View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16524_high_27 (Length: 285)
Name: NF16524_high_27
Description: NF16524
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16524_high_27 |
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Alignment Details
Target: chr1 (Bit Score: 216; Significance: 1e-118; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 10 - 229
Target Start/End: Original strand, 43663219 - 43663438
Alignment:
| Q |
10 |
acatcatcatcactacattatcttctgagcatccaaaatgtaccaaatatcacataaataaagaaagggctgagtcctgctagaacaggatttctataca |
109 |
Q |
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| T |
43663219 |
acatcatcatcactacgttatcttctgagcatccaaaatgtaccaaatatcacataaataaagaaagggctgagtcctgctagaacaggatttctataca |
43663318 |
T |
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| Q |
110 |
gcctctcatcaaactttacaattaaaaatgactggttattacttagtcattcatgcaagccataaaatggcaattctagagcattttgttggaatctaaa |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43663319 |
gcctctcatcaaactttacaattaaaaatgactggttattacttagtcattcatgcaagccataaaatggcaattctagagcattttgttggaatctaaa |
43663418 |
T |
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| Q |
210 |
agccttctacacaacggctt |
229 |
Q |
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|||||||||||||||||||| |
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| T |
43663419 |
agccttctacacaacggctt |
43663438 |
T |
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