View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16521_low_4 (Length: 652)

Name: NF16521_low_4
Description: NF16521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16521_low_4
NF16521_low_4
[»] chr5 (9 HSPs)
chr5 (1-635)||(33986194-33986829)
chr5 (110-179)||(33985926-33985995)
chr5 (218-308)||(33985796-33985886)
chr5 (249-308)||(17361933-17361992)
chr5 (249-308)||(41485669-41485727)
chr5 (250-307)||(39298421-39298478)
chr5 (227-296)||(34396960-34397029)
chr5 (267-307)||(15238979-15239019)
chr5 (227-307)||(36193582-36193662)
[»] chr2 (5 HSPs)
chr2 (9-74)||(42526895-42526960)
chr2 (230-307)||(34997060-34997137)
chr2 (208-308)||(24853671-24853768)
chr2 (235-307)||(40260933-40261005)
chr2 (235-307)||(40500551-40500623)
[»] chr8 (7 HSPs)
chr8 (220-307)||(13987326-13987413)
chr8 (222-301)||(28009200-28009279)
chr8 (222-301)||(28066503-28066582)
chr8 (208-309)||(30943626-30943725)
chr8 (220-301)||(18839027-18839108)
chr8 (250-307)||(19923472-19923529)
chr8 (213-309)||(35588940-35589036)
[»] chr3 (5 HSPs)
chr3 (228-309)||(46181242-46181323)
chr3 (218-310)||(11265926-11266018)
chr3 (245-308)||(19405871-19405934)
chr3 (269-306)||(9194363-9194400)
chr3 (269-310)||(23537754-23537795)
[»] chr1 (2 HSPs)
chr1 (112-179)||(43540482-43540554)
chr1 (220-309)||(42506229-42506318)
[»] chr4 (1 HSPs)
chr4 (248-308)||(28998885-28998945)
[»] scaffold0260 (1 HSPs)
scaffold0260 (220-308)||(20005-20094)
[»] chr6 (1 HSPs)
chr6 (220-307)||(34448225-34448313)


