View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16525_high_5 (Length: 262)
Name: NF16525_high_5
Description: NF16525
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16525_high_5 |
 | |
|
| [»] scaffold0061 (1 HSPs) |
| | |
|
| [»] scaffold0017 (1 HSPs) |
| | |
|
| [»] scaffold0015 (1 HSPs) |
| | |
|
| [»] scaffold0060 (1 HSPs) |
| | |
|
| [»] scaffold0070 (2 HSPs) |
| | |
|
| [»] scaffold0108 (1 HSPs) |
| | |
|
| [»] scaffold0690 (1 HSPs) |
| | |
|
Alignment Details
Target: chr1 (Bit Score: 206; Significance: 1e-113; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 47455354 - 47455107
Alignment:
| Q |
1 |
cattagtcacatcctgttggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatact |
100 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47455354 |
cattagtcacatcctattggatgtgtttatgactttttttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatact |
47455255 |
T |
|
| Q |
101 |
ttaaccgttccttttagagctctctaattattctgtgttcgtgccttaattatcgtttctcaccattgtggtaacg---ctcaaatttgtaatagttgca |
197 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||| ||||||||| |
|
|
| T |
47455254 |
ttaaccgttccttttagagctctctaattattctgtgttcgtgccttaattatcgtttctcaccattgtggtaatgattctcaattttgttatagttgca |
47455155 |
T |
|
| Q |
198 |
gactatcacaataaattaacatttcggacaacggtttcacccactaag |
245 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
47455154 |
tactatcacaataaattaacacttcggacaacggtttcacccactaag |
47455107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 10137000 - 10137244
Alignment:
| Q |
1 |
cattagtcacatcctgttggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatact |
100 |
Q |
| |
|
|||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
10137000 |
cattagtcccatcctattggatgtgtttaggactttctttctagtaattcctttcgtcaaaggattgactaattctttatcagtacgtgcacgatatact |
10137099 |
T |
|
| Q |
101 |
ttaaccgttccttttagagctctctaattattctgtgttcgtgccttaattatcgtttctcaccattgtggtaacg---ctcaaatttgtaatagttgca |
197 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||| |||| |
|
|
| T |
10137100 |
ttaaccgttccttttagagctctctaatcattctgtgttcgtgccttaattatcgtctctcaccattgtggtaacgattctcaattttgtaatagctgca |
10137199 |
T |
|
| Q |
198 |
gactatcacaataaattaacatttcggacaacggtttcacccact |
242 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
10137200 |
gactatcacaataaattaacacttcggacaacggtttcacccact |
10137244 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 25845431 - 25845679
Alignment:
| Q |
1 |
cattagtcacatcctgttggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatact |
100 |
Q |
| |
|
|||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||| |
|
|
| T |
25845431 |
cattagtctcatcctattggatgtgtttaagactttctttctagtaattcctttcgtcaaaggattgactaattctttattaatacgtgcacgatatact |
25845530 |
T |
|
| Q |
101 |
ttaaccgttccttttagagctctctaattattctgtgttcgtgccttaattatcgtttctcaccattgtggtaacg---ctcaaat-ttgtaatagttgc |
196 |
Q |
| |
|
|||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||| ||||| | ||||||||| ||| |
|
|
| T |
25845531 |
ttaatcgttccttttagagctctctaatcattatgtgttcgtgccttaattatcgtttctcaccattatggtaacgattctcaattattgtaatagctgc |
25845630 |
T |
|
| Q |
197 |
agactatcacaataaattaacatttcggacaacggtttcacccactaag |
245 |
Q |
| |
|
|||||||||||||||||||||| ||| |||||||||||||||||||||| |
|
|
| T |
25845631 |
agactatcacaataaattaacacttcagacaacggtttcacccactaag |
25845679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 11810584 - 11810696
Alignment:
| Q |
1 |
cattagtcacatcctgttggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatact |
100 |
Q |
| |
|
|||||| | |||||| ||||||||||||| ||||||||| ||| |||| |||||||||||||| | |||||||| |||||||||| || ||| || | |
|
|
| T |
11810584 |
cattagccccatcctattggatgtgtttaggactttctt---agttattcatttcgtcaaaggatcaactaattcttcatcagtacgtacatgatctatt |
11810680 |
T |
|
| Q |
101 |
ttaaccgttcctttta |
116 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
11810681 |
ttaaccgttcctttta |
11810696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 195; Significance: 1e-106; HSPs: 8)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 4241426 - 4241182
Alignment:
| Q |
1 |
cattagtcacatcctgttggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatact |
100 |
Q |
| |
|
|||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |
|
|
| T |
4241426 |
cattagtcccatcctgttggatgtgtttaggactttctttctagtaattcctttcgtcaaaggattgactaattctttatcaatacgtgcacgatatact |
4241327 |
T |
|
| Q |
101 |
ttaaccgttccttttagagctctctaattattctgtgttcgtgccttaattatcgtttctcaccattgtggtaacg---ctcaaatttgtaatagttgca |
197 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||| |||| |
|
|
| T |
4241326 |
ttaaccgttccttttagagctctctaatcattctgtgttcgtgccttaattatcgtctctcaccattgtggtaacgattctcaattttgtaatagctgca |
4241227 |
T |
|
| Q |
198 |
gactatcacaataaattaacatttcggacaacggtttcacccact |
242 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
4241226 |
gactatcacaataaattaacacttcggacaacggtttcacccact |
4241182 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 17552372 - 17552539
Alignment:
| Q |
1 |
cattagtcacatcctgttggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatact |
100 |
Q |
| |
|
|||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||| |
|
|
| T |
17552372 |
cattagtcccatcctgttggatgtgtttaggactttctttctagtaattcctttcgtcaaaggattgactaattctttatcagtacttgtacgatatact |
17552471 |
T |
|
| Q |
101 |
ttaaccgttccttttagagctctctaattattctgtgttcgtgccttaattatcgtttctcaccattg |
168 |
Q |
| |
|
|||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||| ||||||||||| |
