(21330493-21330549)
chr2 (369-456)||(18852059-18852146)
chr2 (420-456)||(12098618-12098654)
chr2 (157-213)||(19692773-19692829)
[»] scaffold0433 (2 HSPs)
scaffold0433 (249-456)||(7107-7314)
scaffold0433 (157-213)||(7015-7071)
[»] scaffold0186 (2 HSPs)
scaffold0186 (249-456)||(25990-26197)
scaffold0186 (157-212)||(26231-26286)
[»] chr5 (20 HSPs)
chr5 (249-456)||(24695466-24695673)
chr5 (249-456)||(18569863-18570070)
chr5 (251-456)||(19714498-19714703)
chr5 (255-456)||(19707218-19707419)
chr5 (255-456)||(22547016-22547217)
chr5 (254-437)||(27347497-27347679)
chr5 (249-358)||(39537962-39538071)
chr5 (253-434)||(17285754-17285935)
chr5 (255-358)||(31886537-31886640)
chr5 (157-213)||(24695709-24695765)
chr5 (314-456)||(18807034-18807176)
chr5 (155-213)||(19714742-19714800)
chr5 (253-434)||(17298907-17299088)
chr5 (17-150)||(23007241-23007378)
chr5 (362-454)||(39538701-39538793)
chr5 (156-213)||(27347722-27347779)
chr5 (157-213)||(19707462-19707518)
chr5 (157-212)||(39537870-39537925)
chr5 (275-365)||(33477389-33477479)
chr5 (165-213)||(18570108-18570156)
[»] scaffold0657 (2 HSPs)
scaffold0657 (249-456)||(993-1200)
scaffold0657 (157-213)||(901-957)
[»] scaffold0063 (2 HSPs)
scaffold0063 (251-456)||(5531-5736)
scaffold0063 (165-213)||(5444-5492)
[»] scaffold0008 (2 HSPs)
scaffold0008 (251-432)||(230365-230545)
scaffold0008 (156-213)||(230584-230641)
[»] scaffold0176 (2 HSPs)
scaffold0176 (249-313)||(8446-8510)
scaffold0176 (157-213)||(8546-8602)
[»] scaffold0203 (1 HSPs)
scaffold0203 (157-213)||(23769-23825)
[»] scaffold0326 (2 HSPs)
scaffold0326 (157-213)||(16523-16579)
scaffold0326 (249-282)||(16615-16648)
[»] scaffold0637 (1 HSPs)
scaffold0637 (156-213)||(8943-9000)
[»] scaffold0705 (1 HSPs)
scaffold0705 (157-213)||(41-97)
[»] scaffold0767 (1 HSPs)
scaffold0767 (155-193)||(1-39)
[»] scaffold0565 (2 HSPs)
scaffold0565 (150-213)||(10202-10265)
scaffold0565 (268-299)||(10127-10158)
[»] scaffold0032 (1 HSPs)
scaffold0032 (278-350)||(92194-92267)
[»] scaffold0170 (1 HSPs)
scaffold0170 (157-209)||(5878-5930)


Alignment Details
Target: scaffold0220 (Bit Score: 200; Significance: 1e-109; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 249 - 456
Target Start/End: Original strand, 18288 - 18495
Alignment:
Q  249 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 348  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18288 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaattgaacattaagtataacttaattgtgag 18387  T
Q  349 accccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 448  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18388 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 18487  T
Q  449 ctgatgat 456  Q
    ||||||||    
T  18488 ctgatgat 18495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 18195 - 18252
Alignment:
Q  156 ctgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  18195 ctgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 18252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 200; Significance: 1e-109; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 249 - 456
Target Start/End: Original strand, 6110064 - 6110271
Alignment:
Q  249 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 348  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  6110064 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 6110163  T
Q  349 accccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 448  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6110164 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 6110263  T
Q  449 ctgatgat 456  Q
    ||||||||    
T  6110264 ctgatgat 6110271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 249 - 456
Target Start/End: Complemental strand, 10572799 - 10572592
Alignment:
Q  249 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 348  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10572799 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 10572700  T
Q  349 accccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 448  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10572699 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 10572600  T
Q  449 ctgatgat 456  Q
    ||||||||    
T  10572599 ctgatgat 10572592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 249 - 456
Target Start/End: Complemental strand, 15601091 - 15600884
Alignment:
Q  249 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 348  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  15601091 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 15600992  T
Q  349 accccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 448  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15600991 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 15600892  T
Q  449 ctgatgat 456  Q
    ||||||||    
T  15600891 ctgatgat 15600884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 249 - 456
Target Start/End: Complemental strand, 15607636 - 15607429
Alignment:
Q  249 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 348  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  15607636 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 15607537  T
Q  349 accccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 448  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15607536 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 15607437  T
Q  449 ctgatgat 456  Q
    ||||||||    
T  15607436 ctgatgat 15607429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 252 - 456
Target Start/End: Original strand, 13211305 - 13211509
Alignment:
Q  252 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagacc 351  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  13211305 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 13211404  T
Q  352 ccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactg 451  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  13211405 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgagatatcattaaagcatagagactattatgtaggtagactg 13211504  T
Q  452 atgat 456  Q
    |||||    
T  13211505 atgat 13211509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 249 - 456
Target Start/End: Original strand, 13248607 - 13248814
Alignment:
Q  249 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 348  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  13248607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 13248706  T
Q  349 accccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 448  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  13248707 accccattaaacataaggaaactattctcaaagtattcgtagtcaagctttgttgagaagtgggataacattaaagcatagagactattatgtaggtaga 13248806  T
Q  449 ctgatgat 456  Q
    ||||||||    
T  13248807 ctgatgat 13248814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 251 - 456
Target Start/End: Complemental strand, 16482688 - 16482483
Alignment:
Q  251 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 350  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16482688 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 16482589  T
Q  351 cccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 450  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16482588 cccattaaacataaggaaactactctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 16482489  T
Q  451 gatgat 456  Q
    ||||||    
T  16482488 gatgat 16482483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 255 - 456
Target Start/End: Complemental strand, 17781319 - 17781118
Alignment:
Q  255 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagacccca 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  17781319 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 17781220  T
Q  355 ttaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 454  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17781219 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 17781120  T
Q  455 at 456  Q
    ||    
T  17781119 at 17781118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 255 - 456
Target Start/End: Complemental strand, 10579556 - 10579355
Alignment:
Q  255 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagacccca 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  10579556 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgttaaatggaacattaagtataacttaattgtgagacccca 10579457  T
Q  355 ttaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 454  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  10579456 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgagatatcattaaagcatagagactattatgtaggtagactgatg 10579357  T
Q  455 at 456  Q
    ||    
T  10579356 at 10579355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 251 - 456
Target Start/End: Original strand, 18522665 - 18522870
Alignment:
Q  251 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 350  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18522665 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 18522764  T
Q  351 cccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 450  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  18522765 cccattaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcatttaagcatagagactattatgtaggtagact 18522864  T
Q  451 gatgat 456  Q
    ||||||    
T  18522865 gatgat 18522870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 249 - 456
Target Start/End: Complemental strand, 15357793 - 15357586
Alignment:
Q  249 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 348  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  15357793 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagattagttagtccgtttaatggaacattaagtataacttaattgtgag 15357694  T
Q  349 accccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 448  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15357693 accccattaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtaggtaga 15357594  T
Q  449 ctgatgat 456  Q
    ||||||||    
T  15357593 ctgatgat 15357586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 173; E-Value: 8e-93
Query Start/End: Original strand, 249 - 456
Target Start/End: Original strand, 8490488 - 8490702
Alignment:
Q  249 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 348  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  8490488 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 8490587  T
Q  349 accccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagact-------attatgt 441  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||       |||||||    
T  8490588 accccattaaacataaggaaactattctcaaagtatctgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactacagacgattatgt 8490687  T
Q  442 aggtagactgatgat 456  Q
    |||||||||||||||    
T  8490688 aggtagactgatgat 8490702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 251 - 456
Target Start/End: Original strand, 18519980 - 18520182
Alignment:
Q  251 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 350  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18519980 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 18520079  T
Q  351 cccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 450  Q
    ||| |||||||||||||||||||||| ||   |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18520080 cccgttaaacataaggaaactattcttaa---atccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 18520176  T
Q  451 gatgat 456  Q
    ||||||    
T  18520177 gatgat 18520182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 255 - 456
Target Start/End: Complemental strand, 19089946 - 19089745
Alignment:
Q  255 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagacccca 354  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||     
T  19089946 catttctttattgattttgttttgtttcaaaataataaagtccctagattagttagtccgtttaatggaacattaagtataacttaattgtgagacccct 19089847  T
Q  355 ttaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 454  Q
    |||||||||| ||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19089846 ttaaacataatgaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaatcatagagactattatgtaggtagactgatg 19089747  T
Q  455 at 456  Q
    ||    
T  19089746 at 19089745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 251 - 456
Target Start/End: Complemental strand, 17200389 - 17200184
Alignment:
Q  251 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 350  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  17200389 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgatac 17200290  T
Q  351 cccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 450  Q
    ||| |||||||||| ||||||||||| |||||||||||||| || |||| |||||| ||| |||||||||||||||||||||||||||||| ||||||||    
T  17200289 ccctttaaacataatgaaactattcttaaagtatccgtagttaagctttattgagatgtgtgatatcattaaagcatagagactattatgtgggtagact 17200190  T
Q  451 gatgat 456  Q
    ||||||    
T  17200189 gatgat 17200184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 268 - 456
Target Start/End: Complemental strand, 15342407 - 15342219
Alignment:
Q  268 attttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagaccccattaaacataagga 367  Q
    ||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15342407 attttgttttgtttcaaaataataaagtccctagaatagtttgttcgtttaatggaacattaagtataacttaattgtgagaccccattaaacataagga 15342308  T
Q  368 aactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 456  Q
    | ||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  15342307 acctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtaggtagactgatgat 15342219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 251 - 456
Target Start/End: Original strand, 13516813 - 13517018
Alignment:
Q  251 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 350  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||    
T  13516813 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttcatggaacattaagtataacttaattgtgagac 13516912  T
Q  351 cccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 450  Q
    ||| |||||||||||||||| ||||| |||||||| |||||||| |||| ||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  13516913 cccgttaaacataaggaaacgattcttaaagtatctgtagtcaagctttattgagaagtaggatatcattaaagcacagagactattatgtgggtagact 13517012  T
Q  451 gatgat 456  Q
    ||||||    
T  13517013 gatgat 13517018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 249 - 410
Target Start/End: Complemental strand, 18640953 - 18640792
Alignment:
Q  249 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 348  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18640953 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 18640854  T
Q  349 accccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtg 410  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  18640853 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtg 18640792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 255 - 456
Target Start/End: Complemental strand, 32057101 - 32056900
Alignment:
Q  255 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagacccca 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||| ||||| |||||||     
T  32057101 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacatcaagtataactttattgtaagaccccg 32057002  T
Q  355 ttaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 454  Q
    |||||||||| ||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||    
T  32057001 ttaaacataaagaaactattcttaaagtgtccgtagtcaaactttattgagaagtgggatatcattaaagcatagagactattatgtgggtagactaatg 32056902  T
Q  455 at 456  Q
    ||    
T  32056901 at 32056900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 255 - 456
Target Start/End: Complemental strand, 1647726 - 1647521
Alignment:
Q  255 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataa----cttaattgtgagac 350  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    ||||||||||||||    
T  1647726 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataattaacttaattgtgagac 1647627  T
