View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16524_high_43 (Length: 204)
Name: NF16524_high_43
Description: NF16524
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16524_high_43 |
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Alignment Details
Target: chr2 (Bit Score: 181; Significance: 5e-98; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 181; E-Value: 5e-98
Query Start/End: Original strand, 7 - 187
Target Start/End: Complemental strand, 42925109 - 42924929
Alignment:
| Q |
7 |
gagaagcaaaggctcataaaggatgatgttagaatcaaatcaaaatgattgaaagaaacggtgtttgaagggaattggaaacttgaaagaaaagcaatgc |
106 |
Q |
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| T |
42925109 |
gagaagcaaaggctcataaaggatgatgttagaatcaaatcaaaatgattgaaagaaacggtgtttgaagggaattggaaacttgaaagaaaagcaatgc |
42925010 |
T |
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| Q |
107 |
agaagcaaaatcaagactgaatcatacaacaaataagaaatgcagaaaatgatcattcaagaaactaaccaatcacagtag |
187 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42925009 |
agaagcaaaatcaagactgaatcatacaacaaataagaaatgcagaaaatgatcattcaagaaactaaccaatcacagtag |
42924929 |
T |
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