|
|
| T |
17552472 |
ttaaccgttccttttagatctctctaatcattttgtgttcgtgccttaattatcgtctctcaccattg |
17552539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 17021935 - 17022102
Alignment:
| Q |
1 |
cattagtcacatcctgttggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatact |
100 |
Q |
| |
|
|||||||| |||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
17021935 |
cattagtctcatcctattggatgtgtttatgactttctttctagcaattcttttcgtcaaaggattgactaattctttatcagtacatgcacgatatact |
17022034 |
T |
|
| Q |
101 |
ttaaccgttccttttagagctctctaattattctgtgttcgtgccttaattatcgtttctcaccattg |
168 |
Q |
| |
|
|||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||| ||||||||||| |
|
|
| T |
17022035 |
ttaaccgttccttttagaactctctaatcattttgtgttcgtgccttaattatcgtctctcaccattg |
17022102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 42 - 245
Target Start/End: Original strand, 28861325 - 28861533
Alignment:
| Q |
42 |
tagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatata--ctttaaccgttccttttagagctctctaattattctgtgtt |
139 |
Q |
| |
|
|||| ||||||||||||||||||| | |||||||| |||||||||||||||||||| |||||||||||||||| |||||||| |||||||| |||||| |
|
|
| T |
28861325 |
tagttattcctttcgtcaaaggatcaagtaattcttcatcagtacgtgcacgatatatactttaaccgttccttt-agagctctgtaattattttgtgtt |
28861423 |
T |
|
| Q |
140 |
cgtgccttaattatcgtttctcaccattgtggtaac---gctcaaatttgtaatagttgcag-actatcacaataaattaacatttcggacaacggtttc |
235 |
Q |
| |
|
|||||||||||| || | ||| |||||||||||||| ||||| |||||||||||||||| | | ||||||| | |||||| ||| |||||||||| |
|
|
| T |
28861424 |
cgtgccttaattgtcatctcttaccattgtggtaacaattctcaattttgtaatagttgcagtattgtcacaatgatttaacacttcttgcaacggtttc |
28861523 |
T |
|
| Q |
236 |
acccactaag |
245 |
Q |
| |
|
| |||||||| |
|
|
| T |
28861524 |
atccactaag |
28861533 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 21960133 - 21960248
Alignment:
| Q |
1 |
cattagtcacatcctgttggatgtgttt-atgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatac |
99 |
Q |
| |
|
|||||||| |||||| || ||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||| |
|
|
| T |
21960133 |
cattagtctcatcctattcgatgtgttttaggactttctttctagtaattcctttcgtcaaaggattgactaattctttatcagtacgtacatgatatac |
21960232 |
T |
|
| Q |
100 |
tttaaccgttcctttt |
115 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
21960233 |
tttaaccgttcctttt |
21960248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 8329723 - 8329608
Alignment:
| Q |
1 |
cattagtcacatcctgttggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattcttt-atcagtacgtgcacgatatac |
99 |
Q |
| |
|
|||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||| | ||||||||| |||||||||| || ||||||| |
|
|
| T |
8329723 |
cattagtcccatcctattggatgtgtttaggactttctttctagtaattcctttcgtcaaatgatttactaattctttcatcagtacgtacatgatatac |
8329624 |
T |
|
| Q |
100 |
tttaaccgttcctttt |
115 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
8329623 |
tttaaccgttcctttt |
8329608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 17022104 - 17022156
Alignment:
| Q |
193 |
ttgcagactatcacaataaattaacatttcggacaacggtttcacccactaag |
245 |
Q |
| |
|
||||||| |||||||| ||||||||| || ||||||||||||||||||||||| |
|
|
| T |
17022104 |
ttgcagattatcacaacaaattaacacttaggacaacggtttcacccactaag |
17022156 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 17552541 - 17552593
Alignment:
| Q |
193 |
ttgcagactatcacaataaattaacatttcggacaacggtttcacccactaag |
245 |
Q |
| |
|
||||||| |||||||| ||||||||| || ||||||||||||||||||||||| |
|
|
| T |
17552541 |
ttgcagattatcacaacaaattaacacttaggacaacggtttcacccactaag |
17552593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 195; Significance: 1e-106; HSPs: 7)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 26668952 - 26669196
Alignment:
| Q |
1 |
cattagtcacatcctgttggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatact |
100 |
Q |
| |
|
|||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
26668952 |
cattagtctcatcctattggatgtgtttaagactttctttctagtaattcctttcgtcaaaggattgactaattctttatcagtacgtgcacgatatact |
26669051 |
T |
|
| Q |
101 |
ttaaccgttccttttagagctctctaattattctgtgttcgtgccttaattatcgtttctcaccattgtggtaacg---ctcaaatttgtaatagttgca |
197 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||| |||| |
|
|
| T |
26669052 |
ttaaccgttccttttagagctctctaatcattctgtgttcgtgccttaattatcgtctctcaccattgtggtaacgattctcaattttgtaatagctgca |
26669151 |
T |
|
| Q |
198 |
gactatcacaataaattaacatttcggacaacggtttcacccact |
242 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
26669152 |
gactatcacaataaattaacacttcggacaacggtttcacccact |
26669196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 26940549 - 26940793
Alignment:
| Q |
1 |
cattagtcacatcctgttggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatact |
100 |
Q |
| |
|
|||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
26940549 |
cattagtctcatcctattggatgtgtttaagactttctttctagtaattcctttcgtcaaaggattgactaattctttatcagtacgtgcacgatatact |
26940648 |
T |
|
| Q |
101 |
ttaaccgttccttttagagctctctaattattctgtgttcgtgccttaattatcgtttctcaccattgtggtaacg---ctcaaatttgtaatagttgca |
197 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||| |||| |
|
|
| T |
26940649 |
ttaaccgttccttttagagctctctaatcattctgtgttcgtgccttaattatcgtctctcaccattgtggtaacgattctcaattttgtaatagctgca |
26940748 |
T |
|
| Q |
198 |
gactatcacaataaattaacatttcggacaacggtttcacccact |
242 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
26940749 |
gactatcacaataaattaacacttcggacaacggtttcacccact |
