View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16525_low_10 (Length: 252)

Name: NF16525_low_10
Description: NF16525
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16525_low_10
NF16525_low_10
[»] chr1 (64 HSPs)
chr1 (1-243)||(47455333-47455575)
chr1 (23-223)||(47451194-47451394)
chr1 (21-223)||(19798980-19799182)
chr1 (21-223)||(23192785-23192986)
chr1 (21-223)||(51041430-51041630)
chr1 (21-223)||(39588334-39588536)
chr1 (21-223)||(33301147-33301349)
chr1 (21-223)||(40165906-40166108)
chr1 (21-223)||(16649580-16649781)
chr1 (21-223)||(26927689-26927891)
chr1 (21-223)||(10135382-10135584)
chr1 (21-223)||(16035528-16035736)
chr1 (76-218)||(3094045-3094187)
chr1 (91-223)||(25855097-25855229)
chr1 (19-218)||(38620624-38620822)
chr1 (21-223)||(10140015-10140217)
chr1 (52-221)||(18784547-18784716)
chr1 (20-166)||(12259979-12260125)
chr1 (112-223)||(16832027-16832138)
chr1 (140-223)||(25843738-25843821)
chr1 (52-174)||(8900229-8900351)
chr1 (21-167)||(11806341-11806487)
chr1 (53-159)||(2493817-2493923)
chr1 (53-153)||(10106100-10106199)
chr1 (54-138)||(12906166-12906248)
chr1 (54-153)||(38734272-38734370)
chr1 (21-119)||(8137969-8138067)
chr1 (54-159)||(27761839-27761944)
chr1 (39-160)||(5346652-5346773)
chr1 (37-138)||(33380905-33381004)
chr1 (19-107)||(16833526-16833614)
chr1 (54-153)||(13890810-13890908)
chr1 (54-153)||(39747165-39747263)
chr1 (21-83)||(25843822-25843884)
chr1 (54-150)||(5724979-5725074)
chr1 (54-150)||(36684715-36684810)
chr1 (37-159)||(24159783-24159904)
chr1 (54-153)||(26651166-26651264)
chr1 (54-159)||(36724698-36724803)
chr1 (54-150)||(3584601-3584696)
chr1 (54-150)||(11251113-11251208)
chr1 (54-150)||(34318224-34318319)
chr1 (54-150)||(37404416-37404511)
chr1 (54-153)||(5602425-5602523)
chr1 (57-159)||(4632929-4633031)
chr1 (53-138)||(23193222-23193306)
chr1 (54-150)||(5730105-5730200)
chr1 (26-114)||(25779288-25779376)
chr1 (54-150)||(37409537-37409632)
chr1 (54-153)||(14582096-14582194)
chr1 (115-153)||(8267891-8267929)
chr1 (114-159)||(19422937-19422982)
chr1 (109-150)||(27716443-27716484)
chr1 (24-161)||(28434544-28434680)
chr1 (174-223)||(46696596-46696645)
chr1 (54-138)||(31063968-31064050)
chr1 (56-118)||(28858065-28858126)
chr1 (109-150)||(11387884-11387925)
chr1 (174-223)||(12259911-12259959)
chr1 (90-131)||(25661858-25661899)
chr1 (41-138)||(32987252-32987347)
chr1 (120-153)||(41098017-41098050)
chr1 (179-223)||(8900162-8900206)
chr1 (174-222)||(28434705-28434753)
[»] scaffold0182 (1 HSPs)
scaffold0182 (21-223)||(9854-10056)
[»] chr5 (57 HSPs)
chr5 (21-223)||(29167940-29168142)
chr5 (21-223)||(556621-556823)
chr5 (21-223)||(561393-561595)
chr5 (23-223)||(41996591-41996791)
chr5 (23-223)||(42001360-42001560)
chr5 (21-223)||(12102950-12103153)
chr5 (21-223)||(26667198-26667400)
chr5 (21-223)||(26938795-26938997)
chr5 (21-218)||(36428640-36428837)
chr5 (21-223)||(12501866-12502069)
chr5 (21-200)||(36942232-36942411)
chr5 (21-223)||(39522974-39523177)
chr5 (21-223)||(6155386-6155588)
chr5 (21-223)||(39518336-39518538)
chr5 (21-223)||(12045106-12045309)
chr5 (21-200)||(36937478-36937657)
chr5 (37-226)||(37248778-37248967)
chr5 (21-221)||(36423565-36423765)
chr5 (24-223)||(7451684-7451883)
chr5 (21-223)||(41587127-41587329)
chr5 (21-224)||(3665856-3666060)
chr5 (26-223)||(10759792-10759992)
chr5 (19-223)||(6514566-6514769)
chr5 (51-223)||(37652827-37652999)
chr5 (24-216)||(40147828-40148020)
chr5 (21-218)||(11981247-11981443)
chr5 (21-223)||(20181030-20181233)
chr5 (21-223)||(12041899-12042101)
chr5 (37-223)||(35679858-35680047)
chr5 (21-219)||(32461516-32461702)
chr5 (24-169)||(12102801-12102946)
chr5 (21-167)||(16116216-16116362)
chr5 (58-166)||(15414885-15414993)
chr5 (141-223)||(37550089-37550170)
chr5 (23-84)||(4871987-4872048)
chr5 (54-150)||(13582690-13582785)
chr5 (54-150)||(24435869-24435964)
chr5 (54-153)||(7805068-7805166)
chr5 (54-153)||(14374132-14374230)
chr5 (54-150)||(36253826-36253921)
chr5 (21-174)||(9911128-9911280)
chr5 (51-104)||(37550029-37550082)
chr5 (54-150)||(17510058-17510153)
chr5 (21-154)||(13301454-13301585)
chr5 (37-138)||(18265489-18265588)
chr5 (53-150)||(24771356-24771452)
chr5 (177-221)||(12104205-12104249)
chr5 (54-150)||(42019573-42019668)
chr5 (53-159)||(1414050-1414155)
chr5 (109-150)||(26709102-26709143)
chr5 (109-150)||(26978836-26978877)
chr5 (54-150)||(17504953-17505048)
chr5 (114-150)||(41853548-41853584)
chr5 (109-159)||(24776869-24776919)
chr5 (53-134)||(1286265-1286344)
chr5 (174-219)||(9496714-9496759)
chr5 (120-153)||(31731540-31731573)
[»] scaffold0002 (2 HSPs)
scaffold0002 (21-225)||(3998-4202)
scaffold0002 (26-223)||(443917-444101)
[»] chr3 (73 HSPs)
chr3 (21-228)||(3672505-3672712)
chr3 (21-223)||(3692542-3692744)
chr3 (21-225)||(39775695-39775899)
chr3 (21-223)||(7571185-7571387)
chr3 (21-223)||(18467149-18467351)
chr3 (21-223)||(23666090-23666292)
chr3 (21-223)||(24038338-24038540)
chr3 (21-223)||(8069603-8069805)
chr3 (21-223)||(8883094-8883296)
chr3 (21-218)||(758335-758532)
chr3 (21-218)||(3033573-3033770)
chr3 (19-223)||(18471932-18472135)
chr3 (21-223)||(14438662-14438864)
chr3 (20-223)||(3418918-3419122)
chr3 (24-223)||(8887854-8888053)
chr3 (37-224)||(29350163-29350350)
chr3 (21-221)||(12965840-12966040)
chr3 (21-200)||(32474647-32474824)
chr3 (21-220)||(55431242-55431441)
chr3 (23-223)||(20519978-20520178)
chr3 (24-227)||(49971394-49971597)
chr3 (19-167)||(12971598-12971746)
chr3 (21-223)||(3657207-3657409)
chr3 (21-221)||(29715570-29715770)
chr3 (21-223)||(23661431-23661619)
chr3 (41-223)||(12112628-12112822)
chr3 (97-224)||(27708802-27708928)
chr3 (21-124)||(27708959-27709062)
chr3 (23-167)||(28125097-28125242)
chr3 (109-223)||(2207762-2207876)
chr3 (54-159)||(26962050-26962154)
chr3 (54-153)||(13022024-13022122)
chr3 (21-166)||(20507637-20507779)
chr3 (91-158)||(25726830-25726897)
chr3 (54-153)||(33089343-33089441)
chr3 (37-159)||(48432398-48432519)
chr3 (54-150)||(20090662-20090757)
chr3 (54-150)||(20095787-20095882)
chr3 (54-150)||(34129169-34129264)
chr3 (54-153)||(20810369-20810467)
chr3 (54-153)||(53119524-53119622)
chr3 (54-159)||(48435828-48435933)
chr3 (54-159)||(15768191-15768295)
chr3 (54-150)||(17364063-17364160)
chr3 (54-150)||(3476946-3477041)
chr3 (54-138)||(4662196-4662279)
chr3 (54-150)||(15763030-15763125)
chr3 (41-132)||(16013724-16013816)
chr3 (54-150)||(17368719-17368814)
chr3 (54-153)||(2617256-2617355)
chr3 (54-153)||(38436991-38437089)
chr3 (174-223)||(16013644-16013693)
chr3 (37-138)||(16983006-16983105)
chr3 (54-150)||(17357836-17357933)
chr3 (54-159)||(27605135-27605240)
chr3 (54-150)||(3482423-3482518)
chr3 (19-83)||(6596322-6596386)
chr3 (21-165)||(19276887-19277031)
chr3 (54-150)||(54270644-54270739)
chr3 (26-76)||(55325847-55325897)
chr3 (54-151)||(21494302-21494399)
chr3 (53-159)||(7806553-7806656)
chr3 (54-150)||(55128790-55128885)
chr3 (109-148)||(10321444-10321483)
chr3 (52-162)||(17026103-17026213)
chr3 (53-131)||(46964031-46964109)
chr3 (115-153)||(53358239-53358277)
chr3 (53-98)||(1741108-1741153)
chr3 (54-159)||(4117600-4117704)
chr3 (120-153)||(10586248-10586281)
chr3 (109-150)||(30341898-30341939)
chr3 (52-131)||(1641069-1641149)
chr3 (116-148)||(1688948-1688980)
[»] chr2 (47 HSPs)
chr2 (21-223)||(30650855-30651057)
chr2 (21-223)||(9189770-9189972)
chr2 (21-223)||(19892433-19892635)
chr2 (21-223)||(9180691-9180893)
chr2 (21-223)||(18344357-18344559)
chr2 (21-224)||(1934960-1935163)
chr2 (21-223)||(7737818-7738020)
chr2 (21-223)||(31326665-31326867)
chr2 (21-223)||(35601848-35602050)
chr2 (21-223)||(35638964-35639166)
chr2 (26-223)||(10160696-10160893)
chr2 (21-223)||(30658189-30658391)
chr2 (21-223)||(42926726-42926929)
chr2 (26-223)||(25478269-25478470)
chr2 (36-223)||(30631505-30631692)
chr2 (21-223)||(12796851-12797053)
chr2 (26-223)||(25497297-25497498)
chr2 (21-217)||(28603230-28603431)
chr2 (21-223)||(29677308-29677509)
chr2 (21-223)||(29677694-29677895)
chr2 (21-169)||(19094461-19094610)
chr2 (41-223)||(19578401-19578595)
chr2 (24-169)||(40847565-40847710)
chr2 (23-164)||(21523689-21523829)
chr2 (136-223)||(15489796-15489883)
chr2 (26-174)||(17545270-17545419)
chr2 (78-223)||(20711358-20711516)
chr2 (54-153)||(42914639-42914737)
chr2 (54-159)||(160031-160136)
chr2 (54-151)||(5089277-5089373)
chr2 (54-150)||(42723451-42723546)
chr2 (54-150)||(42728620-42728715)
chr2 (54-150)||(44096302-44096397)
chr2 (54-150)||(44754596-44754691)
chr2 (54-150)||(44759762-44759857)
chr2 (37-159)||(14104580-14104701)
chr2 (54-159)||(44957437-44957542)
chr2 (54-150)||(40518472-40518567)
chr2 (18-173)||(32079354-32079510)
chr2 (115-151)||(39542900-39542936)
chr2 (179-223)||(40847735-40847779)
chr2 (41-168)||(7734581-7734707)
chr2 (115-153)||(19538382-19538420)
chr2 (120-153)||(6297951-6297984)
chr2 (109-150)||(28751783-28751824)
chr2 (115-159)||(39542566-39542610)
chr2 (54-150)||(40392319-40392414)
[»] scaffold0352 (1 HSPs)
scaffold0352 (21-224)||(7029-7232)
[»] chr4 (81 HSPs)
chr4 (21-223)||(31273447-31273649)
chr4 (21-223)||(5271386-5271586)
chr4 (21-223)||(37259844-37260046)
chr4 (21-223)||(37264531-37264733)
chr4 (21-225)||(8693635-8693839)
chr4 (21-221)||(31268962-31269162)
chr4 (21-223)||(16420956-16421157)
chr4 (21-223)||(5928186-5928388)
chr4 (21-223)||(55251647-55251847)
chr4 (21-223)||(8030443-8030645)
chr4 (19-189)||(33463321-33463491)
chr4 (52-223)||(13521990-13522162)
chr4 (21-218)||(33468940-33469137)
chr4 (21-225)||(19101901-19102105)
chr4 (52-223)||(12823893-12824064)
chr4 (21-223)||(32082058-32082259)
chr4 (33-200)||(31765831-31766002)
chr4 (26-221)||(51697841-51698040)
chr4 (19-205)||(13059354-13059540)
chr4 (21-211)||(47244186-47244376)
chr4 (21-167)||(42758722-42758868)
chr4 (53-223)||(19106545-19106715)
chr4 (22-206)||(47574567-47574752)
chr4 (22-190)||(19906210-19906377)
chr4 (21-223)||(48276616-48276807)
chr4 (120-223)||(32221163-32221266)
chr4 (21-223)||(31729354-31729540)
chr4 (19-162)||(19541126-19541269)
chr4 (79-217)||(51696931-51697072)
chr4 (37-166)||(12878222-12878351)
chr4 (64-174)||(13065778-13065888)
chr4 (52-167)||(2819826-2819941)
chr4 (21-167)||(4550980-4551125)
chr4 (24-166)||(12874522-12874664)
chr4 (43-167)||(1151286-1151411)
chr4 (21-175)||(32545068-32545223)
chr4 (54-150)||(653043-653138)
chr4 (56-159)||(10120811-10120913)
chr4 (51-127)||(16953107-16953183)
chr4 (24-160)||(16947994-16948126)
chr4 (164-222)||(55810257-55810315)
chr4 (53-138)||(16595933-16596017)
chr4 (53-138)||(20513118-20513202)
chr4 (54-150)||(36354176-36354271)
chr4 (54-150)||(36359294-36359389)
chr4 (54-150)||(39999069-39999164)
chr4 (54-150)||(40004027-40004122)
chr4 (54-150)||(53797629-53797724)
chr4 (54-150)||(54343203-54343298)
chr4 (54-150)||(54348357-54348452)
chr4 (37-159)||(33722904-33723025)
chr4 (41-138)||(15020454-15020549)
chr4 (88-157)||(52691089-52691158)
chr4 (89-165)||(6070571-6070647)
chr4 (54-150)||(8980285-8980380)
chr4 (54-150)||(8985405-8985500)
chr4 (54-150)||(13700510-13700605)
chr4 (54-150)||(21299833-21299928)
chr4 (54-150)||(41393245-41393340)
chr4 (54-150)||(51019373-51019468)
chr4 (54-150)||(54991486-54991581)
chr4 (54-153)||(24490028-24490127)
chr4 (41-151)||(40408196-40408307)
chr4 (54-150)||(13695159-13695254)
chr4 (54-150)||(21304953-21305048)
chr4 (54-150)||(47046307-47046402)
chr4 (174-217)||(23093112-23093155)
chr4 (54-148)||(8083027-8083121)
chr4 (175-223)||(8652129-8652178)
chr4 (175-223)||(8663936-8663985)
chr4 (54-150)||(13710669-13710763)
chr4 (24-67)||(8649600-8649643)
chr4 (24-67)||(8661407-8661450)
chr4 (114-153)||(10318839-10318878)
chr4 (90-144)||(30564450-30564504)
chr4 (40-167)||(39217367-39217490)
chr4 (115-153)||(39319628-39319666)
chr4 (174-223)||(12878153-12878202)
chr4 (120-153)||(34560494-34560527)
chr4 (114-171)||(34644536-34644593)
chr4 (121-153)||(3998123-3998155)
[»] chr8 (65 HSPs)
chr8 (26-226)||(33416470-33416670)
chr8 (21-223)||(31449833-31450035)
chr8 (21-223)||(17025861-17026063)
chr8 (21-223)||(17556353-17556555)
chr8 (21-223)||(18876334-18876535)
chr8 (26-226)||(44925895-44926095)
chr8 (21-223)||(34118392-34118594)
chr8 (21-223)||(38182204-38182405)
chr8 (21-223)||(1910936-1911138)
chr8 (21-223)||(1807398-1807601)
chr8 (21-168)||(40125852-40125999)
chr8 (90-223)||(40130722-40130855)
chr8 (21-221)||(28559621-28559821)
chr8 (76-218)||(4238337-4238479)
chr8 (21-175)||(19166608-19166762)
chr8 (76-218)||(4243076-4243218)
chr8 (21-167)||(15875635-15875781)
chr8 (21-169)||(17953839-17953988)
chr8 (21-177)||(36683551-36683707)
chr8 (26-174)||(24090602-24090750)
chr8 (21-223)||(2965545-2965758)
chr8 (19-174)||(23548597-23548752)
chr8 (48-223)||(43302712-43302880)
chr8 (44-181)||(2355449-2355586)
chr8 (141-223)||(19915073-19915155)
chr8 (24-151)||(7902561-7902688)
chr8 (21-160)||(28564786-28564927)
chr8 (21-160)||(28572409-28572550)
chr8 (54-151)||(33616727-33616823)
chr8 (54-153)||(19430011-19430109)
chr8 (54-153)||(19435513-19435611)
chr8 (54-153)||(19566160-19566258)
chr8 (54-153)||(19571662-19571760)
chr8 (54-153)||(31030525-31030623)
chr8 (54-169)||(29220246-29220359)
chr8 (54-150)||(32015700-32015795)
chr8 (18-152)||(17793450-17793584)
chr8 (53-138)||(2469986-2470070)
chr8 (37-159)||(4544235-4544356)
chr8 (73-159)||(19954262-19954348)
chr8 (21-107)||(10933474-10933559)
chr8 (54-159)||(13584341-13584453)
chr8 (54-159)||(19949808-19949913)
chr8 (45-167)||(24673316-24673438)
chr8 (21-118)||(12820370-12820467)
chr8 (54-150)||(17955789-17955884)
chr8 (21-84)||(15951523-15951585)
chr8 (44-138)||(20072109-20072200)
chr8 (89-170)||(5883978-5884058)
chr8 (54-146)||(21644081-21644172)
chr8 (53-153)||(42157871-42157970)
chr8 (54-150)||(42514374-42514469)
chr8 (21-77)||(43302658-43302714)
chr8 (37-128)||(34517263-34517351)
chr8 (117-151)||(15951584-15951618)
chr8 (56-150)||(24884712-24884805)
chr8 (20-121)||(27415539-27415640)
chr8 (54-159)||(43999230-43999334)
chr8 (153-215)||(28565268-28565330)
chr8 (153-215)||(28572891-28572953)
chr8 (120-158)||(34818764-34818802)
chr8 (120-158)||(37771703-37771741)
chr8 (109-150)||(32010538-32010579)
chr8 (187-223)||(15951623-15951659)
chr8 (191-223)||(40126000-40126032)
[»] chr7 (55 HSPs)
chr7 (21-218)||(4930164-4930361)
chr7 (21-223)||(8268219-8268421)
chr7 (24-212)||(26341136-26341324)
chr7 (23-223)||(8075975-8076176)
chr7 (21-221)||(13314203-13314403)
chr7 (52-223)||(9650965-9651137)
chr7 (21-223)||(44423104-44423307)
chr7 (21-167)||(4579490-4579636)
chr7 (21-200)||(44510644-44510823)
chr7 (23-169)||(23246902-23247048)
chr7 (21-152)||(23866065-23866196)
chr7 (21-226)||(27238164-27238370)
chr7 (71-220)||(42627214-42627364)
chr7 (21-223)||(10388334-10388546)
chr7 (21-167)||(25543329-25543475)
chr7 (91-223)||(30256780-30256912)
chr7 (56-174)||(3357634-3357752)
chr7 (26-167)||(12254061-12254202)
chr7 (21-223)||(21671109-21671323)
chr7 (21-165)||(9008147-9008291)
chr7 (21-223)||(3879922-3880123)
chr7 (39-169)||(29150914-29151044)
chr7 (21-223)||(26287112-26287339)
chr7 (52-166)||(16372381-16372491)
chr7 (54-153)||(24528351-24528449)
chr7 (19-104)||(12799455-12799540)
chr7 (21-174)||(15642209-15642362)
chr7 (19-125)||(6590948-6591054)
chr7 (53-153)||(9973459-9973558)
chr7 (54-150)||(33238002-33238097)
chr7 (54-150)||(47998975-47999070)
chr7 (75-136)||(29478176-29478236)
chr7 (54-150)||(2234630-2234725)
chr7 (54-150)||(16539412-16539507)
chr7 (54-150)||(16626155-16626250)
chr7 (54-150)||(32212654-32212749)
chr7 (54-150)||(33243179-33243274)
chr7 (54-150)||(42571945-42572040)
chr7 (54-150)||(47993800-47993895)
chr7 (21-83)||(30258166-30258228)
chr7 (54-148)||(33226416-33226509)
chr7 (37-126)||(13142884-13142973)
chr7 (54-150)||(21081039-21081136)
chr7 (57-153)||(28292506-28292600)
chr7 (54-150)||(47177119-47177214)
chr7 (57-159)||(6898359-6898461)
chr7 (56-136)||(3284740-3284820)
chr7 (54-150)||(12934397-12934492)
chr7 (54-150)||(17495403-17495498)
chr7 (54-150)||(17557716-17557811)
chr7 (54-150)||(43892858-43892953)
chr7 (55-138)||(1289334-1289416)
chr7 (109-150)||(22857741-22857782)
chr7 (120-153)||(27256239-27256272)
chr7 (115-171)||(7875158-7875214)
[»] chr6 (62 HSPs)
chr6 (21-228)||(2700073-2700281)
chr6 (24-223)||(6407830-6408029)
chr6 (24-221)||(12688899-12689096)
chr6 (24-211)||(11570719-11570906)
chr6 (21-223)||(8747708-8747910)
chr6 (19-224)||(33687568-33687773)
chr6 (21-223)||(21308960-21309159)
chr6 (77-224)||(19674238-19674385)
chr6 (19-200)||(14508933-14509114)
chr6 (19-167)||(24589129-24589277)
chr6 (112-224)||(11534736-11534848)
chr6 (112-224)||(11560246-11560358)
chr6 (19-167)||(29892226-29892374)
chr6 (85-217)||(11427975-11428108)
chr6 (21-169)||(12406320-12406468)
chr6 (21-165)||(20748251-20748395)
chr6 (26-223)||(25316535-25316739)
chr6 (26-223)||(26204029-26204233)
chr6 (21-169)||(13736645-13736793)
chr6 (21-167)||(11614059-11614205)
chr6 (37-129)||(16836139-16836231)
chr6 (21-129)||(17964526-17964634)
chr6 (19-163)||(22695236-22695380)
chr6 (158-220)||(17964634-17964696)
chr6 (54-153)||(19478145-19478243)
chr6 (56-153)||(3901909-3902006)
chr6 (21-167)||(22609556-22609696)
chr6 (54-154)||(12183000-12183100)
chr6 (54-153)||(13605092-13605190)
chr6 (73-138)||(35129640-35129704)
chr6 (54-150)||(22698243-22698338)
chr6 (54-150)||(31981560-31981655)
chr6 (54-150)||(34142080-34142175)
chr6 (54-150)||(34154696-34154791)
chr6 (19-78)||(11534676-11534735)
chr6 (19-78)||(11560186-11560245)
chr6 (39-226)||(2760240-2760427)
chr6 (41-130)||(32815051-32815138)
chr6 (54-154)||(5600972-5601072)
chr6 (21-165)||(9751775-9751920)
chr6 (54-153)||(10642706-10642805)
chr6 (120-166)||(2882821-2882867)
chr6 (54-150)||(21396699-21396794)
chr6 (54-150)||(24192480-24192575)
chr6 (54-150)||(29491237-29491332)
chr6 (54-150)||(34375919-34376014)
chr6 (120-166)||(2863518-2863564)
chr6 (115-153)||(11956762-11956800)
chr6 (26-152)||(12851809-12851937)
chr6 (109-150)||(21401755-21401796)
chr6 (174-223)||(22609481-22609530)
chr6 (109-150)||(24191437-24191478)
chr6 (92-138)||(14041703-14041749)
chr6 (21-98)||(4157336-4157413)
chr6 (117-150)||(6728397-6728430)
chr6 (177-218)||(13736814-13736855)
chr6 (174-223)||(15991829-15991878)
chr6 (174-223)||(15999491-15999540)
chr6 (53-110)||(31990898-31990955)
chr6 (182-222)||(12406491-12406531)
chr6 (109-153)||(17281618-17281662)
chr6 (24-88)||(19995373-19995437)
[»] scaffold0012 (1 HSPs)
scaffold0012 (21-224)||(166053-166257)
[»] scaffold0054 (2 HSPs)
scaffold0054 (24-223)||(25325-25524)
scaffold0054 (19-96)||(29209-29285)
[»] scaffold0057 (1 HSPs)
scaffold0057 (21-223)||(35560-35762)
[»] scaffold0045 (1 HSPs)
scaffold0045 (21-223)||(82991-83194)
[»] scaffold0240 (1 HSPs)
scaffold0240 (43-174)||(3966-4097)
[»] scaffold2020 (1 HSPs)
scaffold2020 (37-224)||(282-483)
[»] scaffold0009 (1 HSPs)
scaffold0009 (37-224)||(165012-165213)
[»] scaffold0008 (1 HSPs)
scaffold0008 (21-162)||(255804-255945)
[»] scaffold0184 (1 HSPs)
scaffold0184 (21-167)||(2291-2436)
[»] scaffold0018 (1 HSPs)
scaffold0018 (37-159)||(171700-171820)
[»] scaffold0097 (1 HSPs)
scaffold0097 (78-223)||(15197-15355)
[»] scaffold0132 (2 HSPs)
scaffold0132 (54-153)||(2772-2870)
scaffold0132 (54-153)||(10732-10830)
[»] scaffold0011 (4 HSPs)
scaffold0011 (54-153)||(1562-1660)
scaffold0011 (54-153)||(7043-7141)
scaffold0011 (22-80)||(155486-155544)
scaffold0011 (111-146)||(155552-155587)
[»] scaffold0060 (1 HSPs)
scaffold0060 (54-159)||(37001-37105)
[»] scaffold0128 (1 HSPs)
scaffold0128 (24-156)||(13265-13397)
[»] scaffold0055 (1 HSPs)
scaffold0055 (54-150)||(3058-3153)
[»] scaffold0052 (1 HSPs)
scaffold0052 (54-150)||(81382-81477)
[»] scaffold0594 (1 HSPs)
scaffold0594 (54-150)||(9208-9303)
[»] scaffold0166 (2 HSPs)
scaffold0166 (54-150)||(13740-13835)
scaffold0166 (109-159)||(19252-19302)
[»] scaffold0067 (1 HSPs)
scaffold0067 (109-153)||(34023-34067)
[»] scaffold0014 (2 HSPs)
scaffold0014 (54-150)||(31545-31640)
scaffold0014 (54-150)||(26373-26468)
[»] scaffold0517 (1 HSPs)
scaffold0517 (54-150)||(3563-3658)
[»] scaffold1050 (1 HSPs)
scaffold1050 (21-138)||(1151-1268)
[»] scaffold0020 (1 HSPs)
scaffold0020 (120-158)||(1291-1329)


Alignment Details
Target: chr1 (Bit Score: 227; Significance: 1e-125; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 47455333 - 47455575
Alignment:
Q  1 atccaataggatgtgactaatgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47455333 atccaataggatgtgactaatgcagtagttaatcgaacagttgtagctaggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaatt 47455432  T
Q  101 ttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaac 200  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  47455433 ttggacattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctaataacaacttcggtggataatagaatttggaaatccaaatacaac 47455532  T
Q  201 tgtttggaaatccaaaaacaacagaacttgaatcatgtatgcc 243  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  47455533 tgtttggaaatccaaaaacaacagaacttgaatcatgtatgcc 47455575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 23 - 223
Target Start/End: Original strand, 47451194 - 47451394
Alignment:
Q  23 cagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtc 122  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||| |||| ||||| ||||||||    
T  47451194 cagtagttaatcgaacagttgtagttgagcttgttttatcttggaggcggcgtggttgatagtctgtcttgcacaatttttggcagtgccatgaaacgtc 47451293  T
Q  123 ttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaac 222  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47451294 ttaaagagagcgacctggtcgtgactcaacctagtaataatttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaac 47451393  T
Q  223 a 223  Q
    |    
T  47451394 a 47451394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 21 - 223
Target Start/End: Original strand, 19798980 - 19799182
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  | ||||||||||||    
T  19798980 tgcagtagttaaccgcacagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttggatagtgccacgaaacg 19799079  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||| ||||| |||||||||||||    
T  19799080 tcttaaagagagcgatctgatcgtgactcaacctagtaacaacttcgatagataatagaatttgaaaatccaaatacaacagtttgaaaatccaaaaaca 19799179  T
Q  221 aca 223  Q
    |||    
T  19799180 aca 19799182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 21 - 223
Target Start/End: Original strand, 23192785 - 23192986
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    ||||||||||||||||||| |||||| ||| |||||||||||||||||| ||||||||||||| |||| |||| ||||||||||||| ||||||||||||    
T  23192785 tgcagtagttaatcgaacaattgtagctgg-cttgttttatcctggaggaggcgtggttgatagtctgccttgtacaattttgggcagtgccacgaaacg 23192883  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||| ||||| |||||||||||||    
T  23192884 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaaaccaaacacaacagtttgaaaatccaaaaaca 23192983  T
Q  221 aca 223  Q
    |||    
T  23192984 aca 23192986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 21 - 223
Target Start/End: Original strand, 51041430 - 51041630
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    ||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||| |||| |||||||||||| ||||| ||||||||||||    
T  51041430 tgcagtaattaatcgaacagttgtagctgggcttgttttatcttggaggcggcgtggttgatagtctgccttgcacaattt-gggcagtgccacgaaacg 51041528  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||    
T  51041529 tcttaaa-agagcgacctggtcgtgactcaacttagtaacaacttcggtagataatagaatttggaaatccaaatacatcagtttggaaatccaaaaaca 51041627  T
Q  221 aca 223  Q
    |||    
T  51041628 aca 51041630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 21 - 223
Target Start/End: Original strand, 39588334 - 39588536
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    ||||||||||||||||||| |||||| || ||||| ||||||||||||  |||||||| |||| |||||||||||||||||||| || ||||||||||||    
T  39588334 tgcagtagttaatcgaacaattgtagatgagcttgctttatcctggagtaggcgtggtagatagtctgtcttgcacaattttggacagtgccacgaaacg 39588433  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  39588434 tcttaaagagagcgacctgatcgtgacttaacctagtaacaatttcggtggataatataatttggaaatccaaatacaactatttggaaatccaaaaaca 39588533  T
Q  221 aca 223  Q
    |||    
T  39588534 aca 39588536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 21 - 223
Target Start/End: Original strand, 33301147 - 33301349
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| || |||||||||| ||   ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  33301147 tgcagtagttaaccgcacagttgtagatgaaattgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacg 33301246  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||||||| |||||||||||||| |||| ||||||||||||| | | |||||||||||||||||||||||||||||| | |||||||||||||||||    
T  33301247 tcttaaagagaacgacctggtcgtgattcaagctagtaacaactttgatagataatagaatttggaaatccaaatacaacagattggaaatccaaaaaca 33301346  T
Q  221 aca 223  Q
    |||    
T  33301347 aca 33301349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 21 - 223
Target Start/End: Complemental strand, 40166108 - 40165906
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    ||||||||||||||| | ||||||||||| |||||||||||||| |||||||||| |||| || |||| |||||||||||||||||| ||||||||||||    
T  40166108 tgcagtagttaatcgtatagttgtagttgtgcttgttttatcctagaggcggcgttgttgttagtctgccttgcacaattttgggcagtgccacgaaacg 40166009  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||| ||||| ||||| |||||||    
T  40166008 tcttaaagagagcgacatggtcgtgactcaacctagtaacaacttcggtagataatagaatatggtaatccaaatacaacagtttgaaaatctaaaaaca 40165909  T
Q  221 aca 223  Q
    |||    
T  40165908 aca 40165906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 21 - 223
Target Start/End: Original strand, 16649580 - 16649781
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| |  |||||||||| ||| |||||||||||| ||||||||||||||||||| ||| |||||||||||||||| || |||||| |||||    
T  16649580 tgcagtagttaaccacacagttgtagctggacttgttttatcccggaggcggcgtggttgatagtctatcttgcacaattttggacagtgccac-aaacg 16649678  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||| ||||| |||||||||||||    
T  16649679 tcttaaagagagcgacctggtcgtgactcaacttagtaacaacttcggtagataatagaatttggaaattcaaatacaacagtttgaaaatccaaaaaca 16649778  T
Q  221 aca 223  Q
    |||    
T  16649779 aca 16649781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 21 - 223
Target Start/End: Original strand, 26927689 - 26927891
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    ||||||||||||  | |||||||||| ||||||||||||||  | |||||||||||||||||| |||| |||||||||||||||||| ||||||||||||    
T  26927689 tgcagtagttaagtgtacagttgtagctgggcttgttttattttagaggcggcgtggttgatagtctgccttgcacaattttgggcaatgccacgaaacg 26927788  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||| ||||| |||||||||||||    
T  26927789 tcttaaagagagcgacttagtcgtgactcaacctagtaacaacttcggtagataatagaatttaaaaatccaaatacaacagtttgaaaatccaaaaaca 26927888  T
Q  221 aca 223  Q
    |||    
T  26927889 aca 26927891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 21 - 223
Target Start/End: Complemental strand, 10135584 - 10135382
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| || ||||||| |  ||||||||||||||||| |||||||||||||||||  |||| ||||||||||||| || | ||||||||||||    
T  10135584 tgcagtagttaaccgcacagttgcaactgggcttgttttatcctagaggcggcgtggttgattgtctgccttgcacaattttaggtagtgccacgaaacg 10135485  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||   |||||||||| ||||||||    
T  10135484 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaacttggaaatccaaatacaggagtttggaaatacaaaaaca 10135385  T
Q  221 aca 223  Q
    |||    
T  10135384 aca 10135382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 21 - 223
Target Start/End: Complemental strand, 16035736 - 16035528
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| |  ||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||    
T  16035736 tgcagtagttaaccacacatttgtagatgagcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaactttggacagtgccacgaaacg 16035637  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggata------atagaatttggaaatccaaatacaactgtttggaaatcca 214  Q
    | |||||||| |||||||||||||||||||||||||||||||||| ||| ||||       ||||||||| ||||||||||||||| |||||||||||||    
T  16035636 tgttaaagagggcgacctggtcgtgactcaacctagtaacaactttggtagatattcattttagaatttgaaaatccaaatacaacagtttggaaatcca 16035537  T
Q  215 aaaacaaca 223  Q
    |||||||||    
T  16035536 aaaacaaca 16035528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 76 - 218
Target Start/End: Complemental strand, 3094187 - 3094045
Alignment:
Q  76 ggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataa 175  Q
    |||||||| |||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3094187 ggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataa 3094088  T
Q  176 tagaatttggaaatccaaatacaactgtttggaaatccaaaaa 218  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  3094087 tagaatttggaaatccaaatacaacagtttggaaatccaaaaa 3094045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 91 - 223
Target Start/End: Complemental strand, 25855229 - 25855097
Alignment:
Q  91 ttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatc 190  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  25855229 ttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatc 25855130  T
Q  191 caaatacaactgtttggaaatccaaaaacaaca 223  Q
    |||||||||| |||||||||| |||||||||||    
T  25855129 caaatacaacagtttggaaattcaaaaacaaca 25855097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 19 - 218
Target Start/End: Complemental strand, 38620822 - 38620624
Alignment:
Q  19 aatgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaa 118  Q
    |||||||||||||| || |||||||||||||| ||||||||||| |||||||||||| ||||||| |||| ||||||||||||||| || ||| ||||||    
T  38620822 aatgcagtagttaaccgcacagttgtagttggacttgttttatcttggaggcggcgtagttgatagtctgccttgcacaattttggacaatgc-acgaaa 38620724  T
Q  119 cgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaa 218  Q
    |||||||||||||| || ||||||| ||||||||||| ||| ||||||||| ||||||| |||||||||||||||||||||| ||||| |||| ||||||    
T  38620723 cgtcttaaagagagtgatctggtcgcgactcaacctaataataacttcggtagataataaaatttggaaatccaaatacaacagtttgaaaattcaaaaa 38620624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 21 - 223
Target Start/End: Complemental strand, 10140217 - 10140015
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| || ||||||| || ||||||||||||||||| |||| ||||||||||||  |||| |||||||||||||| | | ||||||||||||    
T  10140217 tgcagtagttaaccgcacagttgcagctgggcttgttttatcctagaggtggcgtggttgattgtctgccttgcacaattttgagtagtgccacgaaacg 10140118  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    | ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||  ||| |||||||||||||   |||||| ||| ||||||||    
T  10140117 tgttaaagagagcgacctgatcgtgactcaacctagtaacaacttcggtagataatagatcttgaaaatccaaatacagtagtttgggaatacaaaaaca 10140018  T
Q  221 aca 223  Q
    |||    
T  10140017 aca 10140015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 52 - 221
Target Start/End: Original strand, 18784547 - 18784716
Alignment:
Q  52 cttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaa 151  Q
    |||||||||| ||||||||||||||||||||| |||| ||||||||||||| |||| |||||||||| |||||||| ||||||||||| |||||||||||    
T  18784547 cttgttttattctggaggcggcgtggttgatagtctgccttgcacaattttaggcagtgccacgaaatgtcttaaa-agagcgacctgatcgtgactcaa 18784645  T
Q  152 cctagtaacaacttcggtggataatagaatttggaaatccaa-atacaactgtttggaaatccaaaaacaa 221  Q
    |||||||||||||||| | || |||||||||| |||| |||| ||||||| ||||||||||||||||||||    
T  18784646 cctagtaacaacttcgctagaaaatagaatttagaaaaccaacatacaacagtttggaaatccaaaaacaa 18784716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 20 - 166
Target Start/End: Complemental strand, 12260125 - 12259979
Alignment:
Q  20 atgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaac 119  Q
    ||||||||||||| || | |||||||  || | ||||||||||||  || |||||||||||||| ||||||||||||||||||||||| || ||||||||    
T  12260125 atgcagtagttaaccgcatagttgtacatgtgtttgttttatcctaaagacggcgtggttgatagtctgtcttgcacaattttgggcagtgtcacgaaac 12260026  T
Q  120 gtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttc 166  Q
    ||||||||||||||||| |||||||| ||||||| ||||||||||||    
T  12260025 gtcttaaagagagcgacatggtcgtgtctcaaccaagtaacaacttc 12259979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 112 - 223
Target Start/End: Complemental strand, 16832138 - 16832027
Alignment:
Q  112 cacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaat 211  Q
    |||| |||||||||||||||||||||||||||||||||||  ||||||||||||  || |||||||||||||||||||||||||||||| ||||||||||    
T  16832138 cacggaacgtcttaaagagagcgacctggtcgtgactcaatatagtaacaacttaagtagataatagaatttggaaatccaaatacaacggtttggaaat 16832039  T
Q  212 ccaaaaacaaca 223  Q
    ||||| ||||||    
T  16832038 ccaaatacaaca 16832027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 140 - 223
Target Start/End: Complemental strand, 25843821 - 25843738
Alignment:
Q  140 gtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 223  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  25843821 gtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaacagtttggaaattcaaaaacaaca 25843738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 52 - 174
Target Start/End: Complemental strand, 8900351 - 8900229
Alignment:
Q  52 cttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaa 151  Q
    ||||||||||||||||||||| ||| |||||| | ||| |||||||| ||| | || || ||| |||||| |||||||||||||  ||||||||||||||    
T  8900351 cttgttttatcctggaggcggtgtgattgatagtatgttttgcacaactttagacagtgtcacaaaacgttttaaagagagcgatatggtcgtgactcaa 8900252  T
Q  152 cctagtaacaacttcggtggata 174  Q
    |||||||||||||||||| ||||    
T  8900251 cctagtaacaacttcggtagata 8900229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 167
Target Start/End: Complemental strand, 11806487 - 11806341
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    ||||||| |||| || ||| |||||||||  ||| |||||| ||| ||||||||||||||||| |||| |||| || | |||| ||| || ||||||||     
T  11806487 tgcagtatttaaccgcacaattgtagttgaacttcttttattctgaaggcggcgtggttgatagtctgccttgtaccactttgcgcagtgtcacgaaaca 11806388  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcg 167  Q
    ||||||||||||||| ||||| ||||||||||||| |||||||||||    
T  11806387 tcttaaagagagcgatctggttgtgactcaacctaataacaacttcg 11806341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 53 - 159
Target Start/End: Original strand, 2493817 - 2493923
Alignment:
Q  53 ttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacct-ggtcgtgactcaa 151  Q
    |||||||||||||| |||| ||||||||||| | || |||||||||||||||||| |||||||||||||||||||||||||||||| | | | |||||||    
T  2493817 ttgttttatcctgggggcgccgtggttgatagtttg-cttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctagtttgcgactcaa 2493915  T
Q  152 cctagtaa 159  Q
    ||||||||    
T  2493916 cctagtaa 2493923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 53 - 153
Target Start/End: Complemental strand, 10106199 - 10106100
Alignment:
Q  53 ttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 152  Q
    |||||||||||||||| ||||||||||| || |||  ||||||||| || ||| | |||| |||||||||||||||||||||||||||||||||||||||    
T  10106199 ttgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaac 10106101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 54 - 138
Target Start/End: Complemental strand, 12906248 - 12906166
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacct 138  Q
    ||||||||||||| |||| ||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  12906248 tgttttatcctgg-ggcgtcgtggttgatagtctg-cttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacct 12906166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 54 - 153