Q  351 cccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 450  Q
    ||| |||||||||||||||||||| | |||||||||||| |||| |||| |||||||  ||||||| |||||||||||||||||||||||| | ||||||    
T  1647626 cccgttaaacataaggaaactatttttaaagtatccgtaatcaagctttattgagaaaagggatataattaaagcatagagactattatgtggatagact 1647527  T
Q  451 gatgat 456  Q
    ||||||    
T  1647526 gatgat 1647521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 251 - 437
Target Start/End: Original strand, 16200128 - 16200313
Alignment:
Q  251 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 350  Q
    ||||||||||||  ||| |||| |||||||||||||||||||||||| ||||||||||||| | ||||||||||||||| ||||||||||||||||||||    
T  16200128 aaggcatttcttcgttg-ttttattttgtttcaaaataataaagtccttagaatagttagttcgtttaatggaacattatgtataacttaattgtgagac 16200226  T
Q  351 cccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactatt 437  Q
    ||||||||||||||||| | |||||| ||||||| |||||||||  ||| ||| ||||||||||||||||||||||| |||||||||    
T  16200227 cccattaaacataaggacattattcttaaagtattcgtagtcaagatttattgtgaagtgggatatcattaaagcatggagactatt 16200313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 249 - 441
Target Start/End: Original strand, 29924971 - 29925163
Alignment:
Q  249 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 348  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||  ||||||||||| |||||||||||    
T  29924971 acaagacatttctttattgattttgttttgtttcaaaataataaagcccctaaaatagttagtccgtttaatggattattaagtataatttaattgtgag 29925070  T
Q  349 accccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgt 441  Q
    ||||||||||| ||||||| | |||||| ||| |||  |||||||| |||| ||| |||||| |||||||||||||||| ||| |||||||||    
T  29925071 accccattaaatataaggacattattcttaaaatatatgtagtcaagctttattgtgaagtgagatatcattaaagcatggaggctattatgt 29925163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 249 - 441
Target Start/End: Original strand, 29974124 - 29974316
Alignment:
Q  249 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 348  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||  ||||||||||| |||||||||||    
T  29974124 acaagacatttctttattgattttgttttgtttcaaaataataaagcccctaaaatagttagtccgtttaatggattattaagtataatttaattgtgag 29974223  T
Q  349 accccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgt 441  Q
    ||||||||||| ||||||| | |||||| ||| |||  |||||||| |||| ||| |||||| |||||||||||||||| ||| |||||||||    
T  29974224 accccattaaatataaggacattattcttaaaatatatgtagtcaagctttattgtgaagtgagatatcattaaagcatggaggctattatgt 29974316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 251 - 437
Target Start/End: Original strand, 16200434 - 16200619
Alignment:
Q  251 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 350  Q
    ||||||||||||  ||| |||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  16200434 aaggcatttcttcgttg-ttttattttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattatgtataacttaattgtgagac 16200532  T
Q  351 cccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactatt 437  Q
     ||| |||||||||||| | |||||| ||||||| |||||||||  ||| ||| |||||||||| ||||||||||||  ||||||||    
T  16200533 tccaataaacataaggacattattcttaaagtattcgtagtcaagatttattgtgaagtgggatgtcattaaagcatgaagactatt 16200619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 256 - 456
Target Start/End: Complemental strand, 24253589 - 24253388
Alignment:
Q  256 atttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgaga-cccca 354  Q
    ||||||||||||||||||||||  |||||||||||||||||| |||||||| | || | ||| |||||||||||||||| ||||||| |||||| |||||    
T  24253589 atttctttattgattttgttttacttcaaaataataaagtccttagaatagctcgttcgtttgatggaacattaagtatgacttaatcgtgagatcccca 24253490  T
Q  355 ttaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 454  Q
    | ||||||||||| |||||||| |||||||  || |||||| ||| |||  ||||| | || ||||||||||||||||||||||||| |||||||| |||    
T  24253489 tcaaacataaggacactattcttaaagtatatgtggtcaaaatttattgtaaagtgaggtaacattaaagcatagagactattatgtcggtagactaatg 24253390  T
Q  455 at 456  Q
    ||    
T  24253389 at 24253388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 355 - 456
Target Start/End: Original strand, 17136465 - 17136566
Alignment:
Q  355 ttaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 454  Q
    |||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  17136465 ttaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtgggtagactgatg 17136564  T
Q  455 at 456  Q
    ||    
T  17136565 at 17136566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 18534758 - 18534820
Alignment:
Q  251 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcc 313  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18534758 aaggcatttctttattgattttgttttgtttcaaaataataaagtccatagaatagttagtcc 18534820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 8490394 - 8490452
Alignment:
Q  155 actgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  8490394 actgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 8490452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 6109972 - 6110028
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  6109972 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 6110028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 13248515 - 13248571
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  13248515 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 13248571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 156 - 213
Target Start/End: Complemental strand, 18641046 - 18640989
Alignment:
Q  156 ctgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  18641046 ctgttggaataagccctaatagccaatctatattgattgtgtttggctttgtatcatg 18640989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 13211211 - 13211267
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  13211211 tgttggaataagccctaatagccaatctatattgattgggtttggttttgtatcatg 13211267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 251 - 296
Target Start/End: Original strand, 18510924 - 18510969
Alignment:
Q  251 aaggcatttctttattgattttgttttgtttcaaaataataaagtc 296  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  18510924 aaggcatttctttattgattttgttttgtttcaaaataataaagtc 18510969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 10579655 - 10579611
Alignment:
Q  155 actgttggaataagccctaatagccaatctatattgattgggttt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  10579655 actgttggaataagccctaatagccaatctatattgattgggttt 10579611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 17136137 - 17136193
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||    
T  17136137 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 17136193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 155 - 213
Target Start/End: Complemental strand, 16482784 - 16482727
Alignment:
Q  155 actgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    |||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  16482784 actgttagaataagccctaata-ccaatctatattgattgggtttggctttgtatcatg 16482727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 15607729 - 15607672
Alignment:
Q  157 tgttggaataagccctaatagccaatctata-ttgattgggtttcgctttgtatcatg 213  Q
    ||||||||||||||||||||||||||||||| || ||||||||| |||||||||||||    
T  15607729 tgttggaataagccctaatagccaatctatattttattgggtttggctttgtatcatg 15607672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 15351293 - 15351237
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||||||||||||||||||||||||||| ||||||  ||| |||||||||||||    
T  15351293 tgttggaataagccctaatagccaatctataatgattgattttggctttgtatcatg 15351237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 15357885 - 15357829
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||||||||||||||||||||||||||| ||||||  ||| |||||||||||||    
T  15357885 tgttggaataagccctaatagccaatctataatgattgattttggctttgtatcatg 15357829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 17200483 - 17200427
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||| |||||||||||||||||||||| |||||||||||| |||||||| ||||    
T  17200483 tgttggagtaagccctaatagccaatctatgttgattgggtttggctttgtagcatg 17200427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 18519885 - 18519941
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||| |||| |||||||||||||||||||||||||||||| | |||||||||||    
T  18519885 tgttggagtaagtcctaatagccaatctatattgattgggtttggttttgtatcatg 18519941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 157 - 199
Target Start/End: Complemental strand, 10572890 - 10572848
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggttt 199  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  10572890 tgttggaataagccctaatagccaacctatattgattgggttt 10572848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 15601184 - 15601127
Alignment:
Q  157 tgttggaataagccctaatagccaatctata-ttgattgggtttcgctttgtatcatg 213  Q
    ||||||||||||||||||||||||||||||| || ||||||||| | |||||||||||    
T  15601184 tgttggaataagccctaatagccaatctatattttattgggtttggatttgtatcatg 15601127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 1647824 - 1647768
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||| ||||||||||||||   |||||||||||||||||| |||||||||||||    
T  1647824 tgttggagtaagccctaatagctggtctatattgattgggtttggctttgtatcatg 1647768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 13516719 - 13516775
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||| |||||||||||||||||||||| ||||||| |||| ||| |||||||||    
T  13516719 tgttggagtaagccctaatagccaatctatgttgattgagtttggctgtgtatcatg 13516775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 17781414 - 17781358
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||| |||||||||||||||||||||||||||||| |||| | ||| |||||||    
T  17781414 tgttggagtaagccctaatagccaatctatattgattgagtttggttttatatcatg 17781358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 19090041 - 19089985
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||| |||||||||||||||||||||||||||||| |||| | ||| |||||||    
T  19090041 tgttggagtaagccctaatagccaatctatattgattgagtttggttttatatcatg 19089985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 32057200 - 32057144
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||| ||||| |||||||||||||||| ||||||||||||  ||||||||||||    
T  32057200 tgttggagtaagctctaatagccaatctatgttgattgggtttgactttgtatcatg 32057144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 18510829 - 18510885
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||| |||||||||||| ||||||||||||||||| ||||   |||||||||||    
T  18510829 tgttggagtaagccctaatatccaatctatattgattgagtttgattttgtatcatg 18510885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 18522570 - 18522626
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||| |||||||||||| ||||||||||||||||| ||||   |||||||||||    
T  18522570 tgttggagtaagccctaatatccaatctatattgattgagtttgattttgtatcatg 18522626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 213
Target Start/End: Original strand, 18534671 - 18534719
Alignment:
Q  165 taagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||||||||| |||||||||||||||| |||| | |||||||||||    
T  18534671 taagccctaatagtcaatctatattgattgagtttggttttgtatcatg 18534719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 29924879 - 29924935
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||| ||||||||||||| | |||||||||||||| ||||  | ||||||||||    
T  29924879 tgttggagtaagccctaatagtcgatctatattgattgagtttgacattgtatcatg 29924935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 29974032 - 29974088
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||| ||||||||||||| | |||||||||||||| ||||  | ||||||||||    
T  29974032 tgttggagtaagccctaatagtcgatctatattgattgagtttgacattgtatcatg 29974088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 196; Significance: 1e-106; HSPs: 4)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 249 - 456
Target Start/End: Complemental strand, 2528 - 2321
Alignment:
Q  249 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 348  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  2528 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 2429  T
Q  349 accccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 448  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2428 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 2329  T
Q  449 ctgatgat 456  Q
    ||||||||    
T  2328 ctgatgat 2321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 249 - 456
Target Start/End: Complemental strand, 11419 - 11212
Alignment:
Q  249 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 348  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  11419 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 11320  T
Q  349 accccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 448  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 11220  T
Q  449 ctgatgat 456  Q
    ||||||||    
T  11219 ctgatgat 11212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 2620 - 2564
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  2620 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 2564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 11511 - 11455
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  11511 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 11455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 196; Significance: 1e-106; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 249 - 456
Target Start/End: Original strand, 29308890 - 29309097
Alignment:
Q  249 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 348  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29308890 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 29308989  T
Q  349 accccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 448  Q
    | |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29308990 agcccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 29309089  T
Q  449 ctgatgat 456  Q
    ||||||||    
T  29309090 ctgatgat 29309097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 249 - 456
Target Start/End: Original strand, 29315850 - 29316057
Alignment:
Q  249 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 348  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29315850 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 29315949  T
Q  349 accccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 448  Q
    | |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29315950 agcccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 29316049  T
Q  449 ctgatgat 456  Q
    ||||||||    
T  29316050 ctgatgat 29316057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 249 - 456
Target Start/End: Complemental strand, 27381459 - 27381252
Alignment:
Q  249 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 348  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27381459 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 27381360  T
Q  349 accccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 448  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27381359 accccattaaacatatggaaactattctcaaagtatccatagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 27381260  T
Q  449 ctgatgat 456  Q
    ||||||||    
T  27381259 ctgatgat 27381252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 249 - 456
Target Start/End: Complemental strand, 27471842 - 27471635
Alignment:
Q  249 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 348  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27471842 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 27471743  T
Q  349 accccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 448  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471742 accccattaaacatatggaaactattctcaaagtatccatagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 27471643  T
Q  449 ctgatgat 456  Q
    ||||||||    
T  27471642 ctgatgat 27471635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 251 - 456
Target Start/End: Complemental strand, 17684674 - 17684469