26940793 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 558444 - 558688
Alignment:
| Q |
1 |
cattagtcacatcctgttggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatact |
100 |
Q |
| |
|
|||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
558444 |
cattagtcccatcctgttggatgtgtttaggactttctttctagcaattcctttcgtcaaaggattggctaattctttatcagtacgtgcacgatatact |
558543 |
T |
|
| Q |
101 |
ttaaccgttccttttagagctctctaattattctgtgttcgtgccttaattatcgtttctcaccattgtggtaacg---ctcaaatttgtaatagttgca |
197 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||||||| ||||| |||||||||| |||| |
|
|
| T |
558544 |
ttaaccgttccttttagagctctctaatcattctgtgtttgtgccttaattatcgtctctcaccattgtggtaacgattctcaattttgtaatagctgca |
558643 |
T |
|
| Q |
198 |
gactatcacaataaattaacatttcggacaacggtttcacccact |
242 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
558644 |
gactatcacaataaattaacacttcggacaacggtttcacccact |
558688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 36940610 - 36940366
Alignment:
| Q |
1 |
cattagtcacatcctgttggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatact |
100 |
Q |
| |
|
|||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |
|
|
| T |
36940610 |
cattagtcccatcctgttggatgggtttaggactttctttctagtaattcctttcgtcaaaggattgactaattctttatcaatacgtgcacgatatact |
36940511 |
T |
|
| Q |
101 |
ttaaccgttccttttagagctctctaattattctgtgttcgtgccttaattatcgtttctcaccattgtggtaacg---ctcaaatttgtaatagttgca |
197 |
Q |
| |
|
||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||| |||| |
|
|
| T |
36940510 |
ttaaccgtttcttttagagctctctaatcattctgtgttcgtgccttaattatcgtctctcaccattgtggtaacgattctcaattttgtaatagctgca |
36940411 |
T |
|
| Q |
198 |
gactatcacaataaattaacatttcggacaacggtttcacccact |
242 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
36940410 |
gactatcacaataaattaacacttcggacaacggtttcacccact |
36940366 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 41998390 - 41998634
Alignment:
| Q |
1 |
cattagtcacatcctgttggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatact |
100 |
Q |
| |
|
|||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
41998390 |
cattagtcccatcttgttggatgtgtttaggactttctttctagtaattcctttcgtcaaaggattgactaattctttatcagtacgtgtacgatatact |
41998489 |
T |
|
| Q |
101 |
ttaaccgttccttttagagctctctaattattctgtgttcgtgccttaattatcgtttctcaccattgtggtaacg---ctcaaatttgtaatagttgca |
197 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||| ||||| |||||||||| |||| |
|
|
| T |
41998490 |
ttaaccgttccttttagagctctctaatcattctgtgttcgtgccttaattaccgtctctcaccattgtggtaacgattctcaattttgtaatagctgca |
41998589 |
T |
|
| Q |
198 |
gactatcacaataaattaacatttcggacaacggtttcacccact |
242 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
41998590 |
gactatcacaataaattaacacttcggacaacggtttcacccact |
41998634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 12 - 242
Target Start/End: Original strand, 36425326 - 36425559
Alignment:
| Q |
12 |
tcctgttggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatactttaaccgttcc |
111 |
Q |
| |
|
|||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
36425326 |
tcctattggatgtgtttaggactttttttctagtaattcctttcgtcaaaggattgactaattctttatttgtacgtgcacgatatactttaaccgttcc |
36425425 |
T |
|
| Q |
112 |
ttttagagctctctaattattctgtgttcgtgccttaattatcgtttctcaccattgtggtaacg---ctcaaatttgtaatagttgcagactatcacaa |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||| |||| |||||||||| |
|
|
| T |
36425426 |
ttttagagctctctaattattctgtgttcgtgccttaattatcgtttctcaccattgtggtaatgattctcaattttgtaatagatgcaaactatcacaa |
36425525 |
T |
|
| Q |
209 |
taaattaacatttcggacaacggtttcacccact |
242 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| |
|
|
| T |
36425526 |
taaattaacacttcggacaacggtttcacccact |
36425559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 39520060 - 39520304
Alignment:
| Q |
1 |
cattagtcacatcctgttggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatact |
100 |
Q |
| |
|
|||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||| | |||||||||||||||||| |
|
|
| T |
39520060 |
cattagtctcatcctattggatgtgtttaggactttctttctagtaattcctttcgtcaaaggattgactgattctttcttcgtacgtgcacgatatact |
39520159 |
T |
|
| Q |
101 |
ttaaccgttccttttagagctctctaattattctgtgttcgtgccttaattatcgtttctcaccattgtggtaacg---ctcaaatttgtaatagttgca |
197 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||| |||||| |||| |
|
|
| T |
39520160 |
ttaaccgttccttttagagctctctaatcattctgtgttcgtgccttaattatcgtctctcaccattgtggtaacgattctcaattttataatagctgca |
39520259 |
T |
|
| Q |
198 |
gactatcacaataaattaacatttcggacaacggtttcacccact |
242 |
Q |
| |
|
||||||||||| |||| |||| ||||||||||||||||||||||| |
|
|
| T |
39520260 |
gactatcacaaaaaatcaacacttcggacaacggtttcacccact |
39520304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 195; Significance: 1e-106; HSPs: 8)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 9183838 - 9183594
Alignment:
| Q |
1 |
cattagtcacatcctgttggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatact |
100 |
Q |
| |
|
|||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
9183838 |
cattagtcccatcctcttggatgtgtttaggactttctttctagtaattcctttcgtcaaaggattgactaattctttatcagtacgtgcacgatatact |
9183739 |
T |
|
| Q |
101 |
ttaaccgttccttttagagctctctaattattctgtgttcgtgccttaattatcgtttctcaccattgtggtaacg---ctcaaatttgtaatagttgca |
197 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||| |||| |
|
|
| T |
9183738 |
ttaaccgttccttttagagctctctaatcattctgtgttcgtgccttaattatcgtctctcaccattgtggtaacgaatctcaattttgtaatagctgca |