Target Start/End: Complemental strand, 38734370 - 38734272
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    ||||||||||||||| ||||||||||| || |||  ||||||||| |  ||| | |||| ||||||||||||||||||||||||||||||||||||||||    
T  38734370 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacta-gggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacc 38734272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 21 - 119
Target Start/End: Complemental strand, 8138067 - 8137969
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaac 119  Q
    |||||||||||| || |||||||||| || |||||||||||||||||||||   ||||||||| |||| ||||||||| ||| |||| |||||||||||    
T  8138067 tgcagtagttaaccgcacagttgtagctgagcttgttttatcctggaggcgatatggttgatagtctgccttgcacaactttaggcaatgccacgaaac 8137969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 159
Target Start/End: Original strand, 27761839 - 27761944
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtc-gtgactcaac 152  Q
    ||||||||||||| | || ||||||||||| |||| ||||||||||||||| || ||||||||||||| |||||||||| ||||| ||| | ||||||||    
T  27761839 tgttttatcctggggacgtcgtggttgatagtctg-cttgcacaattttggacagtgccacgaaacgttttaaagagagtgacctagtctgcgactcaac 27761937  T
Q  153 ctagtaa 159  Q
    |||||||    
T  27761938 ctagtaa 27761944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 160
Target Start/End: Complemental strand, 5346773 - 5346652
Alignment:
Q  39 agttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacct 138  Q
    |||||||| ||  ||||||| ||| ||||||||||||| |||||| ||||| ||| |||| ||||| || |||||| |||||| ||||||||| ||||||    
T  5346773 agttgtagctgaacttgtttcatcttggaggcggcgtgattgatagtctgtattgtacaaatttggacagtgccacaaaacgttttaaagagaacgacct 5346674  T
Q  139 ggtcgtgactcaacctagtaac 160  Q
    | | || |||||||||||||||    
T  5346673 gattgtaactcaacctagtaac 5346652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 138
Target Start/End: Original strand, 33380905 - 33381004
Alignment:
Q  37 acagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgac 136  Q
    |||||||||| |||||| |||||||| ||| | || ||||||||||| |||| |||||||||||||| ||| || |||||||||||||||||||||||||    
T  33380905 acagttgtagctgggct-gttttatcttggggacgtcgtggttgatagtctg-cttgcacaattttgagcagtgtcacgaaacgtcttaaagagagcgac 33381002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 16833614 - 16833526
Alignment:
Q  19 aatgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggca 107  Q
    |||||||||||||||||||||||||||| || |  |||||||||||||| | |||| |||||||| | ||||||||| |||||||||||    
T  16833614 aatgcagtagttaatcgaacagttgtagctgaggctgttttatcctggatgtggcgaggttgatagtttgtcttgcataattttgggca 16833526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 153
Target Start/End: Complemental strand, 13890908 - 13890810
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    ||||||||||||||| ||| ||||||| || |||  ||||||||| || ||| | |||| | ||||||||||||||||||||||||||||||||||||||    
T  13890908 tgttttatcctggagacggtgtggttgttagtctaccttgcacaactt-gggtagtgccgcaaaacgtcttaaagagagcgacctggtcgtgactcaacc 13890810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 153
Target Start/End: Original strand, 39747165 - 39747263
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    ||||||||||||||| || |||||||| || |||  ||||||||| || ||| | |||| |||||||||||||||||||| |||||||||||||||||||    
T  39747165 tgttttatcctggagacgacgtggttgctagtctaccttgcacaactt-gggtagtgccgcgaaacgtcttaaagagagcaacctggtcgtgactcaacc 39747263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 25843884 - 25843822
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgata 83  Q
    |||||||||||| || |||||||||| |||||||||||||| |||||||||||||||||||||    
T  25843884 tgcagtagttaaccgcacagttgtagctgggcttgttttatactggaggcggcgtggttgata 25843822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 5725074 - 5724979
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||| ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  5725074 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 5724979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 150
Target Start/End: Original strand, 36684715 - 36684810
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||  ||  | |||| |||||||||||||||||||||||||||||||||||||    
T  36684715 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 36684810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 37 - 159
Target Start/End: Original strand, 24159783 - 24159904
Alignment:
Q  37 acagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgac 136  Q
    |||||||||| || ||| |||||||||||| | || ||| ||||||| |||| |||||||||||||||||| |   ||||||||||||||||||||||||    
T  24159783 acagttgtagctgagct-gttttatcctggggacgtcgtcgttgatagtctg-cttgcacaattttgggcagtattacgaaacgtcttaaagagagcgac 24159880  T
Q  137 ctggt-cgtgactcaacctagtaa 159  Q
    || || || |||||| ||||||||    
T  24159881 ctagtccgcgactcagcctagtaa 24159904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 153
Target Start/End: Original strand, 26651166 - 26651264
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    ||||||||||||||| ||||||||||| || |||  ||||||||| || ||| | |||| | |||| |||||||||||| ||||||||||||||||||||    
T  26651166 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgccgcaaaacatcttaaagagagtgacctggtcgtgactcaacc 26651264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 159
Target Start/End: Complemental strand, 36724803 - 36724698
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggt-cgtgactcaac 152  Q
    ||||||||| ||| |||| ||||||||||  |||| |||||||||||||||| | |||||  ||||||||||||||||||||||| || | ||||||| |    
T  36724803 tgttttatcttgggggcgtcgtggttgattgtctg-cttgcacaattttgggtagtgccataaaacgtcttaaagagagcgacctagtccatgactcagc 36724705  T
Q  153 ctagtaa 159  Q
    |||||||    
T  36724704 ctagtaa 36724698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 3584696 - 3584601
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||| ||   || || |||||||||||||||| ||||||||||||||||||||    
T  3584696 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtt-ccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 3584601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 150
Target Start/End: Original strand, 11251113 - 11251208
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  11251113 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 11251208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 150
Target Start/End: Original strand, 34318224 - 34318319
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||  ||  | |||| ||||||||||||||||||||||| |||||||||||||    
T  34318224 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacttggtcgtgactca 34318319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 150
Target Start/End: Original strand, 37404416 - 37404511
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  37404416 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 37404511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 54 - 153
Target Start/End: Original strand, 5602425 - 5602523
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    ||||||||| ||||| ||||||||||| || |||  ||||||||| |  ||| | |||  |||||||||||||||||||||| |||||||||||||||||    
T  5602425 tgttttatcttggagacggcgtggttgttagtctaccttgcacaacta-gggtagtgcagcgaaacgtcttaaagagagcgatctggtcgtgactcaacc 5602523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 159
Target Start/End: Original strand, 4632929 - 4633031
Alignment:
Q  57 tttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctag 156  Q
    |||||| |||||| | |||| ||||||| ||  ||||||||| || ||  | |||| | ||||||||||||||||||||| | |||||||||||||||||    
T  4632929 tttatcatggaggagtcgtgattgataacctaccttgcacaaattcggatagtgccgcaaaacgtcttaaagagagcgacatagtcgtgactcaacctag 4633028  T
Q  157 taa 159  Q
    |||    
T  4633029 taa 4633031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 138
Target Start/End: Original strand, 23193222 - 23193306
Alignment:
Q  53 ttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacct 138  Q
    |||||||||| ||| |||| ||||||||||| |||| |||||| |||||||||   ||||| ||||||||||| ||||||||||||    
T  23193222 ttgttttatcatgggggcgtcgtggttgatagtctg-cttgcataattttgggttgtgccatgaaacgtcttatagagagcgacct 23193306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 5730200 - 5730105
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||| | ||||| || |||  |||||||||||| ||   || || |||||||||||||||| ||||||||||||||||||||    
T  5730200 tgttttatcctggagacggtgcggttgctagtctaccttgcacaatttaggtagtt-ccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 5730105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 114
Target Start/End: Original strand, 25779288 - 25779376
Alignment:
Q  26 tagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccac 114  Q
    |||||||||| ||| |||| |||||  ||||||||||||| | | ||||||| ||||||| | |||||||||||||||| || ||||||    
T  25779288 tagttaatcgtacaattgtcgttggaattgttttatcctgaatgtggcgtggctgataatatttcttgcacaattttggacagtgccac 25779376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 150
Target Start/End: Original strand, 37409537 - 37409632
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||  ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  37409537 tgttttatcctggaaacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 37409632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 153
Target Start/End: Complemental strand, 14582194 - 14582096
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    ||||||||||||||| ||| ||||||| || |||  ||||||||| |  ||| | |||| |||||| ||||||||||||||||||| |||| ||||||||    
T  14582194 tgttttatcctggagacggtgtggttgttagtctaccttgcacaacta-gggtagtgccgcgaaacttcttaaagagagcgacctgatcgtaactcaacc 14582096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 8267891 - 8267929
Alignment:
Q  115 gaaacgtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  8267891 gaaacgtcttaaagaaagcgacctggtcgtgactcaacc 8267929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 159
Target Start/End: Original strand, 19422937 - 19422982
Alignment:
Q  114 cgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaa 159  Q
    |||||||||||||||||||||| ||| ||||||||||||| |||||    
T  19422937 cgaaacgtcttaaagagagcgatctgatcgtgactcaacccagtaa 19422982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 150
Target Start/End: Complemental strand, 27716484 - 27716443
Alignment:
Q  109 tgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    |||| |||||||||||||||| ||||||||||||||||||||    
T  27716484 tgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 27716443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 28434544 - 28434680
Alignment:
Q  24 agtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtct 123  Q
    |||||||||  | ||| |||||||||  ||||||||||||||||| ||||  |||||||| |||||  ||||||| ||| | || || || |||||||||    
T  28434544 agtagttaactgcacaattgtagttgaacttgttttatcctggagacggcaaggttgatagtctgtggtgcacaagttt-gacagtgtcatgaaacgtct 28434642  T
Q  124 taaagagagcgacctggtcgtgactcaacctagtaaca 161  Q
    |||| |||| | | || | || ||||||||||||||||    
T  28434643 taaaaagagtggcatgcttgtaactcaacctagtaaca 28434680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 223
Target Start/End: Complemental strand, 46696645 - 46696596
Alignment:
Q  174 aatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 223  Q
    ||||||||||||||||| ||||| ||| ||||| ||||||||||||||||    
T  46696645 aatagaatttggaaatctaaataaaacagtttgaaaatccaaaaacaaca 46696596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 138
Target Start/End: Complemental strand, 31064050 - 31063968
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacct 138  Q
    ||||||||||||| | || ||||||||||| | || |||| ||||||||||  | ||||||||||| ||||||||||||||||||    
T  31064050 tgttttatcctgg-gacgtcgtggttgatagtttg-cttgaacaattttggaaagtgccacgaaacctcttaaagagagcgacct 31063968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 28858065 - 28858126
Alignment:
Q  56 ttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaa 118  Q
    ||||||||||| | || ||||||||||| |||| |||||||||||||| ||| ||||||||||    
T  28858065 ttttatcctggggacgtcgtggttgatagtctg-cttgcacaattttgagcaatgccacgaaa 28858126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 109 - 150
Target Start/End: Original strand, 11387884 - 11387925
Alignment:
Q  109 tgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    |||| |||||||||||||| | ||||||||||||||||||||    
T  11387884 tgccgcgaaacgtcttaaaaaaagcgacctggtcgtgactca 11387925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 223
Target Start/End: Complemental strand, 12259959 - 12259911
Alignment:
Q  174 aatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 223  Q
    ||||||||| ||||||||||||| ||| || |||||||||||||||||||    
T  12259959 aatagaatt-ggaaatccaaatataacagtgtggaaatccaaaaacaaca 12259911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 25661858 - 25661899
Alignment:
Q  90 cttgcacaattttgggcattgccacgaaacgtcttaaagaga 131  Q
    |||||||||||||||| | |||||| ||||||||||||||||    
T  25661858 cttgcacaattttgggtagtgccacaaaacgtcttaaagaga 25661899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 138
Target Start/End: Complemental strand, 32987347 - 32987252
Alignment:
Q  41 ttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacct 138  Q
    |||||||||| || ||||| |||| | |||| | || |||||| |||| ||||||||||||| |||| |||||| |||| |||||||||||| |||||    
T  32987347 ttgtagttggact-gttttctcctaggggcgtcatgattgatagtctg-cttgcacaattttaggcagtgccacaaaacatcttaaagagagtgacct 32987252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 41098017 - 41098050
Alignment:
Q  120 gtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    |||||||||| |||||||||||||||||||||||    
T  41098017 gtcttaaagaaagcgacctggtcgtgactcaacc 41098050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 223
Target Start/End: Complemental strand, 8900206 - 8900162
Alignment:
Q  179 aatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 223  Q
    ||||||||||| ||||| |||| ||||| ||||||||||||||||    
T  8900206 aatttggaaattcaaatgcaacagtttgaaaatccaaaaacaaca 8900162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 222
Target Start/End: Original strand, 28434705 - 28434753
Alignment:
Q  174 aatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaac 222  Q
    ||||||||||| |||| |||||||||  ||||| |||||||||||||||    
T  28434705 aatagaatttgaaaattcaaatacaatagtttgaaaatccaaaaacaac 28434753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 21 - 223
Target Start/End: Original strand, 9854 - 10056
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||    
T  9854 tgcagtagttaatcgaacagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacg 9953  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9954 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 10053  T
Q  221 aca 223  Q
    |||    
T  10054 aca 10056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 179; Significance: 1e-96; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 21 - 223
Target Start/End: Original strand, 29167940 - 29168142
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||    
T  29167940 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacg 29168039  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  29168040 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaattcaaatacaacagtttggaaatccaaaaaca 29168139  T
Q  221 aca 223  Q
    |||    
T  29168140 aca 29168142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 21 - 223
Target Start/End: Complemental strand, 556823 - 556621
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||| |||||    
T  556823 tgcagtagttaatcgaacagttgtagctgagcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacaaaacg 556724  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  556723 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 556624  T
Q  221 aca 223  Q
    |||    
T  556623 aca 556621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 21 - 223
Target Start/End: Complemental strand, 561595 - 561393
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||| |||||    
T  561595 tgcagtagttaatcgaacagttgtagctgagcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacaaaacg 561496  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  561495 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 561396  T
Q  221 aca 223  Q
    |||    
T  561395 aca 561393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 23 - 223
Target Start/End: Complemental strand, 41996791 - 41996591
Alignment:
Q  23 cagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtc 122  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||    
T  41996791 cagtagttaaccgcacagttgtagttgggcttgttttatcctggaggcggcgtggttgatagtctgtcttacacaattttgggcagtgccacgaaacgtc 41996692  T
Q  123 ttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaac 222  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41996691 ttaaagagagcaacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaac 41996592  T
Q  223 a 223  Q
    |    
T  41996591 a 41996591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 23 - 223
Target Start/End: Complemental strand, 42001560 - 42001360
Alignment:
Q  23 cagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtc 122  Q
    |||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||    
T  42001560 cagtagttaaccgcacagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgtcttacacaattttgggcagtgccacgaaacgtc 42001461  T
Q  123 ttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaac 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42001460 ttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaac 42001361  T
Q  223 a 223  Q
    |    
T  42001360 a 42001360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 21 - 223
Target Start/End: Complemental strand, 12103153 - 12102950
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||    
T  12103153 tgcagtagttaatcgcacatttgtagttgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacg 12103054  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaattt-ggaaatccaaatacaactgtttggaaatccaaaaac 219  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  12103053 tcttaaagagagcgacctggtcgtaactcaacctagtaacaacttcggtagataatagaatttgggaaatccaaatacaacagtttggaaatccaaaaac 12102954  T
Q  220 aaca 223  Q
    ||||    
T  12102953 aaca 12102950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 21 - 223
Target Start/End: Complemental strand, 26667400 - 26667198
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    ||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||    
T  26667400 tgcagtagttaatcgaacagttgcagctggacttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacg 26667301  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||  ||||||||||| |||||||    
T  26667300 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaactccaaatacaatagtttggaaatctaaaaaca 26667201  T
Q  221 aca 223  Q
    |||    
T  26667200 aca 26667198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 21 - 223
Target Start/End: Complemental strand, 26938997 - 26938795
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    ||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||    
T  26938997 tgcagtagttaatcgaacagttgcagctggacttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacg 26938898  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||  ||||||||||| |||||||    
T  26938897 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaactccaaatacaatagtttggaaatctaaaaaca 26938798  T
Q  221 aca 223  Q
    |||    
T  26938797 aca 26938795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 21 - 218
Target Start/End: Complemental strand, 36428837 - 36428640
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| | || | |||||    
T  36428837 tgcagtagttaatcgaacagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagttccgcaaaacg 36428738  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaa 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||    
T  36428737 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcgttagataatagaatttggaaatccaaatacaacagtttggaaatccaaaaa 36428640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 21 - 223
Target Start/End: Original strand, 12501866 - 12502069
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||    
T  12501866 tgcagtagttaaccgaacagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgttttgcacaattttgggcagtgccacgaaacg 12501965  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatac-aactgtttggaaatccaaaaac 219  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||| ||||| ||||||||||||    
T  12501966 tcttaaagagagcgacctggtcatgactcaacctagtaacaacttcagtagataatagaatttggaaatccaaatacgaacagtttgaaaatccaaaaac 12502065  T
Q  220 aaca 223  Q
    ||||    
T  12502066 aaca 12502069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 21 - 200
Target Start/End: Original strand, 36942232 - 36942411
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||| ||||||    
T  36942232 tgcagtagttaatcgaacagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacg 36942331  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaac 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  36942332 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaaaacaac 36942411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 21 - 223
Target Start/End: Complemental strand, 39523177 - 39522974
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| || ||||||| || ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||    
T  39523177 tgcagtagttaaccgcacagttgcagctggacttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcggtgccacgaaacg 39523078  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatac-aactgtttggaaatccaaaaac 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  39523077 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcgatagataatagaatttggaaatccaaatactaacagtttggaaatccaaaaac 39522978  T
Q  220 aaca 223  Q
    ||||    
T  39522977 aaca 39522974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 21 - 223
Target Start/End: Original strand, 6155386 - 6155588
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||| | |||||||| || ||||||||||||    
T  6155386 tgcagtagttaatcgaacagttgtagctgggcttgttttatcctggaggcggtgtggttgatagtctgtcttgtaaaattttggacagtgccacgaaacg 6155485  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||| |||||| ||    
T  6155486 tcttaaagagagcgacctgatcgtgactcaacctagtaacaatttcggtagataatagaatttggaaatccaaatacaacagtttggaaaaccaaaatca 6155585  T
Q  221 aca 223  Q
    |||    
T  6155586 aca 6155588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 21 - 223
Target Start/End: Complemental strand, 39518538 - 39518336
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| || ||||||| || ||| |||||||||||||||||||||||||||||||| |||| | |||||||||||||||  ||||||||||||    
T  39518538 tgcagtagttaaccgcacagttgcagctggacttgttttatcctggaggcggcgtggttgatagtctgccatgcacaattttgggcggtgccacgaaacg 39518439  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  39518438 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcgatagataatagaatttggaaatccaaatacaacagtttggaaatccaaaaaca 39518339  T
Q  221 aca 223  Q
    |||    
T  39518338 aca 39518336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 21 - 223
Target Start/End: Original strand, 12045106 - 12045309
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| || |||||||||| |  |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||    
T  12045106 tgcagtagttaaccgcacagttgtagctatgcttgttttatcctggaggcggcgtggtcgatagtctgtcttgcacaattttgggcagtgccacgaaacg 12045205  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatcc-aaatacaactgtttggaaatccaaaaac 219  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||||| ||||||||||||||||||    
T  12045206 tcttaaagagggcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaaaccaaaatacaacagtttggaaatccaaaaac 12045305  T
Q  220 aaca 223  Q
    ||||    
T  12045306 aaca 12045309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 21 - 200
Target Start/End: Original strand, 36937478 - 36937657
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||| ||||||    
T  36937478 tgcagtagttaatcgaacagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacg 36937577  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaac 200  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||    
T  36937578 tcttaaagagagcgacctggtcgtgactcaacctaataacaacttcggtagataatagaatttggaaatccaaaaacaac 36937657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 37 - 226
Target Start/End: Original strand, 37248778 - 37248967
Alignment:
Q  37 acagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgac 136  Q
    ||||||| || |||||||||||||||||||||||||||||||||||| |||| ||||||||||||| || | |||||||||| |||||||||||||||||    
T  37248778 acagttgcagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttaggtagtgccacgaaatgtcttaaagagagcgac 37248877  T
Q  137 ctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaacagaa 226  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  37248878 ctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatataacagtttggaaatccaaaaacaacagaa 37248967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 21 - 221
Target Start/End: Complemental strand, 36423765 - 36423565
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||| ||||||||| |||||| |||| |||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||| |||| |||||||    
T  36423765 tgcattagttaatcaaacagtagtagctgggcttgttttattctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccgcgaaacg 36423666  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||| |||||||||||||    
T  36423665 tcttaaagagagcgacctggtcgcgactcaacctagtaacaacttcggtagataatagattttggaaatccaaatacaacagtttgaaaatccaaaaaca 36423566  T
Q  221 a 221  Q
    |    
T  36423565 a 36423565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 24 - 223
Target Start/End: Complemental strand, 7451883 - 7451684
Alignment:
Q  24 agtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtct 123  Q
    ||||||||| || ||||||| || || |||||||||||||||||||| |||||||||||| |||| ||||||||||||||| || |||||||||||||||    
T  7451883 agtagttaaccgcacagttgcagctgagcttgttttatcctggaggcagcgtggttgatagtctgccttgcacaattttggacagtgccacgaaacgtct 7451784  T
Q  124 taaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||| ||||| ||||||||||||||||    
T  7451783 taaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttgaaaattcaaatacaacagtttgaaaatccaaaaacaaca 7451684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 21 - 223
Target Start/End: Original strand, 41587127 - 41587329
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| || |||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||  || || |||||||||    
T  41587127 tgcagtagttaaccgcacagttgtagctgagcttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgaacagtgtcacgaaacg 41587226  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||| |||| |||||||||| |||| ||||||||||||||    
T  41587227 tcttaaagagagcaacctggtcgtgactcaaactagtaacaacttcggtagataatagaatttgaaaattcaaatacaacagtttagaaatccaaaaaca 41587326  T
Q  221 aca 223  Q
    |||    
T  41587327 aca 41587329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 21 - 224
Target Start/End: Complemental strand, 3666060 - 3665856
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| || |||||||||||||| ||||||||||||| |||| ||||||||||||| |||| |||||||||||||||||| ||||||||||||    
T  3666060 tgcagtagttaaccgcacagttgtagttggacttgttttatcctagaggtggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacg 3665961  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatcc-aaatacaactgtttggaaatccaaaaac 219  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  3665960 tcttgaagagagcgacctagtcgtgactcaacctagtaacaacttcggtagaaaatagaatttgaaaaaccaaaatacaacagtttggaaatccaaaaac 3665861  T
Q  220 aacag 224  Q
    |||||    
T  3665860 aacag 3665856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 26 - 223
Target Start/End: Original strand, 10759792 - 10759992
Alignment:
Q  26 tagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtctta 125  Q
    ||||||| || |||||||||  |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||| ||||||||||    
T  10759792 tagttaaccgcacagttgtaaatgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacaaaacgtctta 10759891  T
Q  126 aagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataata----gaatttggaaatccaaatacaactgtttggaaatccaaaaacaa 221  Q
    || ||||||||||||||||||||||||||||||||||||||||| |||||||    ||||||||||||||||||||||| ||||||||||||||||||||    
T  10759892 aa-agagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatgaatttggaaatccaaatacaacagtttggaaatccaaaaacaa 10759990  T
Q  222 ca 223  Q
    ||    
T  10759991 ca 10759992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 19 - 223
Target Start/End: Original strand, 6514566 - 6514769
Alignment:
Q  19 aatgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaa 118  Q
    |||||||||||||| |  |||||||||| |  ||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||| ||||||||||    
T  6514566 aatgcagtagttaaccacacagttgtagctaagcttgttttatcctggaggcggcgtggttgatagtctgccttgcaaaattttgggcagtgccacgaaa 6514665  T
Q  119 cgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaa 218  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||  |||| ||||||    
T  6514666 cgtcttaaagagagtgacttggtcgtgactcaacctagtaacaactttggtagataatagaatttggaaatccaaatacaacagttttaaaat-caaaaa 6514764  T
Q  219 caaca 223  Q
    |||||    
T  6514765 caaca 6514769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 51 - 223
Target Start/End: Original strand, 37652827 - 37652999
Alignment:
Q  51 gcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||||||| ||||||||||||| |||| ||||||||||||||| || || |||||||||||||||||||||||||||| ||||||||||    
T  37652827 gcttgttttatcctggaggtggcgtggttgatagtctgccttgcacaattttggacaatgtcacgaaacgtcttaaagagagcgacctgatcgtgactca 37652926  T
Q  151 acctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 223  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  37652927 acctaataacaacttcggtagataatagaatttggaaatccaaatacaacaatttggaaatccaaaaacaaca 37652999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 24 - 216
Target Start/End: Complemental strand, 40148020 - 40147828
Alignment:
Q  24 agtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtct 123  Q
    |||||||||| ||||| ||| || || |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||    
T  40148020 agtagttaattgaacaattgaagctgagcttattttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacatct 40147921  T
Q  124 taaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaa 216  Q
    |||||||||||||||| || |||||||||||| ||||||||||| | |||||||||||||||||||||||||||||  |||||||||| ||||    
T  40147920 taaagagagcgacctgatcatgactcaacctaataacaacttcgatagataatagaatttggaaatccaaatacaatagtttggaaattcaaa 40147828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 21 - 218
Target Start/End: Original strand, 11981247 - 11981443
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||| ||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||| |||||| |||||    
T  11981247 tgcaatagttaatcgaacagttgtagatgtgcttgttttattctggaggcggcgtggttgat--tctgtcttgcacaattttgggcagtgccacaaaacg 11981344  T
Q  121 tcttaaagagagcgacctggtcgtgac-tcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaa 218  Q
    ||||||||| |||||||||||| | |  |||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||| |||||||||||    
T  11981345 tcttaaagaaagcgacctggtcataaaatcaacctagtaacaacttcggtagataatagaatttggaaatccaactacaacagtttgaaaatccaaaaa 11981443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 21 - 223
Target Start/End: Original strand, 20181030 - 20181233
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| || ||| ||||||||| |||||||||||| |||||| ||||||||| ||| ||||||||||| |||||||| || ||||||||||||    
T  20181030 tgcagtagttaaccgcacaattgtagttgagcttgttttatcatggaggtggcgtggttaatagtctgtcttgcataattttggacaatgccacgaaacg 20181129  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgttt-ggaaatccaaaaac 219  Q
    |||||||||||| |||||||||||||||||||||| |||||| ||| || |||||||||||||||||||||||||||||| ||||   ||||||||||||    
T  20181130 tcttaaagagagtgacctggtcgtgactcaacctaataacaatttcagtagataatagaatttggaaatccaaatacaacggtttaaaaaatccaaaaac 20181229  T
Q  220 aaca 223  Q
    ||||    
T  20181230 aaca 20181233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 21 - 223
Target Start/End: Original strand, 12041899 - 12042101
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| | || |||||| | ||||||||| ||||||||||||    
T  12041899 tgcagtagttaatcgaacagttgtagctggacttgttttatcctggaggcggcgtggttgatagtttgccttgcatatttttgggcagtgccacgaaacg 12041998  T
Q  121 tcttaaagagagcgacctggtcgtgactca--acctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaa 218  Q
    ||||||||||| ||||||||||||||||||  |||||||||||||||| || ||||| | |||||| ||||||||||  ||| ||||| |||||||||||    
T  12041999 tcttaaagagaacgacctggtcgtgactcatgacctagtaacaacttcagtagataacataatttgaaaatccaaat--aacagtttgaaaatccaaaaa 12042096  T
Q  219 caaca 223  Q
    |||||    
T  12042097 caaca 12042101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 37 - 223
Target Start/End: Original strand, 35679858 - 35680047
Alignment:
Q  37 acagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgac 136  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| | || ||||||||||||||||||||||||||||    
T  35679858 acagttgtagttgagcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaatttttgacagtgccacgaaacgtcttaaagagagcgac 35679957  T
Q  137 ctggtcgtgactcaacctagtaacaacttcggtggataata----gaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 223  Q
    || | | |||||||||||||||||| ||||||| |||||||    |||||||||||||||||||||||  |||| ||||||||||||||||    
T  35679958 ct-gccatgactcaacctagtaacagcttcggtagataatataatgaatttggaaatccaaatacaacaatttgaaaatccaaaaacaaca 35680047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 21 - 219
Target Start/End: Original strand, 32461516 - 32461702
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| || ||||||| || ||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||    
T  32461516 tgcagtagttaaccgcacagttgcagctgaacttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacaaaacg 32461615  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaac 219  Q
    ||||||||||||||||||||||||||||||||         |||||||| ||||||||||||| |||||||||||||||   |||||||||||||||||    
T  32461616 tcttaaagagagcgacctggtcgtgactcaac---------acttcggtagataatagaatttagaaatccaaatacaa---tttggaaatccaaaaac 32461702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 24 - 169
Target Start/End: Original strand, 12102801 - 12102946
Alignment:
Q  24 agtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtct 123  Q
    ||||||||| || |||||||||||||| ||||||||||||||| | ||| |||||||||| |||  ||||||||||||||| || |||||| ||| ||||    
T  12102801 agtagttaaccgcacagttgtagttggtcttgttttatcctggtgacggtgtggttgatagtcttccttgcacaattttggccagtgccacaaaaagtct 12102900  T
Q  124 taaagagagcgacctggtcgtgactcaacctagtaacaacttcggt 169  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  12102901 taaagagagcgacctagtcgtgactcaacctagtaacaacttcggt 12102946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 21 - 167
Target Start/End: Original strand, 16116216 - 16116362
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    ||||||||||||  | || ||||||||||  |||||||||||  ||||| ||||||||||||| | ||||||||||||||||||||| || |||||||||    