Alignment:
Q  251 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 350  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  17684674 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 17684575  T
Q  351 cccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 450  Q
    ||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  17684574 cccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggtagact 17684475  T
Q  451 gatgat 456  Q
    ||||||    
T  17684474 gatgat 17684469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 251 - 456
Target Start/End: Complemental strand, 16566525 - 16566320
Alignment:
Q  251 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 350  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16566525 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 16566426  T
Q  351 cccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 450  Q
    ||| |||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16566425 cccgttaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 16566326  T
Q  451 gatgat 456  Q
    ||||||    
T  16566325 gatgat 16566320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 249 - 456
Target Start/End: Complemental strand, 17691647 - 17691440
Alignment:
Q  249 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 348  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  17691647 acaaggcatttctttattgattttgttttctttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 17691548  T
Q  349 accccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 448  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| ||||  ||||||||||||||||||||||||||| |||||||||||||||||||    
T  17691547 accccattaaacataaggaaactattcttaaagtatccgtagtcaagctttagtgagaagtgggatatcattaaagcataaagactattatgtaggtaga 17691448  T
Q  449 ctgatgat 456  Q
    ||||||||    
T  17691447 ctgatgat 17691440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 251 - 456
Target Start/End: Complemental strand, 189182 - 188977
Alignment:
Q  251 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 350  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  189182 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 189083  T
Q  351 cccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 450  Q
    |||||||||||||||||||||||||| |||||||  |||||||| |||| |||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  189082 cccattaaacataaggaaactattcttaaagtatttgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtgggtagact 188983  T
Q  451 gatgat 456  Q
    ||||||    
T  188982 gatgat 188977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 251 - 456
Target Start/End: Complemental strand, 25537364 - 25537159
Alignment:
Q  251 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 350  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||    
T  25537364 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaataattagtccgtttaatggaacattaagtataactttattgtgagac 25537265  T
Q  351 cccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 450  Q
    ||| |||||||||||||||||||||| ||||||| ||||||||| |||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  25537264 cccgttaaacataaggaaactattcttaaagtattcgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtagact 25537165  T
Q  451 gatgat 456  Q
    ||||||    
T  25537164 gatgat 25537159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 251 - 456
Target Start/End: Original strand, 11651725 - 11651930
Alignment:
Q  251 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 350  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  11651725 aaggcatttctttattgattttgatttgtttcaaaataataaagtccctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 11651824  T
Q  351 cccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 450  Q
    ||||||||| |||||||||||||||| |||||||| |||||||| |||| |||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  11651825 cccattaaaaataaggaaactattctaaaagtatcagtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtgggtagact 11651924  T
Q  451 gatgat 456  Q
    ||||||    
T  11651925 gatgat 11651930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 251 - 456
Target Start/End: Complemental strand, 13359474 - 13359269
Alignment:
Q  251 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 350  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| |  |||||||| |||||||||||||||||| |||| ||    
T  13359474 aaggcatttatttatttattttgttttgtttcaaaataataaagtccctagaatagttagttcgcttaatggagcattaagtataacttaatcgtgaaac 13359375  T
Q  351 cccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 450  Q
     |||||||||||||  | | |||| | ||||||||||||||||| |||| ||| ||| ||||| | ||||||||| ||||||||||||| | | ||||||    
T  13359374 tccattaaacataaaaacattatttttaaagtatccgtagtcaacctttattgtgaaatgggacaacattaaagcgtagagactattatatggatagact 13359275  T
Q  451 gatgat 456  Q
    ||||||    
T  13359274 gatgat 13359269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 288 - 456
Target Start/End: Complemental strand, 20553755 - 20553587
Alignment:
Q  288 aataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatccg 387  Q
    ||||||||| |||| |||| |||||| ||||||| || ||||||||  ||||||| |||||| ||||||||| ||||| | | |||||| |||| |||||    
T  20553755 aataaagtctctaggatagctagtccgtttaatgaaatattaagtacgacttaatcgtgagatcccattaaatataagaatattattcttaaagcatccg 20553656  T
Q  388 tagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 456  Q
    |||| ||  ||| ||| |||||| ||||  ||||||||||| ||| | |||||| ||||||||||||||    
T  20553655 tagtgaatttttattgtgaagtgagataaaattaaagcataaagatttttatgttggtagactgatgat 20553587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 17691737 - 17691683
Alignment:
Q  159 ttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  17691737 ttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 17691683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 27381551 - 27381495
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  27381551 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtttcatg 27381495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 27471934 - 27471878
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  27471934 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtttcatg 27471878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 272 - 456
Target Start/End: Original strand, 27925772 - 27925961
Alignment:
Q  272 tgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacat---taagtata--acttaattgtgagaccccattaaacataagg 366  Q
    |||||||||||||||||||||||||| |||||||  ||||   ||||| |||||||   ||||| |   ||||||| ||||||| |||||||||  |||     
T  27925772 tgttttgtttcaaaataataaagtccttagaataactagtatgtttaacggaacataattaagtgtgtgacttaatcgtgagactccattaaactaaaga 27925871  T
Q  367 aaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 456  Q
    ||| |||||| ||||||||  |||||||||||| ||  ||||||| ||| |||| ||||| | |||||||||||| | || |||||||||    
T  27925872 aaattattcttaaagtatctctagtcaaactttatttggaagtggtatagcattgaagcacaaagactattatgtggataaactgatgat 27925961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 29308798 - 29308854
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  29308798 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 29308854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 29315758 - 29315814
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  29315758 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 29315814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 441
Target Start/End: Original strand, 8509941 - 8510115
Alignment:
Q  268 attttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgaga-ccccattaaacataagg 366  Q
    ||||| |||||||| ||||||||||||||  ||||||| |||||| |||| ||||||||||| |||  |||||||| ||||| |||||||||| || |||    
T  8509941 attttattttgttttaaaataataaagtctatagaataattagtctatttgatggaacattatgtacgacttaattatgagacccccattaaatatgagg 8510040  T
Q  367 aaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgt 441  Q
    |   |||| | |||||||  ||||| || |||| ||  ||| || |||| ||||||| |||| ||||||||||||    
T  8510041 atgatattattaaagtatatgtagttaagctttattatgaaatgagatagcattaaaacataaagactattatgt 8510115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 17684768 - 17684712
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    |||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||    
T  17684768 tgttggaataagccctaatagccaatctatgttgaatgggtttggctttgtatcatg 17684712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 156 - 211
Target Start/End: Original strand, 11651629 - 11651684
Alignment:
Q  156 ctgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatca 211  Q
    |||||||| |||||||||||||||||||||||||||||| |||| |||||||||||    
T  11651629 ctgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatca 11651684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 287 - 456
Target Start/End: Complemental strand, 17850663 - 17850495
Alignment:
Q  287 taataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatcc 386  Q
    |||||||||||||| ||||| ||||   |||  |||||||||| |||  |||||||||||| | || |||||| | ||||| |||||||| ||| |||||    
T  17850663 taataaagtccctataatagctagtttgtttgttggaacattatgtaagacttaattgtgatatccaattaaaaacaaggacactattcttaaattatcc 17850564  T
Q  387 gtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 456  Q
     ||||||| |||| ||| |||||   ||| |||| ||| ||| |||||||||| | ||||||||||||||    
T  17850563 atagtcaagcttt-ttgtgaagtcaaataacattcaagtatatagactattatatgggtagactgatgat 17850495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 25537461 - 25537405
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||| ||||||||||||||||||||||||||| || |||| |||||||||||||    
T  25537461 tgttggattaagccctaatagccaatctatattgactgagtttggctttgtatcatg 25537405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 256 - 311
Target Start/End: Complemental strand, 31258120 - 31258065
Alignment:
Q  256 atttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagt 311  Q
    |||||||||||| |||||||||||||||||||||||||||| ||| |||| |||||    
T  31258120 atttctttattgcttttgttttgtttcaaaataataaagtctctaaaataattagt 31258065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 265 - 330
Target Start/End: Complemental strand, 22259990 - 22259925
Alignment:
Q  265 ttgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaa 330  Q
    ||||||||||| |||| |||||||||||| |||||| ||||  |||||||||||||  ||||||||    
T  22259990 ttgattttgttatgttgcaaaataataaactccctaaaataactagtccatttaatataacattaa 22259925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 13359560 - 13359512
Alignment:
Q  165 taagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    |||| |||||||||||||||||||| |||||||||  ||||||||||||    
T  13359560 taagtcctaatagccaatctatattcattgggtttgactttgtatcatg 13359512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 16566611 - 16566563
Alignment:
Q  165 taagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    |||||||||||||||||||||| ||||||| ||||  ||||||||||||    
T  16566611 taagccctaatagccaatctatgttgattgagtttgactttgtatcatg 16566563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 189280 - 189221
Alignment:
Q  157 tgttggaataagccctaatagccaatcta---tattgattgggtttcgctttgtatcatg 213  Q
    ||||||| ||||||||||||  |||||||   |||||||||||||| |||||||||||||    
T  189280 tgttggagtaagccctaataatcaatctagtatattgattgggtttggctttgtatcatg 189221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 196; Significance: 1e-106; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 249 - 456
Target Start/End: Original strand, 868597 - 868804
Alignment:
Q  249 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 348  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  868597 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 868696  T
Q  349 accccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 448  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  868697 accccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 868796  T
Q  449 ctgatgat 456  Q
    ||||||||    
T  868797 ctgatgat 868804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 249 - 456
Target Start/End: Original strand, 5707320 - 5707527
Alignment:
Q  249 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 348  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5707320 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 5707419  T
Q  349 accccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 448  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  5707420 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 5707519  T
Q  449 ctgatgat 456  Q
    ||||||||    
T  5707520 ctgatgat 5707527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 249 - 456
Target Start/End: Complemental strand, 19926967 - 19926760
Alignment:
Q  249 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 348  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  19926967 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 19926868  T
Q  349 accccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 448  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19926867 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 19926768  T
Q  449 ctgatgat 456  Q
    ||||||||    
T  19926767 ctgatgat 19926760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 249 - 456
Target Start/End: Original strand, 5713948 - 5714155
Alignment:
Q  249 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 348  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  5713948 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagcccatttaatggaacattaagtataacttaattgtgag 5714047  T
Q  349 accccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 448  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  5714048 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 5714147  T
Q  449 ctgatgat 456  Q
    ||||||||    
T  5714148 ctgatgat 5714155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 249 - 456
Target Start/End: Original strand, 26970463 - 26970670
Alignment:
Q  249 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 348  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  26970463 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 26970562  T
Q  349 accccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 448  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  26970563 accccattaaacataaggaaactattctcaaagtatccgtagtcaagatttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 26970662  T
Q  449 ctgatgat 456  Q
    ||||||||    
T  26970663 ctgatgat 26970670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 249 - 456
Target Start/End: Original strand, 55612683 - 55612890
Alignment:
Q  249 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 348  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  55612683 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 55612782  T
Q  349 accccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 448  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  55612783 accccattaaacataaggaaactactctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 55612882  T
Q  449 ctgatgat 456  Q
    ||||||||    
T  55612883 ctgatgat 55612890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 249 - 456
Target Start/End: Original strand, 26963640 - 26963847
Alignment:
Q  249 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 348  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  26963640 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaaatataacttaattgtgag 26963739  T
Q  349 accccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 448  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  26963740 accccattaaacataaggaaactattctcaaagtatccgtagtcaagatttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 26963839  T
Q  449 ctgatgat 456  Q
    ||||||||    
T  26963840 ctgatgat 26963847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 251 - 456
Target Start/End: Original strand, 18262214 - 18262419
