View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16521_low_72 (Length: 260)
Name: NF16521_low_72
Description: NF16521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16521_low_72 |
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Alignment Details
Target: chr2 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 40050942 - 40051192
Alignment:
| Q |
1 |
tatctgttggggctgatgatggtgatggtgctggtgattcagatgctgaatttatggtggtgggatagaagaggactattaggagaagtgagagtgtgaa |
100 |
Q |
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| T |
40050942 |
tatctgttggggctgatgatggtgatggtgctggtgattcagatgctgaatttatggtggtgggatagaagaggactattaggagaagtgagagtgtgaa |
40051041 |
T |
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| Q |
101 |
gagaggatagttcatc---------ttgagtttgttgaaaggggagaagagaatggagaagtggaccttgaagtgggaatgagggagtgagtgatcaaat |
191 |
Q |
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| T |
40051042 |
gagaggatagttcatctttaccatcttgagtttgttgaaaggggagaagagaatggagaagtggaccttgaagtgggaatgagggagtgagtgatcaaat |
40051141 |
T |
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| Q |
192 |
ttattgaggattcaaaggggttatcttaaaattaggtggaatgtttaatta |
242 |
Q |
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| T |
40051142 |
ttattgaggattcaaaggggttatcttaaaattaggtggaatgtttaatta |
40051192 |
T |
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