T  16116216 tgcagtagttaacagtactgttgtagttgaacttgttttatctaggaggtggcgtggttgatagtttgtcttgcacaattttgggcagtgtcacgaaacg 16116315  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcg 167  Q
    | |||| |||||| |||| ||||||||| ||||||| ||||||||||    
T  16116316 ttttaaggagagcaacctagtcgtgacttaacctagcaacaacttcg 16116362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 58 - 166
Target Start/End: Original strand, 15414885 - 15414993
Alignment:
Q  58 ttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagt 157  Q
    |||||||||||||||||||||||||| |||| ||  |||||||||||||| |||||| ||||| |||||||||||||  || |||||||||||||| |||    
T  15414885 ttatcctggaggcggcgtggttgatattctgcctcacacaattttgggcagtgccacaaaacgacttaaagagagcgttctagtcgtgactcaaccaagt 15414984  T
Q  158 aacaacttc 166  Q
    |||||||||    
T  15414985 aacaacttc 15414993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 141 - 223
Target Start/End: Original strand, 37550089 - 37550170
Alignment:
Q  141 tcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 223  Q
    ||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||  |||| ||||||||||||||||    
T  37550089 tcgtgactcaacctaata-caacttcggtagataatagaatttggaaatccaaatacaacaatttgaaaatccaaaaacaaca 37550170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 4872048 - 4871987
Alignment:
Q  23 cagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataa 84  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  4872048 cagtagttaatcgaacagttgtagttgagcttgttttatcatggaggcggcgtggttgataa 4871987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 54 - 150
Target Start/End: Original strand, 13582690 - 13582785
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||||||||| || |||  ||||||||| || ||| | |||| |||||||||||||||||||||||||||||||||||||    
T  13582690 tgttttatcctggagacggcgtggttgttagtctaccttgcacaaatt-gggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 13582785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 54 - 150
Target Start/End: Original strand, 24435869 - 24435964
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| |||||||||||||| |||  ||||||||| || ||  | |||| |||||||||||||||||||||||||||||||||||||    
T  24435869 tgttttatcctggagacggcgtggttgatagtctaccttgcacaactt-ggatagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 24435964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 54 - 153
Target Start/End: Complemental strand, 7805166 - 7805068
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    ||||||||||||||| ||||||||||| || |||  ||||||||| || ||| | |||| ||||||||||||||||||| ||||||||||||||||||||    
T  7805166 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgccgcgaaacgtcttaaagagagggacctggtcgtgactcaacc 7805068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 54 - 153
Target Start/End: Complemental strand, 14374230 - 14374132
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    ||||||||||||||| ||||||||||| || |||  | ||||||| || ||| | |||| ||||||||||||||||||||||||||||||||||||||||    
T  14374230 tgttttatcctggagacggcgtggttgttagtctaccctgcacaactt-gggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacc 14374132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 36253921 - 36253826
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||||||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  36253921 tgttttatcctggaggcggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 36253826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 174
Target Start/End: Complemental strand, 9911280 - 9911128
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    ||||||| |||| || ||| |||||||||  ||||||||||| | ||| ||||||| ||| || |||| |  |||||||||||  || |||||| ||| |    
T  9911280 tgcagtaattaaccgcacaattgtagttgaacttgttttatcttagag-cggcgtgattggtagtctgccccgcacaattttgaacagtgccacaaaatg 9911182  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggata 174  Q
    ||||||| ||| |||| | ||| | |||||||||||||||||||||||| ||||    
T  9911181 tcttaaaaagaacgacattgtcctaactcaacctagtaacaacttcggtagata 9911128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 51 - 104
Target Start/End: Original strand, 37550029 - 37550082
Alignment:
Q  51 gcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgg 104  Q
    ||||||||||||||||||| ||||||||||||| |||| |||||||||||||||    
T  37550029 gcttgttttatcctggaggtggcgtggttgatagtctgccttgcacaattttgg 37550082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 17510153 - 17510058
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  17510153 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 17510058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 154
Target Start/End: Original strand, 13301454 - 13301585
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    ||||||| |||||||||||| || | | ||||| ||||||||||||||||  |  ||||| || |||  |||||||||||||||| | ||||  ||   |    
T  13301454 tgcagtatttaatcgaacaggtgaactggggct-gttttatcctggaggca-cacggttgttagtctaccttgcacaattttgggtagtgccgtgatttg 13301551  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacct 154  Q
    ||||||||| ||||||||||||||||||||||||    
T  13301552 tcttaaagaaagcgacctggtcgtgactcaacct 13301585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 138
Target Start/End: Original strand, 18265489 - 18265588
Alignment:
Q  37 acagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgac 136  Q
    |||||||||| || ||| |||||||| ||| | || ||||||||||| ||||  |||||||||||| |||| || ||| |||||||||||||||||||||    
T  18265489 acagttgtagctgagct-gttttatcatggggacgtcgtggttgatagtctga-ttgcacaattttaggcagtgtcacaaaacgtcttaaagagagcgac 18265586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 24771356 - 24771452
Alignment:
Q  53 ttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    |||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||| ||||||||| ||||||||||||||||||||    
T  24771356 ttgttttatcctggagacggcgcggttgttagtctaccttgcacaacttaggt-agtgccgcgaaacatcttaaagaaagcgacctggtcgtgactca 24771452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 221
Target Start/End: Original strand, 12104205 - 12104249
Alignment:
Q  177 agaatttggaaatccaaatacaactgtttggaaatccaaaaacaa 221  Q
    |||||||| |||||||||||||||||||||||||| |||||||||    
T  12104205 agaatttgaaaatccaaatacaactgtttggaaatacaaaaacaa 12104249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 42019668 - 42019573
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||  ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  42019668 tgttttatcctggagacggcacggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 42019573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 159
Target Start/End: Original strand, 1414050 - 1414155
Alignment:
Q  53 ttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 152  Q
    |||||||||| ||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||| |||||||||| |    
T  1414050 ttgttttatcttggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctgatcgtgactcacc 1414148  T
Q  153 ctagtaa 159  Q
    | |||||    
T  1414149 ccagtaa 1414155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 150
Target Start/End: Complemental strand, 26709143 - 26709102
Alignment:
Q  109 tgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    |||| |||||||||||||||| ||||||||||||||||||||    
T  26709143 tgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 26709102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 150
Target Start/End: Complemental strand, 26978877 - 26978836
Alignment:
Q  109 tgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    |||| |||||||||||||||| ||||||||||||||||||||    
T  26978877 tgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 26978836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 17505048 - 17504953
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| || || ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| | ||||||||||||||||||    
T  17505048 tgttttatcctggagacgacgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaaacgacctggtcgtgactca 17504953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 150
Target Start/End: Complemental strand, 41853584 - 41853548
Alignment:
Q  114 cgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    |||||||||||||||| ||||||||||||||||||||    
T  41853584 cgaaacgtcttaaagaaagcgacctggtcgtgactca 41853548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 159
Target Start/End: Original strand, 24776869 - 24776919
Alignment:
Q  109 tgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaa 159  Q
    |||| |||||||||||||||| |||||| ||||||||||||| || |||||    
T  24776869 tgccgcgaaacgtcttaaagaaagcgacatggtcgtgactcaccccagtaa 24776919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 53 - 134
Target Start/End: Original strand, 1286265 - 1286344
Alignment:
Q  53 ttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcg 134  Q
    |||||||||| ||||| || ||||||| |||||||   |||||||||||| |||| |||||| ||| |||||||||||||||    
T  1286265 ttgttttatcatggagacgtcgtggttaataatctag-ttgcacaattttcggcaatgccac-aaatgtcttaaagagagcg 1286344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 219
Target Start/End: Complemental strand, 9496759 - 9496714
Alignment:
Q  174 aatagaatttggaaatccaaatacaactgtttggaaatccaaaaac 219  Q
    ||||||||||| |||| |||||| ||| ||||||||||||||||||    
T  9496759 aatagaatttgaaaattcaaatataacggtttggaaatccaaaaac 9496714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 31731573 - 31731540
Alignment:
Q  120 gtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    |||||||||| |||||||||||||||||||||||    
T  31731573 gtcttaaagaaagcgacctggtcgtgactcaacc 31731540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 177; Significance: 2e-95; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 21 - 225
Target Start/End: Complemental strand, 4202 - 3998
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| |    
T  4202 tgcagtagttaatcgaacagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaatg 4103  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  4102 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaacagtttggaaatccaaaaaca 4003  T
Q  221 acaga 225  Q
    |||||    
T  4002 acaga 3998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 26 - 223
Target Start/End: Original strand, 443917 - 444101
Alignment:
Q  26 tagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtctta 125  Q
    ||||||| || |||||||||| ||||||||||||||||| ||| |||||||||||||| |||| ||||||||||||| |||| |||||||||||||        
T  443917 tagttaaccgcacagttgtagctgggcttgttttatcct-gagacggcgtggttgatagtctgccttgcacaatttt-ggcagtgccacgaaacgt---- 444010  T
Q  126 aagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 223  Q
           |||| | ||||||| ||||||||||||||||||||||  ||||||||||||| |||| |||||||||  ||||  ||||||||||||||||    
T  444011 -------cgacttcgtcgtgattcaacctagtaacaacttcggtaaataatagaatttgaaaatacaaatacaagagtttaaaaatccaaaaacaaca 444101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 176; Significance: 6e-95; HSPs: 73)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 21 - 228
Target Start/End: Complemental strand, 3672712 - 3672505
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||| ||||||    
T  3672712 tgcagtagttaatcgaacagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacg 3672613  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  3672612 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaacagtttggaaatccaaaaaca 3672513  T
Q  221 acagaact 228  Q
    ||| ||||    
T  3672512 acaaaact 3672505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 21 - 223
Target Start/End: Complemental strand, 3692744 - 3692542
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||| ||||||    
T  3692744 tgcagtagttaatcgaacagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacg 3692645  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  3692644 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaacagtttggaaatccaaaaaca 3692545  T
Q  221 aca 223  Q
    |||    
T  3692544 aca 3692542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 21 - 225
Target Start/End: Original strand, 39775695 - 39775899
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||    
T  39775695 tgcagtagttaatcgaacagttgtagctgagcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacg 39775794  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  39775795 tcttaaagagagcgacctggtcgtgactcaacctagtagcaacttcggtagataatagaatttggaaatccaaatacaacagtttggaaatccaaaaaca 39775894  T
Q  221 acaga 225  Q
    |||||    
T  39775895 acaga 39775899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 21 - 223
Target Start/End: Original strand, 7571185 - 7571387
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| || |||||||||| || |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||    
T  7571185 tgcagtagttaaccgcacagttgtagctgagcttgttttatcctggaggcggcgtgattgatagtctgtcttgcacaattttgggcagtgccacgaaacg 7571284  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  7571285 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaacagtttggaaatccaaaaaca 7571384  T
Q  221 aca 223  Q
    |||    
T  7571385 aca 7571387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 21 - 223
Target Start/End: Complemental strand, 18467351 - 18467149
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||| |||| |||||||||||||||||| ||||||||||||    
T  18467351 tgcagtagttaatcgaacaattgtagttggacttgttttatcctggaggcggcgtggttaatagtctgccttgcacaattttgggcagtgccacgaaacg 18467252  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| | |||||||||| ||||||||    
T  18467251 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttgaaaatccaaatacatcagtttggaaattcaaaaaca 18467152  T
Q  221 aca 223  Q
    |||    
T  18467151 aca 18467149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 21 - 223
Target Start/End: Original strand, 23666090 - 23666292
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||| ||||||| || ||||||| || |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||    
T  23666090 tgcattagttaaccgcacagttgcagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacg 23666189  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  23666190 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaacagtttggaaattcaaaaaca 23666289  T
Q  221 aca 223  Q
    |||    
T  23666290 aca 23666292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 21 - 223
Target Start/End: Original strand, 24038338 - 24038540
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||| ||||||| || ||||||| || |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||    
T  24038338 tgcattagttaaccgcacagttgcagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacg 24038437  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  24038438 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaacagtttggaaattcaaaaaca 24038537  T
Q  221 aca 223  Q
    |||    
T  24038538 aca 24038540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 21 - 223
Target Start/End: Complemental strand, 8069805 - 8069603
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| || ||||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || ||||||||||||    
T  8069805 tgcagtagttaaccgcacagttgcagctgggcttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattt-ggacagtgccacgaaacg 8069707  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggat-aatagaatttggaaatccaaatacaactgtttggaaatccaaaaac 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  8069706 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataaatagaatttggaaatccaaatacaactgtttggaaatccaaaaac 8069607  T
Q  220 aaca 223  Q
    ||||    
T  8069606 aaca 8069603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 21 - 223
Target Start/End: Complemental strand, 8883296 - 8883094
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| || ||||||| || ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  8883296 tgcagtagttaaccgcacagttgcagctgggcttgttttatcctggaggcagcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacg 8883197  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||| ||    
T  8883196 tcttaaagagagcgacctggtcgtgactcgacctagtaacaacttcggtagataatagaatttgaaaatccaaatacaacagtttggaaatccaaaatca 8883097  T
Q  221 aca 223  Q
    |||    
T  8883096 aca 8883094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 21 - 218
Target Start/End: Original strand, 758335 - 758532
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| || ||||||| || |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| | ||||||||||||    
T  758335 tgcagtagttaaccgcacagttgcagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggtagtgccacgaaacg 758434  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaa 218  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  758435 tcttaaagagagcgatctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaacagtttggaaatccaaaaa 758532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 21 - 218
Target Start/End: Complemental strand, 3033770 - 3033573
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||||||||||||||||| || |||||||||||||| ||||||| |||||||||| |||| |||||||||||||||||| ||||| ||||||    
T  3033770 tgcagtagttaatcgaacagttgtagctgagcttgttttatccttgaggcggtgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacg 3033671  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaa 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||||||||    
T  3033670 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatactacagtttggaaatccaaaaa 3033573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 19 - 223
Target Start/End: Complemental strand, 18472135 - 18471932
Alignment:
Q  19 aatgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaa 118  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||| |||| |||||||||     
T  18472135 aatgcagtagttaatcgaacagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttaggcagtgccacgaa- 18472037  T
Q  119 cgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaa 218  Q
    | || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||| ||||| ||||||    
T  18472036 catcgtaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacatcagtttagaaattcaaaaa 18471937  T
Q  219 caaca 223  Q
    |||||    
T  18471936 caaca 18471932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 21 - 223
Target Start/End: Original strand, 14438662 - 14438864
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| || ||||||| || |||||||||||||||||||||||||||||||||||  |||| |||||||||||||||| | ||||||||||||    
T  14438662 tgcagtagttaaccgcacagttgcagctgggcttgttttatcctggaggcggcgtggttgattgtctgccttgcacaattttgggtagtgccacgaaacg 14438761  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||| ||||||||||||    
T  14438762 tcttaaagagggcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaacttggaaatccaaatacaacagtttgggaatccaaaaaca 14438861  T
Q  221 aca 223  Q
    |||    
T  14438862 aca 14438864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 20 - 223
Target Start/End: Complemental strand, 3419122 - 3418918
Alignment:
Q  20 atgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaac 119  Q
    ||||| ||||||| || ||||||| ||||| ||||||||||||||| ||| ||||||||||||| |||| |||||||||||||||||| |||||||||||    
T  3419122 atgcaatagttaaccgcacagttgcagttgagcttgttttatcctgaaggtggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaac 3419023  T
Q  120 gtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaat-ccaaaaa 218  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||    
T  3419022 gtcttaaagagagcgacttggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaacagtttggaaataccaaaaa 3418923  T
Q  219 caaca 223  Q
    |||||    
T  3418922 caaca 3418918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 24 - 223
Target Start/End: Complemental strand, 8888053 - 8887854
Alignment:
Q  24 agtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtct 123  Q
    ||||||||| || ||||||| || |||  |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| || ||||||||    
T  8888053 agtagttaaccgcacagttgcagctggatttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttggacagtgcaacaaaacgtct 8887954  T
Q  124 taaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||| |||||    
T  8887953 taaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaattcaaatacaacagtttggaaatccaaaatcaaca 8887854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 37 - 224
Target Start/End: Complemental strand, 29350350 - 29350163
Alignment:
Q  37 acagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgac 136  Q
    ||||||||||||| ||||||||||||||||||||||| |||| |||  |||| |||||||||||||||||| ||||||||||||||||||||| ||||||    
T  29350350 acagttgtagttgagcttgttttatcctggaggcggcatggtagatggtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagaaagcgac 29350251  T
Q  137 ctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaacag 224  Q
     |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  29350250 atggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaacagtttggaaatccaaaaacaacag 29350163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 21 - 221
Target Start/End: Original strand, 12965840 - 12966040
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||  |||||    
T  12965840 tgcattagttaatcgaacaattgtagttggacttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccataaaacg 12965939  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||| ||| |||||||||||||| ||||||||||| ||||| |||| ||||||||    
T  12965940 tcttaaagagagcgacctggttgtgactcaatctagtaacaacttcggtagatcatagaatttggaaacccaaatacaacggtttgaaaattcaaaaaca 12966039  T
Q  221 a 221  Q
    |    
T  12966040 a 12966040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 21 - 200
Target Start/End: Original strand, 32474647 - 32474824
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  32474647 tgcagtagttaatcgaacagttgtagctgggcttgttttatcctggagacggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacg 32474746  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaac 200  Q
    ||||  ||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||| |||||    
T  32474747 tctt--agagagcgacctggtcgtggctcaatctagtaacaacttcggtagataatagaatttggaaatccaaaaacaac 32474824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 21 - 220
Target Start/End: Complemental strand, 55431441 - 55431242
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| || |||||||||| ||| |||||||||||||||||||||||||||||||| |||| |||||| |||||| | || || |||||||||    
T  55431441 tgcagtagttaaccgcacagttgtagctggacttgttttatcctggaggcggcgtggttgatagtctgccttgcataatttttgacagtgtcacgaaacg 55431342  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55431341 tcttaaagagagcgacctgatcgtgactcaacctaataacaacttcagcagataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 55431242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 23 - 223
Target Start/End: Complemental strand, 20520178 - 20519978
Alignment:
Q  23 cagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtc 122  Q
    |||||||||| || |||||||||| ||| ||||||||||| |||||||||||||||||||| |||  |||||||||| ||||||| ||||||||||||||    
T  20520178 cagtagttaaccgcacagttgtagctggacttgttttatcttggaggcggcgtggttgatagtctcccttgcacaatcttgggcagtgccacgaaacgtc 20520079  T
Q  123 ttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaac 222  Q
    |||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||| |||| | ||||||||    
T  20520078 ttaaagagagtgacctggtcgtgactcaacctagtaacaacttcgctagataatagaatttggaaatccaaatacaacagtttgaaaattcgaaaacaac 20519979  T
Q  223 a 223  Q
    |    
T  20519978 a 20519978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 24 - 227
Target Start/End: Original strand, 49971394 - 49971597
Alignment:
Q  24 agtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtct 123  Q
    |||||||||  | ||||||| || ||| ||||||||||||||||||||||||| |||||| |||| |||||||||||||||  | |||||||||||||||    
T  49971394 agtagttaactgcacagttgcagctggacttgttttatcctggaggcggcgtgattgatagtctgccttgcacaattttggatagtgccacgaaacgtct 49971493  T
Q  124 taaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 223  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||||| |||||||||||||||||||| |    
T  49971494 taaagagatcgacctggtcgtgactcaacctagtaacaacttcggtagataataaaacttggaaatccaaatacaacagtttggaaatccaaaaacaaga 49971593  T
Q  224 gaac 227  Q
    ||||    
T  49971594 gaac 49971597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 12971598 - 12971746
Alignment:
Q  19 aatgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaa 118  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  12971598 aatgcagtagttaattgaacagttgtagttgggcttgttttatcctagaggcggcgtgattgataatctgtcttgcacaattttgggcaatgccacgaaa 12971697  T
Q  119 cgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcg 167  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  12971698 cgtcttaaagagagagacctggtcgtgagtcaacctagtaacaacttcg 12971746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 21 - 223
Target Start/End: Original strand, 3657207 - 3657409
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||||| ||||||||||| ||| ||||||||||| |||||| ||| ||||||||| |||||||||||||||||||  || ||||||||||||    
T  3657207 tgcagtagttaatctaacagttgtagctggacttgttttatcttggaggtggcatggttgatagtctgtcttgcacaattttgaacagtgccacgaaacg 3657306  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||||||||||| ||  |||||||||||| |||||||||||||||| ||||||||||||| ||||| |||||||||| ||||| ||||||||| |||    
T  3657307 tcttaaagagagcgatctaatcgtgactcaacatagtaacaacttcggtagataatagaatttagaaattcaaatacaacagtttgaaaatccaaacaca 3657406  T
Q  221 aca 223  Q
    |||    
T  3657407 aca 3657409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 21 - 221
Target Start/End: Complemental strand, 29715770 - 29715570
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||| ||||||| || |||| ||||| ||| ||||||||||||| |||||||||||||||||| |||  || |||||||||||| || || |||||||||    
T  29715770 tgcaatagttaaccgcacagctgtagctggacttgttttatcctagaggcggcgtggttgatagtcttcctagcacaattttggacagtgtcacgaaacg 29715671  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||| ||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  29715670 tcttaaaaagagcgatctggtcgtgactcaacctaataacaacttcggtagataatagaatttggaaatctaaatacaacagtttggaaatccaaaaaca 29715571  T
Q  221 a 221  Q
    |    
T  29715570 a 29715570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 21 - 223
Target Start/End: Original strand, 23661431 - 23661619
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||| ||||||| || ||||||| || |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||       
T  23661431 tgcattagttaaccgcacagttgcagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaa--- 23661527  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
               |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  23661528 -----------gcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaacagtttggaaattcaaaaaca 23661616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 41 - 223
Target Start/End: Original strand, 12112628 - 12112822
Alignment:
Q  41 ttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctgg 140  Q
    ||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||| ||||| || |||||||||||||||||||||||||||||| |    
T  12112628 ttgtagttgagcttgttttatcctggaggcggtgtggttgatagtctgtcttgcacaactttggacagtgccacgaaacgtcttaaagagagcgacctag 12112727  T
Q  141 tcgtgactcaacctagtaacaacttcggtggat------------aatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 223  Q
    |||||| |||||||||||||||||||||| |||            ||||||||||| ||||||||||||||| ||||| ||||| ||||||||||    
T  12112728 tcgtgattcaacctagtaacaacttcggtagatattcctttttaaaatagaatttgaaaatccaaatacaacggtttgtaaatcaaaaaacaaca 12112822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 97 - 224
Target Start/End: Complemental strand, 27708928 - 27708802
Alignment:
Q  97 aattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaata 196  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  27708928 aattttgggcagtgccacgaaacgtcttaaagagaacgacctggtcgtgactcaacctagtaacaacttcggtatataatagaatttggaaatccaaata 27708829  T
Q  197 caactgtttggaaatccaaaaacaacag 224  Q
    |||| |||||||||| ||||||||||||    
T  27708828 caacagtttggaaat-caaaaacaacag 27708802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 21 - 124
Target Start/End: Complemental strand, 27709062 - 27708959
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| || ||||||| || |||||||||||||||||||||||||||||||||||| |||  |||||| ||||||||||| ||||| ||||||    
T  27709062 tgcagtagttaaccgcacagttgaagctgggcttgttttatcctggaggcggcgtggttgatagtctaccttgcataattttgggcagtgccatgaaacg 27708963  T
Q  121 tctt 124  Q
    ||||    
T  27708962 tctt 27708959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 23 - 167
Target Start/End: Complemental strand, 28125242 - 28125097
Alignment:
Q  23 cagtagttaatcgaacagttgtagttgggcttgtttt--atcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||| | || ||| |||||||||  ||||||||  ||||||||||| | |||||| ||| ||||||||||||||||||  ||| |||||||||| |    
T  28125242 cagtagttgaccgcacaattgtagttgaacttgtttttaatcctggaggcagtgtggttaatagtctgtcttgcacaattttaagcagtgccacgaaatg 28125143  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcg 167  Q
    ||||||| ||||| |||||||||||||||||||||||||||| ||||    
T  28125142 tcttaaa-agagcaacctggtcgtgactcaacctagtaacaatttcg 28125097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 109 - 223
Target Start/End: Original strand, 2207762 - 2207876
Alignment:
Q  109 tgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttgga 208  Q
    |||||| |||||||||||| ||||||||||||||||||||||| ||||| ||||||||| |  ||||||||||||  |||| |||||||||| ||||  |    
T  2207762 tgccactaaacgtcttaaaaagagcgacctggtcgtgactcaatctagtgacaacttcgataaataatagaatttaaaaattcaaatacaacagtttaaa 2207861  T
Q  209 aatccaaaaacaaca 223  Q
    |||||||||||||||    
T  2207862 aatccaaaaacaaca 2207876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 159
Target Start/End: Complemental strand, 26962154 - 26962050
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    ||||||||||||||| ||||||| ||| || |||  ||||||||| || | | | ||||||||||||||||||||||||||| |||||||||||||||||    
T  26962154 tgttttatcctggagacggcgtgtttgttagtctaccttgcacaactt-gtgtagtgccacgaaacgtcttaaagagagcgatctggtcgtgactcaacc 26962056  T
Q  154 tagtaa 159  Q
     |||||    
T  26962055 cagtaa 26962050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 153
Target Start/End: Complemental strand, 13022122 - 13022024
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    ||||||||||||||| ||||||||||| || |||  ||||||||| || ||| | |||| |||||||| ||||| |||||||||||||||||||||||||    
T  13022122 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgccgcgaaacgttttaaaaagagcgacctggtcgtgactcaacc 13022024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 166
Target Start/End: Complemental strand, 20507779 - 20507637
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    ||||||||||||||| |||  | | ||||| ||||||||||||| |||| || |||||||||| |||| |||||||||||||| ||| |||||| |||||    
T  20507779 tgcagtagttaatcgcacaactattgttggtcttgttttatcctagaggtggtgtggttgatagtctgccttgcacaattttgagcagtgccaccaaacg 20507680  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttc 166  Q
       ||||||||| ||||||| | || || |||| ||||| ||||||    
T  20507679 ---taaagagagtgacctggccatgcctaaaccaagtaataacttc 20507637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 158
Target Start/End: Original strand, 25726830 - 25726897
Alignment:
Q  91 ttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagta 158  Q
    |||||||||| |||| | |||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  25726830 ttgcacaattctgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaatctagta 25726897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 153
Target Start/End: Original strand, 33089343 - 33089441
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    ||||||||||| ||| ||||||||||| || |||  ||||||||| |  ||| | |||| ||||||||||||||||||||||||||||||||||||||||    
T  33089343 tgttttatcctagagacggcgtggttgttagtctaccttgcacaacta-gggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacc 33089441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 159
Target Start/End: Complemental strand, 48432519 - 48432398
Alignment:
Q  37 acagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgac 136  Q
    |||||||||| | |||| |||||||| ||| | || ||||||||||| ||||| || |||||||||||||| |||||| |||||||||||||||||||||    
T  48432519 acagttgtagctaggct-gttttatcttggggacgtcgtggttgatagtctgtttt-cacaattttgggcagtgccacaaaacgtcttaaagagagcgac 48432422  T
Q  137 ctggt-cgtgactcaacctagtaa 159  Q
    || || || |||||| ||||||||    
T  48432421 ctagtccgcgactcagcctagtaa 48432398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 150
Target Start/End: Original strand, 20090662 - 20090757
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||  ||  | |||| |||||||||||||||||||||||||||||||||||||    
T  20090662 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 20090757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 150
Target Start/End: Original strand, 20095787 - 20095882
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||  ||  | |||| |||||||||||||||||||||||||||||||||||||    
T  20095787 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 20095882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 150
Target Start/End: Original strand, 34129169 - 34129264
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||| ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  34129169 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 34129264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 153
Target Start/End: Complemental strand, 20810467 - 20810369
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    ||||||||||||||| ||||||||||| || |||  ||||||||| |  ||| | |||  |||||||||||||||||| |||||||||||||||||||||    
T  20810467 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacta-gggtagtgctgcgaaacgtcttaaagagaacgacctggtcgtgactcaacc 20810369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 153
Target Start/End: Complemental strand, 53119622 - 53119524
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    ||||||||||| ||| ||||||||||| || |||  ||||||||| || | | | |||| |||||||||||||||||||||||||| |||||||||||||    
T  53119622 tgttttatcctagagacggcgtggttgttagtctaccttgcacaactt-gagtagtgccgcgaaacgtcttaaagagagcgacctgatcgtgactcaacc 53119524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 159
Target Start/End: Original strand, 48435828 - 48435933
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggt-cgtgactcaac 152  Q
    ||||||||||||| | || ||||||||||| |||| ||||||| ||||||  || || ||||||||||||||||||||||||||| || || |||||| |    
T  48435828 tgttttatcctggggacgtcgtggttgatagtctg-cttgcactattttgaacagtgtcacgaaacgtcttaaagagagcgacctagtccgcgactcagc 48435926  T
Q  153 ctagtaa 159  Q
    |||||||    
T  48435927 ctagtaa 48435933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 159
Target Start/End: Original strand, 15768191 - 15768295
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||| ||  ||  | |||| ||||||||||||||||||||||||||||||||||||| ||    
T  15768191 tgttttatcctggagacggcgcggttgctagtctaccttgcacagttcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcc 15768289  T
Q  154 tagtaa 159  Q
     |||||    
T  15768290 cagtaa 15768295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 17364160 - 17364063
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcaca-attttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||| | ||| || | |||| |||||||||||||||| ||||||||||||||||||||    
T  17364160 tgttttatcctggagacggcgcggttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 17364063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 150