Alignment:
Q  251 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 350  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18262214 aaggcatttctttattgattttgtttcgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 18262313  T
Q  351 cccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 450  Q
    ||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18262314 cccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggtagact 18262413  T
Q  451 gatgat 456  Q
    ||||||    
T  18262414 gatgat 18262419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 249 - 456
Target Start/End: Complemental strand, 10621540 - 10621333
Alignment:
Q  249 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 348  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10621540 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctggaatagttagtccgtttaatggaacattaagtataacttaattgtgag 10621441  T
Q  349 accccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 448  Q
    | ||||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10621440 agcccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 10621341  T
Q  449 ctgatgat 456  Q
    ||||||||    
T  10621340 ctgatgat 10621333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 249 - 456
Target Start/End: Complemental strand, 10628619 - 10628412
Alignment:
Q  249 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 348  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10628619 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctggaatagttagtccgtttaatggaacattaagtataacttaattgtgag 10628520  T
Q  349 accccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 448  Q
    | ||||||||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  10628519 agcccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatattattaaagcatagagactattatgtaggtaga 10628420  T
Q  449 ctgatgat 456  Q
    ||||||||    
T  10628419 ctgatgat 10628412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 251 - 456
Target Start/End: Original strand, 18269070 - 18269280
Alignment:
Q  251 aaggcatttctttattgatttt-----gttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgt 345  Q
    ||||||||||||||||||||||     ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  18269070 aaggcatttctttattgattttgttttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgt 18269169  T
Q  346 gagaccccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggt 445  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18269170 gagaccccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggt 18269269  T
Q  446 agactgatgat 456  Q
    |||||||||||    
T  18269270 agactgatgat 18269280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 251 - 456
Target Start/End: Complemental strand, 28393339 - 28393134
Alignment:
Q  251 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 350  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  28393339 aaggcatttctttattgattttgatttgtttcaaaataataaagtccctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 28393240  T
Q  351 cccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 450  Q
    |||||||||||||||||||||||||| |||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  28393239 cccattaaacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagact 28393140  T
Q  451 gatgat 456  Q
    ||||||    
T  28393139 gatgat 28393134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 251 - 456
Target Start/End: Complemental strand, 4426808 - 4426604
Alignment:
Q  251 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 350  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  4426808 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 4426709  T
Q  351 cccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 450  Q
    ||| |||||||||||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  4426708 cccgttaaacataagg-aactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagact 4426610  T
Q  451 gatgat 456  Q
    ||||||    
T  4426609 gatgat 4426604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 261 - 456
Target Start/End: Original strand, 8845215 - 8845410
Alignment:
Q  261 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagaccccattaaac 360  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||    
T  8845215 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagatcccgttaaac 8845314  T
Q  361 ataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 456  Q
    |||||||||||||||| ||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||    
T  8845315 ataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtcggatatcattaaagcatagagactattatgtgggtaggctgatgat 8845410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 261 - 456
Target Start/End: Original strand, 8858179 - 8858374
Alignment:
Q  261 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagaccccattaaac 360  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||    
T  8858179 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagatcccgttaaac 8858278  T
Q  361 ataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 456  Q
    |||||||||||||||| ||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||    
T  8858279 ataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtcggatatcattaaagcatagagactattatgtgggtaggctgatgat 8858374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 249 - 364
Target Start/End: Original strand, 12357136 - 12357251
Alignment:
Q  249 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 348  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  12357136 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 12357235  T
Q  349 accccattaaacataa 364  Q
    ||||||||||||||||    
T  12357236 accccattaaacataa 12357251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 257 - 456
Target Start/End: Original strand, 20311299 - 20311499
Alignment:
Q  257 tttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaag-tataacttaattgtgagaccccat 355  Q
    ||||||||||||||||||||||||| ||||||||||||| | || |||||||| |   || |||||| ||||||| ||||||||||||||||||||||||    
T  20311299 tttctttattgattttgttttgttttaaaataataaagtacttataatagttaatatgttcaatggagcattaaggtataacttaattgtgagaccccat 20311398  T
Q  356 taaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatga 455  Q
    |||||||||||| ||| || | |||||||  || ||||| |||| ||| |||||| |||||||||||||||||||||||||| ||| |||||| ||||||    
T  20311399 taaacataaggacactgtttttaaagtatttgttgtcaagctttattgtgaagtgagatatcattaaagcatagagactattttgtgggtagattgatga 20311498  T
Q  456 t 456  Q
    |    
T  20311499 t 20311499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 255 - 456
Target Start/End: Complemental strand, 5668327 - 5668125
Alignment:
Q  255 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagacccca 354  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||| |||||||| | | ||||| |||||| ||||    
T  5668327 catttctttgttgattttgttttgtttcaaaataataaagtctctagaataattagtctatttaatggagcattaagtgtgatttaatcgtgaga-ccca 5668229  T
Q  355 ttaaacataaggaaactattctcaaag--tatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactga 452  Q
    |||||   ||||| | |||||| ||||  |||  |||||||| |||| ||| |||  | |||| ||||||| ||||||||||||||||| | ||||| ||    
T  5668228 ttaaatgaaaggacattattcttaaagtatatttgtagtcaagctttattgtgaaaagagataacattaaatcatagagactattatgtggatagaccga 5668129  T
Q  453 tgat 456  Q
    ||||    
T  5668128 tgat 5668125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 251 - 455
Target Start/End: Original strand, 5616215 - 5616421
Alignment:
Q  251 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 350  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||| |||| |||||| ||||  ||||||||||||| | ||| |||  |||||     
T  5616215 aaggcatttctttattcattttgttttgtttcaaaataataaagttcctaaaataattagtctatttcttggaacattaagtctgactaaatcatgagat 5616314  T
Q  351 cccattaaacataaggaaactattctcaaagtatccgtagtcaaa--ctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 448  Q
    ||| ||||||   |||| | |||||| ||||||||||| ||||||   ||| ||  ||| |||||||| | |||||||| |||||||||||||| |||||    
T  5616315 cccgttaaactagaggacattattcttaaagtatccgttgtcaaaggttttattatgaattgggatattaataaagcattgagactattatgtatgtaga 5616414  T
Q  449 ctgatga 455  Q
     ||||||    
T  5616415 ttgatga 5616421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 255 - 456
Target Start/End: Complemental strand, 10677753 - 10677555
Alignment:
Q  255 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagacccca 354  Q
    ||||| |||||||||||| ||||||||||| | ||||||| ||||| |||| ||||||  | ||||||| |||||||||| ||||||| | |||| ||||    
T  10677753 catttttttattgattttcttttgtttcaataaaataaagcccctaaaataattagtctgtataatggagcattaagtatgacttaatcgcgaga-ccca 10677655  T
Q  355 ttaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 454  Q
    ||||||  || || | |||||| ||||||||||||||||| |||  | | ||| || |||| |||||||| ||| |||||||||||| ||||||||||||    
T  10677654 ttaaacgaaatgatattattcttaaagtatccgtagtcaagctt--tagtgaaatgagataacattaaagtatatagactattatgtgggtagactgatg 10677557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 255 - 456
Target Start/End: Complemental strand, 10891393 - 10891195
Alignment:
Q  255 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagacccca 354  Q
    ||||| |||||||||||| ||||||||||| | ||||||| ||||| |||| ||||||  | ||||||| |||||||||| ||||||| | |||| ||||    
T  10891393 catttttttattgattttcttttgtttcaataaaataaagcccctaaaataattagtctgtataatggagcattaagtatgacttaatcgcgaga-ccca 10891295  T
Q  355 ttaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 454  Q
    ||||||  || || | |||||| ||||||||||||||||| |||  | | ||| || |||| |||||||| ||| |||||||||||| ||||||||||||    
T  10891294 ttaaacgaaatgatattattcttaaagtatccgtagtcaagctt--tagtgaaatgagataacattaaagtatatagactattatgtgggtagactgatg 10891197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 255 - 456
Target Start/End: Original strand, 35223576 - 35223767
Alignment:
Q  255 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagacccca 354  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||  ||||||||| |||||||| | |||||||          |     
T  35223576 catttctttgttgattttgttttgttttaaaataataaagtccctagaataattagtctgtttaatggagcattaagtgtgacttaat----------cg 35223665  T
Q  355 ttaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 454  Q
    | ||||  ||||| | |||||| ||||||| ||||||||| |||| |||  ||   ||||| |||||||||||| |||||||||||| ||||||| ||||    
T  35223666 taaaacgaaaggacattattcttaaagtattcgtagtcaagctttattgtaaaaaaggataacattaaagcatatagactattatgtgggtagacggatg 35223765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 5713856 - 5713912
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  5713856 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 5713912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 19927059 - 19927003
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  19927059 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 19927003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 26963548 - 26963604
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  26963548 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 26963604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 26970371 - 26970427
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  26970371 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 26970427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 5707227 - 5707284
Alignment:
Q  156 ctgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  5707227 ctgttggaataagccctaatagccaatctatattgattgtgtttggctttgtatcatg 5707284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 10621632 - 10621576
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  10621632 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 10621576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 12357044 - 12357100
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  12357044 tgttggaataagccctaatagccaatctatattgattggatttggctttgtatcatg 12357100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 868507 - 868561
Alignment:
Q  159 ttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  868507 ttggaataaaccctaatagccaatctatattgattgggtttggctttgtatcatg 868561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 55612592 - 55612650
Alignment:
Q  155 actgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    |||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  55612592 actgttagaataagccctaataaccaatctatattgattgggtttggctttgtatcatg 55612650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 10628711 - 10628655
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||    
T  10628711 tgttggaataagccctaatagccaatctatattgattggttttgactttgtatcatg 10628655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 17142428 - 17142372
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    |||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||    
T  17142428 tgttggaaaaagccctaatagccaatctatattgattgggtttgactttgtatcatg 17142372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 28393436 - 28393380
Alignment:
Q  155 actgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatca 211  Q
    ||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||    
T  28393436 actgttggagtaagccctaatagccaatctatattgattgggtttgactttgtatca 28393380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 4426903 - 4426847
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||| |||| |||||||||||||||||||||||||||||| ||| |||||||||    
T  4426903 tgttggagtaagtcctaatagccaatctatattgattgggtttggctctgtatcatg 4426847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 18268976 - 18269032
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||    
T  18268976 tgttggaataagcccaaatagccaatctatgttgaatgggtttggctttgtatcatg 18269032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 275 - 456
Target Start/End: Complemental strand, 21454319 - 21454137
Alignment:
Q  275 tttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaag-tataacttaattgtgagaccccattaaacataaggaaactat 373  Q
    ||||||||||| ||||||||| | |||||||||||||    |||||||||||||||  | | |||||||  ||||||||||||||  |||| || | |||    
T  21454319 tttgtttcaaagtaataaagttcttagaatagttagtttgattaatggaacattaaaatgtgacttaatattgagaccccattaattataatgacattat 21454220  T
Q  374 tctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 456  Q
    | | ||| ||||  |||||||||||| ||| ||| || |||| || ||| ||||| ||| ||||||||  ||||| |||||||    
T  21454219 ttttaaaatatctatagtcaaactttattgtgaaatgagataacaataatgcataaagattattatgtgagtagattgatgat 21454137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 298 - 365
Target Start/End: Complemental strand, 39074346 - 39074278
Alignment:
Q  298 ctagaatagttagtccatttaa-tggaacattaagtataacttaattgtgagaccccattaaacataag 365  Q
    |||||||| ||||||| ||||| | ||||||||||||| |||||||  |||||||||||||||||||||    
T  39074346 ctagaataattagtccgtttaaattgaacattaagtatgacttaatcatgagaccccattaaacataag 39074278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 164 - 213
Target Start/End: Original strand, 55992680 - 55992729
Alignment:
Q  164 ataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||||||||||||||| | ||||||||||||||  ||||||||||||    
T  55992680 ataagccctaatagccaatttgtattgattgggtttgactttgtatcatg 55992729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 438
Target Start/End: Complemental strand, 39074270 - 39074218
Alignment:
Q  386 cgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactatta 438  Q
    |||||||| ||||| ||| |||||| |||||||||||||||| ||||||||||    
T  39074270 cgtagtcatactttattgtgaagtgagatatcattaaagcatggagactatta 39074218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 5668412 - 5668371
Alignment:
Q  172 taatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||||||||||||||||||| |||| | |||||||||||    
T  5668412 taatagccaatctatattgattgtgtttggttttgtatcatg 5668371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 213
Target Start/End: Original strand, 8845118 - 8845166
Alignment:
