View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16521_low_84 (Length: 229)
Name: NF16521_low_84
Description: NF16521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16521_low_84 |
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Alignment Details
Target: chr7 (Bit Score: 175; Significance: 2e-94; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 8 - 211
Target Start/End: Original strand, 36013589 - 36013792
Alignment:
| Q |
8 |
ccgttaacaccgctctctttctcacctctggtaattatacttccttctctcnnnnnnnccagtttttatgttagaagccgattcaatgctacaactactt |
107 |
Q |
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| T |
36013589 |
ccgttaacaccgctctctttctcacctctggtaattatacttcctcctctctttttttccagtttttatgttagaagccgattcaatgctacaactactt |
36013688 |
T |
|
| Q |
108 |
atcttaataagtggatcttacaataacttagaataagagaccaagagagtatataacttaacatatgccacaaccacaacaatagatgcttacatgccac |
207 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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|
| T |
36013689 |
atcttaataagtggatcttacaataacttagaataagagaccaagagagtatataacttaacatatgccacaaccacaacaatagatgcgtacatgccac |
36013788 |
T |
|
| Q |
208 |
aata |
211 |
Q |
| |
|
|||| |
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|
| T |
36013789 |
aata |
36013792 |
T |
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