Target Start/End: Original strand, 3476946 - 3477041
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  3476946 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 3477041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 138
Target Start/End: Complemental strand, 4662279 - 4662196
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacct 138  Q
    ||||||||||||| | || | ||||||||| |||| |||||| ||||||||||||| |||| |||||||||| ||||||||||||    
T  4662279 tgttttatcctggggacgtcatggttgatagtctg-cttgcataattttgggcatttccactaaacgtcttagagagagcgacct 4662196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 150
Target Start/End: Original strand, 15763030 - 15763125
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||| ||  ||  | |||| |||||||||||||||||||||||||||||||||||||    
T  15763030 tgttttatcctggagacggcgcggttgctagtctaccttgcacagttcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 15763125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 16013816 - 16013724
Alignment:
Q  41 ttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggc-attgccacgaaacgtcttaaagagag 132  Q
    |||||| || |||| ||||||||||||||||||||||| |||| ||| ||||||||||||||  |  | || |||||||||||||||||||||    
T  16013816 ttgtagatgagcttattttatcctggaggcggcgtggtggatagtctatcttgcacaatttttagatagtgtcacgaaacgtcttaaagagag 16013724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 17368814 - 17368719
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  17368814 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 17368719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 54 - 153
Target Start/End: Original strand, 2617256 - 2617355
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    ||||||||||||||||||||| ||||| || |||  |||||||||  | | | | |||| |||||||||||||||| |||||| |||| |||||||||||    
T  2617256 tgttttatcctggaggcggcgcggttgttagtctaccttgcacaaactcgagtagtgccgcgaaacgtcttaaagaaagcgacatggttgtgactcaacc 2617355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 54 - 153
Target Start/End: Original strand, 38436991 - 38437089
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    ||||||||||||||| ||||||||||| || |||  ||| ||||| || ||  | ||||||||||||||||||||| || |||||| |||||||||||||    
T  38436991 tgttttatcctggagacggcgtggttgttagtctacctttcacaactt-ggatagtgccacgaaacgtcttaaagaaagtgacctgatcgtgactcaacc 38437089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 223
Target Start/End: Complemental strand, 16013693 - 16013644
Alignment:
Q  174 aatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 223  Q
    |||||| |||||||||||||||||||| |||||||||||||||| |||||    
T  16013693 aatagactttggaaatccaaatacaacagtttggaaatccaaaaccaaca 16013644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 138
Target Start/End: Complemental strand, 16983105 - 16983006
Alignment:
Q  37 acagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgac 136  Q
    |||||||||| |||| |||||||||||||| | |  ||||||||||| ||| |||| ||||||||||| || || || ||||||||||||| ||||||||    
T  16983105 acagttgtagctggg-ttgttttatcctggggacatcgtggttgatattct-tctttcacaattttggacagtgtcatgaaacgtcttaaaaagagcgac 16983008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 17357933 - 17357836
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcaca-attttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||| | ||| || | |||| |||||||||||||||| | ||||||||||||||||||    
T  17357933 tgttttatcctggagacggcgcggttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaagaaatcgacctggtcgtgactca 17357836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 159
Target Start/End: Original strand, 27605135 - 27605240
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    ||||||||||| ||||||| || |||| || |||  |||||||||  | ||| | |||  ||||| ||||||||||||||||| ||||||||||||||||    
T  27605135 tgttttatcctagaggcggtgtagttgttagtctaccttgcacaaactcgggtagtgctgcgaaatgtcttaaagagagcgacttggtcgtgactcaacc 27605234  T
Q  154 tagtaa 159  Q
    | ||||    
T  27605235 tggtaa 27605240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 150
Target Start/End: Original strand, 3482423 - 3482518
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  || ||| ||||| |||||||||| ||||||||||||||||||||    
T  3482423 tgttttatcctggagacggcgcggttgctagtctaccttgcacaaattaggtaat-gccgcgaaaagtcttaaagaaagcgacctggtcgtgactca 3482518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 6596322 - 6596386
Alignment:
Q  19 aatgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgata 83  Q
    |||||||||||||| |  | | |||||| || |||||||||||||||||||||||||||||||||    
T  6596322 aatgcagtagttaaccacataattgtagctgagcttgttttatcctggaggcggcgtggttgata 6596386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 165
Target Start/End: Original strand, 19276887 - 19277031
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||| ||| || | |||| || ||| ||||||||||| || |||||  ||||||||||| |||||||| ||||||||| | || |||||| ||| |    
T  19276887 tgcagtagctaaccgcatagttttaattgagcttgttttattctagaggcaacgtggttgatagtctgtcttacacaattttcgacagtgccacaaaaag 19276986  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaactt 165  Q
    ||||||| ||||  ||||  | || ||||||| || |||||||||    
T  19276987 tcttaaaaagagaaaccttattgtaactcaacttaataacaactt 19277031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 54270739 - 54270644
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| ||||| |||||||||| ||||||||||||||||||||    
T  54270739 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaatgtcttaaagaaagcgacctggtcgtgactca 54270644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 76
Target Start/End: Complemental strand, 55325897 - 55325847
Alignment:
Q  26 tagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtg 76  Q
    ||||||| || |||||||||  |||||||||||||||||||||||||||||    
T  55325897 tagttaaccgcacagttgtaactgggcttgttttatcctggaggcggcgtg 55325847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 151
Target Start/End: Original strand, 21494302 - 21494399
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaa 151  Q
    |||||||||| |||| ||||| ||||| || |||  |||||||||  ||||| | || |  || || |||||||||||||||||||||||||||||||    
T  21494302 tgttttatcccggagacggcgcggttgttagtctaccttgcacaaacttgggtactgtcgtgatacatcttaaagagagcgacctggtcgtgactcaa 21494399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 159
Target Start/End: Original strand, 7806553 - 7806656
Alignment:
Q  53 ttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 152  Q
    |||||||||||| ||||| |||||||||||| |||  ||   |||||||| || | || |  ||| |||||||||||||||||||||||||  |||||||    
T  7806553 ttgttttatcctcgaggcagcgtggttgatagtctacct---acaattttaggtagtgtcgtgaatcgtcttaaagagagcgacctggtcgcaactcaac 7806649  T
Q  153 ctagtaa 159  Q
    || ||||    
T  7806650 ctggtaa 7806656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 55128885 - 55128790
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  ||| ||||| || ||  | |||| |||||||||||||||| | ||||||||||||||||||    
T  55128885 tgttttatcctggagacggcgcggttgctagtctaccttacacaacttaggt-agtgccgcgaaacgtcttaaagaaaacgacctggtcgtgactca 55128790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 148
Target Start/End: Complemental strand, 10321483 - 10321444
Alignment:
Q  109 tgccacgaaacgtcttaaagagagcgacctggtcgtgact 148  Q
    |||| |||||||||||||||| ||||||||||||||||||    
T  10321483 tgccgcgaaacgtcttaaagaaagcgacctggtcgtgact 10321444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 162
Target Start/End: Original strand, 17026103 - 17026213
Alignment:
Q  52 cttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaa 151  Q
    |||||||||||||  || |  ||| ||||||| |||||||||||||| ||| | |  || ||  ||||||||||||||||||||  || |||||||| ||    
T  17026103 cttgttttatcctaaagacaacgttgttgatagtctgtcttgcacaaatttagacggtgtcagaaaacgtcttaaagagagcgaattgatcgtgacttaa 17026202  T
Q  152 cctagtaacaa 162  Q
    |||| ||||||    
T  17026203 cctattaacaa 17026213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 131
Target Start/End: Complemental strand, 46964109 - 46964031
Alignment:
Q  53 ttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagaga 131  Q
    |||||||||||| |||| ||| ||| ||||| ||||  ||||||||||||   || ||||| |||||||||||||||||    
T  46964109 ttgttttatcctagaggtggcatgggtgatagtctgcattgcacaattttaaacagtgccatgaaacgtcttaaagaga 46964031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 53358277 - 53358239
Alignment:
Q  115 gaaacgtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    ||||||||||||||| |||||||||| ||||||||||||    
T  53358277 gaaacgtcttaaagaaagcgacctggccgtgactcaacc 53358239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 1741108 - 1741153
Alignment:
Q  53 ttgttttatcctggaggcggcgtggttgataatctgtcttgcacaa 98  Q
    |||||||||||||||||||||| ||||| |||| || |||||||||    
T  1741108 ttgttttatcctggaggcggcgcggttgttaatttgccttgcacaa 1741153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 54 - 159
Target Start/End: Original strand, 4117600 - 4117704
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    ||||||||||||||| | ||| ||||| || |||  ||||||||| || ||  | |||| ||||| ||||||| || |||||||||||||||||||| ||    
T  4117600 tgttttatcctggagacagcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaatgtcttaacgaaagcgacctggtcgtgactcaccc 4117698  T
Q  154 tagtaa 159  Q
     |||||    
T  4117699 cagtaa 4117704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 10586248 - 10586281
Alignment:
Q  120 gtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    |||||||||| |||||||||||||||||||||||    
T  10586248 gtcttaaagaaagcgacctggtcgtgactcaacc 10586281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 109 - 150
Target Start/End: Original strand, 30341898 - 30341939
Alignment:
Q  109 tgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    |||| |||||||||||||||| || |||||||||||||||||    
T  30341898 tgccgcgaaacgtcttaaagaaagtgacctggtcgtgactca 30341939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 131
Target Start/End: Original strand, 1641069 - 1641149
Alignment:
Q  52 cttgttttatcc-tggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagaga 131  Q
    |||||||||||| || || ||| |||||||||| ||||||||  |||||||| |||| || | | ||||||||||||||||    
T  1641069 cttgttttatccctgaagacggggtggttgatagtctgtcttttacaatttttggcagtgtcgcaaaacgtcttaaagaga 1641149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 148
Target Start/End: Original strand, 1688948 - 1688980
Alignment:
Q  116 aaacgtcttaaagagagcgacctggtcgtgact 148  Q
    |||||||||||||| ||||||||||||||||||    
T  1688948 aaacgtcttaaagaaagcgacctggtcgtgact 1688980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 171; Significance: 6e-92; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 21 - 223
Target Start/End: Complemental strand, 30651057 - 30650855
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||    
T  30651057 tgcagtagttaatcgaacagttgtagctgggcttgttttatcttggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacg 30650958  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  30650957 tcttaaagagagcgatctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaacagtttggaaatccaaaaaca 30650858  T
Q  221 aca 223  Q
    |||    
T  30650857 aca 30650855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 21 - 223
Target Start/End: Original strand, 9189770 - 9189972
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| || ||||||||||||    
T  9189770 tgcagtagttaatcaaacagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttggacagtgccacgaaacg 9189869  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  9189870 tcttaaagagagcaacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaacagtttggaaatccaaaaaca 9189969  T
Q  221 aca 223  Q
    |||    
T  9189970 aca 9189972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 21 - 223
Target Start/End: Original strand, 19892433 - 19892635
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| ||||| |||||||||||||| || ||||| ||||||    
T  19892433 tgcagtagttaatcgaacagttgtagctgagcttgttttatcctggaggcggcgtggttgatagtctgtgttgcacaattttggacagtgccaggaaacg 19892532  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  19892533 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaacagtttggaaatccaaaaaca 19892632  T
Q  221 aca 223  Q
    |||    
T  19892633 aca 19892635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 21 - 223
Target Start/End: Original strand, 9180691 - 9180893
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| || ||||||||||||    
T  9180691 tgcagtagttaatcaaacagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttggacagtgccacgaaacg 9180790  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||| ||||||||    
T  9180791 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttgaaaatccaaatacaacagtttggaaattcaaaaaca 9180890  T
Q  221 aca 223  Q
    |||    
T  9180891 aca 9180893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 21 - 223
Target Start/End: Complemental strand, 18344559 - 18344357
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||| |||| |||||||||||||||||| ||||||||||||    
T  18344559 tgcagtagttaatcgaacagttgtagctgggcttgttttatcctggagccggcgtggttaatagtctgccttgcacaattttgggcagtgccacgaaacg 18344460  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  18344459 tcttaaagagagcgacctggtcgtgactcaatctagtaacaacttcggttgataatagaatttgaaaatccaaatacaacagtttggaaatccaaaaaca 18344360  T
Q  221 aca 223  Q
    |||    
T  18344359 aca 18344357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 21 - 224
Target Start/End: Original strand, 1934960 - 1935163
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||| ||||||| || ||||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  1934960 tgcattagttaaccgcacagttgcagctgggcttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacg 1935059  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||| ||||||||    
T  1935060 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaacagtttgaaaattcaaaaaca 1935159  T
Q  221 acag 224  Q
    ||||    
T  1935160 acag 1935163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 21 - 223
Target Start/End: Original strand, 7737818 - 7738020
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||     
T  7737818 tgcaatagttaatcgaacaattgtagttgggcttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacaaaact 7737917  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || | ||||||||||| ||    
T  7737918 tcttaaagagagcgacatggtcgtgactcaacctagtaacaacttcggtggataatagaatttgaaaatccaaatacaacagtatagaaatccaaaatca 7738017  T
Q  221 aca 223  Q
    |||    
T  7738018 aca 7738020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 21 - 223
Target Start/End: Complemental strand, 31326867 - 31326665
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||| || || ||||||    
T  31326867 tgcagtagttaatcgcacagttgtagttgggcttgttttatcctggaggtggcgtggttgatagtctgccttgcacaattttgggcagtggcatgaaacg 31326768  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||  ||||||||||||||||||    
T  31326767 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaattcaattacaacattttggaaatccaaaaaca 31326668  T
Q  221 aca 223  Q
    |||    
T  31326667 aca 31326665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 21 - 223
Target Start/End: Complemental strand, 35602050 - 35601848
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    ||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||    
T  35602050 tgcagtagttaatcgaacaattgtagctgggtttgttttatcctggaggcggcgtggttgatactctgtcttgcacaattttggacagtgccacgaaacg 35601951  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||  |||||||||||||||||||    
T  35601950 tcttaaaaagagcgacctggtcgtgattcaacctagtaacaacttcggtagataatagaatttgaaaatccaaatacaatagtttggaaatccaaaaaca 35601851  T
Q  221 aca 223  Q
    |||    
T  35601850 aca 35601848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 21 - 223
Target Start/End: Original strand, 35638964 - 35639166
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||    
T  35638964 tgcagtagttaatcgaacagttgtagctgagcttgttttatcctggaggcggcgtggttgatacgctgtcttgcacaattttgggcagtgccacgaaacg 35639063  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||| ||||||||||| |||||| ||||| |||||||||||||||| |||||||||||||| ||||||||||||||  |||||||||||||||||||    
T  35639064 tcttaaaaagagcgacctgatcgtgattcaacttagtaacaacttcggtagataatagaatttgaaaatccaaatacaatagtttggaaatccaaaaaca 35639163  T
Q  221 aca 223  Q
    |||    
T  35639164 aca 35639166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 26 - 223
Target Start/End: Original strand, 10160696 - 10160893
Alignment:
Q  26 tagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtctta 125  Q
    ||||||| || ||||||| || || ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||    
T  10160696 tagttaaccgcacagttgcagctgagcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtctta 10160795  T
Q  126 aagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 223  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||  ||||||||||||||||||||||    
T  10160796 aagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttagaaatccaaatacaagagtttggaaatccaaaaacaaca 10160893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 21 - 223
Target Start/End: Complemental strand, 30658391 - 30658189
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| || ||||||| || |||||||||||||||||||||||||||||||||||| |||| |||||||||||||| | | ||||||||||||    
T  30658391 tgcagtagttaaccgcacagttgcagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgagtagtgccacgaaacg 30658292  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||| |||||||||| |||||||||||||||||||    
T  30658291 tcttaaagagagcgacctggtcgtgactcaacatagtaacaacttcggtagataatagaacttggaaatgcaaatacaacagtttggaaatccaaaaaca 30658192  T
Q  221 aca 223  Q
    |||    
T  30658191 aca 30658189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 21 - 223
Target Start/End: Original strand, 42926726 - 42926929
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaac- 119  Q
    |||||||||||| || ||||||||||||| |||||| |||||||||||||||||||||||||| |||  |||||||||||||||||| |||||||||||     
T  42926726 tgcagtagttaaccgcacagttgtagttgagcttgtattatcctggaggcggcgtggttgatagtctaccttgcacaattttgggcagtgccacgaaacg 42926825  T
Q  120 -gtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaa 218  Q
     ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||| |||||||||||    
T  42926826 tgtcttaaagagagcggcctgatcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaata-aacagtttgaaaatccaaaaa 42926924  T
Q  219 caaca 223  Q
    |||||    
T  42926925 caaca 42926929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 26 - 223
Target Start/End: Original strand, 25478269 - 25478470
Alignment:
Q  26 tagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtctta 125  Q
    |||||| ||| |||||||||| |||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||| || ||||||||||||||    
T  25478269 tagttattcgcacagttgtagctgggcttgttttattctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgtcacgaaacgtctta 25478368  T
Q  126 aagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataata----gaatttggaaatccaaatacaactgtttggaaatccaaaaacaa 221  Q
    |||||||||||||||| ||||||||||||||||||||||||||| |||||||    ||||||||||||||||||||||  ||||| ||||||||||||||    
T  25478369 aagagagcgacctggttgtgactcaacctagtaacaacttcggtagataatagaatgaatttggaaatccaaatacaatagtttgaaaatccaaaaacaa 25478468  T
Q  222 ca 223  Q
    ||    
T  25478469 ca 25478470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 36 - 223
Target Start/End: Complemental strand, 30631692 - 30631505
Alignment:
Q  36 aacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcga 135  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||| |||||||||| || |||||||||| ||    
T  30631692 aacagttgcagttgggcttgttttatcctggaggtggcgtggttgatagtctttcttgcacaatttttggcaatgccacgaaaagttttaaagagagtga 30631593  T
Q  136 cctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 223  Q
    |||  ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  30631592 cctaatcgtgactcaacctagtaacaacttcggtagataatagaacttggaaatccaaatacaacagtttggaaatccaaaaacaaca 30631505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 21 - 223
Target Start/End: Complemental strand, 12797053 - 12796851
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| || ||||||||||  || ||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||| |||||| |||||    
T  12797053 tgcagtagttaaccgcacagttgtagccggacttgttttatcctggagacggcgtggttgatagtctgtcttgaacaattttgggcagtgccacaaaacg 12796954  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||  |||||||||||||| |||| |||||||||| || ||||||||||||||||    
T  12796953 tcttaaagagagcgatctggtcgtgactcaacctaataacaacttcggcagataatagaatttgaaaattcaaatacaacagtgtggaaatccaaaaaca 12796854  T
Q  221 aca 223  Q
    |||    
T  12796853 aca 12796851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 26 - 223
Target Start/End: Original strand, 25497297 - 25497498
Alignment:
Q  26 tagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtctta 125  Q
    ||||||| || |||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||| ||  |||||||||||||    
T  25497297 tagttaaccgcacagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgacttgcacaaatttgggcagtgttacgaaacgtctta 25497396  T
Q  126 aagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaa----tttggaaatccaaatacaactgtttggaaatccaaaaacaa 221  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||    |||||||||| ||||||||  ||||||||||||||||||||    
T  25497397 aagagagcgacctggtcgtgactcaacctagtaacaatttcggtagataatagaatgagtttggaaatctaaatacaatagtttggaaatccaaaaacaa 25497496  T
Q  222 ca 223  Q
    ||    
T  25497497 ca 25497498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 21 - 217
Target Start/End: Complemental strand, 28603431 - 28603230
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgtttt-atcctggaggcgg----cgtggttgataatctgtcttgcacaattttgggcattgccacg 115  Q
    |||||||||||||||||||||||||| ||  |||||||| ||||||||||  |    ||||||||||| |||||||||||||||||||| || || ||||    
T  28603431 tgcagtagttaatcgaacagttgtagctgaacttgtttttatcctggaggtaggtagcgtggttgatagtctgtcttgcacaattttggacagtgtcacg 28603332  T
Q  116 aaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaa 215  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  28603331 aaacgttttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaacagtttggaaatccaa 28603232  T
Q  216 aa 217  Q
    ||    
T  28603231 aa 28603230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 21 - 223
Target Start/End: Complemental strand, 29677509 - 29677308
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| || |||||||||| ||| ||| |||||||||||||||||||||||||||| ||||  ||||||||||||||||| ||||||||||||    
T  29677509 tgcagtagttaaccgcacagttgtagctggacttattttatcctggaggcggcgtggttgatagtctgctttgcacaattttgggcagtgccacgaaacg 29677410  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    |||||||||||||||| || ||||||||||||||||||||||||||| | |||||||||||||| |||| |||||||||| |||| |||||||||||| |    
T  29677409 tcttaaagagagcgacatgatcgtgactcaacctagtaacaacttcgctagataatagaatttgaaaattcaaatacaacagttt-gaaatccaaaaata 29677311  T
Q  221 aca 223  Q
    |||    
T  29677310 aca 29677308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 21 - 223
Target Start/End: Complemental strand, 29677895 - 29677694
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| || |||||||||| ||||||| |||||||||| ||||||| ||||||||| | || ||||||||||||| |||| |||||| ||| |    
T  29677895 tgcagtagttaaccgcacagttgtagctgggctttttttatcctgtaggcggcttggttgatagtttgccttgcacaatttttggcagtgccactaaatg 29677796  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  29677795 tcttaatgagagcgacctggtcgtgactcaacctagtaacaacttcgctagataatagaatttggaaatccaaatacaacagttt-gaaatccaaaaaca 29677697  T
Q  221 aca 223  Q
    |||    
T  29677696 aca 29677694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 21 - 169
Target Start/End: Original strand, 19094461 - 19094610
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgtttt-atcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaac 119  Q
    ||||||| ||||||| |||||||||| || ||||||||| ||||||||||||| |||||||||| | || |||||||||||||||||| | |||  ||||    
T  19094461 tgcagtaattaatcgcacagttgtagctgagcttgtttttatcctggaggcggtgtggttgatattttgccttgcacaattttgggcagtaccaaaaaac 19094560  T
Q  120 gtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggt 169  Q
    || |||| |||||||||||| ||||||||||||||| |||||||||||||    
T  19094561 gttttaaggagagcgacctgatcgtgactcaacctaataacaacttcggt 19094610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 41 - 223
Target Start/End: Original strand, 19578401 - 19578595
Alignment:
Q  41 ttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctgg 140  Q
    |||||||||| ||||||||| ||||||||| || ||||||||| |||  ||||||||||||| || | |||||| |||||||||||||||||||| ||||    
T  19578401 ttgtagttggacttgttttaccctggaggcagcatggttgatagtcttccttgcacaattttaggtagtgccacaaaacgtcttaaagagagcgatctgg 19578500  T
Q  141 tcgtgactcaacctagtaacaacttcggtggataat------------agaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 223  Q
    ||||||||||||||| ||||||||||||| |||| |            |||||||| ||||||||||||||  |||||||||||||||| |||||    
T  19578501 tcgtgactcaacctaataacaacttcggtagatattctctttcaaagtagaatttgaaaatccaaatacaatagtttggaaatccaaaaccaaca 19578595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 24 - 169
Target Start/End: Original strand, 40847565 - 40847710
Alignment:
Q  24 agtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtct 123  Q
    ||||||||| |  |||||||||||||| |||||||||||| ||||| ||||||||||||| | || ||||||||| ||||  || |||||| ||||||||    
T  40847565 agtagttaaccacacagttgtagttggacttgttttatccaggaggtggcgtggttgatagtttgccttgcacaactttgaacagtgccacaaaacgtct 40847664  T
Q  124 taaagagagcgacctggtcgtgactcaacctagtaacaacttcggt 169  Q
    |||||||| |||| |||||||||||||| |||||||||||||||||    
T  40847665 taaagagaacgacatggtcgtgactcaatctagtaacaacttcggt 40847710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 23 - 164
Target Start/End: Original strand, 21523689 - 21523829
Alignment:
Q  23 cagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtc 122  Q
    |||||||||| || |||||||||| ||  ||||||||| ||| || ||||||||||||||| |||  |||||||||||||||||| |||||||||||||     
T  21523689 cagtagttaaccgcacagttgtagctgaacttgttttaacctagaagcggcgtggttgatagtctcccttgcacaattttgggcagtgccacgaaacgt- 21523787  T
Q  123 ttaaagagagcgacctggtcgtgactcaacctagtaacaact 164  Q
    ||||||| ||| ||||||||||||||||||||| ||||||||    
T  21523788 ttaaagatagcaacctggtcgtgactcaacctattaacaact 21523829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 136 - 223
Target Start/End: Original strand, 15489796 - 15489883
Alignment:
Q  136 cctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 223  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |||| | ||||||||   ||||||||||||||||||||    
T  15489796 cctggtcgtgactcaacctagtaacaacttcggtagataatagaatttgaaaattctaatacaacatattggaaatccaaaaacaaca 15489883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 26 - 174
Target Start/End: Original strand, 17545270 - 17545419
Alignment:
Q  26 tagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtctta 125  Q
    ||||||| || || ||||||| || |||||||||||||| |||| ||||||||||||| ||| | |||||||| ||||   | || ||||||||||||||    
T  17545270 tagttaaccgcactgttgtagatgtgcttgttttatcctcgaggtggcgtggttgatagtcttttttgcacaactttgaaaagtgtcacgaaacgtctta 17545369  T
Q  126 a-agagagcgacctggtcgtgactcaacctagtaacaacttcggtggata 174  Q
    | | | | ||||||| |||| |||||||||||||||||||||||| ||||    
T  17545370 agaaaaaacgacctgatcgtaactcaacctagtaacaacttcggtagata 17545419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 78 - 223
Target Start/End: Complemental strand, 20711516 - 20711358
Alignment:
Q  78 ttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggat---- 173  Q
    |||||| ||||||||||||||||||| ||| ||| ||||||| |||||||  ||| ||  |||||||||||||||||||||||||||||||| |||        
T  20711516 ttgatagtctgtcttgcacaattttgagcagtgctacgaaacatcttaaaaggagtgatatggtcgtgactcaacctagtaacaacttcggtagatattt 20711417  T
Q  174 --------aatagaatttggaaatcc-aaatacaactgtttggaaatccaaaaacaaca 223  Q
            ||||||||||||||| || ||||||||| ||||| ||||||||||||||||    
T  20711416 tcttaaaaaatagaatttggaaaaccaaaatacaacagtttgtaaatccaaaaacaaca 20711358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 153
Target Start/End: Complemental strand, 42914737 - 42914639
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    ||||||||||||||| ||||||||||| || |||  ||||||||| || ||  | |||| |||||||||||||||||| |||||||||||||||||||||    
T  42914737 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagagaacgacctggtcgtgactcaacc 42914639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 54 - 159
Target Start/End: Complemental strand, 160136 - 160031
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    |||||||||  ||||||| || ||||||||  ||  |||||||||||||||| | || |  ||||||| ||||||||||||||||||||||| |||||||    
T  160136 tgttttatctcggaggcgacgcggttgatagcctaccttgcacaattttgggtagtgtcgtgaaacgtattaaagagagcgacctggtcgtgtctcaacc 160037  T
Q  154 tagtaa 159  Q
    ||||||    
T  160036 tagtaa 160031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 54 - 151
Target Start/End: Complemental strand, 5089373 - 5089277
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaa 151  Q
    ||||||||||||||| ||||||||||| || |||  ||||||||| || ||  | |||| ||||||||||||||||||||||||||||| ||||||||    
T  5089373 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccgcgaaacgtcttaaagagagcgacctggtcatgactcaa 5089277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 150
Target Start/End: Original strand, 42723451 - 42723546
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||  ||  | |||| |||||||||||||||||||||||||||||||||||||    
T  42723451 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 42723546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 150
Target Start/End: Original strand, 42728620 - 42728715
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||  ||  | |||| |||||||||||||||||||||||||||||||||||||    
T  42728620 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 42728715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 44096397 - 44096302
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||  ||  | |||| |||||||||||||||||||||||||||||||||||||    
T  44096397 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 44096302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 150
Target Start/End: Original strand, 44754596 - 44754691
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||  ||  | |||| |||||||||||||||||||||||||||||||||||||    
T  44754596 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 44754691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 150
Target Start/End: Original strand, 44759762 - 44759857
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||  ||  | |||| |||||||||||||||||||||||||||||||||||||    
T  44759762 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 44759857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 37 - 159
Target Start/End: Complemental strand, 14104701 - 14104580
Alignment:
Q  37 acagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgac 136  Q
    |||||||||| | |||| |||||||| ||| | || ||||||||||| | ||| ||||||||||||| ||| || |||||||||||||||||||||||||    
T  14104701 acagttgtagctaggct-gttttatcatggggacgtcgtggttgatagtttgt-ttgcacaattttgagcagtgacacgaaacgtcttaaagagagcgac 14104604  T
Q  137 ctggt-cgtgactcaacctagtaa 159  Q
    || || || |||||| ||||||||    
T  14104603 ctagtccgcgactcagcctagtaa 14104580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 159
Target Start/End: Original strand, 44957437 - 44957542
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggt-cgtgactcaac 152  Q
    |||||||||||||||  | ||||||||||| |||| |||||||||||||  ||| |||||| |||||||||||||||| |||||| || | ||||||| |    
T  44957437 tgttttatcctggagatgtcgtggttgatagtctg-cttgcacaattttttgcagtgccacaaaacgtcttaaagagaacgacctagtccatgactcagc 44957535  T
Q  153 ctagtaa 159  Q
    |||||||    
T  44957536 ctagtaa 44957542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 150
Target Start/End: Original strand, 40518472 - 40518567
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||| |||| ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  40518472 tgttttatcctggagacggcgcggttgctagtctaccttgcactatttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 40518567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 173
Target Start/End: Complemental strand, 32079510 - 32079354
Alignment:
Q  18 taatgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaa-ttttgggcattgccacga 116  Q
    ||||||| |||||||||| |||||||||| ||  | | ||||||||||||| |  |||| |||||| |||  ||| || || |||||| ||  | ||| |    
T  32079510 taatgcaatagttaatcgcacagttgtagctgaaccttttttatcctggagacaacgtgattgatagtctaccttacataaattttggacagcgtcacaa 32079411  T
Q  117 aacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggat 173  Q
    ||  ||||||||||||| ||||| |||||||||| || | ||| |||||||||||||    
T  32079410 aatttcttaaagagagcaacctgatcgtgactcagcccaataataacttcggtggat 32079354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 151
Target Start/End: Complemental strand, 39542936 - 39542900
Alignment:
Q  115 gaaacgtcttaaagagagcgacctggtcgtgactcaa 151  Q
    ||||||||||||||||||||||||| |||||||||||    
T  39542936 gaaacgtcttaaagagagcgacctgatcgtgactcaa 39542900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 223
Target Start/End: Original strand, 40847735 - 40847779
Alignment:
Q  179 aatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 223  Q
    |||||||||||||||||||||| ||||| ||||| ||||||||||    
T  40847735 aatttggaaatccaaatacaacagtttgaaaatctaaaaacaaca 40847779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 168
Target Start/End: Complemental strand, 7734707 - 7734581
Alignment:
Q  41 ttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctgg 140  Q
    |||||||||  |||||||| |||| |||||| |||||||||||   ||||||| ||||||| |  || || | |||||| ||| ||||  |||||||| |    
T  7734707 ttgtagttgaacttgttttttcctagaggcgacgtggttgatagcatgtcttgtacaatttaga-cagtgtcgcgaaacatctaaaaggaagcgacctag 7734609  T
Q  141 tcgtgactcaacctagtaacaacttcgg 168  Q
    ||||||||||||| | ||| ||||||||    
T  7734608 tcgtgactcaacccaataataacttcgg 7734581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 19538420 - 19538382
Alignment:
Q  115 gaaacgtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    |||| |||||||||| |||||||||||||||||||||||    
T  19538420 gaaatgtcttaaagaaagcgacctggtcgtgactcaacc 19538382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 6297951 - 6297984
Alignment:
Q  120 gtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    |||||||||| |||||||||||||||||||||||    
T  6297951 gtcttaaagaaagcgacctggtcgtgactcaacc 6297984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 109 - 150
Target Start/End: Original strand, 28751783 - 28751824
Alignment:
Q  109 tgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    |||| |||||||||| ||||| ||||||||||||||||||||    
T  28751783 tgccgcgaaacgtctaaaagaaagcgacctggtcgtgactca 28751824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 159
Target Start/End: Original strand, 39542566 - 39542610
Alignment:
Q  115 gaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaa 159  Q
    |||||||||||||||||| ||| | ||||||||||||||| ||||    
T  39542566 gaaacgtcttaaagagagtgacttagtcgtgactcaacctggtaa 39542610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 40392414 - 40392319
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||||||||| || |||  |||||||||  || || | |||| |||||||||||||||| | |   ||||||||||||||    
T  40392414 tgttttatcctggagacggcgtggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaaacagtctggtcgtgactca 40392319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 168; Significance: 4e-90; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 21 - 224
Target Start/End: Complemental strand, 7232 - 7029
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| || |||||||||| || ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||    
T  7232 tgcagtagttaaccgcacagttgtagctgagcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacg 7133  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  7132 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaacagtttggaaatccaaaaaca 7033  T
Q  221 acag 224  Q
    ||||    
T  7032 acag 7029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 167; Significance: 2e-89; HSPs: 81)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 21 - 223
Target Start/End: Complemental strand, 31273649 - 31273447
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| |  |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  31273649 tgcagtagttaaccacacagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacg 31273550  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  31273549 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaacagtttggaaattcaaaaaca 31273450  T
Q  221 aca 223  Q
    |||    
T  31273449 aca 31273447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 21 - 223
Target Start/End: Original strand, 5271386 - 5271586
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||| |||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  5271386 tgcaatagtgaatcaaacagttgtagttggacttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacg 5271485  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||  ||| |||||||||||||||||||    
T  5271486 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaattcaaat--aacagtttggaaatccaaaaaca 5271583  T
Q  221 aca 223  Q
    |||    
T  5271584 aca 5271586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 21 - 223
Target Start/End: Original strand, 37259844 - 37260046
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||||||| | | ||||||||||||    
T  37259844 tgcagtagttaaccgcacagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgagtagtgccacgaaacg 37259943  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  37259944 tcttaaagaaagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaacagtttggaaattcaaaaaca 37260043  T
Q  221 aca 223  Q
    |||    
T  37260044 aca 37260046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 21 - 223
Target Start/End: Original strand, 37264531 - 37264733
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| || ||| |||||| |||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||| ||||||||||||    
T  37264531 tgcagtagttaaccgcacaattgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcataattttgggcagtgccacgaaacg 37264630  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  37264631 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcgatagataatagaatttggaaatccaaatacaacagtttggaaattcaaaaaca 37264730  T
Q  221 aca 223  Q
    |||    
T  37264731 aca 37264733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 21 - 225
Target Start/End: Complemental strand, 8693839 - 8693635
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||| | ||||||||||||||||||| |  |||||||||||    
T  8693839 tgcagtagttaatcgaacagttgtagctgagcttgttttatccttgaggcggcgtggttgatagtatgtcttgcacaattttgggtagcgccacgaaacg 8693740  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||||||||||||||||||| ||||| |||||||||||||    
T  8693739 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcgatagacaatagaatttggaaatccaaatacaacagtttgaaaatccaaaaaca 8693640  T
Q  221 acaga 225  Q
    |||||    
T  8693639 acaga 8693635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 21 - 221
Target Start/End: Complemental strand, 31269162 - 31268962
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| |  || ||||||| ||| |||||||||||||||||||||||||||||||| |||| ||||||||||||| |||| ||||||||||||    
T  31269162 tgcagtagttaaccacacggttgtagctggacttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttaggcagtgccacgaaacg 31269063  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  31269062 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaacagtttggaaattcaaaaaca 31268963  T
Q  221 a 221  Q
    |    
T  31268962 a 31268962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 21 - 223
Target Start/End: Complemental strand, 16421157 - 16420956
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| || |||||||||| |||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||| |||||||||| |    
T  16421157 tgcagtagttaaccgcacagttgtagctgggcttgttttatcctgtaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaatg 16421058  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||| |||||||||||||||||||    
T  16421057 tcttaatgagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaa-ttggaaatctaaatacaacagtttggaaatccaaaaaca 16420959  T
Q  221 aca 223  Q
    |||    
T  16420958 aca 16420956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 21 - 223
Target Start/End: Original strand, 5928186 - 5928388
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||| |||| |||||||||||||| ||| |||||| ||||     
T  5928186 tgcagtagttaatcgaacagttgcagctgggcttgttttatcctggaggcggtgtggttgatagtctgccttgcacaattttgagcagtgccactaaaca 5928285  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| || |||||||||||| ||||||||||| |||||||    
T  5928286 tcttaaagagagcgacctggtcgtgactcaacctggtaacaacttcggtagataatagaatttgaaactccaaatacaacagtttggaaatctaaaaaca 5928385  T
Q  221 aca 223  Q
    |||    
T  5928386 aca 5928388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 21 - 223
Target Start/End: Complemental strand, 55251847 - 55251647
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| || ||||||||||||    
T  55251847 tgcagtagttaaccgtacagttgtagttgggcttgttttatcctggaggtggcgtggttgatagtctgtcttgcacaattttggacagtgccacgaaacg 55251748  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||  | |||||||||| ||||||||||||||||||| ||||||||||| |||||||    
T  55251747 tcttaaa-agagcgacctggtcgtgactcaacctagtaacaacttcaatagataatagaa-ttggaaatccaaatacaacagtttggaaatcgaaaaaca 55251650  T
Q  221 aca 223  Q
    |||    
T  55251649 aca 55251647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 21 - 223
Target Start/End: Original strand, 8030443 - 8030645
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||| |||| ||||||| ||| ||||||||||||||||||| |||||| |||||    
T  8030443 tgcagtagttaatcgaacatttgtagctgggcttgttttatcctggaggcagcgttgttgatagtctatcttgcacaattttgggcagtgccacaaaacg 8030542  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||||||||||||||| | |||| |||||||||||||||||||||| |||||||||||||| |||| |||||||||| ||||| |||| ||||||||    
T  8030543 tcttaaagagagcgacctgattgtgattcaacctagtaacaacttcggtagataatagaatttgaaaattcaaatacaacagtttgaaaattcaaaaaca 8030642  T
Q  221 aca 223  Q
    |||    
T  8030643 aca 8030645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 19 - 189
Target Start/End: Original strand, 33463321 - 33463491
Alignment:
Q  19 aatgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaa 118  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||| ||||||||| ||||| || ||||||||||    
T  33463321 aatgcagtagttaatcgaacagttgtagttgtgcttgttttatcctggaggcggcggggttgacaatctgccttgcacaactttggacagtgccacgaaa 33463420  T
Q  119 cgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaat 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  33463421 cgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcgatagataatagaatttggaaat 33463491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 52 - 223
Target Start/End: Original strand, 13521990 - 13522162
Alignment:
Q  52 cttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaa 151  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  13521990 cttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaa 13522089  T
Q  152 cctagtaacaacttcggtggataatagaatttggaaatcc-aaatacaactgtttggaaatccaaaaacaaca 223  Q
    |||||||||||||||||| || || |||||||||||| || ||||||||| ||||| ||||||||||||||||    
T  13522090 cctagtaacaacttcggtagaaaacagaatttggaaaaccaaaatacaacagtttgaaaatccaaaaacaaca 13522162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 21 - 218
Target Start/End: Original strand, 33468940 - 33469137
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    ||||||||||||||||||| |||||| || |||||||||||| |||||| ||||||||||| | |||| ||||||||| |||||||| |||||| |||||    
T  33468940 tgcagtagttaatcgaacaattgtagctgagcttgttttatcatggaggtggcgtggttgacagtctgccttgcacaactttgggcagtgccacaaaacg 33469039  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaa 218  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||| |||||||||||||||||    
T  33469040 tcttaaagagaacgacctagtcgtgactcaacctagtaacaacttcagtagataatagaatttgaaaatccaaatacaacagtttggaaatccaaaaa 33469137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 21 - 225
Target Start/End: Complemental strand, 19102105 - 19101901
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| || |||||||||||||| |||||||||||||||||||| ||||||||||| ||||| ||||||||||||| | | ||||||||||||    
T  19102105 tgcagtagttaaccgcacagttgtagttggacttgttttatcctggaggcgacgtggttgatagtctgttttgcacaattttgagtagtgccacgaaacg 19102006  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||| |||| ||||| ||||||||| |||||||||||||||| | | |||||||||||||||||||||||||||||| ||||  |||||||||||||    
T  19102005 tcttaaacagagtgacctcgtcgtgacttaacctagtaacaactttgatagataatagaatttggaaatccaaatacaacagtttataaatccaaaaaca 19101906  T
Q  221 acaga 225  Q
    |||||    
T  19101905 acaga 19101901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 52 - 223
Target Start/End: Original strand, 12823893 - 12824064
Alignment:
Q  52 cttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaa 151  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||    
T  12823893 cttgttttatcctggaggcggcgtggttgatagtttgtcttgcacaattttgggcagtgccacgaaatgtcttaaagagagcgacctggtcatgactcaa 12823992  T
Q  152 cctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 223  Q
    |||| ||||||||||||| || ||||||||||||||||||||||||||| |||| |||||| ||||||||||    
T  12823993 cctaataacaacttcggtagaaaatagaatttggaaatccaaatacaacagtttagaaatcaaaaaacaaca 12824064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 21 - 223
Target Start/End: Original strand, 32082058 - 32082259
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| || ||| |||||  || ||||||||||||||||||||||||||||||||| | || ||||||||||||||| || ||||| |||| |    
T  32082058 tgcagtagttaaccgcacaattgtaactgagcttgttttatcctggaggcggcgtggttgatagt-tgccttgcacaattttggacagtgccatgaaatg 32082156  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||| |||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  32082157 tcttaaaaagagtgatctggtcgtgactcaacctagtaacaacttcggttgataatagaatttggaaatccaaatacaacagtttggaaatccaaaaaca 32082256  T
Q  221 aca 223  Q
    |||    
T  32082257 aca 32082259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 33 - 200
Target Start/End: Complemental strand, 31766002 - 31765831
Alignment:
Q  33 tcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagag 132  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||    
T  31766002 tcgaacagttgtagctggacttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagag 31765903  T
Q  133 cgacctggtcgtgactcaacctagtaacaacttcggtgga----taatagaatttggaaatccaaatacaac 200  Q
     |||||||| ||||||||||||||||||||||||||| ||    |||||||||||||||||||||| |||||    
T  31765902 tgacctggttgtgactcaacctagtaacaacttcggtagataattaatagaatttggaaatccaaaaacaac 31765831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 26 - 221
Target Start/End: Complemental strand, 51698040 - 51697841
Alignment:
Q  26 tagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtctta 125  Q
    ||||||| || ||| ||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||| || || |||||||||||    
T  51698040 tagttaaccgcacaattgtagttgagcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgagcagtgtcatgaaacgtctta 51697941  T
Q  126 aagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataata----gaatttggaaatccaaatacaactgtttggaaatccaaaaacaa 221  Q
    || ||||||| ||||||||||||||||||||||||||||||||| |||||||    ||||||||||||||||||||||  ||||| ||||||||||||||    
T  51697940 aaaagagcgatctggtcgtgactcaacctagtaacaacttcggtagataatagaatgaatttggaaatccaaatacaatagtttgaaaatccaaaaacaa 51697841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 19 - 205
Target Start/End: Complemental strand, 13059540 - 13059354
Alignment:
Q  19 aatgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaa 118  Q
    |||||||||||||| |  |||||||||| || ||||||||||| || ||||||| |||||||||| ||||||||||||||||||  ||| ||||||||||    
T  13059540 aatgcagtagttaaccacacagttgtagctgagcttgttttattctagaggcggagtggttgatagtctgtcttgcacaattttatgcagtgccacgaaa 13059441  T
Q  119 cgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgttt 205  Q
    ||||||||||||||||| |||||| |||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||| ||||    
T  13059440 cgtcttaaagagagcgatctggtcatgactcaacctagtaataacttcggtagataatagaatttgaaaatccaaatacaacagttt 13059354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 21 - 211
Target Start/End: Complemental strand, 47244376 - 47244186
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||  | |||||||  || ||||||||||||    
T  47244376 tgcagtagttaaccgcacagttgtagttgtgcttgttttatcctggaggcggcgtggttgatagtctttcttcaataattttgaacagtgccacgaaacg 47244277  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaat 211  Q
    |||||||||| |||||||| ||||||||||||||| ||||||||||| | ||||||| |||||||||||||||||||||| |||| |||||    
T  47244276 tcttaaagagggcgacctgatcgtgactcaacctactaacaacttcgatagataatataatttggaaatccaaatacaacagtttagaaat 47244186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 21 - 167
Target Start/End: Original strand, 42758722 - 42758868
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    ||||||||||||||| ||||||||  |||| || ||||||| ||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||     
T  42758722 tgcagtagttaatcgcacagttgtttttggactagttttattctggaggcgacgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaaca 42758821  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcg 167  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  42758822 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcg 42758868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 53 - 223
Target Start/End: Complemental strand, 19106715 - 19106545
Alignment:
Q  53 ttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 152  Q
    ||||||||| ||||||||| ||||||||||| || | |||||||||||||||||| ||| | ||||||||||||||| ||||| ||| | ||||||||||    
T  19106715 ttgttttattctggaggcgacgtggttgatagtcagccttgcacaattttgggcagtgctatgaaacgtcttaaagaaagcgatctgcttgtgactcaac 19106616  T
Q  153 ctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 223  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |  |||| ||||||||||||||||    
T  19106615 ctagtaacaacttcggtagataatagaatttggaaatccaaatacagcaatttgaaaatccaaaaacaaca 19106545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 22 - 206
Target Start/End: Complemental strand, 47574752 - 47574567
Alignment:
Q  22 gcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgt 121  Q
    ||||||||||| || |||||||||| ||| |||||||||||||||| |||||||| |||||| | ||||||||||||||||||| | || || |||||||    
T  47574752 gcagtagttaaccgcacagttgtagctggacttgttttatcctggatgcggcgtgattgatattttgtcttgcacaattttgggtagtgtcaagaaacgt 47574653  T
Q  122 cttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttgg-aaatccaaatacaactgtttg 206  Q
    |||||||||||||||||| | ||||||||||||| |||||| |||||| ||||||||||||||| ||||| ||||||||| |||||    
T  47574652 cttaaagagagcgacctgattgtgactcaacctaataacaaattcggtagataatagaatttggaaaatcaaaatacaacagtttg 47574567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 22 - 190
Target Start/End: Complemental strand, 19906377 - 19906210
Alignment:
Q  22 gcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgt 121  Q
    |||||||||| || |||||||||||||| ||||||||||||||||||||||||  ||||||| |||||||||||||||||| | || || |||  |||||    
T  19906377 gcagtagtta-tcaaacagttgtagttgagcttgttttatcctggaggcggcggagttgatagtctgtcttgcacaattttagacagtgtcactgaacgt 19906279  T
Q  122 cttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatc 190  Q
    |||||| ||||||||||| ||||||||||||||| ||| ||||||||| ||||||| |||||| |||||    
T  19906278 cttaaaaagagcgacctgatcgtgactcaacctaataataacttcggtagataataaaatttgaaaatc 19906210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 21 - 223
Target Start/End: Original strand, 48276616 - 48276807
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||| |     |||||||||||||  || ||| || |||||    
T  48276616 tgcagtagttaatcgaacagttgtagctgaacttgttttatcctggaggcggcgtggttgatagt-----ttgcacaattttgaacagtgcaacaaaacg 48276710  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||||||||||||||| |||||| |||||||||||  ||||| ||| |||    |||||||||||||||||||||||  |||  ||||||||||| |    
T  48276711 tcttaaagagagcgacctgatcgtgattcaacctagta--aacttgggtagat----gaatttggaaatccaaatacaacaatttaaaaatccaaaaaga 48276804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 120 - 223
Target Start/End: Original strand, 32221163 - 32221266
Alignment:
Q  120 gtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaac 219  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||  |||| ||||||||||||    
T  32221163 gtcttaaagagagcgacctggtcgtgactcaacctagtaacaatttcggtagataatagaatttgaaaatccaaatacaacaatttgaaaatccaaaaac 32221262  T
Q  220 aaca 223  Q
    ||||    
T  32221263 aaca 32221266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 21 - 223
Target Start/End: Original strand, 31729354 - 31729540
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| || ||||||| || ||| ||||||||||||||||||||||||| |||||  |||| |||||||||||||||| | ||||||||||||    
T  31729354 tgcagtagttaaccgcacagttgcagctggacttgttttatcctggaggcggcgtgattgattgtctgccttgcacaattttgggtagtgccacgaaacg 31729453  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||||||||||||||| || ||                ||||| || |||||||||| ||||||||||||||||| | |||||||||||||||||||    
T  31729454 tcttaaagagagcgacctgatcatg----------------acttcagtagataatagaacttggaaatccaaatacagcagtttggaaatccaaaaaca 31729537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 162
Target Start/End: Original strand, 19541126 - 19541269
Alignment:
Q  19 aatgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaa 118  Q
    |||||||||||||||||||| ||||||| ||| |||||||||||||  ||||||||||||||||| ||||||||| ||||||||   || ||||||||||    
T  19541126 aatgcagtagttaatcgaactgttgtagctggacttgttttatcctataggcggcgtggttgatagtctgtcttgtacaattttaaacaatgccacgaaa 19541225  T
Q  119 cgtcttaaagagagcgacctggtcgtgactcaacctagtaacaa 162  Q
      ||||||| ||| ||| ||| ||||||||||||||||||||||    
T  19541226 tatcttaaaaagaacgatctgatcgtgactcaacctagtaacaa 19541269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 79 - 217
Target Start/End: Complemental strand, 51697072 - 51696931
Alignment:
Q  79 tgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataata- 177  Q
    ||||| |||| |||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||| || | | |||||||     
T  51697072 tgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaggagagcgacctggtcgtgactcaacctagtaacaa-tttgatagataatag 51696974  T
Q  178 ---gaatttggaaatccaaatacaactgtttggaaatccaaaa 217  Q
       ||||||| ||||||||||||||  ||||||||||||||||    
T  51696973 aatgaatttgaaaatccaaatacaaaagtttggaaatccaaaa 51696931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 37 - 166
Target Start/End: Complemental strand, 12878351 - 12878222
Alignment:
Q  37 acagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgac 136  Q
    |||||||||| ||  |||||||||| ||||||| |||||| |||||| ||||  |||||||||||||   | || |||||||||||||||||||||||||    
T  12878351 acagttgtagctgaacttgttttattctggaggtggcgtgattgatagtctgctttgcacaattttgaaaagtgtcacgaaacgtcttaaagagagcgac 12878252  T
Q  137 ctggtcgtgactcaacctagtaacaacttc 166  Q
    ||| ||||||||||||||||||||||||||    
T  12878251 ctgatcgtgactcaacctagtaacaacttc 12878222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 64 - 174
Target Start/End: Original strand, 13065778 - 13065888
Alignment:
Q  64 tggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaac 163  Q
    ||||||| |||||||||||| |||  ||| ||||| |||||||| ||||| |||||||||||||||||||||| | ||||||||||||||||||||||||    
T  13065778 tggaggctgcgtggttgatagtctccctttcacaactttgggcagtgccatgaaacgtcttaaagagagcgacatagtcgtgactcaacctagtaacaac 13065877  T
Q  164 ttcggtggata 174  Q
    |||||| ||||    
T  13065878 ttcggtagata 13065888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 52 - 167
Target Start/End: Complemental strand, 2819941 - 2819826
Alignment:
Q  52 cttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaa 151  Q
    |||||||||||||||| ||||| |||| |||| |||  ||||||||||||||| || | ||||||||| ||||||||| | |||||||||||||||||||    
T  2819941 cttgttttatcctggacgcggcatggtagatagtctaccttgcacaattttggacagtaccacgaaacatcttaaagaaaacgacctggtcgtgactcaa 2819842  T
Q  152 cctagtaacaacttcg 167  Q
     |||||||||||||||    
T  2819841 tctagtaacaacttcg 2819826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 167
Target Start/End: Complemental strand, 4551125 - 4550980
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    ||||||||||||||| | ||||||| ||| | ||||||||||||||||||||||| ||||||| |||||||||||||| |||| ||| || ||  ||| |    
T  4551125 tgcagtagttaatcgcagagttgtaattgagtttgttttatcctggaggcggcgtagttgatagtctgtcttgcacaactttgagcagtggcataaaatg 4551026  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcg 167  Q
    |||||||  || ||||||  || ||||||||||||||||||||||||    
T  4551025 tcttaaa-tgaacgacctaatcatgactcaacctagtaacaacttcg 4550980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 166
Target Start/End: Complemental strand, 12874664 - 12874522
Alignment:
Q  24 agtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtct 123  Q
    ||||||||| || ||| || ||| || |||||||||||||||||||||||||| |||||  ||||  |||||||||||| | || |||||||||  ||||    
T  12874664 agtagttaaccgcacaattttagctgagcttgttttatcctggaggcggcgtgattgatggtctgctttgcacaattttagacagtgccacgaattgtct 12874565  T
Q  124 taaagagagcgacctggtcgtgactcaacctagtaacaacttc 166  Q
    |||||||||||| ||| | ||||||||||||| ||||||||||    
T  12874564 taaagagagcgatctgattgtgactcaacctaataacaacttc 12874522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 43 - 167
Target Start/End: Original strand, 1151286 - 1151411
Alignment:
Q  43 gtagttgggcttgttttatcctggagg-cggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggt 141  Q
    ||||||| ||||||||||| ||||||| ||||||| |||||| |  |||||||||||||||||  | || || |||||||||||||||||| || ||| |    
T  1151286 gtagttgtgcttgttttatactggagggcggcgtgattgatagttagtcttgcacaattttggatagtgtcatgaaacgtcttaaagagagtgatctgat 1151385  T
Q  142 cgtgactcaacctagtaacaacttcg 167  Q
    || |||||||||||||||||||||||    
T  1151386 cgcgactcaacctagtaacaacttcg 1151411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 21 - 175
Target Start/End: Complemental strand, 32545223 - 32545068
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttg-cacaa-ttttgggcattgccacgaaa 118  Q
    ||||||||||| ||| ||| ||||||||| |||||||||||| ||||  |  ||||||||||| ||||||||| ||||| |||| |||  ||||||||||    
T  32545223 tgcagtagttagtcgcacaattgtagttgagcttgttttatcatggatacaacgtggttgatagtctgtcttgacacaatttttaggcggtgccacgaaa 32545124  T
Q  119 cgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataa 175  Q
    | ||||||| |||  |||||| |||||||||||||||||||||||||| || |||||    
T  32545123 catcttaaa-agattgacctgatcgtgactcaacctagtaacaacttcagtagataa 32545068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 653138 - 653043
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||||||||| || |||  ||||||||| || ||| | |||| |||||||||||||||||||||||||||||||||||||    
T  653138 tgttttatcctggagacggcgtggttgttagtctaccttgcacaaatt-gggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 653043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 56 - 159
Target Start/End: Original strand, 10120811 - 10120913
Alignment:
Q  56 ttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaaccta 155  Q
    ||||||||||||| ||||||||||| || |||  ||||||||| || ||| | |||| |||||||||||||||||||||||||| ||||||||||||||     
T  10120811 ttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgccgcgaaacgtcttaaagagagcgacctgatcgtgactcaacctg 10120909  T
Q  156 gtaa 159  Q
    ||||    
T  10120910 gtaa 10120913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 51 - 127
Target Start/End: Complemental strand, 16953183 - 16953107
Alignment:
Q  51 gcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaa 127  Q
    |||||||||||||||||||||  |||||||||| |||| |||||||||||||||| | | |||||||||||||||||    
T  16953183 gcttgttttatcctggaggcgttgtggttgatagtctgccttgcacaattttgggtagtaccacgaaacgtcttaaa 16953107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 160
Target Start/End: Complemental strand, 16948126 - 16947994
Alignment:
Q  24 agtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtct 123  Q
    |||||||||||| ||||||||   ||  |||||||||||||||||||||||| |||||||    ||||||||||||||| |||| | ||| ||| |||||    
T  16948126 agtagttaatcgcacagttgtcaatgaacttgttttatcctggaggcggcgtagttgata----gtcttgcacaattttaggcagtaccatgaatcgtct 16948031  T
Q  124 taaagagagcgacctggtcgtgactcaacctagtaac 160  Q
    | || |||| ||| ||||| |||||||||| ||||||    
T  16948030 tgaaaagagtgacatggtcatgactcaacccagtaac 16947994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 164 - 222
Target Start/End: Original strand, 55810257 - 55810315
Alignment:
Q  164 ttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaac 222  Q
    |||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  55810257 ttcggtagataatagaatttggaaatccaaatacaacagtttgaaaatccaaaaacaac 55810315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 53 - 138
Target Start/End: Original strand, 16595933 - 16596017
Alignment:
Q  53 ttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacct 138  Q
    |||||||||||||| | || ||||||||| | |||| ||||||||||||||| || |||||| |||||||||||||||||||||||    
T  16595933 ttgttttatcctggggacgtcgtggttgacagtctg-cttgcacaattttggacagtgccacaaaacgtcttaaagagagcgacct 16596017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 53 - 138
Target Start/End: Complemental strand, 20513202 - 20513118
Alignment:
Q  53 ttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacct 138  Q
    ||||||||||||||   || ||||||||||| |||| |||||||||||||| ||| ||||||||||| ||||||||||||||||||    
T  20513202 ttgttttatcctgggaacgtcgtggttgatagtctg-cttgcacaattttgagcagtgccacgaaacatcttaaagagagcgacct 20513118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 36354271 - 36354176
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||  ||  | |||| |||||||||||||||||||||||||||||||||||||    
T  36354271 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 36354176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 36359389 - 36359294
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||  ||  | |||| |||||||||||||||||||||||||||||||||||||    
T  36359389 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 36359294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 39999164 - 39999069
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||  ||  | |||| |||||||||||||||||||||||||||||||||||||    
T  39999164 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 39999069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 40004122 - 40004027
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||  ||  | |||| |||||||||||||||||||||||||||||||||||||    
T  40004122 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 40004027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 53797724 - 53797629
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||| ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  53797724 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 53797629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 54343298 - 54343203
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    |||||||||||| || ||||| ||||| || |||  |||||||||||  ||| | |||| |||||||||||||||||||||||||||||||||||||    
T  54343298 tgttttatcctgtagacggcgcggttgctagtctaccttgcacaattc-gggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 54343203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 54348452 - 54348357
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||  ||  | |||| |||||||||||||||||||||||||||||||||||||    
T  54348452 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 54348357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 37 - 159
Target Start/End: Original strand, 33722904 - 33723025
Alignment:
Q  37 acagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgac 136  Q
    |||||||||| |||||| |||||||||||| | || |||||| |||  |||| ||||||||||||||| || || ||||||||||||||||||||| |||    
T  33722904 acagttgtagctgggct-gttttatcctggggacgtcgtggtcgatggtctg-cttgcacaattttggacagtgtcacgaaacgtcttaaagagagtgac 33723001  T
Q  137 ctggt-cgtgactcaacctagtaa 159  Q
    || || || |||||| ||||||||    
T  33723002 ctagtccgcgactcagcctagtaa 33723025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 41 - 138
Target Start/End: Original strand, 15020454 - 15020549
Alignment:
Q  41 ttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacct 138  Q
    ||||||||| ||| ||||||||||||  ||| ||||||||||| ||||| ||||||||||||||| | || |||||||||| ||||||||||| ||||    
T  15020454 ttgtagttgtgct-gttttatcctgggagcgtcgtggttgatagtctgt-ttgcacaattttgggaagtgtcacgaaacgttttaaagagagcaacct 15020549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 88 - 157
Target Start/End: Original strand, 52691089 - 52691158
Alignment:
Q  88 gtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagt 157  Q
    ||||||||||||||||||||  | ||| ||||||||||||||||||||  || |||||||||||||||||    
T  52691089 gtcttgcacaattttgggcagagtcacaaaacgtcttaaagagagcgatatgatcgtgactcaacctagt 52691158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 165
Target Start/End: Complemental strand, 6070647 - 6070571
Alignment:
Q  89 tcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaactt 165  Q
    ||||||||||||||   || ||||| ||||| ||||||||||||||| |||||| |||||||| |||||||||||||    
T  6070647 tcttgcacaattttaaacaatgccaggaaacatcttaaagagagcgatctggtcatgactcaatctagtaacaactt 6070571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 150
Target Start/End: Original strand, 8980285 - 8980380
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  8980285 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 8980380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 150
Target Start/End: Original strand, 8985405 - 8985500
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  8985405 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 8985500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 13700605 - 13700510
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  13700605 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 13700510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 150
Target Start/End: Original strand, 21299833 - 21299928
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  21299833 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 21299928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 41393340 - 41393245
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  41393340 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 41393245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 150
Target Start/End: Original strand, 51019373 - 51019468
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  51019373 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 51019468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 54991581 - 54991486
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  54991581 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 54991486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 54 - 153
Target Start/End: Complemental strand, 24490127 - 24490028
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    |||||||||||||||| |||| ||||| || |||  |||||||||  |||   | || | |||||||||||||||||||||| |||||||||||||||||    
T  24490127 tgttttatcctggaggtggcgcggttgttagtctaccttgcacaaacttgattagtgtcgcgaaacgtcttaaagagagcgatctggtcgtgactcaacc 24490028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 41 - 151
Target Start/End: Complemental strand, 40408307 - 40408196
Alignment:
Q  41 ttgtagttgggcttgttttatcctggaggcggcgtggttg-ataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctg 139  Q
    |||||||||  |||||||||||||  | |||| ||| ||| ||||||| |||||||||| |||  ||| ||| || ||||||||||||||||| ||||||    
T  40408307 ttgtagttgaacttgttttatcctaaaagcggtgtgattggataatctatcttgcacaactttaagcagtgctacaaaacgtcttaaagagagtgacctg 40408208  T
Q  140 gtcgtgactcaa 151  Q
    ||||| ||||||    
T  40408207 gtcgtaactcaa 40408196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 13695254 - 13695159
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||| ||||||||| ||||||||||||||||||||    
T  13695254 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacatcttaaagaaagcgacctggtcgtgactca 13695159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 150
Target Start/End: Original strand, 21304953 - 21305048
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| ||||| |||||||||| ||||||||||||||||||||    
T  21304953 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaaagtcttaaagaaagcgacctggtcgtgactca 21305048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 150
Target Start/End: Original strand, 47046307 - 47046402
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| | ||||||||||||||||||    
T  47046307 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaaacgacctggtcgtgactca 47046402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 217
Target Start/End: Complemental strand, 23093155 - 23093112
Alignment:
Q  174 aatagaatttggaaatccaaatacaactgtttggaaatccaaaa 217  Q
    ||||||||||||||||||||||||||| |||| |||||||||||    
T  23093155 aatagaatttggaaatccaaatacaacagttttgaaatccaaaa 23093112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 148
Target Start/End: Original strand, 8083027 - 8083121
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgact 148  Q
    ||||||||| ||||||||||| ||||| || |||  ||||||| |  ||||  | ||||  ||||||||||||||||||||||||| ||||||||    
T  8083027 tgttttatcttggaggcggcgcggttgttagtctaccttgcactaacttggatagtgccgtgaaacgtcttaaagagagcgacctgatcgtgact 8083121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 223
Target Start/End: Original strand, 8652129 - 8652178
Alignment:
Q  175 atagaatttggaaa-tccaaatacaactgtttggaaatccaaaaacaaca 223  Q
    |||||||||||||| || ||||||||| ||||||||||||||||||||||    
T  8652129 atagaatttggaaaatcaaaatacaacagtttggaaatccaaaaacaaca 8652178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 223
Target Start/End: Original strand, 8663936 - 8663985
Alignment:
Q  175 atagaatttggaaa-tccaaatacaactgtttggaaatccaaaaacaaca 223  Q
    |||||||||||||| || ||||||||| ||||||||||||||||||||||    
T  8663936 atagaatttggaaaatcaaaatacaacagtttggaaatccaaaaacaaca 8663985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 13710763 - 13710669
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||  || || | |||| |||||||||||||||| ||||| ||||||||||||||    
T  13710763 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcga-ctggtcgtgactca 13710669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 8649600 - 8649643
Alignment:
Q  24 agtagttaatcgaacagttgtagttgggcttgttttatcctgga 67  Q