9183639 |
T |
|
| Q |
198 |
gactatcacaataaattaacatttcggacaacggtttcacccact |
242 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
9183638 |
gactatcacaataaattaacacttcggacaacggtttcacccact |
9183594 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 17973771 - 17973527
Alignment:
| Q |
1 |
cattagtcacatcctgttggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatact |
100 |
Q |
| |
|
|||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
17973771 |
cattagtcccatcctattggatgtgtttaggactttctttctagtaattcctttcgtcaaaggattgactaattctttatcagtacgtgcacgatatact |
17973672 |
T |
|
| Q |
101 |
ttaaccgttccttttagagctctctaattattctgtgttcgtgccttaattatcgtttctcaccattgtggtaacg---ctcaaatttgtaatagttgca |
197 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||| |||| |
|
|
| T |
17973671 |
ttaaccgttccttttagagctctctaatcattctgtgttcgtgccttaattatcgtctctcaccattgtggtaacgattctcaattttgtaatagctgca |
17973572 |
T |
|
| Q |
198 |
gactatcacaataaattaacatttcggacaacggtttcacccact |
242 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
17973571 |
gactatcacaataaattaacacttcggacaacggtttcacccact |
17973527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 30652589 - 30652833
Alignment:
| Q |
1 |
cattagtcacatcctgttggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatact |
100 |
Q |
| |
|
|||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
30652589 |
cattagtcccatcctattggatgtgtttaggactttctttctagtaattcctttcgtcaaaggattgactaattctttatcagtacgtgcacgatatact |
30652688 |
T |
|
| Q |
101 |
ttaaccgttccttttagagctctctaattattctgtgttcgtgccttaattatcgtttctcaccattgtggtaacg---ctcaaatttgtaatagttgca |
197 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||| |||| |
|
|
| T |
30652689 |
ttaaccgttccttttagagctctctaatcattctgtgttcgtgccttaattatcgtctctcaccattgtggtaacgattctcaattttgtaatagctgca |
30652788 |
T |
|
| Q |
198 |
gactatcacaataaattaacatttcggacaacggtttcacccact |
242 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
30652789 |
gactatcacaataaattaacacttcggacaacggtttcacccact |
30652833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 25483190 - 25482970
Alignment:
| Q |
1 |
cattagtcacatcctgttggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatact |
100 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
25483190 |
cattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgactaattctttatcagtacgtgcacgatatact |
25483091 |
T |
|
| Q |
101 |
ttaaccgttccttttagagctctctaattattctgtgttcgtgccttaattatcgtttctcaccattgtggtaacg---ctcaaatttgtaatagttgca |
197 |
Q |
| |
|
|||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||| | ||||| |||||||||| |||| |
|
|
| T |
25483090 |
ttaaccgttccttttagagctctctaatcattttgtgttcgtgccttaattatcgtctctcaccattgtggtaatgattctcaattttgtaatagctgca |
25482991 |
T |
|
| Q |
198 |
gactatcacaataaattaaca |
218 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
25482990 |
gactatcacaataaattaaca |
25482970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 25490796 - 25490576
Alignment:
| Q |
1 |
cattagtcacatcctgttggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatact |
100 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
25490796 |
cattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgactaattctttatcagtacgtgcacgatatact |
25490697 |
T |
|
| Q |
101 |
ttaaccgttccttttagagctctctaattattctgtgttcgtgccttaattatcgtttctcaccattgtggtaacg---ctcaaatttgtaatagttgca |
197 |
Q |
| |
|
|||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||| | ||||| |||||||||| |||| |
|
|
| T |
25490696 |
ttaaccgttccttttagagctctctaatcattttgtgttcgtgccttaattatcgtctctcaccattgtggtaatgattctcaattttgtaatagctgca |
25490597 |
T |
|
| Q |
198 |
gactatcacaataaattaaca |
218 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
25490596 |
gactatcacaataaattaaca |
25490576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 30647873 - 30647988
Alignment:
| Q |
1 |
cattagtcacatcctgttggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattcttt-atcagtacgtgcacgatatac |
99 |
Q |
| |
|
||||||| |||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||| | || ||||||| |
|
|
| T |
30647873 |
cattagtgccatcctattggatgtgtatatgacttcctttctagtaattcctttcgtcaaaggattgacgaattctttcatcagtacatacatgatatac |
30647972 |
T |
|
| Q |
100 |
tttaaccgttcctttt |
115 |
Q |
| |
|
||||||||||| |||| |
|
|
| T |
30647973 |
tttaaccgttcatttt |
30647988 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 115
Target Start/End: Complemental strand, 24536422 - 24536327
Alignment:
| Q |
17 |
ttggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatactttaaccgttcctttt |
115 |
Q |
| |
|
||||||||||||| ||||||||| ||| |||||||| |||||||||| | |||||||| |||||||||| || ||| ||||||||||||||||||| |
|
|
| T |
24536422 |
ttggatgtgtttaggactttctt---agttattccttttgtcaaaggatcaactaattcttcatcagtacgtacatgatctactttaaccgttcctttt |
24536327 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 3175267 - 3175224
Alignment:
| Q |
1 |
cattagtcacatcctgttggatgtgtttatgactttctttctag |
44 |
Q |
| |
|
|||||||| |||||| ||| |||||||||||||||||||||||| |
|
|
| T |
3175267 |
cattagtcccatcctattgaatgtgtttatgactttctttctag |
3175224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 191; Significance: 1e-104; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 8884918 - 8885162
Alignment:
| Q |
1 |
cattagtcacatcctgttggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatact |
100 |
Q |
| |
|
|||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
8884918 |
