View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16521_low_73 (Length: 252)
Name: NF16521_low_73
Description: NF16521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16521_low_73 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 19 - 252
Target Start/End: Complemental strand, 32534906 - 32534673
Alignment:
| Q |
19 |
agtgaaaacttcgtactgataacatgataaccaaaaagaaaattgaatctgaaatagtatgagacaaacaaatattcaaaaatttgcacttaatagaaca |
118 |
Q |
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| T |
32534906 |
agtgaaaactttgtactgataacatgataaccaaaaagaaaattgaatctgaaatagtatgagacaaacaaatattcaaaaatttgcacttaatagaaca |
32534807 |
T |
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| Q |
119 |
tacacaaagttagaactatggtttctggtatttgtgatgattgaagagaaagtcagcactatggtttgtagacttgtagtattagtgagtattgaaggaa |
218 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
32534806 |
tacacaaagttagaactatggtttctggtatttgtgatgattgaagagaaagtcagcactatggtttgtagacttgtagtattggtgagtattgaaggaa |
32534707 |
T |
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| Q |
219 |
aactgaatagcatcccagaaatttactgatatga |
252 |
Q |
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||||||||||||||||||||||||| |||||||| |
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| T |
32534706 |
aactgaatagcatcccagaaatttagtgatatga |
32534673 |
T |
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