Alignment Details
Target: chr5 (Bit Score: 497; Significance: 0; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 497; E-Value: 0
Query Start/End: Original strand, 1 - 635
Target Start/End: Original strand, 33986194 - 33986829
Alignment:
Q  1 aagttaaccaggggaagaacaacccctataatcatccatcaacacggaaactaaaagaggaaaagaaacataaaaaacattccaacaagagtggataggg 100  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  33986194 aagttaaccaggggaagaacaaaccctataatcatcgatcaacacggaaactaaaagaggagaagaaacataaaaaacattccaacaagagtggataggg 33986293  T
Q  101 gggagagtccatgttatgaaagaagaatggatagggggaagagttcacacaacaatggagggggaataattcaatttgtcacgttgggatttttcagcac 200  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||    
T  33986294 gggagagtccatgttatgaaagaagagtggatggggggaagagttcacacaacaatggagggagaataattcaatttgtcacgttgagatttttaagcac 33986393  T
Q  201 ccagcgttcacgctggctataacacctgcgtgacttaagtcaggtagaggtattttaggaagtgtggttgggagtgagcgatttttaatgggagaagagc 300  Q
     ||| |||||| | | |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33986394 acagtgttcacaccgactataacacctgcgtgacttaaatcaggtggaggtattttaggaagtgtggttgggagtgagcgatttttaatgggagaagagc 33986493  T
Q  301 aattttcttaatgttatttagacctagtggttggagaatacgagtgacccaaaaaccatatctctagttttatggagagaaattgtatatttttccaata 400  Q
    |||||||||||||||| |||||||||||||||||||||||  |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  33986494 aattttcttaatgtta-ttagacctagtggttggagaataatagtggcccaaaaatcatatctctagttttatggagagaaattgtatatttttccaata 33986592  T
Q  401 gtagaatttaagatgatatggaataaaatgtcatttcagttcaaattat--nnnnnnntattctctctccaaatttccccatattagggtggagttaaat 498  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||         |||||| |||||||||||||||||||||||||||||||||||    
T  33986593 gtagaatttaagatgatatggaataaaatgtcatttcagttcaaattataaaaaaaaatattctttctccaaatttccccatattagggtggagttaaat 33986692  T
Q  499 tatcttttggtaggattgtttggtcgatgattccatgatataggaatttcatgcaacttcactatgcagtggattttaacttattgatttgagatcggac 598  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||   | |||||||||||||||||||||||||||||||||    
T  33986693 tatcttttggtaggattgtttggtcgatgattccatgatgtaggaatttcatgcaacttcacgtagtagtggattttaacttattgatttgagatcggac 33986792  T
Q  599 aattcaaatttcaaactcaattttatgtagtaaaata 635  Q
    |||||||||||||||||||||||||||||||||||||    
T  33986793 aattcaaatttcaaactcaattttatgtagtaaaata 33986829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 110 - 179
Target Start/End: Complemental strand, 33985995 - 33985926
Alignment:
Q  110 catgttatgaaagaagaatggatagggggaagagttcacacaacaatggagggggaataattcaatttgt 179  Q
    ||||||||||||||||| |||| ||||| ||||| ||||||||||||| |||||||| ||||||||||||    
T  33985995 catgttatgaaagaagagtggagaggggcaagagctcacacaacaatgtagggggaagaattcaatttgt 33985926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 218 - 308
Target Start/End: Complemental strand, 33985886 - 33985796
Alignment:
Q  218 tataacacctgcgtgacttaagtcaggtagaggtattttaggaagtgtggttgggagtgagcgatttttaatgggagaagagcaattttct 308  Q
    ||||||| ||||||||||||||||| |  | | |||||||  |||| || |||||||| |||||||||| ||||| |||||||||||||||    
T  33985886 tataacatctgcgtgacttaagtcacgcggggctattttaaaaagtttgattgggagttagcgattttttatgggtgaagagcaattttct 33985796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 249 - 308
Target Start/End: Original strand, 17361933 - 17361992
Alignment:
Q  249 ggtattttaggaagtgtggttgggagtgagcgatttttaatgggagaagagcaattttct 308  Q
    |||||||| |||||| || | ||||||||||||||||| |||| ||||||||||||||||    
T  17361933 ggtattttgggaagtttgatagggagtgagcgattttttatggaagaagagcaattttct 17361992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 249 - 308
Target Start/End: Original strand, 41485669 - 41485727
Alignment:
Q  249 ggtattttaggaagtgtggttgggagtgagcgatttttaatgggagaagagcaattttct 308  Q
    |||||||| |||||| ||||||||||||||| |||||| ||| |||||||||||||||||    
T  41485669 ggtatttt-ggaagtttggttgggagtgagccatttttgatgtgagaagagcaattttct 41485727  T

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Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 250 - 307
Target Start/End: Complemental strand, 39298478 - 39298421
Alignment:
Q  250 gtattttaggaagtgtggttgggagtgagcgatttttaatgggagaagagcaattttc 307  Q
    |||||||||||| | | ||||||||||||| |||||| |||| |||||||||||||||    
T  39298478 gtattttaggaaatttagttgggagtgagcaattttttatggaagaagagcaattttc 39298421  T

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Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 296
Target Start/End: Original strand, 34396960 - 34397029
Alignment:
Q  227 tgcgtgacttaagtcaggtagaggtattttaggaagtgtggttgggagtgagcgatttttaatgggagaa 296  Q
    |||||||||||||||| | ||  ||||||| | |||| |||||||||| |||| |||||||||| |||||    
T  34396960 tgcgtgacttaagtcatgcaggtgtattttcgaaagtttggttgggagggagcaatttttaatgagagaa 34397029  T