cattagtcccatcctattggatgtgtttaggactttctttctagtaattcctttcgtcaaaggattgactaattctttatcagtacgtgcacgatatact |
8885017 |
T |
|
| Q |
101 |
ttaaccgttccttttagagctctctaattattctgtgttcgtgccttaattatcgtttctcaccattgtggtaacg---ctcaaatttgtaatagttgca |
197 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||| |||| |
|
|
| T |
8885018 |
ttaaccgttccttttagagctctctaatcattctgtgttcgtgccttaattatcgtctctcaccattgtggtaacgattctcaattttgtaatagctgca |
8885117 |
T |
|
| Q |
198 |
gactatcacaataaattaacatttcggacaacggtttcacccact |
242 |
Q |
| |
|
|||||||||| |||||||||| ||||||||||||||||||||||| |
|
|
| T |
8885118 |
gactatcacagtaaattaacacttcggacaacggtttcacccact |
8885162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 3674314 - 3674555
Alignment:
| Q |
1 |
cattagtcacatcctgttggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattcttt-atcagtacgtgcacgatatac |
99 |
Q |
| |
|
|||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||| |
|
|
| T |
3674314 |
cattagtcccatcctgttggatgtgtttaggactttctttctagtaattcctttcgtcaaaggattgactaattcttttatcaatacgtgcacgatatac |
3674413 |
T |
|
| Q |
100 |
tttaaccgttccttttagagctctctaattattctgtgttcgtgccttaattatcgtttctcaccattgtggtaacg---ctcaaatttgtaatagttgc |
196 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
3674414 |
tttaaccgttccttttagagctctctaatcattctgtgttcgtgccttaattatcgtctctcaccattgtggtaacgattctcaattttgtaatagttgc |
3674513 |
T |
|
| Q |
197 |
agactatcacaataaattaacatttcggacaacggtttcacc |
238 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
3674514 |
agactatcacaataaattaacacttcggacaacggtttcacc |
3674555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 18468887 - 18469131
Alignment:
| Q |
1 |
cattagtcacatcctgttggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatact |
100 |
Q |
| |
|
|||||||| |||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
18468887 |
cattagtcccatcctattggatgtgtttaggactttctttctagtaattcctttcatcaaaggattgattaattctttatcagtacgtgcacaatatact |
18468986 |
T |
|
| Q |
101 |
ttaaccgttccttttagagctctctaattattctgtgttcgtgccttaattatcgtttctcaccattgtggtaacg---ctcaaatttgtaatagttgca |
197 |
Q |
| |
|
||||||||||||||||||||||| |||| |||||||||||||||||||||||| || ||||||||||||||||||| ||||| |||||||||| |||| |
|
|
| T |
18468987 |
ttaaccgttccttttagagctctttaatcattctgtgttcgtgccttaattattgtctctcaccattgtggtaacgattctcaattttgtaatagctgca |
18469086 |
T |
|
| Q |
198 |
gactatcacaataaattaacatttcggacaacggtttcacccact |
242 |
Q |
| |
|
||||||||||||||||||||| || |||||||||||||||||||| |
|
|
| T |
18469087 |
gactatcacaataaattaacactttggacaacggtttcacccact |
18469131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 23664542 - 23664300
Alignment:
| Q |
1 |
cattagtcacatcctgttggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatact |
100 |
Q |
| |
|
|||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||| |
|
|
| T |
23664542 |
cattagtcccatcctattggatgtgtttaggactttctttctagtaattcctttcgtcaaaggattgactaatgctttattagtacgtgcacgatatact |
23664443 |
T |
|
| Q |
101 |
ttaaccgttccttttagagctctctaattattctgtgttcgtgccttaattatcgtttctcaccattgtggtaacg---ctcaaatttgtaatagttgca |
197 |
Q |
| |
|
|||||| ||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||| |||| ||||| |||||||||| |||| |
|
|
| T |
23664442 |
ttaaccattccttttagagctctctaatcattctgtgttcgtgccttaattatcatctctcaccattgtggcaacgattctcaattttgtaatagctgca |
23664343 |
T |
|
| Q |
198 |
gactatcacaataaattaacatttcggacaacggtttcaccca |
240 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||||||||||||| |
|
|
| T |
23664342 |
gactatcacaaaaaattaacacttcggacaacggtttcaccca |
23664300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 12970230 - 12970116
Alignment:
| Q |
1 |
cattagtcacatcctgttggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatact |
100 |
Q |
| |
|
|||||||| |||||| |||||| |||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| || | | | || |
|
|
| T |
12970230 |
cattagtcccatcctattggatatgtttagtactttctttccagtaattcctttcgtcaaaggattgactaattctttatcagtacgtacatgctctgct |
12970131 |
T |
|
| Q |
101 |
ttaaccgttcctttt |
115 |
Q |
| |
|
|||||| |||||||| |
|
|
| T |
12970130 |
ttaaccattcctttt |
12970116 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 186; Significance: 1e-101; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 16834582 - 16834335
Alignment:
| Q |
1 |
cattagtcacatcctgttggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatact |
100 |
Q |
| |
|
|||||||| |||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
16834582 |
cattagtcccatcctattggatgtgtttaggactttctttctagcaattcctttcgtcaaaggattgactaattctttatcagtacgtgcacgatatact |
16834483 |
T |
|
| Q |
101 |
ttaaccgttccttttagagctctctaattattctgtgttcgtgccttaattatcgtttctcaccattgtggtaacg---ctcaaatttgtaatagttgca |
197 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||| ||||| |||||||||| |||| |
|
|
| T |
16834482 |
ttaaccgttccttttagagctctctaatcattctgtgttcgtgccttaattatcgtctctcatcattgtggtaacgattctcaattttgtaatagctgca |
16834383 |
T |
|
| Q |
198 |
gactatcacaataaattaacatttcggacaacggtttcacccactaag |
245 |
Q |
| |
|
||||||||||| ||||||||| |||||||||||||||||||||||||| |
|
|
| T |
16834382 |
gactatcacaaaaaattaacacttcggacaacggtttcacccactaag |
16834335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 12797191 - 12797037
Alignment:
| Q |
1 |
cattagtcacatcctgttggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatact |
100 |
Q |
| |
|
|||||||| ||||| |||||||||||||| ||||||||| ||||| ||||||||| ||||||||| | ||| ||||||| ||||| || ||||| |||| |
|
|
| T |
12797191 |
cattagtctcatcccgttggatgtgtttaggactttcttactagttattcctttcatcaaaggatcaactaagtctttatgagtacatgtacgatttact |