Q  165 taagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    |||| ||||||||||||||||| ||||||| ||||  ||||||||||||    
T  8845118 taagtcctaatagccaatctatgttgattgagtttgactttgtatcatg 8845166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 213
Target Start/End: Original strand, 8858082 - 8858130
Alignment:
Q  165 taagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    |||| ||||||||||||||||| ||||||| ||||  ||||||||||||    
T  8858082 taagtcctaatagccaatctatgttgattgagtttgactttgtatcatg 8858130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 18262136 - 18262176
Alignment:
Q  173 aatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    |||||||||||||| |||| ||||||| |||||||||||||    
T  18262136 aatagccaatctatgttgaatgggtttggctttgtatcatg 18262176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 196; Significance: 1e-106; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 249 - 456
Target Start/End: Original strand, 18252030 - 18252237
Alignment:
Q  249 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 348  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18252030 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 18252129  T
Q  349 accccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 448  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18252130 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 18252229  T
Q  449 ctgatgat 456  Q
    ||||||||    
T  18252230 ctgatgat 18252237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 249 - 456
Target Start/End: Complemental strand, 18532721 - 18532514
Alignment:
Q  249 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 348  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  18532721 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagttcgtttaatggaacattaagtataacttaattgtgag 18532622  T
Q  349 accccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 448  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18532621 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtagataga 18532522  T
Q  449 ctgatgat 456  Q
    ||||||||    
T  18532521 ctgatgat 18532514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 249 - 456
Target Start/End: Complemental strand, 27131616 - 27131409
Alignment:
Q  249 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 348  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27131616 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 27131517  T
Q  349 accccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 448  Q
    ||||||||||||||||||||||||||||||||||||  |||||||| |||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  27131516 accccattaaacataaggaaactattctcaaagtatttgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtaga 27131417  T
Q  449 ctgatgat 456  Q
    ||||||||    
T  27131416 ctgatgat 27131409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 251 - 456
Target Start/End: Complemental strand, 21171438 - 21171233
Alignment:
Q  251 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 350  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||| |||||||||||||||||||    
T  21171438 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttcatggaacattaaatataacttaattgtgagac 21171339  T
Q  351 cccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 450  Q
    ||| || ||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  21171338 cccgttgaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtgggtagact 21171239  T
Q  451 gatgat 456  Q
    ||||||    
T  21171238 gatgat 21171233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 251 - 456
Target Start/End: Complemental strand, 27310782 - 27310577
Alignment:
Q  251 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 350  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  27310782 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 27310683  T
Q  351 cccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 450  Q
    | | || ||||||||||||||||||| |||||||| |||||||| |||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  27310682 cacgttgaacataaggaaactattcttaaagtatcagtagtcaagctttattgagaagtggaatatcattaaagcatagagactattatgtgggtagact 27310583  T
Q  451 gatgat 456  Q
    ||||||    
T  27310582 gatgat 27310577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 251 - 456
Target Start/End: Complemental strand, 16359240 - 16359035
Alignment:
Q  251 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 350  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||    
T  16359240 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagaataacttaattgtgagac 16359141  T
Q  351 cccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 450  Q
    ||| |||||||||||||||||||||| |||||| || ||||||| |||| ||||||| ||| ||||||||||||||||||||||||||||| ||||||||    
T  16359140 cccgttaaacataaggaaactattcttaaagtaaccctagtcaagctttattgagaaatggaatatcattaaagcatagagactattatgtgggtagact 16359041  T
Q  451 gatgat 456  Q
    ||||||    
T  16359040 gatgat 16359035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 249 - 456
Target Start/End: Complemental strand, 3856126 - 3855919
Alignment:
Q  249 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 348  Q
    ||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  3856126 acaaggcatttctttgtttattttgttttgtttcaaaataacaaagtccctagaatagttagcccgtttaatggaacattaagtataacttaattgtgag 3856027  T
Q  349 accccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 448  Q
    ||||||||||||||||||| | |||||| ||| |||  ||||||||||||| ||| |||||||||||| |||||||||| |||||||||| || ||||||    
T  3856026 accccattaaacataaggacattattcttaaaatatttgtagtcaaactttattgtgaagtgggatattattaaagcatggagactattacgtgggtaga 3855927  T
Q  449 ctgatgat 456  Q
    ||||||||    
T  3855926 ctgatgat 3855919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 255 - 456
Target Start/End: Complemental strand, 36816834 - 36816633
Alignment:
Q  255 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagacccca 354  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||  |||||||||||||||||||||| ||||||||||||| ||     
T  36816834 catttctttattgattttgttttgtttcaaaataatgaagtccctagaatagttcgtctgtttaatggaacattaagtataaattaattgtgagactccg 36816735  T
Q  355 ttaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 454  Q
    ||||||||||||| | |||||| ||||||||| ||||||| |||| ||||||||||||||| ||||||||||||||||||||||||| | ||||||||||    
T  36816734 ttaaacataaggacattattcttaaagtatccatagtcaagctttattgagaagtgggataccattaaagcatagagactattatgtggatagactgatg 36816635  T
Q  455 at 456  Q
    ||    
T  36816634 at 36816633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 249 - 456
Target Start/End: Complemental strand, 22657429 - 22657221
Alignment:
Q  249 acaaggcatttctttattgatttt-gttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtga 347  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||| ||||||||||||||||    
T  22657429 acaagacatttctttattgatttttgttttgtttcaaaataataaagttcctagaatagttagtctgtttaatggaacattaaatataacttaattgtga 22657330  T
Q  348 gaccccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtag 447  Q
    |||||| ||||||||||||| || ||||| ||||| ||  ||||||| |||| ||  ||| || ||||||||||||||||||||||||| |||| | |||    
T  22657329 gacccctttaaacataaggacacaattcttaaagtgtctctagtcaagctttattctgaaatgagatatcattaaagcatagagactatcatgtggatag 22657230  T
Q  448 actgatgat 456  Q
    |||||||||    
T  22657229 actgatgat 22657221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 255 - 456
Target Start/End: Complemental strand, 27277756 - 27277557
Alignment:
Q  255 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagacccca 354  Q
    ||||||||| ||| |||||||||||||||||||||||| |||||||||||| ||||||||||||| ||| |||| ||| | ||||||| | |||| ||      
T  27277756 catttctttgttgtttttgttttgtttcaaaataataacgtccctagaataattagtccatttaacggagcatt-agtgtgacttaatcgcgaga-cctt 27277659  T
Q  355 ttaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 454  Q
    |||| |  || || | |||||| ||||||||||||||||  |||| ||| |||  |||||| ||||||||||||||||||||||||| ||||||| ||||    
T  27277658 ttaaccgaaatgacattattcttaaagtatccgtagtcaggctttattgtgaaaagggataacattaaagcatagagactattatgtgggtagaccgatg 27277559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 456
Target Start/End: Complemental strand, 12006712 - 12006539
Alignment:
Q  283 aaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagt 382  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||| |  |||||| |||||||||||| ||||||||||| | |||| | |||      
T  12006712 aaaataataaagtccctagaatagttagtctatttaatggaatattaagtgtgccttaatcgtgagaccccatgaaacataaggacattattattaaaac 12006613  T
Q  383 atccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 456  Q
    || ||||||||| | ||  || |||| |||||| ||||||| | |||||| | ||||||   ||||||||||||    
T  12006612 attcgtagtcaagccttagtgtgaagagggataacattaaaacttagagattgttatgtgcatagactgatgat 12006539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 283 - 456
Target Start/End: Complemental strand, 12014457 - 12014284
Alignment:
Q  283 aaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagt 382  Q
    |||||||||||||| ||||||||  |||||| |||||||||| ||||||| ||| ||||| || ||| |||||||||||||| ||   |||||| |||      
T  12014457 aaaataataaagtcactagaatacatagtccgtttaatggaatattaagtgtaaattaatcgttagatcccattaaacataatgatgttattcttaaaac 12014358  T
Q  383 atccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 456  Q
    ||||||||| || ||||  || |||| ||||||  |||||||| || |||| ||||||| |||||| |||||||    
T  12014357 atccgtagttaagctttagtgtgaagagggatacgattaaagcgtaaagaccattatgtgggtagaatgatgat 12014284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 18251936 - 18251992
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  18251936 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 18251992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 18532813 - 18532757
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  18532813 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 18532757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 156 - 213
Target Start/End: Complemental strand, 27310878 - 27310821
Alignment:
Q  156 ctgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    |||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||    
T  27310878 ctgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 27310821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 156 - 213
Target Start/End: Complemental strand, 16359337 - 16359280
Alignment:
Q  156 ctgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    |||||||| ||||||||||||||||||||||||||||||||||  | |||||||||||    
T  16359337 ctgttggagtaagccctaatagccaatctatattgattgggttaggatttgtatcatg 16359280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 261 - 456
Target Start/End: Complemental strand, 9918106 - 9917918
Alignment:
Q  261 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagaccccattaaac 360  Q
    |||||||||||||||||||| ||||||||||||||| ||       |||||   |||||| |||||||||||||||||| ||   ||||  ||||||||     
T  9918106 tttattgattttgttttgttacaaaataataaagtcactt------ttagtttgtttaatcgaacattaagtataacttgatcacgaga-tccattaaat 9918014  T
Q  361 ataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 456  Q
    ||||||| | |||||| ||| ||||  |||| || |||| |||  |||||||||| |||| ||||||||||| || ||||| |||||  |||||||    
T  9918013 ataaggacattattcttaaaatatctatagttaagctttattgttaagtgggatagcattgaagcatagagaatactatgtcggtaggttgatgat 9917918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 20839750 - 20839842
Alignment:
Q  17 aaaacaaagggtgacttggactaaatttggtttacacaaatttccaaaaactttacactatggacttcaccagcttcatgttgaacgtctaga 109  Q
    |||||| || || |||||||| |||||||||||||| || |  |||||||||||||| |||||| |||||||| ||| ||| |||||||||||    
T  20839750 aaaacagagagtaacttggaccaaatttggtttacataattacccaaaaactttacattatggaattcaccaggttcgtgtcgaacgtctaga 20839842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 21171535 - 21171479
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||| ||||| |||||||||||||||||| ||||| |||| |||||||||||||    
T  21171535 tgttggagtaagctctaatagccaatctatatggattgagtttggctttgtatcatg 21171479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 155 - 213
Target Start/End: Complemental strand, 27131706 - 27131652
Alignment:
Q  155 actgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||||||||||||||||||||||||||||     |||||||| |||||||||||||    
T  27131706 actgttggaataagccctaatagccaatctat----gttgggtttggctttgtatcatg 27131652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 255 - 324
Target Start/End: Complemental strand, 30720694 - 30720625
Alignment:
Q  255 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaa 324  Q
    ||||| ||||||| |||| |||||||| ||||||||||||| ||| ||||| ||||| | ||||||||||    
T  30720694 catttttttattggttttattttgttttaaaataataaagttcctggaataattagttcgtttaatggaa 30720625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 165 - 210
Target Start/End: Complemental strand, 36816926 - 36816881
Alignment:
Q  165 taagccctaatagccaatctatattgattgggtttcgctttgtatc 210  Q
    ||||||||||||  ||||||||||||||||||||| ||||||||||    
T  36816926 taagccctaatattcaatctatattgattgggtttggctttgtatc 36816881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 3856220 - 3856164
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||| || |||||||||||||||| || ||||||||||||  ||||||||||||    
T  3856220 tgttggagtaggccctaatagccaatccatcttgattgggtttgactttgtatcatg 3856164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 157 - 209
Target Start/End: Complemental strand, 22657521 - 22657469
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtat 209  Q
    ||||||| |||||| ||||||||||| ||||||||||| |||| |||||||||    
T  22657521 tgttggagtaagccttaatagccaatatatattgattgagtttggctttgtat 22657469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 356
Target Start/End: Original strand, 3403248 - 3403325
Alignment:
Q  279 tttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagaccccatt 356  Q
    ||||||| ||||||||||  || |||||||||||   ||||||||| ||||||| | |||||| ||||||||| ||||    
T  3403248 tttcaaagtaataaagtctataaaatagttagtctgattaatggaatattaagtgtgacttaaatgtgagaccacatt 3403325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 356
Target Start/End: Complemental strand, 3443571 - 3443494
Alignment:
Q  279 tttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagaccccatt 356  Q
    ||||||| ||||||||||  || |||||||||||   ||||||||| ||||||| | |||||| ||||||||| ||||    
T  3443571 tttcaaagtaataaagtctataaaatagttagtctgattaatggaatattaagtgtgacttaaatgtgagaccacatt 3443494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 27277856 - 27277800
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||| |||||||||||||||||||||| || |||  ||||  ||||||||||||    
T  27277856 tgttggagtaagccctaatagccaatctatgttaattatgtttgactttgtatcatg 27277800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 192; Significance: 1e-104; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 249 - 456
Target Start/End: Original strand, 29327784 - 29327991
Alignment:
Q  249 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 348  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  29327784 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcagtttaatggaacattaagtataacttaattgtgag 29327883  T
Q  349 accccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 448  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29327884 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 29327983  T
Q  449 ctgatgat 456  Q
    ||||||||    
T  29327984 ctgatgat 29327991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 249 - 456
Target Start/End: Complemental strand, 11536269 - 11536062
Alignment:
Q  249 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 348  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  11536269 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtacaacttaattgtgag 11536170  T
Q  349 accccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 448  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11536169 accccattaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 11536070  T
