View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16526_low_6 (Length: 276)
Name: NF16526_low_6
Description: NF16526
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16526_low_6 |
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Alignment Details
Target: chr6 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 14 - 262
Target Start/End: Complemental strand, 20842253 - 20842005
Alignment:
| Q |
14 |
aggcgaaaattagggatgcgatgttttttcaagtagctagtgatggttggaagagttatggtaatagtagtagtaattataataataataggagtttgta |
113 |
Q |
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| T |
20842253 |
aggcgaaaattagggatgcgatgttttttcaagtagctagtgatggttggaagagttatggtaatagtagtagtaattttaataataataggagtttgta |
20842154 |
T |
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| Q |
114 |
tggtttgtgttgtggtggagagagtttggttaagtttatggtgaatctaccaaatgggagtagtgtttttgaaaaggcggtgtttaccggcggaggagtt |
213 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20842153 |
tggtttgtgttgtggtggtgagagtttggttaagtttatggtgaatctaccaaatgggagtagtgtttttgaaaaggcggtgtttaccggcggaggagtt |
20842054 |
T |
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| Q |
214 |
gtgaattcgaagtatgctgaggaggttttgtgggagactgtgactggtg |
262 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20842053 |
gtgaattcgaagtatgctgaggaggttttgtgggagactgtgactggtg |
20842005 |
T |
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