View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16521_low_7 (Length: 587)
Name: NF16521_low_7
Description: NF16521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16521_low_7 |
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Alignment Details
Target: chr8 (Bit Score: 504; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 504; E-Value: 0
Query Start/End: Original strand, 1 - 571
Target Start/End: Original strand, 34094874 - 34095444
Alignment:
| Q |
1 |
caagaatgaaacatgttgaccactttttgtttgccatatttcaaaaggtatatgtactggcagccaggggcacaaccaaaaagcatgccagcagcaattc |
100 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34094874 |
caagaatgaaacatgctgaccactttttgtttgccatatttcaaaaggtatatgtactggcagccaggggcacaaccaaaaagcatgccagcagcaattc |
34094973 |
T |
|
| Q |
101 |
agatcttttctcttgaccatgttttgggtgacaaaatggattccaacatatcaaaagggaaaatcccattaggggtttcgtttcaatagtaagacatgtt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |
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| T |
34094974 |
agatcttttctcttgaccatgttttgggtgacaaaatggattccaacatatcaaaagggaaaatcccattaggagttttgtttcaatagtaagacatgtt |
34095073 |
T |
|
| Q |
201 |
tcctaattaatcacatactaatcatttatgtattatcctggttagtgaaaatggacctacatcttgtcttttaattgaattaattaaatattgattaaaa |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34095074 |
tcctaattaatcacatactaatcatttatgtattatcctggttagtgaaaatggacctacatcttgtcttttaattgaattaattaaatattgattaaaa |
34095173 |
T |
|
| Q |
301 |
agcaatcctattaagctctaannnnnnnnnnnnnnnnnactgtgataatacacgtgtggcgacattgcattggattaccagtctgtatctatcagcaagc |
400 |
Q |
| |
|
||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34095174 |
agcaatcctattaagctctaatctctctttctctctctattgtgataatacacgtgtggcgacattgcattggattaccagtctgtatctatcagcaagc |
34095273 |
T |
|
| Q |
401 |
agaaatgagtcaccccatgatgtatacatgtgtctcctttacactttcaagtgtatatagttggaaatttttgaataaatctaaacttaaaactgtttca |
500 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34095274 |
agaaatgagtcaccccatgatgtatacatgtgtctcctttacactttcaagtgtatatagttggaaatttttgaataaatctaaacttaaaactgtttca |
34095373 |
T |
|
| Q |
501 |
gctttggatagcatataaaatattcagtgttacgtgggagaggacaaatatattcctcaagaggtgggatg |
571 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34095374 |
gctttggatagcatataaaatattcagtgttacgtgggagaggacaaatatattcctcaagaggtgggatg |
34095444 |
T |
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