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Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 267 - 307
Target Start/End: Original strand, 15238979 - 15239019
Alignment:
Q  267 gttgggagtgagcgatttttaatgggagaagagcaattttc 307  Q
    |||||||||||||| |||||  |||||||||||||||||||    
T  15238979 gttgggagtgagcgttttttgttgggagaagagcaattttc 15239019  T

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Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 227 - 307
Target Start/End: Original strand, 36193582 - 36193662
Alignment:
Q  227 tgcgtgacttaagtcaggtagaggtattttaggaagtgtggttgggagtgagcgatttttaatgggagaagagcaattttc 307  Q
    ||||||| |||| ||| | ||||||| ||| |||||| |||||||||| |||| ||| ||  ||||||||||||| |||||    
T  36193582 tgcgtgagttaactcatgcagaggtactttcggaagtttggttgggagagagcaattgttgttgggagaagagcatttttc 36193662  T

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Target: chr2 (Bit Score: 54; Significance: 1e-21; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 42526960 - 42526895
Alignment:
Q  9 caggggaagaacaacccctataatcatccatcaacacggaaactaaaagaggaaaagaaacataaa 74  Q
    ||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  42526960 caggggaagaagaaccccgataatcatccatcaaaacggaaactaaaagaggaaaagaaacataaa 42526895  T

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Target: chr2; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 230 - 307
Target Start/End: Original strand, 34997060 - 34997137
Alignment:
Q  230 gtgacttaagtcaggtagaggtattttaggaagtgtggttgggagtgagcgatttttaatgggagaagagcaattttc 307  Q
    ||||||||||||| |  |||||||||| |||||| ||||||||||||| | | |||||||||||||||||||||||||    
T  34997060 gtgacttaagtcatgcggaggtatttttggaagtttggttgggagtgaacaaattttaatgggagaagagcaattttc 34997137  T

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Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 208 - 308
Target Start/End: Complemental strand, 24853768 - 24853671
Alignment:
Q  208 tcacgctggctataacacctgcgtgacttaagtcaggtagaggtattttaggaagtgtggttgggagtgagcgatttttaatgggagaagagcaattttc 307  Q
    ||||||||  |||||||||||||| |||||| ||| |  | ||||||||  ||||| |||||||||   |||||||||| ||||||||||||||||||||    
T  24853768 tcacgctgaatataacacctgcgttacttaaatcacgcgggggtattttgagaagtttggttggga---agcgatttttgatgggagaagagcaattttc 24853672  T

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Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 235 - 307
Target Start/End: Original strand, 40260933 - 40261005
Alignment:
Q  235 ttaagtcaggtagaggtattttaggaagtgtggttgggagtgagcgatttttaatgggagaagagcaattttc 307  Q
    |||||||| ||||||||||||| ||||||  |||| ||||||||| |||| |   | ||||||||||||||||    
T  40260933 ttaagtcacgtagaggtattttgggaagttcggtttggagtgagcaatttatgtcgagagaagagcaattttc 40261005  T

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Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 235 - 307
Target Start/End: Complemental strand, 40500623 - 40500551
Alignment:
Q  235 ttaagtcaggtagaggtattttaggaagtgtggttgggagtgagcgatttttaatgggagaagagcaattttc 307  Q
    |||||||| ||||||||||||| | ||||  |||||||||||||| |||| |   | ||||||||||||||||    
T  40500623 ttaagtcacgtagaggtattttggaaagttcggttgggagtgagcaatttatgtcgagagaagagcaattttc 40500551  T