Q  449 ctgatgat 456  Q
    ||||||||    
T  11536069 ctgatgat 11536062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 249 - 456
Target Start/End: Complemental strand, 11543187 - 11542980
Alignment:
Q  249 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 348  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||    
T  11543187 acaatgcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtcag 11543088  T
Q  349 accccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 448  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11543087 accccattaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 11542988  T
Q  449 ctgatgat 456  Q
    ||||||||    
T  11542987 ctgatgat 11542980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 251 - 456
Target Start/End: Original strand, 15152445 - 15152650
Alignment:
Q  251 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 350  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  15152445 aaggcatttctttattgagtttgttttgtttcaaaataataaagttcctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 15152544  T
Q  351 cccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 450  Q
    ||| ||||||||| |||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15152545 cccgttaaacatacggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 15152644  T
Q  451 gatgat 456  Q
    ||||||    
T  15152645 gatgat 15152650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 251 - 456
Target Start/End: Original strand, 15148144 - 15148349
Alignment:
Q  251 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 350  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||| || |||||||||||||||||||||||||||||    
T  15148144 aaggcatttctttattgagtttgttttgtttcaaaataataaagttcctagaatagttagtccgtttgattgaacattaagtataacttaattgtgagac 15148243  T
Q  351 cccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 450  Q
    ||| |||||||||||||||||||||| |||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15148244 cccgttaaacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 15148343  T
Q  451 gatgat 456  Q
    ||||||    
T  15148344 gatgat 15148349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 251 - 456
Target Start/End: Original strand, 18561009 - 18561214
Alignment:
Q  251 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 350  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||    
T  18561009 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaactgtgagac 18561108  T
Q  351 cccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 450  Q
    ||| |||||||| ||||||||||||| |||||||| |||||||| |||| |||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  18561109 cccgttaaacattaggaaactattcttaaagtatctgtagtcaagctttattgagaggtgggatatcattaaagcatagagactattatgtgggtagact 18561208  T
Q  451 gatgat 456  Q
    ||||||    
T  18561209 gatgat 18561214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 251 - 456
Target Start/End: Original strand, 12750828 - 12751033
Alignment:
Q  251 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 350  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  12750828 aaggcatttctttattgattttgttttgtttcaaagtaataaagtccctagaatagttagtccgtttaatgaaacattaagtataacttaattgtgagac 12750927  T
Q  351 cccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 450  Q
    | | |||||||||| ||||||||||| ||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||| | ||||||    
T  12750928 ctcgttaaacataaagaaactattcttaaagtatccgtagtcaagctttattgagaagttggatatcattaaagcatagagactattatgtggatagact 12751027  T
Q  451 gatgat 456  Q
    ||||||    
T  12751028 gatgat 12751033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 255 - 452
Target Start/End: Original strand, 12738542 - 12738739
Alignment:
Q  255 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagacccca 354  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||   ||||||| |||||||| ||||||||||||||||||||       
T  12738542 catttctttattgattttattttgtttcaaaataataaagtccctagaatagttagtttgtttaatgaaacattaattataacttaattgtgagaccttg 12738641  T
Q  355 ttaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactga 452  Q
    |||||||||||||||||||||| |||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  12738642 ttaaacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagactga 12738739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 251 - 456
Target Start/End: Complemental strand, 18258047 - 18257842
Alignment:
Q  251 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 350  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||| |||||||||||||||    
T  18258047 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaataattagtctgtttaatggaacattaagtatgacttaattgtgagac 18257948  T
Q  351 cccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 450  Q
    ||||||||||| ||||| | |||||| |||||||||||||||||  ||| |||  |||| ||||| || ||| ||||| |||||||||||| | |||| |    
T  18257947 cccattaaacacaaggacattattcttaaagtatccgtagtcaagtttttttgttaagtaggataacaataatgcataaagactattatgtggatagatt 18257848  T
Q  451 gatgat 456  Q
    ||||||    
T  18257847 gatgat 18257842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 255 - 437
Target Start/End: Original strand, 13392157 - 13392338
Alignment:
Q  255 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagacccca 354  Q
    ||||||||| |||| |||||||||||||||||||||||||| ||||||| | ||||||   |||||||| |||||||| | ||||||| |||||| ||||    
T  13392157 catttctttgttgactttgttttgtttcaaaataataaagttcctagaacaattagtctgcttaatggagcattaagtgtgacttaatcgtgaga-ccca 13392255  T
Q  355 ttaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactatt 437  Q
    |||||   ||||| | |||||| ||||||||  |||||||||||| ||| |||  |||||| ||||||| |||||||||||||    
T  13392256 ttaaatgaaaggacattattcttaaagtatcaatagtcaaactttattgtgaaaagggataacattaaaacatagagactatt 13392338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 456
Target Start/End: Original strand, 2364917 - 2365101
Alignment:
Q  271 ttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaac 370  Q
    ||||| |||||||||||||||||||| |||||||| ||||||  | |||||||||||||||| |  |||||| |||||| ||||||||||  || || |     
T  2364917 ttgttatgtttcaaaataataaagtctctagaataattagtctttctaatggaacattaagtgtggcttaatcgtgagaacccattaaactaaatgacat 2365016  T
Q  371 tattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 456  Q
    |||||| ||| ||| ||||||| ||| || ||| ||| || |||| ||||||| |||||||||||| |||| ||| ||||||||||    
T  2365017 tattcttaaaatattcgtagtc-aaccttattgtgaaatgagataacattaaaacatagagactatcatgtgggtcgactgatgat 2365101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 2653331 - 2653275
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    |||||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  2653331 tgttggaataagccctaatagccaatctatattgattgggattggctttgtatcatg 2653275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 282 - 441
Target Start/End: Original strand, 7396221 - 7396381
Alignment:
Q  282 caaaataataaagtccctagaatagttagtccatttaa-tggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaa 380  Q
    |||||||| || ||| |||||||||||||| ||||||| ||||||||||||||| |||||||  |||||||| |||||||||||| ||| |||||| |||    
T  7396221 caaaataaaaatgtcgctagaatagttagttcatttaaatggaacattaagtatgacttaatcttgagaccctattaaacataagaaaattattcttaaa 7396320  T
Q  381 gtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgt 441  Q
      ||  |||||||| | ||  || ||| |  |||   ||||||||||||||||||||||||    
T  7396321 acatatgtagtcaagccttagtgtgaaatacgatgatattaaagcatagagactattatgt 7396381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 11543279 - 11543223
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  11543279 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 11543223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 12738443 - 12738499
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  12738443 tgttggagtaagccctaatagccaatctatattgattgggtttggctttgtatcatg 12738499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 255 - 342
Target Start/End: Original strand, 39111819 - 39111905
Alignment:
Q  255 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaat 342  Q
    |||||||||||| |||||||||| |||||||| |||||||||||||||||||  ||||| ||||||| |||||||||||  |||||||    
T  39111819 catttctttattaattttgttttatttcaaaa-aataaagtccctagaatagcgagtccgtttaatgaaacattaagtacgacttaat 39111905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 11536361 - 11536305
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    |||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||    
T  11536361 tgttggaataagccctaatagccactctatattgattggttttggctttgtatcatg 11536305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 12750733 - 12750789
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||    
T  12750733 tgttggagtaagccctaatagctaatctatattgattgggtttggctttgtatcatg 12750789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 15152350 - 15152406
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||    
T  15152350 tgttggagtaagccctaatagccaatctatattgattgggtttggttttgtatcatg 15152406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 157 - 212
Target Start/End: Original strand, 29327690 - 29327745
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcat 212  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||    
T  29327690 tgttggagtaagccctaatagccaatctatattgattgggtttggttttgtatcat 29327745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 15148049 - 15148105
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||| ||||||||||||||||||||||||| ||||||||| | |||||||||||    
T  15148049 tgttggagtaagccctaatagccaatctatattaattgggtttggttttgtatcatg 15148105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 323 - 366
Target Start/End: Original strand, 3132748 - 3132791
Alignment:
Q  323 aacattaagtataacttaattgtgagaccccattaaacataagg 366  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  3132748 aacattaagtgtaacttaattgtgagaccccattaaacataagg 3132791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 157 - 212
Target Start/End: Original strand, 13392030 - 13392085
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcat 212  Q
    ||||||| |||||||||||| ||||||||||||||||| ||||  |||||||||||    
T  13392030 tgttggagtaagccctaatatccaatctatattgattgtgtttgactttgtatcat 13392085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 299 - 364
Target Start/End: Original strand, 10234179 - 10234244
Alignment:
Q  299 tagaatagttagtccatttaatggaacattaagtataacttaattgtgagaccccattaaacataa 364  Q
    ||||||||||||||| ||||||| | |||||| |||||||||||  |||||  |||||||||||||    
T  10234179 tagaatagttagtccgtttaatgaaccattaaatataacttaatcatgagattccattaaacataa 10234244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 156 - 213
Target Start/End: Complemental strand, 18258144 - 18258087
Alignment:
Q  156 ctgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    |||||||| |||||||| |||||||||||| ||||||||| ||| || ||||||||||    
T  18258144 ctgttggagtaagccctgatagccaatctagattgattggttttggccttgtatcatg 18258087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 249 - 281
Target Start/End: Complemental strand, 2653239 - 2653207
Alignment:
Q  249 acaaggcatttctttattgattttgttttgttt 281  Q
    |||||||||||||||||||||||||||||||||    
T  2653239 acaaggcatttctttattgattttgttttgttt 2653207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 20099723 - 20099662
Alignment:
Q  27 gtgacttggactaaatttggtttacacaaatttccaaaaactttacactatggacttcacca 88  Q
    ||||| ||||| ||||| ||||| ||||| | ||||||||| | ||||||||||||||||||    
T  20099723 gtgacctggaccaaattcggtttgcacaactatccaaaaacataacactatggacttcacca 20099662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 18560913 - 18560969
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||| |||||||| | || |||||||| ||||||||| || |||||||||||||    
T  18560913 tgttggagtaagcccttaaaggcaatctatgttgattgggcttggctttgtatcatg 18560969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 188; Significance: 1e-102; HSPs: 4)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 249 - 456
Target Start/End: Complemental strand, 7141 - 6934
Alignment:
Q  249 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 348  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  7141 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaactgtgag 7042  T
Q  349 accccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 448  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7041 accctattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 6942  T
Q  449 ctgatgat 456  Q
    ||||||||    
T  6941 ctgatgat 6934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #2
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 249 - 456
Target Start/End: Complemental strand, 14157 - 13950
Alignment:
Q  249 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 348  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||    
T  14157 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctacaatagttagtccgtttaatggaacattaagtataacttaactgtgag 14058  T
Q  349 accccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 448  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  14057 accccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtaga 13958  T
Q  449 ctgatgat 456  Q
    ||||||||    
T  13957 ctgatgat 13950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 155 - 213
Target Start/End: Complemental strand, 14251 - 14193
Alignment:
Q  155 actgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    |||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||    
T  14251 actgttggaataagccctaatagccaatctatattgattgagtttggttttgtatcatg 14193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 7233 - 7177
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    |||||||||||||||||||||||||||||||||||||| |||| | |||||||||||    
T  7233 tgttggaataagccctaatagccaatctatattgattgagtttggttttgtatcatg 7177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 188; Significance: 1e-102; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 249 - 456
Target Start/End: Original strand, 21940665 - 21940872
Alignment:
Q  249 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 348  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21940665 acaatgcatttctttattgattttgttttgtttcaaaataataaagttcctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 21940764  T
Q  349 accccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 448  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21940765 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 21940864  T
Q  449 ctgatgat 456  Q
    ||||||||    
T  21940865 ctgatgat 21940872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 251 - 450
Target Start/End: Original strand, 28554885 - 28555084
Alignment:
Q  251 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 350  Q
    |||||||||||||||||||||||||| |||||||||||||||| | |||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  28554885 aaggcatttctttattgattttgtttagtttcaaaataataaaatacctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 28554984  T
Q  351 cccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 450  Q
    |||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28554985 cccattaaacataatgaaactattctaaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 28555084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 251 - 456
Target Start/End: Original strand, 22171491 - 22171694
Alignment:
Q  251 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 350  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  22171491 aaggcatttccttattgattttgttttatttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 22171590  T
Q  351 cccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 450  Q
    |||||||||||||  ||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22171591 cccattaaacata--gaaactattctcaaagtatccgtagtcaagctttattgagaagtggaatatcattaaagcatagagactattatgtaggtagact 22171688  T