    ||||||||| || |||||||||||| ||||||||||||||||||    
T  8649600 agtagttaaccgcacagttgtagttaggcttgttttatcctgga 8649643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 8661407 - 8661450
Alignment:
Q  24 agtagttaatcgaacagttgtagttgggcttgttttatcctgga 67  Q
    ||||||||| || |||||||||||| ||||||||||||||||||    
T  8661407 agtagttaaccgcacagttgtagttaggcttgttttatcctgga 8661450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 153
Target Start/End: Original strand, 10318839 - 10318878
Alignment:
Q  114 cgaaacgtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    ||||| ||||||||||||||||| ||||||||||||||||    
T  10318839 cgaaatgtcttaaagagagcgacatggtcgtgactcaacc 10318878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 30564450 - 30564504
Alignment:
Q  90 cttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgt 144  Q
    ||||||||| |||||| | |||| |||||||||||| |||||||||||| |||||    
T  30564450 cttgcacaaatttgggtagtgccgcgaaacgtcttacagagagcgacctagtcgt 30564504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 39217367 - 39217490
Alignment:
Q  40 gttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctg 139  Q
    ||||||||||||||| |||||| || ||||  | |||||| ||| | | ||||| |||||||| | || || ||||||||||    |||||| ||||||     
T  39217367 gttgtagttgggctttttttatactagaggtagtgtggttaatagtttatcttgtacaattttagacagtgtcacgaaacgt----aagagaacgacctc 39217462  T
Q  140 gtcgtgactcaacctagtaacaacttcg 167  Q
    || ||||||||| | |||||||||||||    
T  39217463 gttgtgactcaatccagtaacaacttcg 39217490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 39319666 - 39319628
Alignment:
Q  115 gaaacgtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    ||||||||||||||| ||||||||| |||||||||||||    
T  39319666 gaaacgtcttaaagaaagcgacctgatcgtgactcaacc 39319628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 223
Target Start/End: Complemental strand, 12878202 - 12878153
Alignment:
Q  174 aatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 223  Q
    |||||||||||| || ||||||| |||  |||||||||||||||||||||    
T  12878202 aatagaatttgggaacccaaatataacaatttggaaatccaaaaacaaca 12878153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 34560527 - 34560494
Alignment:
Q  120 gtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    |||||||||| |||||||||||||||||||||||    
T  34560527 gtcttaaagaaagcgacctggtcgtgactcaacc 34560494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 114 - 171
Target Start/End: Complemental strand, 34644593 - 34644536
Alignment:
Q  114 cgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtgg 171  Q
    |||||||||||||||| |||||| || |||||||||||||  |||| | |||||||||    
T  34644593 cgaaacgtcttaaagaaagcgacatgatcgtgactcaacccggtaatatcttcggtgg 34644536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 153
Target Start/End: Original strand, 3998123 - 3998155
Alignment:
Q  121 tcttaaagagagcgacctggtcgtgactcaacc 153  Q
    ||||||||| |||||||||||||||||||||||    
T  3998123 tcttaaagaaagcgacctggtcgtgactcaacc 3998155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 161; Significance: 6e-86; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 26 - 226
Target Start/End: Complemental strand, 33416670 - 33416470
Alignment:
Q  26 tagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtctta 125  Q
    ||||||| || |||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  33416670 tagttaaccgcacagttgtagctgggcttgttttatcttggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtctta 33416571  T
Q  126 aagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaacaga 225  Q
    |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  33416570 aagagaccgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaattcaaatacaacagtttggaaatccaaaaacaacaga 33416471  T
Q  226 a 226  Q
    |    
T  33416470 a 33416470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 21 - 223
Target Start/End: Original strand, 31449833 - 31450035
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| || ||||||| || ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  31449833 tgcagtagttaaccgcacagttgcagctggacttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacg 31449932  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  31449933 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcgatagataatagaatttggaaatccaaatacaacactttggaaatccaaaaaca 31450032  T
Q  221 aca 223  Q
    |||    
T  31450033 aca 31450035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 21 - 223
Target Start/End: Complemental strand, 17026063 - 17025861
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||||||||||||||||| | | |||||||||||||||||||| |||| |||||| ||||||||||||||| ||||||| ||||||||||||    
T  17026063 tgcagtagttaatcgaacagttgtagctagacttgttttatcctggaggcgacgtgattgatagtctgtcttgcacaatgttgggcagtgccacgaaacg 17025964  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||| ||||| |||||||    
T  17025963 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaacaatttgaaaatctaaaaaca 17025864  T
Q  221 aca 223  Q
    |||    
T  17025863 aca 17025861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 21 - 223
Target Start/End: Complemental strand, 17556555 - 17556353
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||||||||||||||||| | | |||||||||||||||||||| |||| |||||| ||||||||||||||| ||||||| ||||||||||||    
T  17556555 tgcagtagttaatcgaacagttgtagctagacttgttttatcctggaggcgacgtgattgatagtctgtcttgcacaatgttgggcagtgccacgaaacg 17556456  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||| ||||| |||||||    
T  17556455 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaacaatttgaaaatctaaaaaca 17556356  T
Q  221 aca 223  Q
    |||    
T  17556355 aca 17556353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 21 - 223
Target Start/End: Original strand, 18876334 - 18876535
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| || |||||||||| || | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  18876334 tgcagtagttaaccgcacagttgtagatgagtttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacg 18876433  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| | |||||||||||||||||||    
T  18876434 tcttaaa-agagcgacctggtcgtgactcaacctagtaacaacttcggtatataatagaatttggaaatccaaatacagcagtttggaaatccaaaaaca 18876532  T
Q  221 aca 223  Q
    |||    
T  18876533 aca 18876535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 26 - 226
Target Start/End: Original strand, 44925895 - 44926095
Alignment:
Q  26 tagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtctta 125  Q
    ||||||| || | |||||||| ||  |||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||| |||    
T  44925895 tagttaaccgcatagttgtagatgaccttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtttta 44925994  T
Q  126 aagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaacaga 225  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||| | ||||||||||| ||||||||||||    
T  44925995 aagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataaaagaatttgaaaatccaaatacagcagtttggaaatcaaaaaacaacaga 44926094  T
Q  226 a 226  Q
    |    
T  44926095 a 44926095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 21 - 223
Target Start/End: Complemental strand, 34118594 - 34118392
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    ||||||||||||  | |||||||||| |||||||||||||||||  ||||| ||||||||||| |||| |||||||||||||||||| ||||| ||||||    
T  34118594 tgcagtagttaacagcacagttgtagctgggcttgttttatcctaaaggcgacgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacg 34118495  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||   |||||||||||||||||||    
T  34118494 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcagtagataatagaatttggaaatctaaatacattagtttggaaatccaaaaaca 34118395  T
Q  221 aca 223  Q
    |||    
T  34118394 aca 34118392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 21 - 223
Target Start/End: Original strand, 38182204 - 38182405
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    ||||||||||||  | |||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||| ||||| | ||||||||||||    
T  38182204 tgcagtagttaacagcacagttgtagctgtgcttgttttatcctggaggcggcgtggttgataatctgccttgcacaatcttgggaagtgccacgaaacg 38182303  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    | |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||  ||| ||||||||    
T  38182304 ttttaaagagagcgacctggtcgtgactcaacct-gtaacaacttcggtagataatagaatttggaaatccaaatacaacagtttgacaattcaaaaaca 38182402  T
Q  221 aca 223  Q
    |||    
T  38182403 aca 38182405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 21 - 223
Target Start/End: Original strand, 1910936 - 1911138
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| || ||||||||||||| ||||||||||| |||||||| |||||||||||| ||||  |||||||||||||   | ||||||||||||    
T  1910936 tgcagtagttaaccgcacagttgtagttgagcttgttttatactggaggcagcgtggttgatagtctgctttgcacaattttgactagtgccacgaaacg 1911035  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||||||||||||||| |||||||| |||||| ||||||||||| | |||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  1911036 tcttaaagagagcgacctgatcgtgacttaacctaataacaacttcgatagataatagaatttgaaaatccaaatacaacagtttggaaatccaaaaaca 1911135  T
Q  221 aca 223  Q
    |||    
T  1911136 aca 1911138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 21 - 223
Target Start/End: Complemental strand, 1807601 - 1807398
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgtttt-atcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaac 119  Q
    |||| ||||||| || |||||||||| ||| |||||||| ||||| |||||||||||||||||| |||| |||||||||||||||||| || ||||||||    
T  1807601 tgcactagttaaccgcacagttgtagctggacttgtttttatcctagaggcggcgtggttgatagtctgccttgcacaattttgggcagtgtcacgaaac 1807502  T
Q  120 gtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaac 219  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| | |||| ||||||||||  |||| ||||||||||||    
T  1807501 gtcttaaagagagcgacctagtcgtgactcaacctagtaacaacttcggtagataatagaattggaaaattcaaatacaacaatttgaaaatccaaaaac 1807402  T
Q  220 aaca 223  Q
    ||||    
T  1807401 aaca 1807398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 21 - 168
Target Start/End: Original strand, 40125852 - 40125999
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||    
T  40125852 tgcagtagttaatcgaacagttgtagctgggcttgttttatcttggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacg 40125951  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcgg 168  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  40125952 tcttaaagagagcgatctggtcgtgactcaacctagtaacaacttcgg 40125999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 90 - 223
Target Start/End: Original strand, 40130722 - 40130855
Alignment:
Q  90 cttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaat 189  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  40130722 cttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaat 40130821  T
Q  190 ccaaatacaactgtttggaaatccaaaaacaaca 223  Q
    ||||||||||| ||||||||||||||||||||||    
T  40130822 ccaaatacaacagtttggaaatccaaaaacaaca 40130855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 21 - 221
Target Start/End: Original strand, 28559621 - 28559821
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||| ||||||||||||||||| ||  ||||||| |||||||||| || |||||||||||||| | || ||||||||||||||| || ||||||||||||    
T  28559621 tgcaatagttaatcgaacagttctaactgggcttattttatcctgcagacggcgtggttgatagtttgccttgcacaattttggacagtgccacgaaacg 28559720  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||| |||||||||| | |||||||||||||||||||||||||||||| ||||||| |||||  ||||||||||||||| |||||||||||||||||||    
T  28559721 tcttatagagagcgacattgtcgtgactcaacctagtaacaacttcggtagataatataatttataaatccaaatacaacagtttggaaatccaaaaaca 28559820  T
Q  221 a 221  Q
    |    
T  28559821 a 28559821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 76 - 218
Target Start/End: Original strand, 4238337 - 4238479
Alignment:
Q  76 ggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataa 175  Q
    |||||||| |||| |||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4238337 ggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtgttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataa 4238436  T
Q  176 tagaatttggaaatccaaatacaactgtttggaaatccaaaaa 218  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  4238437 tagaatttggaaatccaaatacaacagtttggaaatccaaaaa 4238479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 21 - 175
Target Start/End: Complemental strand, 19166762 - 19166608
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    ||||||||||||  | ||||||||||||| ||||||||||||||||||||||||||||||||| |||| | |||||||||||||||| ||||||||||||    
T  19166762 tgcagtagttaacagcacagttgtagttgagcttgttttatcctggaggcggcgtggttgatagtctgccgtgcacaattttgggcagtgccacgaaacg 19166663  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataa 175  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| |||||    
T  19166662 tcttaaagagagcgacatggtcgtgactcaacctagtaacaacttcggtagataa 19166608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 76 - 218
Target Start/End: Original strand, 4243076 - 4243218
Alignment:
Q  76 ggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataa 175  Q
    |||||||| |||| |||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |||||    
T  4243076 ggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtgttaaagagagcgacctggtcgtgactcaacctagtaacaacttcgatagataa 4243175  T
Q  176 tagaatttggaaatccaaatacaactgtttggaaatccaaaaa 218  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  4243176 tagaatttggaaatccaaatacaacagtttggaaatccaaaaa 4243218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 21 - 167
Target Start/End: Original strand, 15875635 - 15875781
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    ||||||||||||||| ||| |||||| || ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||    
T  15875635 tgcagtagttaatcgtacaattgtagctgagcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacg 15875734  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcg 167  Q
    || ||||||||||||||||||||| ||||||  ||||||||||||||    
T  15875735 tcctaaagagagcgacctggtcgtaactcaatttagtaacaacttcg 15875781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 21 - 169
Target Start/End: Original strand, 17953839 - 17953988
Alignment:
Q  21 tgcagtagttaatcgaacagtt-gtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaac 119  Q
    ||||||||||||||  |||||| |||| || |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  17953839 tgcagtagttaatcacacagtttgtaggtgagcttgttttatcttggaggcggcgtggttgatattctgtcttgcacaattttgggcagtgccacgaaac 17953938  T
Q  120 gtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggt 169  Q
    |||||||||| |||||| ||||||| ||||||||||||||||||||||||    
T  17953939 gtcttaaagaaagcgacatggtcgttactcaacctagtaacaacttcggt 17953988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 21 - 177
Target Start/End: Complemental strand, 36683707 - 36683551
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    ||||||||||||||| |||| ||||| ||  ||||||||||||||||||| |||||||||||| |||| ||| |||||||||||||| ||||||||||||    
T  36683707 tgcagtagttaatcgcacagatgtagctgaccttgttttatcctggaggcagcgtggttgatagtctgccttacacaattttgggcagtgccacgaaacg 36683608  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataata 177  Q
    |||||||||||||||||| ||| ||||||||||||||||||||| |||| |||||||    
T  36683607 tcttaaagagagcgacctagtcatgactcaacctagtaacaactccggtagataata 36683551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 26 - 174
Target Start/End: Complemental strand, 24090750 - 24090602
Alignment:
Q  26 tagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtctta 125  Q
    ||||||| || |||||||||| |  |||||||||||| |||||||| |||| |||||| |||| ||||||||| |||||||| |||||||||||||||||    
T  24090750 tagttaaccgcacagttgtagataagcttgttttatcttggaggcgacgtgattgatattctgccttgcacaactttgggcagtgccacgaaacgtctta 24090651  T
Q  126 aagagagcgacctggtcgtgactcaacctagtaacaacttcggtggata 174  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  24090650 aagagagcgacctggtcgtgactcaacctagtaacaacttcggtagata 24090602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 21 - 223
Target Start/End: Complemental strand, 2965758 - 2965545
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    ||||||||||||  | | |||||||| ||| ||||||||||||| ||||||| |||||||||| | |||||||||||||||| |||| ||||||||||||    
T  2965758 tgcagtagttaactgcatagttgtagctggacttgttttatcctagaggcggtgtggttgatagtgtgtcttgcacaattttaggcagtgccacgaaacg 2965659  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggat------------aatagaatttggaaatccaaatacaactgtttgga 208  Q
    | ||||||||||||||||||||||||||| |||||||||||| || |||||||            |||||||||||||||| |||||||| | |||| ||    
T  2965658 ttttaaagagagcgacctggtcgtgactc-acctagtaacaaatttggtggatatttcttttcaaaatagaatttggaaattcaaatacagcagtttcga 2965560  T
Q  209 aatccaaaaacaaca 223  Q
    |||||||||||||||    
T  2965559 aatccaaaaacaaca 2965545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 23548597 - 23548752
Alignment:
Q  19 aatgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaa 118  Q
    |||||||||||||| ||  ||||||||| ||  ||||||||||||| |||||| ||||||||||| || | |||||||||||||   || ||||||||||    
T  23548597 aatgcagtagttaaccgcgcagttgtagctgaacttgttttatcctagaggcgacgtggttgatagtccgccttgcacaattttacacagtgccacgaaa 23548696  T
Q  119 cgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggata 174  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  23548697 cgtcttatagagagcgaccaggtcgtgactcaacctagtaacaacttcggtagata 23548752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 48 - 223
Target Start/End: Original strand, 43302712 - 43302880
Alignment:
Q  48 tgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaa-ttttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtga 146  Q
    |||||||||||||||||||||||||||||||||||| |||  ||||||||| |||||| || ||||||||||||||||||||||| ||||| |||||| |    
T  43302712 tgggcttgttttatcctggaggcggcgtggttgatagtctaccttgcacaatttttggacagtgccacgaaacgtcttaaagagaacgaccgggtcgtaa 43302811  T
Q  147 ctcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 223  Q
    |||| |||| ||||||||||        |||||| ||||||||||| ||||||| ||||| ||||||||||||||||    
T  43302812 ctcagcctaataacaacttc--------atagaacttggaaatccatatacaacagtttgaaaatccaaaaacaaca 43302880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 44 - 181
Target Start/End: Original strand, 2355449 - 2355586
Alignment:
Q  44 tagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcg 143  Q
    |||||||| |||||||||| | |||||||||||||||||| |||||||||||||||||||   | || |||||||||||||||| |||| ||  |||| |    
T  2355449 tagttgggtttgttttatctttgaggcggcgtggttgatagtctgtcttgcacaattttgaaaagtgtcacgaaacgtcttaaaaagagtgatatggtgg 2355548  T
Q  144 tgactcaacctagtaacaacttcggtggataatagaat 181  Q
    |||||||| ||||||||||||| ||| |||||||||||    
T  2355549 tgactcaatctagtaacaactttggtagataatagaat 2355586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 141 - 223
Target Start/End: Complemental strand, 19915155 - 19915073
Alignment:
Q  141 tcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 223  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||| ||||||||||||||||    
T  19915155 tcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatacaaatacaacagtttgtaaatccaaaaacaaca 19915073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 151
Target Start/End: Complemental strand, 7902688 - 7902561
Alignment:
Q  24 agtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtct 123  Q
    |||||||||||| ||| |||| | ||| ||||||||||||| ||| |||||||||||||||| ||||||  ||||||||||| | || |||||||| | |    
T  7902688 agtagttaatcgcacaattgttgatggacttgttttatcctagagacggcgtggttgataatatgtcttatacaattttgggtaatgtcacgaaacattt 7902589  T
Q  124 taaagagagcgacctggtcgtgactcaa 151  Q
    ||||||||||||| ||||||||||||||    
T  7902588 taaagagagcgacttggtcgtgactcaa 7902561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 21 - 160
Target Start/End: Original strand, 28564786 - 28564927
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttat--cctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaa 118  Q
    |||| ||||||||||||||||| ||   |||||||||||||  |||| || |||||||||| ||| ||||||||| ||||||||| ||| || || ||||    
T  28564786 tgcaatagttaatcgaacagttctaaccgggcttgttttatatcctgcagacggcgtggttaatagtctgtcttgaacaattttgagcagtgtcatgaaa 28564885  T
Q  119 cgtcttaaagagagcgacctggtcgtgactcaacctagtaac 160  Q
     || ||| ||||||||||||| ||||||||||||||||||||    
T  28564886 tgttttatagagagcgacctgatcgtgactcaacctagtaac 28564927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 21 - 160
Target Start/End: Original strand, 28572409 - 28572550
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttat--cctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaa 118  Q
    |||| ||||||||||||||||| ||   |||||||||||||  |||| || |||||||||| ||| ||||||||| ||||||||| ||| || || ||||    
T  28572409 tgcaatagttaatcgaacagttctaaccgggcttgttttatatcctgcagacggcgtggttaatagtctgtcttgaacaattttgagcagtgtcatgaaa 28572508  T
Q  119 cgtcttaaagagagcgacctggtcgtgactcaacctagtaac 160  Q
     || ||| ||||||||||||| ||||||||||||||||||||    
T  28572509 tgttttatagagagcgacctgatcgtgactcaacctagtaac 28572550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 54 - 151
Target Start/End: Original strand, 33616727 - 33616823
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaa 151  Q
    ||||||||||||||| ||||||||||| || |||  ||||||||| || ||| | |||| ||||||||||||||||||||||||||||||||||||||    
T  33616727 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaa 33616823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 54 - 153
Target Start/End: Complemental strand, 19430109 - 19430011
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    ||||||||||| ||| ||||||||||| || |||  ||||||||| || ||| | |||| ||||||||||||||||||||||||||||||||||||||||    
T  19430109 tgttttatcctagagacggcgtggttgttagtctaccttgcacaactt-gggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacc 19430011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 54 - 153
Target Start/End: Complemental strand, 19435611 - 19435513
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    ||||||||||| ||| ||||||||||| || |||  ||||||||| || ||| | |||| ||||||||||||||||||||||||||||||||||||||||    
T  19435611 tgttttatcctagagacggcgtggttgttagtctaccttgcacaactt-gggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacc 19435513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 54 - 153
Target Start/End: Complemental strand, 19566258 - 19566160
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    ||||||||||| ||| ||||||||||| || |||  ||||||||| || ||| | |||| ||||||||||||||||||||||||||||||||||||||||    
T  19566258 tgttttatcctagagacggcgtggttgttagtctaccttgcacaactt-gggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacc 19566160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 54 - 153
Target Start/End: Complemental strand, 19571760 - 19571662
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    ||||||||||| ||| ||||||||||| || |||  ||||||||| || ||| | |||| ||||||||||||||||||||||||||||||||||||||||    
T  19571760 tgttttatcctagagacggcgtggttgttagtctaccttgcacaactt-gggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacc 19571662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 54 - 153
Target Start/End: Complemental strand, 31030623 - 31030525
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    ||||||||||||||| ||||||||||| || |||  |||||| ||||| ||| | || | ||||||||||||||||||||||||||||||||||||||||    
T  31030623 tgttttatcctggagacggcgtggttgttagtctaccttgcataattt-gggtagtgtcgcgaaacgtcttaaagagagcgacctggtcgtgactcaacc 31030525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 54 - 169
Target Start/End: Complemental strand, 29220359 - 29220246
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    ||||||||||| ||||| |||||||||||| |||  ||||||||||||||  || || ||| |||||||||||  |||| ||||  ||||||||||||||    
T  29220359 tgttttatccttgaggcagcgtggttgatagtctaccttgcacaattttgatcagtgacacaaaacgtcttaa--agagtgacccagtcgtgactcaacc 29220262  T
Q  154 tagtaacaacttcggt 169  Q
    || |||||||||||||    
T  29220261 tactaacaacttcggt 29220246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 32015795 - 32015700
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||  ||  | ||||||||||||||||||||||||||||||||||||||||||    
T  32015795 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 32015700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 152
Target Start/End: Complemental strand, 17793584 - 17793450
Alignment:
Q  18 taatgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaa 117  Q
    |||||||| ||||||| | | |||||||||| | ||||||||||| |||||  | ||||||||||| | || |||| ||||||||| ||| || |  |||    
T  17793584 taatgcagaagttaatagcaaagttgtagttagacttgttttatcgtggagatgacgtggttgatagtttgacttgtacaattttgagcagtgtcgtgaa 17793485  T
Q  118 acgtcttaaagagagcgacctggtcgtgactcaac 152  Q
    |||||||||||||| |||| |||| ||||||||||    
T  17793484 acgtcttaaagagaacgacatggttgtgactcaac 17793450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 53 - 138
Target Start/End: Complemental strand, 2470070 - 2469986
Alignment:
Q  53 ttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacct 138  Q
    |||||||||||||| | || ||| ||||||| |||| |||||||||||||| ||| |||||| |||||||||||||||||||||||    
T  2470070 ttgttttatcctggggacgtcgtagttgatagtctg-cttgcacaattttgagcagtgccacaaaacgtcttaaagagagcgacct 2469986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 37 - 159
Target Start/End: Original strand, 4544235 - 4544356
Alignment:
Q  37 acagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgac 136  Q
    |||||||||| ||| || |||||||||| | | ||  |||||||||| |||  |||||||||||||| ||| ||||| ||||||||||||||||||||||    
T  4544235 acagttgtagctggact-gttttatcctagggacgtagtggttgatagtcta-cttgcacaattttgagcagtgccatgaaacgtcttaaagagagcgac 4544332  T
Q  137 ctggt-cgtgactcaacctagtaa 159  Q
    || || ||||||||| ||||||||    
T  4544333 ctagtccgtgactcagcctagtaa 4544356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 159
Target Start/End: Complemental strand, 19954348 - 19954262
Alignment:
Q  73 cgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtc-gtgactcaacctagtaa 159  Q
    ||||||||||| |||| |||| ||||||||||||| |||||| |||||||||||||||||||| || ||| | |||||||||||||||    
T  19954348 cgtggttgatagtctg-cttgtacaattttgggcagtgccacaaaacgtcttaaagagagcgatctagtctgcgactcaacctagtaa 19954262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 107
Target Start/End: Complemental strand, 10933559 - 10933474
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggca 107  Q
    ||||||||||||||  ||||||||||||||  |||||||||| |||||||| |||||||||||  || ||| |||||||||||||||    
T  10933559 tgcagtagttaatcacacagttgtagttggt-ttgttttatcatggaggcgacgtggttgatagcctatctggcacaattttgggca 10933474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 159
Target Start/End: Complemental strand, 13584453 - 13584341
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattt-------tgggcattgccacgaaacgtcttaaagagagcgacctggtcgtga 146  Q
    ||||||||||||||| ||||||||||| || |||  ||||||||| ||       |||| | |||| |||||||||||||||||||||||||||||||||    
T  13584453 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 13584354  T
Q  147 ctcaacctagtaa 159  Q
     ||||||| ||||    
T  13584353 ttcaacctggtaa 13584341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 159
Target Start/End: Complemental strand, 19949913 - 19949808
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggt-cgtgactcaac 152  Q
    ||||||||||||  | || | ||||||||| |||| ||||| |||||||||||| ||||||||||| |||||||||||||||| | || ||||||||| |    
T  19949913 tgttttatcctgaggacgtcatggttgatagtctg-cttgctcaattttgggcagtgccacgaaacttcttaaagagagcgacgtagtccgtgactcagc 19949815  T
Q  153 ctagtaa 159  Q
    |||||||    
T  19949814 ctagtaa 19949808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 45 - 167
Target Start/End: Original strand, 24673316 - 24673438
Alignment:
Q  45 agttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgt 144  Q
    ||||| |||||||||||  |||| | |  |||| ||||| ||| ||||||| |||||||  || || |||||||||| ||||| ||||||| ||| ||||    
T  24673316 agttgagcttgttttattttggaagtgttgtgggtgatagtctatcttgcataattttgaacagtgtcacgaaacgttttaaaaagagcgatctgatcgt 24673415  T
Q  145 gactcaacctagtaacaacttcg 167  Q
     ||||||||||||||||||||||    
T  24673416 aactcaacctagtaacaacttcg 24673438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 118
Target Start/End: Complemental strand, 12820467 - 12820370
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaa 118  Q
    ||||||||||| ||| |||||||||  ||  ||||||||||||||||||||| ||| |||||| | ||  |||||||||||| |||| ||||||||||    
T  12820467 tgcagtagttagtcgcacagttgtacctgaacttgttttatcctggaggcggtgtgattgatagtttgctttgcacaattttaggcagtgccacgaaa 12820370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 150
Target Start/End: Original strand, 17955789 - 17955884
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||| ||  | |||| |||||||||||||| | ||||||||||||||||||||    
T  17955789 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggt-agtgccgcgaaacgtcttaaaaaaagcgacctggtcgtgactca 17955884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 15951523 - 15951585
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataa 84  Q
    ||||||||||||  | |||||||||| |||||||||||||| ||||||||||||||||||||||    
T  15951523 tgcagtagttaactgcacagttgtagctgggcttgttttat-ctggaggcggcgtggttgataa 15951585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 138
Target Start/End: Complemental strand, 20072200 - 20072109
Alignment:
Q  44 tagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacct 138  Q
    |||||||||| |||||||| ||||| || |||||||||||||||  ||||||||||||| || | || ||||||| |||||||||||||||||||    
T  20072200 tagttgggct-gttttatc-tggagacgtcgtggttgataatcta-cttgcacaattttaggaaatgtcacgaaatgtcttaaagagagcgacct 20072109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 170
Target Start/End: Complemental strand, 5884058 - 5883978
Alignment:
Q  89 tcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtg 170  Q
    ||||| |||||||||| || | |||| |||||||||||| ||||| ||||||||||||||||||| ||||| ||||| ||||    
T  5884058 tcttgtacaattttggacactaccacaaaacgtcttaaa-agagctacctggtcgtgactcaacccagtaataactttggtg 5883978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 146
Target Start/End: Original strand, 21644081 - 21644172
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtga 146  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||    
T  21644081 tgttttatcctggagtcggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 21644172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 153
Target Start/End: Original strand, 42157871 - 42157970
Alignment:
Q  53 ttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 152  Q
    |||||||||||||||| |||| || |||||||||| | ||| ||||||||||  | |||| | ||| |||||||||| || ||| |||||||||||||||    
T  42157871 ttgttttatcctggagacggcatgattgataatctat-ttgtacaattttggatagtgccgcaaaatgtcttaaagatagtgacttggtcgtgactcaac 42157969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 150
Target Start/End: Original strand, 42514374 - 42514469
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| |||||||||||| |||||||    
T  42514374 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcatgactca 42514469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 43302658 - 43302714
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtgg 77  Q
    |||||||||||| || |||| || || ||||||||||||||||||||||||||||||    
T  43302658 tgcagtagttaaccgcacaggtgcagctgggcttgttttatcctggaggcggcgtgg 43302714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 128
Target Start/End: Complemental strand, 34517351 - 34517263
Alignment:
Q  37 acagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaag 128  Q
    ||||||||||||| | |||||||||| ||| |||| ||||||||||| |||  ||||||||||||||  || ||||||||||||||||||||    
T  34517351 acagttgtagttgag-ttgttttatcttgggggcgtcgtggttgatagtctc-cttgcacaattttga-cagtgccacgaaacgtcttaaag 34517263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 117 - 151
Target Start/End: Original strand, 15951584 - 15951618
Alignment:
Q  117 aacgtcttaaagagagcgacctggtcgtgactcaa 151  Q
    |||||||||||||||||||||||||||||||||||    
T  15951584 aacgtcttaaagagagcgacctggtcgtgactcaa 15951618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 150
Target Start/End: Complemental strand, 24884805 - 24884712
Alignment:
Q  56 ttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||| ||||||||||| || |||  ||||||||| || ||  | |||| | |||||||||||||| ||| ||||||||||||||||    
T  24884805 ttttatcctggagacggcgtggttgctagtctaccttgcacaacttaggt-agtgccgcaaaacgtcttaaagaaagctacctggtcgtgactca 24884712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 27415640 - 27415539
Alignment:
Q  20 atgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaac 119  Q
    ||||| || ||||||| ||| ||||||||  ||||||||||| ||| ||||| |||||||||||||  ||||  |||||| || || | |||||||||||    
T  27415640 atgcaatatttaatcgcacaattgtagttatgcttgttttattctgaaggcgacgtggttgataattcgtctgccacaatcttaggtagtgccacgaaac 27415541  T
Q  120 gt 121  Q
    ||    
T  27415540 gt 27415539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 159
Target Start/End: Original strand, 43999230 - 43999334
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    ||||||||||||||| |||||  |||| || |||  |||||||||||| ||  | |||| |||||||| ||||||| | ||||||| |||||||||||||    
T  43999230 tgttttatcctggagacggcgcagttgctagtctaccttgcacaatttaggt-agtgccgcgaaacgttttaaagaaaacgacctgatcgtgactcaacc 43999328  T
Q  154 tagtaa 159  Q
     |||||    
T  43999329 cagtaa 43999334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 215
Target Start/End: Original strand, 28565268 - 28565330
Alignment:
Q  153 ctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaa 215  Q
    ||||||||||||||| | ||||||| ||||| ||||| |||||| ||| ||||| ||||||||    
T  28565268 ctagtaacaacttcgatagataatataatttagaaattcaaataaaacagtttgaaaatccaa 28565330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 215
Target Start/End: Original strand, 28572891 - 28572953
Alignment:
Q  153 ctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaa 215  Q
    ||||||||||||||| | ||||||| ||||| ||||| |||||| ||| ||||| ||||||||    
T  28572891 ctagtaacaacttcgatagataatataatttagaaattcaaataaaacagtttgaaaatccaa 28572953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 158
Target Start/End: Original strand, 34818764 - 34818802
Alignment:
Q  120 gtcttaaagagagcgacctggtcgtgactcaacctagta 158  Q
    |||||||||| ||||||||||||||||||||||| ||||    
T  34818764 gtcttaaagaaagcgacctggtcgtgactcaacccagta 34818802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 158
Target Start/End: Complemental strand, 37771741 - 37771703
Alignment:
Q  120 gtcttaaagagagcgacctggtcgtgactcaacctagta 158  Q
    |||||||||| ||||||||||||||||||||||| ||||    
T  37771741 gtcttaaagaaagcgacctggtcgtgactcaacccagta 37771703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 109 - 150
Target Start/End: Complemental strand, 32010579 - 32010538
Alignment:
Q  109 tgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    |||| ||||| |||||||| ||||||||||||||||||||||    
T  32010579 tgccgcgaaatgtcttaaaaagagcgacctggtcgtgactca 32010538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 223
Target Start/End: Original strand, 15951623 - 15951659
Alignment:
Q  187 aatccaaatacaactgtttggaaatccaaaaacaaca 223  Q
    |||||||||||||| |||||||||| |||||||||||    
T  15951623 aatccaaatacaacagtttggaaatacaaaaacaaca 15951659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 223