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Target: chr8 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 220 - 307
Target Start/End: Complemental strand, 13987413 - 13987326
Alignment:
Q  220 taacacctgcgtgacttaagtcaggtagaggtattttaggaagtgtggttgggagtgagcgatttttaatgggagaagagcaattttc 307  Q
    ||||||||||||||||||||| | || |  ||||||| | |||| ||||||| ||||||| |||||| ||||||||||||||||||||    
T  13987413 taacacctgcgtgacttaagttacgtgggagtattttggaaagtttggttggaagtgagcaatttttgatgggagaagagcaattttc 13987326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 28009200 - 28009279
Alignment:
Q  222 acacctgcgtgacttaagtcaggtagaggtattttaggaagtgtggttgggagtgagcgatttttaatgggagaagagca 301  Q
    |||||||||||| |||| ||| | || |||||||| | |||| |||||||||| |||| |||||| ||||||||||||||    
T  28009200 acacctgcgtgagttaactcacgcaggggtatttttgaaagtttggttgggagcgagcaatttttgatgggagaagagca 28009279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 28066503 - 28066582
Alignment:
Q  222 acacctgcgtgacttaagtcaggtagaggtattttaggaagtgtggttgggagtgagcgatttttaatgggagaagagca 301  Q
    |||||||||||| |||| ||| | || |||||||| | |||| |||||||||| |||| |||||| ||||||||||||||    
T  28066503 acacctgcgtgagttaactcacgcaggggtatttttgaaagtttggttgggagcgagcaatttttgatgggagaagagca 28066582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 208 - 309
Target Start/End: Original strand, 30943626 - 30943725
Alignment:
Q  208 tcacgctggctataacacctgcgtgacttaagtcaggtagaggtattttaggaagtgtggttgggagtgagcgatttttaatgggagaagagcaattttc 307  Q
    ||||||||| | |||||| ||||||| |||||||| || | |  ||||| | |||| ||||||||||||| | ||||||||||||||| |  ||||||||    
T  30943626 tcacgctgggtttaacacatgcgtgaattaagtcacgtgggg--attttggaaagtttggttgggagtgaacaatttttaatgggagagggacaattttc 30943723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 301
Target Start/End: Original strand, 18839027 - 18839108
Alignment:
Q  220 taacacctgcgtgacttaagtcaggtagaggtattttaggaagtgtggttgggagtgagcgatttttaatgggagaagagca 301  Q
    |||||| |||||||||||| ||| | || |||||||| |||||| ||| ||||||||||| | ||||| |  ||||||||||    
T  18839027 taacacatgcgtgacttaactcatgcaggggtattttcggaagtttggatgggagtgagcaaattttattatgagaagagca 18839108  T

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Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 307
Target Start/End: Original strand, 19923472 - 19923529
Alignment:
Q  250 gtattttaggaagtgtggttgggagtgagcgatttttaatgggagaagagcaattttc 307  Q
    ||||||| | |||| |||||||||||||||  |||||  |||||||||||||||||||    
T  19923472 gtattttggaaagtttggttgggagtgagctttttttgttgggagaagagcaattttc 19923529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 35588940 - 35589036
Alignment:
Q  213 ctggctataacacctgcgtgacttaagtcaggtagaggtattttaggaagtgtggttgggagtgagcgatttttaatgggagaagagcaattttctt 309  Q
    |||| |||||||||| || ||||||||||| || |||||||||| |  ||| ||  | |||||||| ||||||  || | |||||||||||||||||    
T  35588940 ctgggtataacacctacgcgacttaagtcatgtggaggtattttcgttagtttgtataggagtgagagattttcgatagaagaagagcaattttctt 35589036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000004; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 228 - 309
Target Start/End: Complemental strand, 46181323 - 46181242
Alignment:
Q  228 gcgtgacttaagtcaggtagaggtattttaggaagtgtggttgggagtgagcgatttttaatgggagaagagcaattttctt 309  Q
    ||||||||||||||| || ||| |||||| | |||| | |||| |||||||| | |||| ||||||||||||||||||||||    
T  46181323 gcgtgacttaagtcacgtggagatattttcgaaagttttgttgagagtgagcaaattttgatgggagaagagcaattttctt 46181242  T

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Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 218 - 310
Target Start/End: Original strand, 11265926 - 11266018
Alignment:
Q  218 tataacacctgcgtgacttaagtcaggtagaggtattttaggaagtgtggttgggagtgagcgatttttaatgggagaagagcaattttctta 310  Q
    ||||||||||||||||||||||||| ||||  ||||||| |||||| ||||||||| || || || | |  ||||||||||  ||||||||||    
T  11265926 tataacacctgcgtgacttaagtcacgtaggagtattttgggaagtttggttgggattgtgcaatgtctgttgggagaagaataattttctta 11266018  T

