View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16526_low_8 (Length: 237)
Name: NF16526_low_8
Description: NF16526
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16526_low_8 |
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Alignment Details
Target: chr4 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 24544783 - 24544568
Alignment:
| Q |
1 |
attgtttcataattt-gatatttaccataattgttcccttcaaccttggcttattgcttaagttcaatgtacctcgtttttcttgcaactattggattgt |
99 |
Q |
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| T |
24544783 |
attgtttcataattttgatatttaccataattgttcccttcaaccttggcttattgcttaagttcaatgtacctcgtttttcttgcaattattgaattct |
24544684 |
T |
|
| Q |
100 |
tccatatgattcacgtaattatttgtagtggcaaaatcatctgttcacgacgcttgaaaaagacaagaacgtgtatacaattaaaagtgcatttaatata |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24544683 |
tccatatgattcacgtaattatttgtagtggcaaaatcatctgttcacgacgcttgaaaaagacaagaacgtgtatacaattaaaagtgcatttaatata |
24544584 |
T |
|
| Q |
200 |
aacctctcaaagaagg |
215 |
Q |
| |
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|||||||||||||||| |
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| T |
24544583 |
aacctctcaaagaagg |
24544568 |
T |
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