View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16521_low_93 (Length: 213)
Name: NF16521_low_93
Description: NF16521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16521_low_93 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 42020889 - 42021093
Alignment:
| Q |
1 |
tagagtatctgatttatattgttcaagaccttcagattcaatcattccaaaactcaataacctttcaattcaaaattcagttacttgcatatacaaactc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42020889 |
tagagtatctgatttatattgttcaagaccttcaaattcaatcattccaaaactcaataacctttcaattcaaaattcagttacttgcatatacaaactc |
42020988 |
T |
|
| Q |
101 |
aactttatctcaattcaacaacaatttctcatcacactaacttggaccaagaaactcattggacaaggtttcatcataaacatcacttctgattctgatg |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42020989 |
aactttatctcaattcaacaacaatttctcatcacactaacttggaccaagaaactcattggacaaggtttcatcataaacatcacttctgattctgatt |
42021088 |
T |
|
| Q |
201 |
atgtc |
205 |
Q |
| |
|
||||| |
|
|
| T |
42021089 |
atgtc |
42021093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University