12797092 |
T |
|
| Q |
101 |
ttaaccgttccttttagagctctctaattattc--tgtgttcgtgccttaattatc |
154 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||| |
|
|
| T |
12797091 |
ttaaccgttcc-tttagagctctctaattattcagtgtgttcatgccttaattatc |
12797037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 115
Target Start/End: Complemental strand, 19992828 - 19992718
Alignment:
| Q |
2 |
attagtcacatcctgttggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatactt |
101 |
Q |
| |
|
||||||| ||||| ||||||||||||| ||||||||| | | |||||||| |||||||||| |||||||||| |||||||||| | ||| || || |
|
|
| T |
19992828 |
attagtcccatccaattggatgtgtttaggactttctt---aattattccttttgtcaaaggatcaaataattcttcatcagtacgtacttgatctaatt |
19992732 |
T |
|
| Q |
102 |
taaccgttcctttt |
115 |
Q |
| |
|
|| ||||||||||| |
|
|
| T |
19992731 |
tacccgttcctttt |
19992718 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 125 - 176
Target Start/End: Complemental strand, 2861593 - 2861542
Alignment:
| Q |
125 |
taattattctgtgttcgtgccttaattatcgtttctcaccattgtggtaacg |
176 |
Q |
| |
|
||||| |||| ||||||||||||||||||||| ||| |||||||| |||||| |
|
|
| T |
2861593 |
taattgttctttgttcgtgccttaattatcgtctcttaccattgtagtaacg |
2861542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 182; Significance: 2e-98; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 12802956 - 12803203
Alignment:
| Q |
1 |
cattagtcacatcctgttggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatact |
100 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
12802956 |
cattagtcacatcctattggatgtgtttatgactttctttctagtaattcctttcatcaaatgattgactaattctttatcagtacgtgcacgatatact |
12803055 |
T |
|
| Q |
101 |
ttaaccgttccttttagagctctctaattattctgtgttcgtgccttaattatcgtttctcaccattgtggtaac---gctcaaatttgtaatagttgca |
197 |
Q |
| |
|
||||||||||||||||||| |||||||||||| | ||||||||||||||||||||| ||||||||||||| |||| ||||| |||||||||| |||| |
|
|
| T |
12803056 |
ttaaccgttccttttagagatctctaattattttttgttcgtgccttaattatcgtctctcaccattgtgctaacaattctcaattttgtaatagctgca |
12803155 |
T |
|
| Q |
198 |
gactatcacaataaattaacatttcggacaacggtttcacccactaag |
245 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
12803156 |
gactatcacaataaattaacacttcggacaacggtttcacccactaag |
12803203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 2596444 - 2596553
Alignment:
| Q |
4 |
tagtcacatcctgttggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatacttta |
103 |
Q |
| |
|
||||| |||||| |||||||| |||| |||||||||||| ||||||||||| |||||||||||| |||||||| || | | || | ||||||||||| |
|
|
| T |
2596444 |
tagtcccatcctattggatgtttttaagactttctttctgataattcctttcatcaaaggattgactaattcttcattaattagtacgtgatatacttta |
2596543 |
T |
|
| Q |
104 |
accgttcctt |
113 |
Q |
| |
|
|||||||||| |
|
|
| T |
2596544 |
accgttcctt |
2596553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 115
Target Start/End: Complemental strand, 10391511 - 10391404
Alignment:
| Q |
5 |
agtcacatcctgttggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatactttaa |
104 |
Q |
| |
|
|||| |||||| ||||||||||||| |||||||| ||| ||||||||||||||||||| | || ||||| |||||||| | || ||| | |||||| |
|
|
| T |
10391511 |
agtctcatcctattggatgtgtttagaactttctt---agttattcctttcgtcaaaggatcaattagttcttcatcagtacatacatgatcttctttaa |
10391415 |
T |
|
| Q |
105 |
ccgttcctttt |
115 |
Q |
| |
|
| ||||||||| |
|
|
| T |
10391414 |
ctgttcctttt |
10391404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 171; Significance: 6e-92; HSPs: 9)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 37262984 - 37262740
Alignment:
| Q |
1 |
cattagtcacatcctgttggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatact |
100 |
Q |
| |
|
|||||||| ||||| || |||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |
|
|
| T |
37262984 |
cattagtcttatcctattagatgtgtttaggactttctttctagtaattcctttcgtcaaaggatttactaattctttatcagtacgtgcacgatatact |
37262885 |
T |
|
| Q |
101 |
ttaaccgttccttttagagctctctaattattctgtgttcgtgccttaattatcgtttctcaccattgtggtaacg---ctcaaatttgtaatagttgca |
197 |
Q |
| |
|
|||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||| ||||| |||||||||| |||| |
|
|
| T |
37262884 |
ttaatcgttccttttagagctctctaatcattctgtgttcgtgccttaattatcgtctctcaccattgtggcaacgattctcaattttgtaatagctgca |
37262785 |
T |
|
| Q |
198 |
gactatcacaataaattaacatttcggacaacggtttcacccact |
242 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||||||||||||||| |
|
|
| T |
37262784 |
gactatcacaaaaaattaacacttcggacaacggtttcacccact |
37262740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 2 - 245
Target Start/End: Original strand, 13061140 - 13061386
Alignment:
| Q |
2 |
attagtcacatcctgttggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatactt |
101 |
Q |
| |
|
||||||| |||||| ||||||||||||| ||||||||||||| || ||||||||||||||||||||| ||||||||||||||||| |||| ||||||||| |
|
|
| T |
13061140 |
attagtcccatcctattggatgtgttta-gactttctttctattatttcctttcgtcaaaggattgactaattctttatcagtacatgcatgatatactt |
13061238 |
T |
|
| Q |
102 |
taaccgttccttttagagctctctaattattctgtgttcgtgccttaattatcgtttctcaccattgtggtaacg---ctcaa-atttgtaatagttgca |
197 |
Q |
| |
|
|||| |||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||| || ||||| |||||||||| |||| |
|
|
| T |
13061239 |
taactgttccttttagagctctctaattattttgtgttcgtgccttaattaccgtctctcaccattgtggtagcgattctcaatttttgtaatagctgca |
13061338 |
T |
|
| Q |
198 |
gactatcacaataaattaacatttcggacaacggtttcacccactaag |
245 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