Q  451 gatgat 456  Q
    ||||||    
T  22171689 gatgat 22171694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 255 - 456
Target Start/End: Original strand, 6094129 - 6094330
Alignment:
Q  255 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagacccca 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||     
T  6094129 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 6094228  T
Q  355 ttaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 454  Q
    |||||||||||||||||||| | |||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||| | |||||| |||||    
T  6094229 ttaaacataaggaaactatttttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatatgggtagagtgatg 6094328  T
Q  455 at 456  Q
    ||    
T  6094329 at 6094330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 255 - 456
Target Start/End: Original strand, 24642655 - 24642856
Alignment:
Q  255 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagacccca 354  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||     
T  24642655 catttctttattgattttgttttgtttcaaaatcataaagtccctagaattgttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 24642754  T
Q  355 ttaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 454  Q
    |||||||||||||||||||||| ||||||| ||||||||| |||| |||||||||| ||||||||||||| |||||||||||||||| ||||||||||||    
T  24642755 ttaaacataaggaaactattcttaaagtattcgtagtcaagctttattgagaagtgagatatcattaaagtatagagactattatgtgggtagactgatg 24642854  T
Q  455 at 456  Q
    ||    
T  24642855 at 24642856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 255 - 382
Target Start/End: Original strand, 24636860 - 24636987
Alignment:
Q  255 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagacccca 354  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||     
T  24636860 catttctttcttgattttgttttgtttcaaaataataaagtccctagaatagttagtccttttaatggaacattaagtataacttaattgtgagaccccg 24636959  T
Q  355 ttaaacataaggaaactattctcaaagt 382  Q
    |||||||||||||||||||||| |||||    
T  24636960 ttaaacataaggaaactattcttaaagt 24636987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 21940571 - 21940629
Alignment:
Q  155 actgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  21940571 actgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 21940629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 22070108 - 22070164
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  22070108 tgttggaataagccctaatagccaatctatattgattgggtttggttttgtatcatg 22070164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 261 - 453
Target Start/End: Complemental strand, 38232570 - 38232380
Alignment:
Q  261 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagaccccattaaac 360  Q
    ||||||||||||||||| ||||||||||||||| || |||||||||||||||  ||||||  |   ||| ||||||||||||  ||| || |||||||||    
T  38232570 tttattgattttgttttatttcaaaataataaa-tctctagaatagttagtctgtttaataaatttttaggtataacttaatcatgacactccattaaac 38232472  T
Q  361 ataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgat 453  Q
     |||  | | |||||| |||||||  ||||||||||||| |||  ||||| ||||   |||||||||| | |||||| ||| |||||||||||    
T  38232471 gtaa-aatagtattcttaaagtatttgtagtcaaactttattgtaaagtgagatagtcttaaagcataaaaactattttgtgggtagactgat 38232380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 6094030 - 6094087
Alignment:
Q  156 ctgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    |||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||    
T  6094030 ctgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 6094087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 22171396 - 22171452
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    |||||||||||||||||||||||||||||||||||||||||||   |||||||||||    
T  22171396 tgttggaataagccctaatagccaatctatattgattgggtttgattttgtatcatg 22171452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 157 - 209
Target Start/End: Original strand, 24642556 - 24642608
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtat 209  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  24642556 tgttggagtaagccctaatagccaatctatattgattgggtttggctttgtat 24642608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 270 - 328
Target Start/End: Original strand, 2375027 - 2375085
Alignment:
Q  270 tttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacatt 328  Q
    |||||||||||||||||||||||| |||||| |||| |||||| |||||||||||||||    
T  2375027 tttgttttgtttcaaaataataaactccctataataattagtcaatttaatggaacatt 2375085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 279 - 440
Target Start/End: Complemental strand, 32873019 - 32872857
Alignment:
Q  279 tttcaaaataataaagtccctagaatagttagtccattta-atggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctc 377  Q
    ||||||||||||||||||| || |||||||  |||||||| || ||||||||||||| |||||||||||||| | |||| || | |  || | || | |     
T  32873019 tttcaaaataataaagtccttataatagttcatccatttatatagaacattaagtatgacttaattgtgagatctcattgaaaagagtgacaatactatt 32872920  T
Q  378 aaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatg 440  Q
    ||| |||  ||||| ||  ||| ||| ||||||||||| ||| ||||||||||||||||||||    
T  32872919 aaaatatttgtagttaagatttattgtgaagtgggataacatcaaagcatagagactattatg 32872857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 28554791 - 28554847
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||| |||||||||||||||||||| | |||||||||||| |||||||||||||    
T  28554791 tgttggagtaagccctaatagccaatctttgttgattgggtttggctttgtatcatg 28554847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 350
Target Start/End: Original strand, 10920234 - 10920297
Alignment:
Q  287 taataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 350  Q
    ||||||| | ||||||||| ||||||  |||||||||||||||||||| | ||||| |||||||    
T  10920234 taataaaattcctagaataattagtctgtttaatggaacattaagtatgagttaatcgtgagac 10920297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 456
Target Start/End: Complemental strand, 14984030 - 14983920
Alignment:
Q  345 tgagaccccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtagg 444  Q
    |||||||| |||||||   |||| | |||||| ||||||||  || ||||| ||| ||| ||||||||||| |||| ||| |||| ||||||||||| ||    
T  14984030 tgagacccaattaaactataggacattattcttaaagtatctataatcaaaatttattgtgaagtgggataacatt-aagaatagggactattatgtggg 14983932  T
Q  445 tagactgatgat 456  Q
    |||||| |||||    
T  14983931 tagactaatgat 14983920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 156 - 194
Target Start/End: Original strand, 24636604 - 24636642
Alignment:
Q  156 ctgttggaataagccctaatagccaatctatattgattg 194  Q
    |||||||| |||||| |||||||||||||||||||||||    
T  24636604 ctgttggagtaagccataatagccaatctatattgattg 24636642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 188; Significance: 1e-102; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 249 - 456
Target Start/End: Complemental strand, 21330455 - 21330248
Alignment:
Q  249 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 348  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21330455 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 21330356  T
Q  349 accccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 448  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||    
T  21330355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtgga 21330256  T
Q  449 ctgatgat 456  Q
    ||||||||    
T  21330255 ctgatgat 21330248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 249 - 456
Target Start/End: Original strand, 18796506 - 18796713
Alignment:
Q  249 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 348  Q
    |||||| |||| ||| || |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18796506 acaaggaatttatttgtttattttgttttgtttcaaaataacaaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 18796605  T
Q  349 accccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 448  Q
    ||| | || |||||||||| | |||||| ||| |||| |||||||| |||| ||| ||||||| ||||||||||||||| ||||||||||||| ||||||    
T  18796606 acctcttttaacataaggatattattcttaaattatctgtagtcaagctttattgtgaagtggtatatcattaaagcattgagactattatgtgggtaga 18796705  T
Q  449 ctgatgat 456  Q
    ||||||||    
T  18796706 ctgatgat 18796713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 251 - 456
Target Start/End: Original strand, 18619807 - 18620011
Alignment:
Q  251 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 350  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||  ||||||||| |||||||| | |||||||| |||||     
T  18619807 aaggaatttctttgttgattttgttttgtttcaaaataataaagtccctataataattagtctgtttaatggagcattaagtgtgacttaattatgaga- 18619905  T
Q  351 cccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 450  Q
    ||||||||||| ||||| | |||||| |||||||| || |||||||||| ||| |||  ||||||  ||||||||||| |||||||||||| ||||| |     
T  18619906 cccattaaacaaaaggatattattcttaaagtatctgtggtcaaactttattgtgaaaagggataatattaaagcatatagactattatgtgggtaggcc 18620005  T
Q  451 gatgat 456  Q
    ||||||    
T  18620006 gatgat 18620011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 255 - 395
Target Start/End: Complemental strand, 19692737 - 19692597
Alignment:
Q  255 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagacccca 354  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||  |||||||||||||||||  | |||||||  ||||| | ||    
T  19692737 catttctttattgattttgttttgtttcaaaataatgaagtccctagaataattagtctgtttaatggaacattaagcctgacttaatcatgagatctca 19692638  T
Q  355 ttaaacataaggaaactattctcaaagtatccgtagtcaaa 395  Q
    ||||||  ||||||| |||||| ||||||||| ||||||||    
T  19692637 ttaaactaaaggaaattattcttaaagtatccttagtcaaa 19692597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 315 - 441
Target Start/End: Original strand, 20977958 - 20978084
Alignment:
Q  315 tttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggat 414  Q
    ||||||||||||||||| |||| |||||  ||||| ||||||||| ||||||||| |||||| |||  |||||||||||| ||||  || |||||| |||    
T  20977958 tttaatggaacattaagaataatttaatcatgagatcccattaaaaataaggaaattattcttaaaacatccgtagtcaagctttaatgtgaagtgagat 20978057  T
Q  415 atcattaaagcatagagactattatgt 441  Q
    |||| ||||||||||||||||||||||    
T  20978058 atcactaaagcatagagactattatgt 20978084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 456
Target Start/End: Original strand, 36270199 - 36270373
Alignment:
Q  283 aaaataataaagtccctagaatagttagtccatttaa-tggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaag 381  Q
    |||||||||||||||||||||||||||||  | |||| || ||  |||||| | ||||||| |||||||  ||||||||| || || |||||||| |||     
T  36270199 aaaataataaagtccctagaatagttagtttacttaaatgaaatgttaagtgtgacttaatcgtgagacatcattaaacacaatgacactattcttaaaa 36270298  T
Q  382 tatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 456  Q
     ||||||| |||| ||||  || |||| |||||| |||||||| ||| |||||||| ||| ||||||||||||||    
T  36270299 catccgtaatcaagctttagtgtgaagagggataacattaaagtataaagactattgtgtgggtagactgatgat 36270373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 21330549 - 21330493
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  21330549 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 21330493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 369 - 456
Target Start/End: Complemental strand, 18852146 - 18852059
Alignment:
Q  369 actattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 456  Q
    |||||||| |||||||  |||||| |||||| ||| ||||| ||||| |||||||   || |||||||||||| |||||||| |||||    
T  18852146 actattcttaaagtatatgtagtccaactttattgtgaagtaggataacattaaattgtatagactattatgtcggtagactaatgat 18852059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 420 - 456
Target Start/End: Complemental strand, 12098654 - 12098618
Alignment:
Q  420 taaagcatagagactattatgtaggtagactgatgat 456  Q
    |||| |||||||||||||||||| |||||||||||||    
T  12098654 taaaacatagagactattatgtatgtagactgatgat 12098618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 19692829 - 19692773
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||| |||||| ||||||||||||| |||| ||| ||||| | |||||||||||    
T  19692829 tgttggagtaagccttaatagccaatctgtatttattaggtttggttttgtatcatg 19692773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433 (Bit Score: 180; Significance: 5e-97; HSPs: 2)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 249 - 456
Target Start/End: Original strand, 7107 - 7314
Alignment:
Q  249 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 348  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  7107 acaaggtatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatagaacattaagtataacttaattgtgag 7206  T
Q  349 accccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 448  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7207 accccattaaacataatgaaactattctaaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 7306  T
Q  449 ctgatgat 456  Q
    ||||||||    
T  7307 ctgatgat 7314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 7015 - 7071
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  7015 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 7071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 180; Significance: 5e-97; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 249 - 456
Target Start/End: Complemental strand, 26197 - 25990
Alignment:
Q  249 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 348  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  26197 acaagacatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccatttaatggaacattaaatataacttaattgtgag 26098  T
Q  349 accccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 448  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||||||| ||||||||||||||||||    
T  26097 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgaaaagtgggatatcattaaagcatagcgactattatgtaggtaga 25998  T
Q  449 ctgatgat 456  Q
    ||||||||    
T  25997 ctgatgat 25990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 157 - 212
Target Start/End: Complemental strand, 26286 - 26231
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcat 212  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  26286 tgttggaataagccctaatagtcaatctatattgattgggtttggctttgtatcat 26231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 180; Significance: 5e-97; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 249 - 456
Target Start/End: Complemental strand, 24695673 - 24695466
Alignment:
Q  249 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 348  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  24695673 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 24695574  T
Q  349 accccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 448  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||| |||| |||||||||| ||||||| |||||||||||||||||||||||||||||    
T  24695573 accccattaaacataatgaaactattctaaaagtatccgtagtcaagctttattgagaagtgagatatcaataaagcatagagactattatgtaggtaga 24695474  T
Q  449 ctgatgat 456  Q
    ||||||||    
T  24695473 ctgatgat 24695466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 249 - 456
Target Start/End: Complemental strand, 18570070 - 18569863
Alignment:
Q  249 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 348  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  18570070 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaattgaacattaagtataacttaattgtgag 18569971  T
Q  349 accccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 448  Q
    ||||| |||||||||||||||||| ||| ||||||||||||||||| |||| ||||||||||| |||||||||||||||| |||||||||||| ||||||    
T  18569970 accccgttaaacataaggaaactactcttaaagtatccgtagtcaagctttattgagaagtggaatatcattaaagcataaagactattatgttggtaga 18569871  T
Q  449 ctgatgat 456  Q
    ||||||||    
T  18569870 ctgatgat 18569863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 251 - 456
Target Start/End: Complemental strand, 19714703 - 19714498
Alignment:
Q  251 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 350  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19714703 aaggcatttctttattgattttgttttatttcaaagtaataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 19714604  T
