View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16525_low_13 (Length: 203)
Name: NF16525_low_13
Description: NF16525
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16525_low_13 |
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Alignment Details
Target: chr4 (Bit Score: 179; Significance: 8e-97; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 179; E-Value: 8e-97
Query Start/End: Original strand, 3 - 189
Target Start/End: Original strand, 43395896 - 43396082
Alignment:
| Q |
3 |
aacaataacaataacaatagccccagtaacacgccaccaccttctccagattctctccctccgcgtcagccacatcctcgaaaatcccgcttccaatctt |
102 |
Q |
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| T |
43395896 |
aacaataacaataacaatagcccaagtaacacgccaccaccttctccagattctctccctccgcgtcagccacatcctcgaaaatcccgcttccaatctt |
43395995 |
T |
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| Q |
103 |
caccctctcctgcacctcagccgcagggaatccaagctcctaattataactccagaagaactttcaagccttctgcactgtctgaac |
189 |
Q |
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|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43395996 |
caccctctcctgcacctcagccacagggaatccaagctcctaattataactccagaagaactttcaagccttctgcactgtctgaac |
43396082 |
T |
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