Target Start/End: Original strand, 40126000 - 40126032
Alignment:
Q  191 caaatacaactgtttggaaatccaaaaacaaca 223  Q
    |||||||||| ||||||||||||||||||||||    
T  40126000 caaatacaacagtttggaaatccaaaaacaaca 40126032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 158; Significance: 4e-84; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 21 - 218
Target Start/End: Complemental strand, 4930361 - 4930164
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| | || ||| |||||||||||||| ||||||||||||    
T  4930361 tgcagtagttaaccgcacagttgtagttgggcttgttttatcctggaggcggcgtggttgatagtatgacttacacaattttgggcagtgccacgaaacg 4930262  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaa 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||    
T  4930261 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaacagtttggaaattcaaaaa 4930164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 21 - 223
Target Start/End: Complemental strand, 8268421 - 8268219
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||||||||||||||||| ||| ||||||||||| |||||| ||||||||||||| |||||||||||||||||||| || |||||| |||||    
T  8268421 tgcagtagttaatcgaacagttgtagctggacttgttttatcatggaggtggcgtggttgatagtctgtcttgcacaattttggacagtgccacaaaacg 8268322  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  8268321 tcttaaagagagcgacctggtcgtgactcaatatagtaacaacttcggtagataatagaatttggaaatgcaaatacaacagtttggaaatccaaaaaca 8268222  T
Q  221 aca 223  Q
    |||    
T  8268221 aca 8268219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 24 - 212
Target Start/End: Complemental strand, 26341324 - 26341136
Alignment:
Q  24 agtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtct 123  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| ||||    
T  26341324 agtagttaatcgaacagttgtagctggacttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaatgtct 26341225  T
Q  124 taaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatc 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||| |||||    
T  26341224 taaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagattttggaaatccaaatacaacagtttgaaaatc 26341136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 23 - 223
Target Start/End: Complemental strand, 8076176 - 8075975
Alignment:
Q  23 cagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtc 122  Q
    ||||||||||||| ||||||| || || |||||||||||||||||||| |||||||||||| |||||||||||||||||| |||| ||||||||||||||    
T  8076176 cagtagttaatcgcacagttgcagctgagcttgttttatcctggaggcagcgtggttgatagtctgtcttgcacaattttaggcagtgccacgaaacgtc 8076077  T
Q  123 ttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatcc-aaatacaactgtttggaaatccaaaaacaa 221  Q
    ||||||||||||||||||||||||||||||| |||||||||||| || |||||||||||||||||| || ||||||||| ||||||||||||||||||||    
T  8076076 ttaaagagagcgacctggtcgtgactcaacccagtaacaacttcagtagataatagaatttggaaaaccaaaatacaacagtttggaaatccaaaaacaa 8075977  T
Q  222 ca 223  Q
    ||    
T  8075976 ca 8075975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 21 - 221
Target Start/End: Original strand, 13314203 - 13314403
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    ||||||||||||| |||||||||||| || ||||||||||||||||||||| ||||| ||||| |||  |||||||||||||||||| | ||||||||||    
T  13314203 tgcagtagttaattgaacagttgtagctgagcttgttttatcctggaggcgacgtggctgatagtctaccttgcacaattttgggcagtaccacgaaacg 13314302  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||||||||||| |||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||| ||||||||| |||||||||    
T  13314303 tcttaaagagagcgatctggtcgtgactcaacctagtaacaactacggtagatagtagaatttggaaatccaaatacaacagtttggaaacccaaaaaca 13314402  T
Q  221 a 221  Q
    |    
T  13314403 a 13314403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 52 - 223
Target Start/End: Original strand, 9650965 - 9651137
Alignment:
Q  52 cttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaa 151  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  9650965 cttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaa 9651064  T
Q  152 cctagtaacaacttcggtggataatagaatttggaaatcc-aaatacaactgtttggaaatccaaaaacaaca 223  Q
    |||||||||||||||||| || || |||||||||||| || ||||||||| ||||| ||||||||||||||||    
T  9651065 cctagtaacaacttcggtagaaaacagaatttggaaaaccaaaatacaacagtttgaaaatccaaaaacaaca 9651137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 21 - 223
Target Start/End: Original strand, 44423104 - 44423307
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| || |||||||||| ||| |||||||||||||||||||||||| ||||||| |||| |||| |||||||||| || ||||||||||||    
T  44423104 tgcagtagttaaccgcacagttgtagatggacttgttttatcctggaggcggcgtagttgatagtctgccttgaacaattttggtcagtgccacgaaacg 44423203  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaattt-ggaaatccaaatacaactgtttggaaatccaaaaac 219  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||| ||||| ||||||||||||    
T  44423204 tcttaaagagagcgatctgatcgtgactcaacctagtaacaactttggtagataatagaatttgggaaatccaaatacaacagtttgaaaatccaaaaac 44423303  T
Q  220 aaca 223  Q
    ||||    
T  44423304 aaca 44423307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 21 - 167
Target Start/End: Complemental strand, 4579636 - 4579490
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    ||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||    
T  4579636 tgcagtagttaatcgcacagttgtagctggacttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacg 4579537  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcg 167  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  4579536 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcg 4579490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 21 - 200
Target Start/End: Original strand, 44510644 - 44510823
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    ||||| |||||| || ||||||| || || ||||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||| |||||    
T  44510644 tgcagaagttaaccgcacagttgcagctgagcttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttggacagtgccacaaaacg 44510743  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaac 200  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||    
T  44510744 tcttaaagagagcaatctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatacaaaaacaac 44510823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 23 - 169
Target Start/End: Original strand, 23246902 - 23247048
Alignment:
Q  23 cagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtc 122  Q
    ||||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||    
T  23246902 cagtagttaatcgcacagttgtaggtgagcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacatc 23247001  T
Q  123 ttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggt 169  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||    
T  23247002 ttaaagagagcgacctggtcgtgactcaatctagtaacaacttcggt 23247048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 21 - 152
Target Start/End: Complemental strand, 23866196 - 23866065
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| || ||||||| || || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  23866196 tgcagtagttaaccgcacagttgcagctgagcttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacg 23866097  T
Q  121 tcttaaagagagcgacctggtcgtgactcaac 152  Q
    ||||||||||||||||||||||||||||||||    
T  23866096 tcttaaagagagcgacctggtcgtgactcaac 23866065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 21 - 226
Target Start/End: Complemental strand, 27238370 - 27238164
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| |   ||||||||| ||| ||||||||||| || |||||||||| |||||| |||| ||| |||||||||| ||| |||||| |||||    
T  27238370 tgcagtagttaagcacgcagttgtagctggacttgttttatcttgcaggcggcgtgattgatagtctgccttacacaattttgagcagtgccacaaaacg 27238271  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttg-gaaatccaaatacaactgtttggaaatccaaaaac 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||| ||||  ||||||||||||||  |||| ||||||||||| |    
T  27238270 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttccatagataatagagtttgaaaaatccaaatacaatagtttagaaatccaaaatc 27238171  T
Q  220 aacagaa 226  Q
    | |||||    
T  27238170 atcagaa 27238164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 71 - 220
Target Start/End: Original strand, 42627214 - 42627364
Alignment:
Q  71 ggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacct-agtaacaacttcggt 169  Q
    ||||||||||||| ||||  |||||||||||||||   |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  42627214 ggcgtggttgatagtctgctttgcacaattttgggttgtgccacgaaacgtcttaaagagagcgacctggtcgtgaatcaacctaagtaacaacttcggt 42627313  T
Q  170 ggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
     ||||||||||||||||||| |||||||||| |||||||||| ||||||||    
T  42627314 agataatagaatttggaaattcaaatacaacagtttggaaattcaaaaaca 42627364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 21 - 223
Target Start/End: Original strand, 10388334 - 10388546
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    ||||||||||||||| ||||||||||||| | ||||||||||||||||||||||| ||||||  ||| || ||||||| || ||||| |||||| |||||    
T  10388334 tgcagtagttaatcgcacagttgtagttgagtttgttttatcctggaggcggcgttgttgatg-tctatcatgcacaactt-gggcaatgccacaaaacg 10388431  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggat------------aatagaatttggaaatccaaatacaactgtttgga 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||            ||||||||||||||||||||||||||| | ||| |    
T  10388432 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagatattctttttcaaaatagaatttggaaatccaaatacaacagcttgaa 10388531  T
Q  209 aatccaaaaacaaca 223  Q
    |||| ||||||||||    
T  10388532 aatctaaaaacaaca 10388546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 21 - 167
Target Start/End: Original strand, 25543329 - 25543475
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| || |||||||||| | | ||||||||||||||||||||  |||||||||| | | |||||||||||||| |||| | ||||||||||    
T  25543329 tgcagtagttaaccgcacagttgtagctagacttgttttatcctggaggcgatgtggttgatagtttatcttgcacaattttaggcagtaccacgaaacg 25543428  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcg 167  Q
    |||||||||| |||||||| | |||||||||||||||||||||||||    
T  25543429 tcttaaagagtgcgacctgattgtgactcaacctagtaacaacttcg 25543475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 91 - 223
Target Start/End: Complemental strand, 30256912 - 30256780
Alignment:
Q  91 ttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatc 190  Q
    ||||||||||||||||| |||||||||| |||||||| | ||||| |||||||||||||||||| |||| ||||||||| |||||||||||||| |||||    
T  30256912 ttgcacaattttgggcagtgccacgaaatgtcttaaaaacagcgatctggtcgtgactcaaccttgtaaaaacttcggtagataatagaatttgcaaatc 30256813  T
Q  191 caaatacaactgtttggaaatccaaaaacaaca 223  Q
    |||||||||  ||||  ||||||||||||||||    
T  30256812 caaatacaatagtttataaatccaaaaacaaca 30256780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 56 - 174
Target Start/End: Original strand, 3357634 - 3357752
Alignment:
Q  56 ttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaaccta 155  Q
    ||||||| ||||| |||||||||||||| |||| ||||||||| |||||||  | || ||||||||||||||||||||||||||||||||||||||||||    
T  3357634 ttttatcatggagacggcgtggttgatagtctgccttgcacaactttgggctgtaccgcgaaacgtcttaaagagagcgacctggtcgtgactcaaccta 3357733  T
Q  156 gtaacaacttcggtggata 174  Q
    |||||||||||||| ||||    
T  3357734 gtaacaacttcggtagata 3357752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 26 - 167
Target Start/End: Complemental strand, 12254202 - 12254061
Alignment:
Q  26 tagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtctta 125  Q
    ||||||| || |||||||||| ||  |||||||||||||| |||||||||| |||||| |||| ||||||||| ||| |||| |||||| |||| |||||    
T  12254202 tagttaaccgcacagttgtagctgaacttgttttatcctgtaggcggcgtgattgatagtctgccttgcacaactttaggcagtgccacaaaacatctta 12254103  T
Q  126 aagagagcgacctggtcgtgactcaacctagtaacaacttcg 167  Q
    |||||||||||||||||| |||||||||| ||||||||||||    
T  12254102 aagagagcgacctggtcgcgactcaacctggtaacaacttcg 12254061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 21 - 223
Target Start/End: Complemental strand, 21671323 - 21671109
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| || |||||||||| || ||||||||||| ||||| |||  || ||||||  |||| ||||||||| |||||||| |||||| ||||     
T  21671323 tgcagtagttaaccgcacagttgtaggtgagcttgttttattctggatgcgaagttgttgattgtctgccttgcacaactttgggcagtgccactaaact 21671224  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggat------------aatagaatttggaaatccaaatacaactgtttgga 208  Q
    |||||||||||| | ||| ||||||||||||||||||||||||||| |  |||            ||||||||||||||||||||||| || ||||||||    
T  21671223 tcttaaagagagggtcctagtcgtgactcaacctagtaacaacttcagcagatattctatttcaaaatagaatttggaaatccaaataaaattgtttgga 21671124  T
Q  209 aatccaaaaacaaca 223  Q
    |||||||||||||||    
T  21671123 aatccaaaaacaaca 21671109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 21 - 165
Target Start/End: Complemental strand, 9008291 - 9008147
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    ||||||||||||||  |||||||||||||| |||||||||||||||||||  | || ||||||  ||| |||||||||||||| | | || ||| |||||    
T  9008291 tgcagtagttaatcacacagttgtagttggacttgttttatcctggaggcttcatgattgatagcctgccttgcacaattttgagtagtgtcactaaacg 9008192  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaactt 165  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||    
T  9008191 tcttaaagagagggacatggtcgtgactcaacctagtaacaactt 9008147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 21 - 223
Target Start/End: Complemental strand, 3880123 - 3879922
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaa-ttttgggcattgccacgaaac 119  Q
    |||||||||||| |  | ||||||||| ||||||   |||||||||||||||||||||||||| |||  ||| ||||| |||||  || || ||| ||||    
T  3880123 tgcagtagttaaccacatagttgtagtggggctt---ttatcctggaggcggcgtggttgatagtcttccttacacaaattttgaacagtgtcacaaaac 3880027  T
Q  120 gtcttaaagagagcgacctggtcgtgactcaa-cctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaa 218  Q
    |||||||||| || |||||| ||||||||||| ||||||||||| ||||||||| ||||||||||||||||| |||||||||  |||  |||||||| ||    
T  3880026 gtcttaaagaaagtgacctgatcgtgactcaaacctagtaacaaattcggtggaaaatagaatttggaaatcaaaatacaacaatttaaaaatccaagaa 3879927  T
Q  219 caaca 223  Q
    |||||    
T  3879926 caaca 3879922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 39 - 169
Target Start/End: Complemental strand, 29151044 - 29150914
Alignment:
Q  39 agttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacct 138  Q
    |||||||| ||  ||| ||||||| |||||||| ||||||||||| | || |||||||||||||| ||| || |||||||||||||||| ||||||| ||    
T  29151044 agttgtagctgaacttattttatcttggaggcgacgtggttgatagtttgccttgcacaattttgagcagtgtcacgaaacgtcttaaaaagagcgatct 29150945  T
Q  139 ggtcgtgactcaacctagtaacaacttcggt 169  Q
    |||||||||||||||||||||||||||||||    
T  29150944 ggtcgtgactcaacctagtaacaacttcggt 29150914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 21 - 223
Target Start/End: Original strand, 26287112 - 26287339
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttg-------------cacaattttgggca 107  Q
    ||||||||||||  | |||||||||| |||  ||||||||||||||||||||||||||||||| ||||  |||             ||||||||||| ||    
T  26287112 tgcagtagttaactgcacagttgtagctggatttgttttatcctggaggcggcgtggttgatagtctgcgttgatagtctgccttacacaattttggaca 26287211  T
Q  108 ttgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtgg------------ataatagaatttggaaatccaaat 195  Q
     |||||  |||| ||||||||| |||| | |||||||||||||||||||||||||||||||| |            | ||||||||||||||||||||||    
T  26287212 atgccaaaaaacatcttaaagaaagcggcatggtcgtgactcaacctagtaacaacttcggtagagattatttttcaaaatagaatttggaaatccaaat 26287311  T
Q  196 acaactgtttggaaatccaaaaacaaca 223  Q
    ||||| |||| |||||||||||||||||    
T  26287312 acaacagttttgaaatccaaaaacaaca 26287339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 52 - 166
Target Start/End: Complemental strand, 16372491 - 16372381
Alignment:
Q  52 cttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaa 151  Q
    ||||||||||| |||||||| |||   ||||| |||||||||||| || ||||  | ||||||||||| |||||||||||||||| ||||||||||||||    
T  16372491 cttgttttatcttggaggcgacgt---tgatagtctgtcttgcacgatcttggt-agtgccacgaaacatcttaaagagagcgacttggtcgtgactcaa 16372396  T
Q  152 cctagtaacaacttc 166  Q
    |||||||||||||||    
T  16372395 cctagtaacaacttc 16372381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 54 - 153
Target Start/End: Complemental strand, 24528449 - 24528351
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    ||||||||||||||| ||||||||||| || |||  ||||||||| || ||| | |||| | ||||||||||||||||||||||||||||||||||||||    
T  24528449 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtaatgccgcaaaacgtcttaaagagagcgacctggtcgtgactcaacc 24528351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 12799540 - 12799455
Alignment:
Q  19 aatgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgg 104  Q
    |||||||||||||| || |||||||||| ||| ||| |||||||||||| | ||||||||||||| |||| |||||||||||||||    
T  12799540 aatgcagtagttaaccgcacagttgtagctggacttattttatcctggatgtggcgtggttgatagtctgccttgcacaattttgg 12799455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 174
Target Start/End: Complemental strand, 15642362 - 15642209
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| ||  | ||||||| || || |||||| ||||||||||| ||| ||||||| | |||||| |||||||||||  | || || ||||||    
T  15642362 tgcagtagttaaccgtgccgttgtagctgagcctgttttgtcctggaggcgacgtagttgatagtttgtcttccacaattttggatagtgtcatgaaacg 15642263  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggata 174  Q
    ||||||| ||||||||||| ||||||| |||    |||||||||||||| ||||    
T  15642262 tcttaaaaagagcgacctgatcgtgacacaattctgtaacaacttcggtagata 15642209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 6590948 - 6591054
Alignment:
Q  19 aatgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaa 118  Q
    |||| |||||||||||  |||||| ||  ||  |||||||||||||| ||||||||||||||||| |||| ||||||||||||| | || |||||| |||    
T  6590948 aatgtagtagttaatcacacagttataactgaacttgttttatcctgaaggcggcgtggttgatagtctgccttgcacaattttagacagtgccacaaaa 6591047  T
Q  119 cgtctta 125  Q
    |||||||    
T  6591048 cgtctta 6591054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 153
Target Start/End: Complemental strand, 9973558 - 9973459
Alignment:
Q  53 ttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 152  Q
    |||||||||||||||| ||||||||||| |  |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||||    
T  9973558 ttgttttatcctggagacggcgtggttgttcgtctaccttgcacaactt-ggatagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaac 9973460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 33238097 - 33238002
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||  ||  | |||| |||||||||||||||||||||||||||||||||||||    
T  33238097 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 33238002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 47999070 - 47998975
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||  ||  | |||| |||||||||||||||||||||||||||||||||||||    
T  47999070 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 47998975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 75 - 136
Target Start/End: Original strand, 29478176 - 29478236
Alignment:
Q  75 tggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgac 136  Q
    ||||||||| ||||| ||||||||||||||||| |||||||||||||||| |||||||||||    
T  29478176 tggttgatagtctgt-ttgcacaattttgggcagtgccacgaaacgtcttgaagagagcgac 29478236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 150
Target Start/End: Original strand, 2234630 - 2234725
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||| ||  | |||| |||||||||||||||| ||| ||||||||||||||||    
T  2234630 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggt-agtgccgcgaaacgtcttaaagaaagcaacctggtcgtgactca 2234725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 150
Target Start/End: Original strand, 16539412 - 16539507
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  16539412 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 16539507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 16626250 - 16626155
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  16626250 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 16626155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 150
Target Start/End: Original strand, 32212654 - 32212749
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| | ||| ||||| || |||  |||||||||||| ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  32212654 tgttttatcctggagacagcgcggttgctagtctaccttgcacaatttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 32212749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 33243274 - 33243179
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||  ||  | |||| ||||||||||||||||||| |||||||||||||||||    
T  33243274 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagtgacctggtcgtgactca 33243179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 42572040 - 42571945
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  42572040 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 42571945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 47993895 - 47993800
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||  ||  | |||| |||||||||||||||||||||||||||| ||||||||    
T  47993895 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggttgtgactca 47993800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 30258228 - 30258166
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgata 83  Q
    |||||||||||| || || ||||||| ||| ||||||||||||||||||||||||| ||||||    
T  30258228 tgcagtagttaaccgcactgttgtagctggacttgttttatcctggaggcggcgtgattgata 30258166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 148
Target Start/End: Complemental strand, 33226509 - 33226416
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgact 148  Q
    ||||||||||||| | ||||||||||| || |||  |||||| || || ||  | |||| |||||||||||||||||||||||||||||||||||    
T  33226509 tgttttatcctggtgacggcgtggttgttagtctaccttgcataacttaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgact 33226416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 13142884 - 13142973
Alignment:
Q  37 acagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaa 126  Q
    |||||||||| ||  ||||||||||||||| |||||||| ||||| | |||||| ||||||| ||||   | ||||||||||||||||||    
T  13142884 acagttgtagctgaacttgttttatcctggtggcggcgttgttgaaagtctgtcatgcacaactttgactagtgccacgaaacgtcttaa 13142973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 150
Target Start/End: Original strand, 21081039 - 21081136
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcaca-attttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||| | ||||| || |||  |||||||| | ||| || | |||| |||||||||||||||| ||||||||||||||||||||    
T  21081039 tgttttatcctggagacggtgcggttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 21081136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 153
Target Start/End: Original strand, 28292506 - 28292600
Alignment:
Q  57 tttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    |||||||||||| ||||||||||| || |||  |||||||||  ||||  | |||| |||||||||||||| |||||||||||||||||||| ||||    
T  28292506 tttatcctggagacggcgtggttgttagtctaccttgcacaa-cttggatagtgccgcgaaacgtcttaaa-agagcgacctggtcgtgacttaacc 28292600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 150
Target Start/End: Original strand, 47177119 - 47177214
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    |||||||||||| || ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  47177119 tgttttatcctgaagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 47177214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 159
Target Start/End: Original strand, 6898359 - 6898461
Alignment:
Q  57 tttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggt-cgtgactcaaccta 155  Q
    |||||||||| | ||  |||||||||| |||| ||||||||||||||| || |||||| |||| ||||||||||||||| || || || |||||| ||||    
T  6898359 tttatcctggggacgttgtggttgatagtctg-cttgcacaattttggacagtgccacaaaacatcttaaagagagcgatctagtccgcgactcagccta 6898457  T
Q  156 gtaa 159  Q
    ||||    
T  6898458 gtaa 6898461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 136
Target Start/End: Complemental strand, 3284820 - 3284740
Alignment:
Q  56 ttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgac 136  Q
    ||||||| || || ||| |||||||||| |||||||||||||| ||||  || |  |||||||| ||||||||||||||||    
T  3284820 ttttatcatgaagacggtgtggttgatagtctgtcttgcacaagtttgaacagtagcacgaaacatcttaaagagagcgac 3284740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 12934492 - 12934397
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| |  ||  | |||| ||||| |||||||||| ||||||||||||||||||||    
T  12934492 tgttttatcctggagacggcgcggttgctagtctaccttgcacaactcaggt-agtgccgcgaaatgtcttaaagaaagcgacctggtcgtgactca 12934397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 17495498 - 17495403
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||| ||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||| | ||||||||||||||||||||    
T  17495498 tgttttatcttggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaaaaaagcgacctggtcgtgactca 17495403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 150
Target Start/End: Original strand, 17557716 - 17557811
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||| ||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||| | ||||||||||||||||||||    
T  17557716 tgttttatcttggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaaaaaagcgacctggtcgtgactca 17557811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 43892953 - 43892858
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || | |  ||||||||| || ||  | ||||  ||||||||||||||| ||||||||||||||||||||    
T  43892953 tgttttatcctggagacggcgcggttgctagtttaccttgcacaacttaggt-agtgccgtgaaacgtcttaaagaaagcgacctggtcgtgactca 43892858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 138
Target Start/End: Original strand, 1289334 - 1289416
Alignment:
Q  55 gttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacct 138  Q
    |||||||| || |||||  |||||||||| |||| |||||| ||||||| | | || ||| |||||||||||||||||||||||    
T  1289334 gttttatcttgaaggcgttgtggttgatagtctg-cttgcataattttgagtagtgtcacaaaacgtcttaaagagagcgacct 1289416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 109 - 150
Target Start/End: Original strand, 22857741 - 22857782
Alignment:
Q  109 tgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    |||| |||||||||||||||| ||||||||| ||||||||||    
T  22857741 tgccgcgaaacgtcttaaagaaagcgacctgatcgtgactca 22857782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 27256272 - 27256239
Alignment:
Q  120 gtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    |||||||||| |||||||||||||||||||||||    
T  27256272 gtcttaaagaaagcgacctggtcgtgactcaacc 27256239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 171
Target Start/End: Original strand, 7875158 - 7875214
Alignment:
Q  115 gaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtgg 171  Q
    ||||||||||||||| ||||||||| || | ||||||||| |||| | |||||||||    
T  7875158 gaaacgtcttaaagaaagcgacctgatcattactcaacctggtaatatcttcggtgg 7875214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 149; Significance: 8e-79; HSPs: 62)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 21 - 228
Target Start/End: Original strand, 2700073 - 2700281
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||  || ||||||||||||    
T  2700073 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaagcggcgtggttgatagtctgtcttgcacaattttgaacagtgccacgaaacg 2700172  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatac-aactgtttggaaatccaaaaac 219  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||| ||| ||||| |||| |||||||    
T  2700173 tcttaaagagagcgatctggtcgtgactcaacctagtaacaacttcggtagatagtagaatttgaaaatccaaatactaacggtttgaaaattcaaaaac 2700272  T
Q  220 aacagaact 228  Q
    |||| ||||    
T  2700273 aacaaaact 2700281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 24 - 223
Target Start/End: Original strand, 6407830 - 6408029
Alignment:
Q  24 agtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtct 123  Q
    ||||||||| || |||||||||| || ||||||||||||||||||||||||||||||||| ||||  ||| ||||||||||||| |||||||||||||||    
T  6407830 agtagttaaccgcacagttgtagctgagcttgttttatcctggaggcggcgtggttgatagtctgctttgtacaattttgggcagtgccacgaaacgtct 6407929  T
Q  124 taaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 223  Q
    | |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  6407930 tcaagagagcgacctgatcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatacaacagtttggaaatccaaaaacaaca 6408029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 24 - 221
Target Start/End: Complemental strand, 12689096 - 12688899
Alignment:
Q  24 agtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtct 123  Q
    ||||||||| || |||||||||| || |||||||||||||||||| |||||||||||||| |||| |||||||||||||||||| |  ||| ||||||||    
T  12689096 agtagttaaccgcacagttgtagctgagcttgttttatcctggagacggcgtggttgatagtctgccttgcacaattttgggcagtatcacaaaacgtct 12688997  T
Q  124 taaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaa 221  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  12688996 taaagagagtgacctggtcatgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaacagtttgaaaatccaaaaacaa 12688899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 24 - 211
Target Start/End: Original strand, 11570719 - 11570906
Alignment:
Q  24 agtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtct 123  Q
    ||||||| | || |||||||||| || ||||||||||||||||||||||||||||||||  |||| |||||||||||||||||| |||||||||||||||    
T  11570719 agtagttcaccgcacagttgtagctgagcttgttttatcctggaggcggcgtggttgattgtctgccttgcacaattttgggcagtgccacgaaacgtct 11570818  T
Q  124 taaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaat 211  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||| ||||    
T  11570819 taaagagagcgacctggttgtgactcaacctagtaacaacttcggtagataatagaatttcgaaatccaaatacaacagtttgaaaat 11570906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 21 - 223
Target Start/End: Complemental strand, 8747910 - 8747708
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| |  | ||||| || || ||||||||||||||||||||||||| |||||||  |||||||||||||||||||||| || |||| ||||    
T  8747910 tgcagtagttaaccacatagttgcagctgagcttgttttatcctggaggcggcgttgttgatagcctgtcttgcacaattttgggcagtgtcacggaacg 8747811  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  8747810 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcaatagataatagaatttggaaatccaaatacaacagtttgtaaatccaaaaaca 8747711  T
Q  221 aca 223  Q
    |||    
T  8747710 aca 8747708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 19 - 224
Target Start/End: Original strand, 33687568 - 33687773
Alignment:
Q  19 aatgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaa 118  Q
    |||||||||||||| || ||||||||||||| | |||||||||||||||| |||| ||||||||| |||||||||||||||||||| || ||||||||||    
T  33687568 aatgcagtagttaaccgcacagttgtagttgagtttgttttatcctggagacggcatggttgatagtctgtcttgcacaattttggccagtgccacgaaa 33687667  T
Q  119 cgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaa 218  Q
    ||||||||||||||||||||||| || |||||||||| |||||| |||||| ||||| | |||||  ||||||||||||||| |||||||||||||||||    
T  33687668 cgtcttaaagagagcgacctggtggtaactcaacctaataacaatttcggtagataacaaaatttaaaaatccaaatacaacagtttggaaatccaaaaa 33687767  T
Q  219 caacag 224  Q
    ||||||    
T  33687768 caacag 33687773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 21 - 223
Target Start/End: Complemental strand, 21309159 - 21308960
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| || |||||||||| || ||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||| ||||| ||||||    
T  21309159 tgcagtagttaaccgcacagttgtagctgagcttgttttatcctggaggcggcgtggttgatagtctgcattgcacaattttgggcagtgccatgaaacg 21309060  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    |||||||||||||||  |||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||   ||||| |||||||||||||    
T  21309059 tcttaaagagagcgatatggtagtgactcaacctagtaacaacttcgatagataatagaatttggaaatccaaataca---gtttgaaaatccaaaaaca 21308963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 77 - 224
Target Start/End: Complemental strand, 19674385 - 19674238
Alignment:
Q  77 gttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataat 176  Q
    ||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||    
T  19674385 gttgatagtctgtcttgcacaattttgggcagtgccatgaaacgtcttaaagagagtgacctggtcgtgactcaacctagtaacaacttcggtaaataat 19674286  T
Q  177 agaatttggaaatccaaatacaactgtttggaaatccaaaaacaacag 224  Q
    |||||||| ||||||||||||||| ||||| |||||||||||||||||    
T  19674285 agaatttgaaaatccaaatacaacagtttgaaaatccaaaaacaacag 19674238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 200
Target Start/End: Complemental strand, 14509114 - 14508933
Alignment:
Q  19 aatgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaa 118  Q
    |||||||||||||||||||||||||||| || |||||||||||| |||| |||||||||||||||||||||||||||||||||||  || || |||||||    
T  14509114 aatgcagtagttaatcgaacagttgtagatgagcttgttttatcttggaagcggcgtggttgataatctgtcttgcacaattttgaacagtgacacgaaa 14509015  T
Q  119 cgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaac 200  Q
    |||||| ||||||||||| || || | | ||| |||| ||||||||| ||| |||||||||||||| ||||| ||| |||||    
T  14509014 cgtcttgaagagagcgacatgatcataaatcatcctaataacaactttggtagataatagaatttgaaaatctaaagacaac 14508933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 24589129 - 24589277
Alignment:
Q  19 aatgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaa 118  Q
    |||||||||||||| || |||||||||||||| ||||||||||||||||| |||||||||||||| ||| ||||||||||||||||  | || |||||||    
T  24589129 aatgcagtagttaaccgcacagttgtagttggacttgttttatcctggagacggcgtggttgatagtctatcttgcacaattttggaaagtgtcacgaaa 24589228  T
Q  119 cgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcg 167  Q
    ||| ||||||||||||| ||| |||||||||||| ||||||||||||||    
T  24589229 cgttttaaagagagcgatctgatcgtgactcaacttagtaacaacttcg 24589277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 112 - 224
Target Start/End: Original strand, 11534736 - 11534848
Alignment:
Q  112 cacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaat 211  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||| |||||||||||||||| ||||| ||||    
T  11534736 cacgaaacgtcttaaagagagcgacctggtcttgactcaacctagtaacaacttcagtagataatagaatttcgaaatccaaatacaacagtttgaaaat 11534835  T
Q  212 ccaaaaacaacag 224  Q
    |||||||||||||    
T  11534836 ccaaaaacaacag 11534848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 112 - 224
Target Start/End: Original strand, 11560246 - 11560358
Alignment:
Q  112 cacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaat 211  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||| |||||||||||||||| ||||| ||||    
T  11560246 cacgaaacgtcttaaagagagcgacctggtcttgactcaacctagtaacaacttcagtagataatagaatttcgaaatccaaatacaacagtttgaaaat 11560345  T
Q  212 ccaaaaacaacag 224  Q
    |||||||||||||    
T  11560346 ccaaaaacaacag 11560358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 29892226 - 29892374
Alignment:
Q  19 aatgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaa 118  Q
    |||||| ||||||| |  |||||||||| ||| |||||||||||||||||| || |||||||||| | ||||||||||||||||||||| |||||| |||    
T  29892226 aatgcaatagttaaccacacagttgtagctggacttgttttatcctggaggaggtgtggttgatagtttgtcttgcacaattttgggcagtgccaccaaa 29892325  T