Q  351 cccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 450  Q
    ||| |||||||||||||| ||||||| ||| |||||| |||||| |||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  19714603 cccgttaaacataaggaatctattcttaaaatatccgaagtcaagctttattgagaagtaggatatcattaaagcatagagactattatgtgggtagact 19714504  T
Q  451 gatgat 456  Q
    ||||||    
T  19714503 gatgat 19714498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 255 - 456
Target Start/End: Complemental strand, 19707419 - 19707218
Alignment:
Q  255 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagacccca 354  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||     
T  19707419 catttctttattgattttgttttatttcaaagtaataaagtccctagaatagttagtcagtttaatggaacattaagtataacttaattgtgagaccccg 19707320  T
Q  355 ttaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 454  Q
    |||||||||||||| ||||||| ||| |||||| |||||| |||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  19707319 ttaaacataaggaatctattcttaaaatatccgaagtcaagctttattgagaagtaggatatcattaaagcatagagactattatgtgggtagactgatg 19707220  T
Q  455 at 456  Q
    ||    
T  19707219 at 19707218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 255 - 456
Target Start/End: Complemental strand, 22547217 - 22547016
Alignment:
Q  255 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagacccca 354  Q
    ||||| |||||| |||||||||| ||| |||||||||||  | ||| |||||||||||  |||||||||||||||||||||||||||| |||||| | ||    
T  22547217 catttatttattcattttgttttattttaaaataataaaaccgctataatagttagtcggtttaatggaacattaagtataacttaatcgtgagatctca 22547118  T
Q  355 ttaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 454  Q
    ||||| ||| ||| | |||| | ||||||| || ||||||||||| ||| |||||| |||| |||||||  |||||||||||||||| | ||||| ||||    
T  22547117 ttaaatatatggacattatttttaaagtattcgcagtcaaactttattgtgaagtgagataacattaaaatatagagactattatgtggatagaccgatg 22547018  T
Q  455 at 456  Q
    ||    
T  22547017 at 22547016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 254 - 437
Target Start/End: Complemental strand, 27347679 - 27347497
Alignment:
Q  254 gcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagacccc 353  Q
    |||||||||| |||||||||||||| |||||||||||||||||| ||||||| ||| ||  ||||||||| |||||||| | ||||||| |||||| |||    
T  27347679 gcatttctttgttgattttgttttgattcaaaataataaagtccttagaataattaatctgtttaatggagcattaagtgtgacttaatcgtgaga-ccc 27347581  T
Q  354 attaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactatt 437  Q
    |||||||  ||||| | |||||| |||||||  |||||||| |||| ||| |||  |||||| |||||||||||||||||||||    
T  27347580 attaaacgaaaggacattattcttaaagtatatgtagtcaagctttattgtgaaaagggataacattaaagcatagagactatt 27347497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 249 - 358
Target Start/End: Original strand, 39537962 - 39538071
Alignment:
Q  249 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 348  Q
    ||||| |||||||||| ||||||||||||||||||||||  | |||||| |||||||||| || | ||||||||||||||||||||||||||||||||||    
T  39537962 acaagccatttctttaatgattttgttttgtttcaaaatggttaagtccttagaatagttggttcgtttaatggaacattaagtataacttaattgtgag 39538061  T
Q  349 accccattaa 358  Q
    ||| ||||||    
T  39538062 acctcattaa 39538071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 253 - 434
Target Start/End: Complemental strand, 17285935 - 17285754
Alignment:
Q  253 ggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagaccc 352  Q
    ||||||| ||||||||||||||| ||||||||||||||||  |||  |||||||||||||  |||||||||||||||||| | ||||||| |||| ||||    
T  17285935 ggcatttatttattgattttgttatgtttcaaaataataatctccagagaatagttagtctgtttaatggaacattaagtgtgacttaatcgtgaaaccc 17285836  T
Q  353 cattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagact 434  Q
     | |||||  || || | |||||| ||||||| | ||||| | |||| ||| ||| |||||||  ||||||||||| |||||    
T  17285835 tagtaaactaaatgacattattcttaaagtattcatagtcgatctttattgtgaattgggatagtattaaagcatatagact 17285754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 255 - 358
Target Start/End: Original strand, 31886537 - 31886640
Alignment:
Q  255 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagacccca 354  Q
    |||||||||| |||||||||||||||||||| ||||||||||| ||||||| ||||| |||||||| |||||| |||||  ||||||| ||||||| |||    
T  31886537 catttctttagtgattttgttttgtttcaaattaataaagtccttagaataattagttcatttaattgaacatcaagtacgacttaatcgtgagactcca 31886636  T
Q  355 ttaa 358  Q
    ||||    
T  31886637 ttaa 31886640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 24695765 - 24695709
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  24695765 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 24695709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 314 - 456
Target Start/End: Complemental strand, 18807176 - 18807034
Alignment:
Q  314 atttaatggaacattaagtataacttaattgtgagaccccattaaacataa-ggaaactattctcaaagtatccgtagtcaaactttgttgagaagtggg 412  Q
    ||||||||||||||||||| | ||||||| ||||||| |||||||| |||| ||| | |||||| ||||||||  ||||||| | || ||| |||||  |    
T  18807176 atttaatggaacattaagtgtgacttaatcgtgagacaccattaaa-ataatggacattattcttaaagtatctatagtcaagcgttattgtgaagtaag 18807078  T
Q  413 atatcattaaagcatagagactattatgtaggtagactgatgat 456  Q
    ||| || |||||||||||||||||||||  ||||||||||||||    
T  18807077 ataacaataaagcatagagactattatgcgggtagactgatgat 18807034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 155 - 213
Target Start/End: Complemental strand, 19714800 - 19714742
Alignment:
Q  155 actgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  19714800 actgttggagtaagccctaatagccaatctatattgattgggtttggctttgtatcatg 19714742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 253 - 434
Target Start/End: Complemental strand, 17299088 - 17298907
Alignment:
Q  253 ggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagaccc 352  Q
    ||||||| ||||||||||||||| |||||  |||||||||  |||  ||||||||||||||  |||||||||||||||||   ||||||| |||| ||||    
T  17299088 ggcatttatttattgattttgttatgtttataaataataatatccagagaatagttagtccgattaatggaacattaagtgcgacttaatcgtgaaaccc 17298989  T
Q  353 cattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagact 434  Q
     | |||||  || || | |||||| ||||||| | ||||| | |||| |||  ||||||||||  ||||||||||| |||||    
T  17298988 tagtaaactaaatgacattattcttaaagtattcatagtcgatctttattgttaagtgggatagtattaaagcatatagact 17298907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 17 - 150
Target Start/End: Original strand, 23007241 - 23007378
Alignment:
Q  17 aaaacaaagggtgacttggactaaatttggtttacacaaatttcc----aaaaactttacactatggacttcaccagcttcatgttgaacgtctagatac 112  Q
    |||||||||||||||||||||||||||| |||||||||| | |||    |||||   | |||| |||||||||| || ||  ||||||| ||||||||||    
T  23007241 aaaacaaagggtgacttggactaaatttagtttacacaattatccaaaaaaaaaaaatgcactctggacttcactaggtttgtgttgaatgtctagatac 23007340  T
Q  113 taatcttccatcaggtgatatacataagagtattgtat 150  Q
    | ||||||||  |||||| ||| |||||||||||||||    
T  23007341 tgatcttccagtaggtgacatatataagagtattgtat 23007378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 362 - 454
Target Start/End: Original strand, 39538701 - 39538793
Alignment:
Q  362 taaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 454  Q
    |||||| |||||||| ||| ||||| |||| || |||| ||| |||||||||||||||||||||||  |||||||||||| ||||||||||||    
T  39538701 taaggacactattcttaaaatatccatagttaagctttattgtgaagtgggatatcattaaagcatgaagactattatgtgggtagactgatg 39538793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 156 - 213
Target Start/End: Complemental strand, 27347779 - 27347722
Alignment:
Q  156 ctgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    |||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||    
T  27347779 ctgttggagtaagccctaatagccaatctatattgattgcgtttggctttgtatcatg 27347722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 19707518 - 19707462
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||    
T  19707518 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 19707462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 157 - 212
Target Start/End: Original strand, 39537870 - 39537925
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcat 212  Q
    ||||||| |||||||||||||||||||||| |||| || |||| ||||||||||||    
T  39537870 tgttggattaagccctaatagccaatctatgttgactgagtttagctttgtatcat 39537925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 365
Target Start/End: Complemental strand, 33477479 - 33477389
Alignment:
Q  275 tttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagaccccattaaacataag 365  Q
    ||||||||||||||||||||||| || ||||||||| |   |||||||| |||||||| | |  |||| |||||||| |||||| ||||||    
T  33477479 tttgtttcaaaataataaagtccttacaatagttaggctgattaatggatcattaagtgtgatctaatcgtgagacctcattaatcataag 33477389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 18570156 - 18570108
Alignment:
Q  165 taagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||| |||||||| |||||||||| ||||||||| |||||||||||||    
T  18570156 taagctctaatagctaatctatattaattgggtttggctttgtatcatg 18570108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657 (Bit Score: 176; Significance: 1e-94; HSPs: 2)
Name: scaffold0657
Description:

Target: scaffold0657; HSP #1
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 249 - 456
Target Start/End: Original strand, 993 - 1200
Alignment:
Q  249 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 348  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||    
T  993 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctaaaatagttagtccgtttaatgaaacattaagtataacttaattgtgag 1092  T
Q  349 accccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 448  Q
    |||||||||||||||| |||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1093 accccattaaacataaagaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 1192  T
Q  449 ctgatgat 456  Q
    ||||||||    
T  1193 ctgatgat 1200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 901 - 957
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  901 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 158; Significance: 7e-84; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 251 - 456
Target Start/End: Original strand, 5531 - 5736
Alignment:
Q  251 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 350  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  5531 aaggcatttctttattgatttatttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 5630  T
Q  351 cccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 450  Q
    ||| ||||||||||||||| |||||| |||||||  |||||||| |||| |||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  5631 cccgttaaacataaggaaattattcttaaagtatatgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtgggtagact 5730  T
Q  451 gatgat 456  Q
    ||||||    
T  5731 gatgat 5736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 165 - 213
Target Start/End: Original strand, 5444 - 5492
Alignment:
Q  165 taagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||    
T  5444 taagccctaatagccaatctatattgtttgggtttggctttgtatcatg 5492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 130; Significance: 3e-67; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 251 - 432
Target Start/End: Complemental strand, 230545 - 230365
Alignment:
Q  251 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgagac 350  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  230545 aaggcatttctttattgattttgttttgtttcaaaataataaagttcttataatagttagtccgtttaatggaacattaagtataacttaattgtgagac 230446  T
Q  351 cccattaaacataaggaaactattctcaaagtatccgtagtcaaactttgttgagaagtgggatatcattaaagcatagaga 432  Q
    ||| |||||||||||||||| ||||| |||||||  ||||||||  ||| ||||||||||||||||||||||||||||||||    
T  230445 ccc-ttaaacataaggaaaccattcttaaagtatttgtagtcaagatttattgagaagtgggatatcattaaagcatagaga 230365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 156 - 213
Target Start/End: Complemental strand, 230641 - 230584
Alignment:
Q  156 ctgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    |||||||| |||||  |||||||||||||||||||||||||||| |||||||||||||    
T  230641 ctgttggagtaagcaataatagccaatctatattgattgggtttggctttgtatcatg 230584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 61; Significance: 5e-26; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 249 - 313
Target Start/End: Complemental strand, 8510 - 8446
Alignment:
Q  249 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcc 313  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8510 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcc 8446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 8602 - 8546
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  8602 tgttggaataagccctaatagccaatctatattgattgggttcggctttgtatcatg 8546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 23825 - 23769
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  23825 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 23769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 49; Significance: 8e-19; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 16523 - 16579
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  16523 tgttggaataagccctaatagccaatctatattgattgggtttggctttatatcatg 16579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 282
Target Start/End: Original strand, 16615 - 16648
Alignment:
Q  249 acaaggcatttctttattgattttgttttgtttc 282  Q
    |||||||||||||||||||||||||||||| |||    
T  16615 acaaggcatttctttattgattttgttttgnttc 16648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0637 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 8943 - 9000
Alignment:
Q  156 ctgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    |||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||    
T  8943 ctgttggaataagcccaaatagccaatctatgttgaatgggtttggctttgtatcatg 9000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0705 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0705
Description:

Target: scaffold0705; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 97 - 41
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    ||||||||||||||||||||||||||||||| ||||||  ||| |||||||||||||    
T  97 tgttggaataagccctaatagccaatctataatgattgattttggctttgtatcatg 41  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 155 - 193
Target Start/End: Complemental strand, 39 - 1
Alignment:
Q  155 actgttggaataagccctaatagccaatctatattgatt 193  Q
    |||||||||||||||||||||||||||||||||||||||    
T  39 actgttggaataagccctaatagccaatctatattgatt 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 150 - 213
Target Start/End: Complemental strand, 10265 - 10202
Alignment:
Q  150 ttctaactgttggaataagccctaatagccaatctatattgattgggtttcgctttgtatcatg 213  Q
    |||| ||| ||||| ||||| |||||||||||||||||||||||| ||||  ||||||||||||    
T  10265 ttctgactattggagtaagctctaatagccaatctatattgattgagtttgactttgtatcatg 10202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 299
Target Start/End: Complemental strand, 10158 - 10127
Alignment:
Q  268 attttgttttgtttcaaaataataaagtccct 299  Q
    ||||||||||||||||||||||||||||||||    
T  10158 attttgttttgtttcaaaataataaagtccct 10127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 350
Target Start/End: Original strand, 92194 - 92267
Alignment:
Q  278 gtttcaaaataataaagtccctagaatagttagtccatttaa-tggaacattaagtataacttaattgtgagac 350  Q
    |||| ||| |||||||||| ||||||||  ||||   ||||| ||||||||||||||||||||||| |||||||    
T  92194 gttttaaagtaataaagtctctagaatatctagttattttaaatggaacattaagtataacttaatcgtgagac 92267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 157 - 209
Target Start/End: Original strand, 5878 - 5930
Alignment:
Q  157 tgttggaataagccctaatagccaatctatattgattgggtttcgctttgtat 209  Q
    ||||||| |||| | ||||||||||||||||||||||| ||||  ||||||||    
T  5878 tgttggagtaagtcataatagccaatctatattgattgagtttgactttgtat 5930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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