13061339 |
gactatcacaataaattaacacttcggacaacggtttcacccactaag |
13061386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 33467482 - 33467235
Alignment:
| Q |
1 |
cattagtcacatcctgttggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatact |
100 |
Q |
| |
|
||||| || |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||| | |||||| |
|
|
| T |
33467482 |
cattaatctcatcctattggatgtgtttaggactttctttctagtaattcctttcgtcaaaggatcaactaattcttcatcagtacgtgcatgttatact |
33467383 |
T |
|
| Q |
101 |
ttaaccgttccttttagagctctctaattattctgtgttcgtgccttaattatcgtttctcaccattgtggtaacg---ctcaaatttgtaatagttgca |
197 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||| ||||| |||||||||| |||| |
|
|
| T |
33467382 |
ttaaccgttccttttagagctctctggttattctgtgtttgtgccttaattatcgtctctcaccattgtggtaacgattctcaattttgtaatagctgca |
33467283 |
T |
|
| Q |
198 |
gactatcacaataaattaacatttcggacaacggtttcacccactaag |
245 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| |||| |||| |||| |
|
|
| T |
33467282 |
gactatcacaataaattaacacttcggacaacgttttcgcccattaag |
33467235 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 12876012 - 12876258
Alignment:
| Q |
1 |
cattagtcacatcctgttggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatact |
100 |
Q |
| |
|
|||||||| ||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||| |||| |
|
|
| T |
12876012 |
cattagtcccatcccgttggatgtgttttggactttctttctagttattcctttcgtcaaaggatcaactaattctttatcagtacgtgcacgatttact |
12876111 |
T |
|
| Q |
101 |
ttaaccgttccttttagagctctctaattattctgtgttcgtgccttaattatcgtttctcaccattgtgg-taacg---ctcaaatttgtaatagttgc |
196 |
Q |
| |
|
||||||||||| |||||||||||||||||||| |||||| |||||||||||| ||| ||| ||| |||||| ||||| ||||| |||||||||| | |
|
|
| T |
12876112 |
ttaaccgttcc-tttagagctctctaattattatgtgtttgtgccttaattaccgtctcttaccgttgtggttaacgattctcaattttgtaatagccgt |
12876210 |
T |
|
| Q |
197 |
ag-actatcacaataaattaacatttcggacaacggtttcacccacta |
243 |
Q |
| |
|
| |||||||||||||||||||||| | |||||||||||||||||| |
|
|
| T |
12876211 |
tgtactatcacaataaattaacattattggcaacggtttcacccacta |
12876258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 19103653 - 19103882
Alignment:
| Q |
4 |
tagtcacatcctgttggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatacttta |
103 |
Q |
| |
|
||||| |||||| || |||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||| || ||| || |||| |
|
|
| T |
19103653 |
tagtcccatcctatttgatgtgtttaggactttctttctagtaatttctttcgtcaaaggattgactaattctgtatcagtacgtacatgatctatttta |
19103752 |
T |
|
| Q |
104 |
accgttcc--ttttag-------agctctctaat-tattctgtgttcgtgccttaattatcgtttctcaccattgtggtaacg---ctcaa-atttgtaa |
189 |
Q |
| |
|
|||||||| |||||| ||||||||||| || ||||||||||||||||||||||| ||| ||||||| |||||| ||||| ||||||| |
|
|
| T |
19103753 |
accgttccttttttagagtagctagctctctaatcctttatgtgttcgtgccttaattatcgtctctttccattgtagtaacgattctcaatttttgtaa |
19103852 |
T |
|
| Q |
190 |
tagttgcag-actatcacaataaattaaca |
218 |
Q |
| |
|
|||||| || ||||||||||| |||||||| |
|
|
| T |
19103853 |
tagttgtagtactatcacaatgaattaaca |
19103882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 7899299 - 7899184
Alignment:
| Q |
1 |
cattagtcacatcctgttggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattcttt-atcagtacgtgcacgatatac |
99 |
Q |
| |
|
|||| ||| |||||| ||||||||||||| |||||||||||||| ||||| ||||||||||||||||| ||||||||| |||||||||| || ||||||| |
|
|
| T |
7899299 |
catttgtcccatcctattggatgtgtttaggactttctttctagcaattcgtttcgtcaaaggattgactaattctttcatcagtacgtacaagatatac |
7899200 |
T |
|
| Q |
100 |
tttaaccgttcctttt |
115 |
Q |
| |
|
|||||| ||||||||| |
|
|
| T |
7899199 |
tttaactgttcctttt |
7899184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 8028752 - 8028520
Alignment:
| Q |
1 |
cattagtcacatcctgttggatgtgtttatgactttctttctagtaatt-cctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatac |
99 |
Q |
| |
|
||||| || |||||| |||||| |||||| | ||||||||||||||||| ||||||||||||||||||| || ||||||||||||| || || ||||| |
|
|
| T |
8028752 |
cattattcccatcctattggatatgtttaggtctttctttctagtaatttcctttcgtcaaaggattgactagttctttatcagtatgtacatgatatgt |
8028653 |
T |
|
| Q |
100 |
tttaaccgttcctttt-ag-------agctctctaatta-ttctgtgttcgtgccttaattatcgtttctcaccattgtggtaacg---ctcaaatt-tg |
186 |
Q |
| |
|
|||||| ||||||||| || ||||||||||| | || |||||||||| |||||||||||| ||| |||||| |||||| ||||| || || |
|
|
| T |
8028652 |
tttaactgttccttttgagagtagctagctctctaatcatttatgtgttcgtgtcttaattatcgtctcttttcattgtagtaacgattctcaatttatg |
8028553 |
T |
|
| Q |
187 |
taatagttgcag-actatcacaataaattaaca |
218 |
Q |
| |
|
|||||| ||||| ||||||||||| |||||||| |
|
|
| T |
8028552 |
taatagctgcagtactatcacaatgaattaaca |
8028520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 12316283 - 12316395
Alignment:
| Q |
1 |
cattagtcacatcctgttggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatact |
100 |
Q |
| |
|
|||||||| |||||| |||||||||||| ||||||||||||||| ||||||||||||||||||| | ||| || | || ||||||| || || |||| |
|
|
| T |
12316283 |
cattagtcccatcctactggatgtgtttaggactttctttctagttattcctttcgtcaaaggataaactaagtcatcattagtacgtacataatctact |
12316382 |
T |
|
| Q |
101 |
ttaaccgttcctt |
113 |
Q |
| |
|
||||||||||||| |
|
|
| T |
12316383 |
ttaaccgttcctt |
12316395 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 17681516 - 17681452
Alignment:
| Q |
1 |
cattagtcacatcctgttggatgtgtttatgactttctttctagtaattcctttcgtcaaaggat |
65 |
Q |
| |
|
|||||||| |||||| |||||||| ||| |||||||| ||| || | ||||||||||||||||| |
|
|
| T |
17681516 |