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Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 245 - 308
Target Start/End: Original strand, 19405871 - 19405934
Alignment:
Q  245 tagaggtattttaggaagtgtggttgggagtgagcgatttttaatgggagaagagcaattttct 308  Q
    ||||||||||||  ||||| ||||||||| |||||||   ||||||||||||||||| ||||||    
T  19405871 tagaggtattttgagaagtttggttgggaatgagcgaaacttaatgggagaagagcagttttct 19405934  T

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Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 306
Target Start/End: Original strand, 9194363 - 9194400
Alignment:
Q  269 tgggagtgagcgatttttaatgggagaagagcaatttt 306  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  9194363 tgggagtgagcaattttgaatgggagaagagcaatttt 9194400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 310
Target Start/End: Complemental strand, 23537795 - 23537754
Alignment:
Q  269 tgggagtgagcgatttttaatgggagaagagcaattttctta 310  Q
    ||||||||||| |||||  |||||||||||||||||||||||    
T  23537795 tgggagtgagcaattttatatgggagaagagcaattttctta 23537754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 43540482 - 43540554
Alignment:
Q  112 tgttatgaaagaagaatggatagggggaagagttcacaca-----acaatggagggggaataattcaatttgt 179  Q
    ||||||||||||||| |||| |||||||||||||||| ||     ||||||||||||||| ||||||||||||    
T  43540482 tgttatgaaagaagagtggagagggggaagagttcacgcagcacgacaatggagggggaagaattcaatttgt 43540554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 309
Target Start/End: Complemental strand, 42506318 - 42506229
Alignment:
Q  220 taacacctgcgtgacttaagtcaggtagaggtattttaggaagtgtggttgggagtgagcgatttttaatgggagaagagcaattttctt 309  Q
    |||||| ||||||| |||| ||| | ||||||||||| || ||| | ||||||| |||| ||   || ||||||||||||||||||||||    
T  42506318 taacacatgcgtgagttaactcatgcagaggtattttgggtagtttagttgggaatgagtgaaacttgatgggagaagagcaattttctt 42506229  T

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Target: chr4 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 248 - 308
Target Start/End: Complemental strand, 28998945 - 28998885
Alignment:
Q  248 aggtattttaggaagtgtggttgggagtgagcgatttttaatgggagaagagcaattttct 308  Q
    ||||||||| |||||| ||||||||||||| | |||||| | ||||||| |||||||||||    
T  28998945 aggtattttgggaagtttggttgggagtgaacaatttttgaagggagaaaagcaattttct 28998885  T

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Target: scaffold0260 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 308
Target Start/End: Complemental strand, 20094 - 20005
Alignment:
Q  220 taacacctgcgtgacttaagtcaggtagaggtattttaggaagtgtggttgggagtgagcgatttttaatgggagaa-gagcaattttct 308  Q
    ||||| |||||| | |||||||| || |||||||||| |||||| ||||||||||| | | |||| | || |||||| ||||||||||||    
T  20094 taacatctgcgtaagttaagtcacgtggaggtattttgggaagtttggttgggagtaaacaatttctgattggagaatgagcaattttct 20005  T

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Target: chr6 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 220 - 307
Target Start/End: Complemental strand, 34448313 - 34448225
Alignment:
Q  220 taacacctgcgtgacttaagtca-ggtagaggtattttaggaagtgtggttgggagtgagcgatttttaatgggagaagagcaattttc 307  Q
    ||||||||||||||||||||||| | | | |||||||| ||||||   |||| |||||| | | | || ||||||||||||||||||||    
T  34448313 taacacctgcgtgacttaagtcacgttgggggtattttcggaagttcagttgtgagtgaccaaatcttgatgggagaagagcaattttc 34448225  T

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