View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16524_high_37 (Length: 235)
Name: NF16524_high_37
Description: NF16524
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16524_high_37 |
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Alignment Details
Target: chr7 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 28267725 - 28267954
Alignment:
| Q |
1 |
cggtggtttgagttttttcagtgccatagcacttctactaattgatgaagtccatctgctgaatgatccacgtggagctgtgctggaagcaattgttagc |
100 |
Q |
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| T |
28267725 |
cggtggtttgagttttttcagtgacatagcacttctactaattgatgaagtccatctgctgaatgatccacgtggagctgcgctggaagcaattgttagc |
28267824 |
T |
|
| Q |
101 |
agaataaaaattatttcttgcaatccaaaaatgaaattaaatcctctggctcaggtccgcttccttgctttatcagcaacaattccacatcttgaggatc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||| |
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| T |
28267825 |
agaataaaaattatttcttgcaatccaaaaatgaaattaaatcctctggctcaggtccgcttcctcgctttatcagcaacaattccaaatattgaggatc |
28267924 |
T |
|
| Q |
201 |
tcggtattttctttttcacttgatgatgtc |
230 |
Q |
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| ||||||||||||||||||||||| |||| |
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| T |
28267925 |
taggtattttctttttcacttgatgttgtc |
28267954 |
T |
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