cattagtctcatcctattggatgtattttggactttctctcttgttagtcctttcgtcaaaggat |
17681452 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0061 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0061
Description:
Target: scaffold0061; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 48302 - 48187
Alignment:
| Q |
1 |
cattagtcacatcctgttggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattcttt-atcagtacgtgcacgatatac |
99 |
Q |
| |
|
|||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||| || ||||||| |
|
|
| T |
48302 |
cattagtcccatcctattggatgtgtttaggactttctttctagtaattcctttcgtcaaaggattgactaattgtttcatcagtacgtacatgatatac |
48203 |
T |
|
| Q |
100 |
tttaaccgttcctttt |
115 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
48202 |
tttaaccgttcctttt |
48187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0017 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0017
Description:
Target: scaffold0017; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 150331 - 150446
Alignment:
| Q |
1 |
cattagtcacatcctgttggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattcttt-atcagtacgtgcacgatatac |
99 |
Q |
| |
|
|||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||| || ||||||| |
|
|
| T |
150331 |
cattagtcccatcctattggatgtgtttaggactttctttctagtaattcctttcgtcaaaggattgactaattgtttcatcagtacgtacatgatatac |
150430 |
T |
|
| Q |
100 |
tttaaccgttcctttt |
115 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
150431 |
tttaaccgttcctttt |
150446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0015 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0015
Description:
Target: scaffold0015; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 212715 - 212600
Alignment:
| Q |
1 |
cattagtcacatcctgttggatgtgttt-atgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatac |
99 |
Q |
| |
|
|||||||| |||||| || ||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||| |
|
|
| T |
212715 |
cattagtctcatcctattcgatgtgttttaggactttctttctagtaattcctttcgtcaaaggattgactaattctttatcagtacgtacatgatatac |
212616 |
T |
|
| Q |
100 |
tttaaccgttcctttt |
115 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
212615 |
tttaaccgttcctttt |
212600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0060 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0060
Description:
Target: scaffold0060; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 51255 - 51146
Alignment:
| Q |
3 |
ttagtcacatcctgttggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatacttt |
102 |
Q |
| |
|
||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||| | ||| || |||||||||| |
|
|
| T |
51255 |
ttagtcacatcctattggatgtgtttaggactttctttctagtaattcctttcgtcaaaggattgactaattctt--tca-tccgtacatgatatacttt |
51159 |
T |
|
| Q |
103 |
aaccgttcctttt |
115 |
Q |
| |
|
||||||||||||| |
|
|
| T |
51158 |
aaccgttcctttt |
51146 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0070 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0070
Description:
Target: scaffold0070; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 60156 - 60256
Alignment:
| Q |
1 |
cattagtcacatcctgttggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattcttt-atcagtacgtgcacgatatac |
99 |
Q |
| |
|
|||||||| |||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||| || ||||||| |
|
|
| T |
60156 |
cattagtc-catcctattggatgtgtttaggactttctttctagttattcctttcgtcaaaggattgactaattctttcatcagtacgtacatgatatac |
60254 |
T |
|
| Q |
100 |
tt |
101 |
Q |
| |
|
|| |
|
|
| T |
60255 |
tt |
60256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0070; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 64358 - 64458
Alignment:
| Q |
1 |
cattagtcacatcctgttggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattcttt-atcagtacgtgcacgatatac |
99 |
Q |
| |
|
|||||||| |||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||| || ||||||| |
|
|
| T |
64358 |
cattagtc-catcctattggatgtgtttaggactttctttctagttattcctttcgtcaaaggattgactaattctttcatcagtacgtacatgatatac |
64456 |
T |
|
| Q |
100 |
tt |
101 |
Q |
| |
|
|| |
|
|
| T |
64457 |
tt |
64458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0108 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0108
Description:
Target: scaffold0108; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 21483 - 21597
Alignment:
| Q |
1 |
cattagtcacatcctgttggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatact |
100 |
Q |
| |
|
|||||||| |||||| |||||||||||| |||||||||||||||||||| ||| ||||||||||| | ||||||||||||||||| | || ||| |||| |
|
|
| T |
21483 |
cattagtcccatcctaatggatgtgtttaggactttctttctagtaattcattttgtcaaaggattaactaattctttatcagtacatacatgatctact |
21582 |
T |
|
| Q |
101 |
ttaaccgttcctttt |
115 |
Q |
| |
|
| ||||||| ||||| |
|
|
| T |
21583 |
tcaaccgtttctttt |
21597 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0690 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0690
Description:
Target: scaffold0690; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 115
Target Start/End: Original strand, 6871 - 6966
Alignment:
| Q |
17 |
ttggatgtgtttatgactttctttctagtaattcctttcgtcaaaggattgaataattctttatcagtacgtgcacgatatactttaaccgttcctttt |
115 |
Q |
| |
|
||||||||||||| |||||| || ||| ||||||||||||||||||| | |||||||| |||| ||||| || ||||||||||| |||||||||| |
|
|
| T |
6871 |
ttggatgtgtttaggactttgtt---agttattcctttcgtcaaaggatcaattaattcttcatcattacgtacatgatatactttattcgttcctttt |
6966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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