Q  119 cgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcg 167  Q
    | |||||||||||||||||||  ||||||||||||||||||||||||||    
T  29892326 cttcttaaagagagcgacctgaccgtgactcaacctagtaacaacttcg 29892374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 85 - 217
Target Start/End: Complemental strand, 11428108 - 11427975
Alignment:
Q  85 tctgtcttgcacaa-ttttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaattt 183  Q
    |||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||  |||||| |||||    
T  11428108 tctgccttgcacaacttttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaatctaataacaacttcggtaaataataaaattt 11428009  T
Q  184 ggaaatccaaatacaactgtttggaaatccaaaa 217  Q
    | ||||||||||||||  ||||||||||||||||    
T  11428008 gaaaatccaaatacaatagtttggaaatccaaaa 11427975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 21 - 169
Target Start/End: Original strand, 12406320 - 12406468
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| |  ||||||||||||| || ||||||||| || |||||||||| |||||| |||  ||||||||| ||| |||| ||||||||||||    
T  12406320 tgcagtagttaaccacacagttgtagttgagcatgttttatcatgaaggcggcgtgattgatagtcttccttgcacaactttaggcactgccacgaaacg 12406419  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggt 169  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||    
T  12406420 tctttaagagagcgacctggtcgtgactcaatctagtaacaacttcggt 12406468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 21 - 165
Target Start/End: Original strand, 20748251 - 20748395
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| || |||||||||| ||| |||||||||| ||||||||||||||||||||| || | ||||||||||||||| || | ||| |||||     
T  20748251 tgcagtagttaaccgcacagttgtagatggacttgttttattctggaggcggcgtggttgatagtcggccttgcacaattttggacagtaccatgaaaca 20748350  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaactt 165  Q
    | |||||||| ||||||||||||||||||||||||||||||||||    
T  20748351 tgttaaagagggcgacctggtcgtgactcaacctagtaacaactt 20748395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 26 - 223
Target Start/End: Original strand, 25316535 - 25316739
Alignment:
Q  26 tagttaatcgaacagttgtagttgggcttgttttatcctggag---gcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtc 122  Q
    ||||||| || || ||||||| ||  |||||||||||||||||   ||||||||||| ||| | ||  ||||||||||||||||| |||||| |||||||    
T  25316535 tagttaaccgcacggttgtagatgaacttgttttatcctggagacggcggcgtggttcatagtttgctttgcacaattttgggcagtgccacaaaacgtc 25316634  T
Q  123 ttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataata----gaatttggaaatccaaatacaactgtttggaaatccaaaaa 218  Q
    |||||  |||||||||||||| ||||||| |||||||||| |||||| |||||||    ||||||||||||||||||| ||  |||||||||| ||||||    
T  25316635 ttaaattgagcgacctggtcgcgactcaatctagtaacaatttcggtagataatagaatgaatttggaaatccaaatataatagtttggaaattcaaaaa 25316734  T
Q  219 caaca 223  Q
    |||||    
T  25316735 caaca 25316739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 26 - 223
Target Start/End: Original strand, 26204029 - 26204233
Alignment:
Q  26 tagttaatcgaacagttgtagttgggcttgttttatcctggag---gcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtc 122  Q
    ||||||| || || ||||||| ||  |||||||||||||||||   ||||||||||| ||| | ||  ||||||||||||||||| |||||| |||||||    
T  26204029 tagttaaccgcacggttgtagatgaacttgttttatcctggagacggcggcgtggttcatagtttgctttgcacaattttgggcagtgccacaaaacgtc 26204128  T
Q  123 ttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataata----gaatttggaaatccaaatacaactgtttggaaatccaaaaa 218  Q
    |||||  |||||||||||||| ||||||| |||||||||| |||||| |||||||    ||||||||||||||||||| ||  |||||||||| ||||||    
T  26204129 ttaaattgagcgacctggtcgcgactcaatctagtaacaatttcggtagataatagaatgaatttggaaatccaaatataatagtttggaaattcaaaaa 26204228  T
Q  219 caaca 223  Q
    |||||    
T  26204229 caaca 26204233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 21 - 169
Target Start/End: Original strand, 13736645 - 13736793
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    ||||||||||| ||| ||| |||||| || |||||||||||||||||||| | ||||||| || |||  ||||||||||||| |||| ||||||||||||    
T  13736645 tgcagtagttattcgcacatttgtagatgtgcttgttttatcctggaggcagtgtggttggtagtcttccttgcacaattttaggcagtgccacgaaacg 13736744  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggt 169  Q
    || ||||||||| |||||||| | |||||||||||||||||||||||||    
T  13736745 tcgtaaagagagggacctggtggcgactcaacctagtaacaacttcggt 13736793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 21 - 167
Target Start/End: Original strand, 11614059 - 11614205
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||| ||||||| || ||| ||||| ||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||| |||||  |||||    
T  11614059 tgcattagttaaccgcacaattgtaattgtgcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgagcagtgccataaaacg 11614158  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcg 167  Q
    | ||||||||| | ||||  |||||||||||||||||||||||||||    
T  11614159 ttttaaagagaacaacctcatcgtgactcaacctagtaacaacttcg 11614205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 37 - 129
Target Start/End: Original strand, 16836139 - 16836231
Alignment:
Q  37 acagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaaga 129  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||| |||||||||||||||||||||    
T  16836139 acagttgtagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgtacaattttgggcagtgccacgaaacgtcttaaaga 16836231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 21 - 129
Target Start/End: Original strand, 17964526 - 17964634
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| || ||||||| || |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||  | ||||||||||||    
T  17964526 tgcagtagttaaccgcacagttgcagctgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttggatagtgccacgaaacg 17964625  T
Q  121 tcttaaaga 129  Q
    |||||||||    
T  17964626 tcttaaaga 17964634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 163
Target Start/End: Original strand, 22695236 - 22695380
Alignment:
Q  19 aatgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaa 118  Q
    |||||||| ||||| || |||||||||| ||  ||||||||||| ||||||||| ||| |||||  | ||||||||||||||||| ||| || |||||||    
T  22695236 aatgcagtggttaaccgcacagttgtagctgtacttgttttatcgtggaggcggtgtgattgattgtatgtcttgcacaattttgagcaatgtcacgaaa 22695335  T
Q  119 cgtcttaaagagagcgacctggtcgtgactcaacctagtaacaac 163  Q
    ||| ||||||||||| || |  ||||| |||||||||||||||||    
T  22695336 cgtgttaaagagagcaacataatcgtgtctcaacctagtaacaac 22695380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 17964634 - 17964696
Alignment:
Q  158 aacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  17964634 aacaacttcggtagataatagaatttggaaatccaaatacaacagtttggaaatccaaaaaca 17964696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 54 - 153
Target Start/End: Complemental strand, 19478243 - 19478145
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    ||||||||| ||||| ||||||||||| || |||  ||||||||| || ||| | |||| ||||||||||||||||||||||||||||||||||||||||    
T  19478243 tgttttatcgtggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacc 19478145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 56 - 153
Target Start/End: Complemental strand, 3902006 - 3901909
Alignment:
Q  56 ttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    ||||||||||||||||||| ||||| || |||  |||||||||  ||||  | |||| | ||||||||||||||||||||||||||||||||||||||    
T  3902006 ttttatcctggaggcggcgcggttggtattctaccttgcacaaacttggatagtgccgcaaaacgtcttaaagagagcgacctggtcgtgactcaacc 3901909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 167
Target Start/End: Complemental strand, 22609696 - 22609556
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaa-ttttgggcattgccacgaaac 119  Q
    |||||| |||||||   |||||||||||| ||||||||||||||||||||||||||  ||||| | | |||| ||||| |||| |||| | |||||||||    
T  22609696 tgcagttgttaatcacgcagttgtagttgagcttgttttatcctggaggcggcgtgactgatagtttatcttccacaatttttaggcagtaccacgaaac 22609597  T
Q  120 gtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcg 167  Q
    ||||||||||       |||||||||||| |||||| |||||||||||    
T  22609596 gtcttaaaga-------ctggtcgtgacttaacctaataacaacttcg 22609556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 54 - 154
Target Start/End: Original strand, 12183000 - 12183100
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    |||||||| ||||||||| || ||||| || |||   ||||||||  ||||| | |||| ||||||||||||||||||||||||||||||||||||||||    
T  12183000 tgttttattctggaggcgacgcggttgttagtctacattgcacaaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacc 12183099  T
Q  154 t 154  Q
    |    
T  12183100 t 12183100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 153
Target Start/End: Original strand, 13605092 - 13605190
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    ||||||||||||||| ||||||||||| || |||  ||||||||| || ||| | |||| |||||||||||||||||||| |||| ||||||||||||||    
T  13605092 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgccgcgaaacgtcttaaagagagcaacctagtcgtgactcaacc 13605190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 35129704 - 35129640
Alignment:
Q  73 cgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacct 138  Q
    ||||||||||| |||| |||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  35129704 cgtggttgatagtctg-cttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacct 35129640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 150
Target Start/End: Original strand, 22698243 - 22698338
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||  ||  | |||| |||||||||||||||||||||||||||||||||||||    
T  22698243 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 22698338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 31981655 - 31981560
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||| ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  31981655 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 31981560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 34142175 - 34142080
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||| |  |||||||||||||||||||| ||||||||||||||||||||    
T  34142175 tgttttatcctggagacggcgcggttgctagtctaccttgcacaactt-gggtagagccacgaaacgtcttaaagaaagcgacctggtcgtgactca 34142080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 34154791 - 34154696
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||| |  |||||||||||||||||||| ||||||||||||||||||||    
T  34154791 tgttttatcctggagacggcgcggttgctagtctaccttgcacaactt-gggtagagccacgaaacgtcttaaagaaagcgacctggtcgtgactca 34154696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 11534676 - 11534735
Alignment:
Q  19 aatgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggt 78  Q
    |||||||||||| | || ||||||||||||| ||||||||||||||||||||||||||||    
T  11534676 aatgcagtagttcaccgcacagttgtagttgagcttgttttatcctggaggcggcgtggt 11534735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 11560186 - 11560245
Alignment:
Q  19 aatgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggt 78  Q
    |||||||||||| | || ||||||||||||| ||||||||||||||||||||||||||||    
T  11560186 aatgcagtagttcaccgcacagttgtagttgagcttgttttatcctggaggcggcgtggt 11560245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 226
Target Start/End: Original strand, 2760240 - 2760427
Alignment:
Q  39 agttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacct 138  Q
    ||||||| ||| |||||||||||||||||||||   ||||||||| |||| |||||| |||          ||||| |||||| ||||||||| ||||||    
T  2760240 agttgtatttgagcttgttttatcctggaggcg---tggttgatagtctgccttgcataat----------gccacaaaacgttttaaagagaacgacct 2760326  T
Q  139 ggtcgtgactcaacctagtaacaacttcggtgg------------ataatagaatttggaaatcc-aaatacaactgtttggaaatccaaaaacaacaga 225  Q
    |||||| ||| |||||||||||||||||| | |            | |||| |||||||||| || ||||||||||||||||||||||||||||||||||    
T  2760327 ggtcgtaacttaacctagtaacaacttcgctagttattctctaacaaaatacaatttggaaaaccaaaatacaactgtttggaaatccaaaaacaacaga 2760426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 41 - 130
Target Start/End: Original strand, 32815051 - 32815138
Alignment:
Q  41 ttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagag 130  Q
    |||||| |||||| ||||||| |||| || | ||||||||||| |||| |||||||||||||||||| |||| |||||||||||||||||    
T  32815051 ttgtagctgggct-gttttatactgggggtgtcgtggttgatagtctg-cttgcacaattttgggcagtgccgcgaaacgtcttaaagag 32815138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 154
Target Start/End: Original strand, 5600972 - 5601072
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    ||||||||| ||||||||||| ||||| || |||  ||| |||||  | ||| | || | |||||||||||||||| |||||||||||||||||||||||    
T  5600972 tgttttatcttggaggcggcgcggttgttattctaccttacacaaactcgggtagtgtcgcgaaacgtcttaaagaaagcgacctggtcgtgactcaacc 5601071  T
Q  154 t 154  Q
    |    
T  5601072 t 5601072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 165
Target Start/End: Original strand, 9751775 - 9751920
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaa--ttttgggcattgccacgaaa 118  Q
    ||||||||||||||| ||| |||||||| | ||| |||||||||  || || |||| |||||| |    |||||||||  ||||||| | |||||| |||    
T  9751775 tgcagtagttaatcgcacaattgtagttagacttattttatcctacagacgacgtgattgatagttccccttgcacaattttttgggtagtgccacaaaa 9751874  T
Q  119 cgtcttaaagagagcgacctggtcgtgactcaacctagtaacaactt 165  Q
     |||||||||||||||| ||  ||||||||||||||||| |||||||    
T  9751875 tgtcttaaagagagcga-ctattcgtgactcaacctagtgacaactt 9751920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 54 - 153
Target Start/End: Complemental strand, 10642805 - 10642706
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    |||||||||| |||||||||| ||||| || |||  |||||||||  | ||  | ||||||||||||||||||||| |||||| | ||||||||||||||    
T  10642805 tgttttatccgggaggcggcgcggttgttagtctaccttgcacaacctcggatagtgccacgaaacgtcttaaagaaagcgacattgtcgtgactcaacc 10642706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 166
Target Start/End: Original strand, 2882821 - 2882867
Alignment:
Q  120 gtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttc 166  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||    
T  2882821 gtcttaaagagagcgatatggtcgtgactcaacctagtaacaacttc 2882867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 21396794 - 21396699
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    |||||||||||||||  |||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  21396794 tgttttatcctggagatggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 21396699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 150
Target Start/End: Original strand, 24192480 - 24192575
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| |  ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  24192480 tgttttatcctggagacggcgcggttgctagtctaccttgcacaactcaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 24192575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 150
Target Start/End: Original strand, 29491237 - 29491332
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| |||||| |||||||||||||    
T  29491237 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacttggtcgtgactca 29491332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 34376014 - 34375919
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| ||||||   |||||||| || ||  | |||| |||||||||||||||| ||||||||| ||||||||||    
T  34376014 tgttttatcctggagacggcgcggttgctaatctacgttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctgatcgtgactca 34375919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 166
Target Start/End: Original strand, 2863518 - 2863564
Alignment:
Q  120 gtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttc 166  Q
    ||||||||||||||||| || | ||||||||||||||||||||||||    
T  2863518 gtcttaaagagagcgacatgatagtgactcaacctagtaacaacttc 2863564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 11956762 - 11956800
Alignment:
Q  115 gaaacgtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  11956762 gaaacgtcttaaagagagcgacctggtcatgactcaacc 11956800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 152
Target Start/End: Complemental strand, 12851937 - 12851809
Alignment:
Q  26 tagttaatcgaacagttgtagttgggcttgtttt--atcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtct 123  Q
    |||||||||| ||| |||||||| | ||| ||||  ||||| || | ||| ||||||||| | || |||||||||||||||||| || | |||||| |||    
T  12851937 tagttaatcgcacaattgtagttagactttttttttatcctagaagtggcatggttgatagtttgccttgcacaattttgggcagtggcgcgaaacatct 12851838  T
Q  124 taaagagagcgacctggtcgtgactcaac 152  Q
    ||   |||||| | |||||||||||||||    
T  12851837 tatgaagagcgtcttggtcgtgactcaac 12851809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 150
Target Start/End: Complemental strand, 21401796 - 21401755
Alignment:
Q  109 tgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    |||| |||||||||||||||| ||||||||||||||||||||    
T  21401796 tgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 21401755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 223
Target Start/End: Complemental strand, 22609530 - 22609481
Alignment:
Q  174 aatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 223  Q
    ||||||||||||||||||||||||||  ||| |||||||||||| |||||    
T  22609530 aatagaatttggaaatccaaatacaatagttcggaaatccaaaaccaaca 22609481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 150
Target Start/End: Original strand, 24191437 - 24191478
Alignment:
Q  109 tgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    |||| |||||||||||||||| ||||||||||||||||||||    
T  24191437 tgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 24191478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 138
Target Start/End: Complemental strand, 14041749 - 14041703
Alignment:
Q  92 tgcacaattttgggcattgccacgaaacgtcttaaagagagcgacct 138  Q
    ||||||||||| |||| || |||||||||| ||||||||||||||||    
T  14041749 tgcacaattttaggcagtgtcacgaaacgttttaaagagagcgacct 14041703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 98
Target Start/End: Original strand, 4157336 - 4157413
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaa 98  Q
    |||||||||||| || || ||||||| || | |||||||||||| ||||| | |||||||| | | ||||||||||||    
T  4157336 tgcagtagttaaccgcaccgttgtagctgagtttgttttatcctagaggcagtgtggttgaaagtatgtcttgcacaa 4157413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 150
Target Start/End: Original strand, 6728397 - 6728430
Alignment:
Q  117 aacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||| ||||||||||||||||||||    
T  6728397 aacgtcttaaagaaagcgacctggtcgtgactca 6728430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 218
Target Start/End: Original strand, 13736814 - 13736855
Alignment:
Q  177 agaatttggaaatccaaatacaactgtttggaaatccaaaaa 218  Q
    |||||||||||||||||||||||   ||||||||||||||||    
T  13736814 agaatttggaaatccaaatacaaagttttggaaatccaaaaa 13736855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 15991829 - 15991878
Alignment:
Q  174 aatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 223  Q
    |||||||||||||||| ||||||||||  ||||||| ||||||| |||||    
T  15991829 aatagaatttggaaattcaaatacaacaatttggaattccaaaaccaaca 15991878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 15999491 - 15999540
Alignment:
Q  174 aatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 223  Q
    |||||||||||||||| ||||||||||  ||||||| ||||||| |||||    
T  15999491 aatagaatttggaaattcaaatacaacaatttggaattccaaaaccaaca 15999540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 53 - 110
Target Start/End: Original strand, 31990898 - 31990955
Alignment:
Q  53 ttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattg 110  Q
    |||||||||| |||||||| ||||||||||||| |  ||||||||| |||| ||||||    
T  31990898 ttgttttatcgtggaggcgtcgtggttgataatattccttgcacaactttgagcattg 31990955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 12406491 - 12406531
Alignment:
Q  182 ttggaaatccaaatacaactgtttggaaatccaaaaacaac 222  Q
    ||| ||||||||||||||| ||||| |||||||||||||||    
T  12406491 ttgaaaatccaaatacaacagtttgaaaatccaaaaacaac 12406531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 153
Target Start/End: Original strand, 17281618 - 17281662
Alignment:
Q  109 tgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    |||| |||||||||||||||| |||||| || |||||||||||||    
T  17281618 tgccgcgaaacgtcttaaagaaagcgacatgctcgtgactcaacc 17281662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 88
Target Start/End: Original strand, 19995373 - 19995437
Alignment:
Q  24 agtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctg 88  Q
    ||||||||| || | |||||||| |||||||||||||||| | ||| | ||||||||||| ||||    
T  19995373 agtagttaaccgcatagttgtagctgggcttgttttatcccgaaggtgccgtggttgatagtctg 19995437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 129; Significance: 7e-67; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 21 - 224
Target Start/End: Original strand, 166053 - 166257
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    ||||||| |||| || ||||||| || |||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||| ||||||||||||    
T  166053 tgcagtaattaaccgcacagttgcagctgggcttgttttatcctggaggcggcgtggttgatagtatgtcttgcacaatttttggcagtgccacgaaacg 166152  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatcc-aaatacaactgtttggaaatccaaaaac 219  Q
    ||||||||||||||||||||| |||||||||||||||| ||| |||||| || || |||||||||||| || ||||||||| ||||||||||||||||||    
T  166153 tcttaaagagagcgacctggttgtgactcaacctagtatcaatttcggtagaaaacagaatttggaaaaccaaaatacaacagtttggaaatccaaaaac 166252  T
Q  220 aacag 224  Q
    |||||    
T  166253 aacag 166257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 124; Significance: 7e-64; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 24 - 223
Target Start/End: Complemental strand, 25524 - 25325
Alignment:
Q  24 agtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtct 123  Q
    ||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||  ||| || |||| |||||||    
T  25524 agtagttaaccgcacagttgtagttgggcttgttttatcctggacgcggcgtggttgatagtctgtcttgcacaattttacgcagtgtcacgtaacgtct 25425  T
Q  124 taaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaaca 223  Q
    ||||||||| |||||  | ||||||||||||||||||||||||| | |||||||||||||||||||||||||||| | ||||| ||||||||| ||||||    
T  25424 taaagagagtgacctaattgtgactcaacctagtaacaacttcgatagataatagaatttggaaatccaaatacagcagtttgaaaatccaaagacaaca 25325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 29285 - 29209
Alignment:
Q  19 aatgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcac 96  Q
    |||||||||||||| || |||||| ||||| | ||| |||||||||| || |||||||||||||| | ||||||||||    
T  29285 aatgcagtagttaaccgcacagttatagttagacttattttatcctgaagacggcgtggttgatagt-tgtcttgcac 29209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 21 - 223
Target Start/End: Complemental strand, 35762 - 35560
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| || |||||||||| ||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||| || || |||||||||    
T  35762 tgcagtagttaaccgcacagttgtagctggacttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttggccagtgtcacgaaacg 35663  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatccaaatacaactgtttggaaatccaaaaaca 220  Q
    |||||||||||||| | ||||||| ||| ||||||||||||||||| ||  ||||||||||||||||||||||||||||| ||||| |||| |||||| |    
T  35662 tcttaaagagagcggcatggtcgtaacttaacctagtaacaacttcagtaaataatagaatttggaaatccaaatacaacagtttgaaaatgcaaaaata 35563  T
Q  221 aca 223  Q
    |||    
T  35562 aca 35560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 21 - 223
Target Start/End: Complemental strand, 83194 - 82991
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| || ||||||| || || ||||||||||||||||||||||| ||||||||| |||| |||||| |||||||||   || |||||||||    
T  83194 tgcagtagttaaccgcacagttgcagctgagcttgttttatcctggaggcggcatggttgatagtctgccttgcataattttgggtggtgtcacgaaacg 83095  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggataatagaatttggaaatcc-aaatacaactgtttggaaatccaaaaac 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||| || ||||||||| |||| |||||||||||||    
T  83094 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagaaaacagaatttggaaaaccaaaatacaacagtttagaaatccaaaaac 82995  T
Q  220 aaca 223  Q
    ||||    
T  82994 aaca 82991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 43 - 174
Target Start/End: Complemental strand, 4097 - 3966
Alignment:
Q  43 gtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtc 142  Q
    ||||||||||||||||||||||||||||||||||||||||  | ||||||||| || ||| ||||||||||  ||| ||||||||||||||||  |||||    
T  4097 gtagttgggcttgttttatcctggaggcggcgtggttgatggtatgtcttgcaaaaattttggcattgccataaaaagtcttaaagagagcgatatggtc 3998  T
Q  143 gtgactcaacctagtaacaacttcggtggata 174  Q
    ||||||||||||||||||||||||||| ||||    
T  3997 gtgactcaacctagtaacaacttcggtagata 3966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2020 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold2020
Description:

Target: scaffold2020; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 37 - 224
Target Start/End: Complemental strand, 483 - 282
Alignment:
Q  37 acagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgac 136  Q
    |||||||||| || ||||||||||||||||||||| ||||||||||| | |||||||||||| ||||| || ||||| ||||||||||||| | ||||||    
T  483 acagttgtagctgagcttgttttatcctggaggcgacgtggttgatagtgtgtcttgcacaactttggacaatgccatgaaacgtcttaaaaaaagcgac 384  T
Q  137 ctggtcgtgactcaacctagta---acaacttcggtggat-----------aatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaac 222  Q
     | |||||||||||||||||||   ||||||||||| |||           || ||||||| |||||| ||||||||| |||||||||||||||||||||    
T  383 atagtcgtgactcaacctagtaattacaacttcggtagatattctttttcaaaaagaatttcgaaatctaaatacaacagtttggaaatccaaaaacaac 284  T
Q  223 ag 224  Q
    ||    
T  283 ag 282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 37 - 224
Target Start/End: Original strand, 165012 - 165213
Alignment:
Q  37 acagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgac 136  Q
    |||||||||| || ||||||||||||||||||||| ||||||||||| | |||||||||||| ||||| || ||||| ||||||||||||| | ||||||    
T  165012 acagttgtagctgagcttgttttatcctggaggcgacgtggttgatagtgtgtcttgcacaactttggacaatgccatgaaacgtcttaaaaaaagcgac 165111  T
Q  137 ctggtcgtgactcaacctagta---acaacttcggtggat-----------aatagaatttggaaatccaaatacaactgtttggaaatccaaaaacaac 222  Q
     | |||||||||||||||||||   ||||||||||| |||           || ||||||| |||||| ||||||||| |||||||||||||||||||||    
T  165112 atagtcgtgactcaacctagtaattacaacttcggtagatattctttttcaaaaagaatttcgaaatctaaatacaacagtttggaaatccaaaaacaac 165211  T
Q  223 ag 224  Q
    ||    
T  165212 ag 165213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 21 - 162
Target Start/End: Complemental strand, 255945 - 255804
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| |  |||||||||| ||| |||||||||||||||||||||| | ||||||| | ||||||||||||||||||| | |||||||||||     
T  255945 tgcagtagttaaccacacagttgtagctggacttgttttatcctggaggcggcatagttgatagtatgtcttgcacaattttgggtagtgccacgaaacc 255846  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaa 162  Q
    |||||||||||| |||||||||||| || ||| |||||||||    
T  255845 tcttaaagagagtgacctggtcgtgtcttaacatagtaacaa 255804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 167
Target Start/End: Complemental strand, 2436 - 2291
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    ||||||||||||||  |||||||||  || | ||||||||| || |||||||||||||||||| ||||||||||||||||||   || || ||| |||||    
T  2436 tgcagtagttaatctcacagttgtacctgagtttgttttatactagaggcggcgtggttgata-tctgtcttgcacaattttaaacaatggcacaaaacg 2338  T
Q  121 tcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcg 167  Q
    | ||||||||| ||||||| || |||||||||||| |||||||||||    
T  2337 tattaaagagaacgacctgatcatgactcaacctaataacaacttcg 2291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 159
Target Start/End: Original strand, 171700 - 171820
Alignment:
Q  37 acagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgac 136  Q
    ||||||||||||||||| |||||||||| | | || ||||||||||| |||| ||||||||||||| |||| ||||||||||||||||||||||||||||    
T  171700 acagttgtagttgggct-gttttatcctag-gacgtcgtggttgatagtctg-cttgcacaattttaggcagtgccacgaaacgtcttaaagagagcgac 171796  T
Q  137 ctggtc-gtgactcaacctagtaa 159  Q
    || ||| | |||||| ||||||||    
T  171797 ctagtctgcgactcagcctagtaa 171820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 78 - 223
Target Start/End: Complemental strand, 15355 - 15197
Alignment:
Q  78 ttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtggat---- 173  Q
    |||||| ||||||||||||||||||| ||| ||| ||||||| |||||||  ||| ||  |||||||||||||||||||||||||||||||| |||        
T  15355 ttgatagtctgtcttgcacaattttgagcagtgctacgaaacatcttaaaaggagtgatatggtcgtgactcaacctagtaacaacttcggtagatattt 15256  T
Q  174 --------aatagaatttggaaatcc-aaatacaactgtttggaaatccaaaaacaaca 223  Q
            ||||||||||||||| || ||||||||| ||||| ||||||||||||||||    
T  15255 tcttaaaaaatagaatttggaaaaccaaaatacaacagtttgtaaatccaaaaacaaca 15197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 54 - 153
Target Start/End: Original strand, 2772 - 2870
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    ||||||||||||||| ||||||||||| || |||  ||||||||| || ||| | || ||||||||||||||||||| ||||||||||||||||||||||    
T  2772 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgtcacgaaacgtcttaaagagcgcgacctggtcgtgactcaacc 2870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 54 - 153
Target Start/End: Original strand, 10732 - 10830
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    ||||||||||||||| ||||||||||| || |||  ||||||||| || ||| | || ||||||||||||||||||| ||||||||||||||||||||||    
T  10732 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgtcacgaaacgtcttaaagagcgcgacctggtcgtgactcaacc 10830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 52; Significance: 6e-21; HSPs: 4)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 54 - 153
Target Start/End: Complemental strand, 1660 - 1562
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    ||||||||||||||| ||||||||||| || |||  ||||||||| || ||| | |||| ||||||||||||||||||||||||||||||||||| ||||    
T  1660 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgacttaacc 1562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 153
Target Start/End: Complemental strand, 7141 - 7043
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    ||||||||||||||| ||||||||||| || |||  ||||||||| || ||| | |||| |||||||||||||||||| |||||||||||| ||||||||    
T  7141 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-gggtagtgccgcgaaacgtcttaaagagaacgacctggtcgtaactcaacc 7043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 155486 - 155544
Alignment:
Q  22 gcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttg 80  Q
    |||||||||||||| |||||||||| ||  ||||||||||||| |||||||||||||||    
T  155486 gcagtagttaatcgcacagttgtagctgaacttgttttatcctagaggcggcgtggttg 155544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 146
Target Start/End: Original strand, 155552 - 155587
Alignment:
Q  111 ccacgaaacgtcttaaagagagcgacctggtcgtga 146  Q
    ||||||||||||||||||||| ||||||||||||||    
T  155552 ccacgaaacgtcttaaagagaacgacctggtcgtga 155587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 54 - 159
Target Start/End: Complemental strand, 37105 - 37001
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||| ||  | |||| |||||||||||||||| |||||||||||||||||||| ||    
T  37105 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccc 37007  T
Q  154 tagtaa 159  Q
     |||||    
T  37006 cagtaa 37001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 13397 - 13265
Alignment:
Q  24 agtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtct 123  Q
    ||||||||| || |||||||||||||  |||||| |||| |||||||  | ||||||||| |||  |||| ||||||||||||| || ||| ||||||||    
T  13397 agtagttaaccgcacagttgtagttgaacttgttgtatcttggaggcaccatggttgatagtctaccttgaacaattttgggcagtgtcaccaaacgtct 13298  T
Q  124 taaagagagcgacctggtcgtgactcaacctag 156  Q
    |||||| || ||| || ||| ||||| ||||||    
T  13297 taaagaaagtgacttgatcgggactccacctag 13265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 3153 - 3058
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||  ||  | |||| |||||||||||||||||||||||||||||||||||||    
T  3153 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 3058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 150
Target Start/End: Original strand, 81382 - 81477
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||  ||  | |||| |||||||||||||||||||||||||||||||||||||    
T  81382 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 81477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 150
Target Start/End: Original strand, 9208 - 9303
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  9208 tgttttatcctggagacggcgcggttgctagtcttccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 9303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 150
Target Start/End: Original strand, 13740 - 13835
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  13740 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 13835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 159
Target Start/End: Original strand, 19252 - 19302
Alignment:
Q  109 tgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaa 159  Q
    |||| |||||||||||||||| |||||| ||||||||||||| || |||||    
T  19252 tgccgcgaaacgtcttaaagaaagcgacatggtcgtgactcaccccagtaa 19302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 153
Target Start/End: Original strand, 34023 - 34067
Alignment:
Q  109 tgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 153  Q
    |||| ||||||||||||||||||||||||||||||||||||||||    
T  34023 tgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacc 34067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 31640 - 31545
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  31640 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 31545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 26468 - 26373
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||  ||  | |||| ||||||||||||||||||||||| || |||| |||||    
T  26468 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacttgatcgtaactca 26373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 3658 - 3563
Alignment:
Q  54 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 150  Q
    ||||||||||||||  ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  3658 tgttttatcctggaaacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 3563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1050 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1050
Description:

Target: scaffold1050; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 138
Target Start/End: Complemental strand, 1268 - 1151
Alignment:
Q  21 tgcagtagttaatcgaacagttgtagttgggcttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttgggcattgccacgaaacg 120  Q
    |||||||||||| || ||||| |||| ||  ||||||||  ||||||||| |||||||| ||| || | |||||| ||||||| ||| || |||  ||||    
T  1268 tgcagtagttaaccgcacagtcgtagctgaacttgtttttgcctggaggcagcgtggtttatagtccgccttgcataattttgtgcaatgtcacagaacg 1169  T
Q  121 tcttaaagagagcgacct 138  Q
    ||||||| ||||| ||||    
T  1168 tcttaaatagagcaacct 1151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 158
Target Start/End: Original strand, 1291 - 1329
Alignment:
Q  120 gtcttaaagagagcgacctggtcgtgactcaacctagta 158  Q
    |||||||||| ||||||||||||||||||||||| ||||    
T  1291 gtcttaaagaaagcgacctggtcgtgactcaacccagta 1329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University