View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16523_high_9 (Length: 294)
Name: NF16523_high_9
Description: NF16523
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16523_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 17 - 283
Target Start/End: Complemental strand, 27018648 - 27018362
Alignment:
| Q |
17 |
agattcaacaataattaattgcaatgtcattaatatacataaggtcagagtgaaatgcacacttacaaactgaccatgcatatatcaatgacatgctaat |
116 |
Q |
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| T |
27018648 |
agatttaacaataattaattgcaatgtcattaatatacataaggtcagagtgaaatgcacacttacaaactgaccatgcatataccaatgacatgctaat |
27018549 |
T |
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| Q |
117 |
tttctataattaatgtatcaaaacatcatttcaaacatcttgattccaatggcc--------------------ttcttgtagaaatcaaagtcctatga |
196 |
Q |
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| T |
27018548 |
ttactataattaatgtatcaaaacatcatttcaaacatcttgattccaatggccactaaccgtgttcattgttgttcttatagaaatcaaagtcctaaga |
27018449 |
T |
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| Q |
197 |
agtaaaaacatccggataaagtatatgtaccgtcattataatcttagagggtacattacatcgaacaatacaaaatgaataattaga |
283 |
Q |
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|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
27018448 |
agtaaaaacatccggataaagtatatgtactgtcattataatcttagagggtacattacatcgaacaatacaaaatgaaaaattaga |
27018362 |
T |
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