View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16527_high_15 (Length: 264)
Name: NF16527_high_15
Description: NF16527
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16527_high_15 |
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Alignment Details
Target: chr2 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 42823031 - 42822785
Alignment:
| Q |
1 |
taagtcctctttaccaatatctatctaatttgggccattcattttgtattgcatttaatttgggtgtccaagatattctcatattcaatgaatagcagat |
100 |
Q |
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| T |
42823031 |
taagtcctctttaccaatatctatctaatttgggccattcattttgtattgcatttaatttgggtgtccaagatattctcatattcaatgaatatcagat |
42822932 |
T |
|
| Q |
101 |
tttagttacgttactatttattatggtacatctttggagtgttttacactgcttcttttgaaagtgacaagaaatagatccaattttaatttgtagaaat |
200 |
Q |
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| T |
42822931 |
tttagttacgttagtatttattatggtacatctttggagtgttttacactgcttcttttgaaagtgacaagaaatagatccaattttaatttgtagaaat |
42822832 |
T |
|
| Q |
201 |
ttgttatgaagaggccaatttgaagaccttaattttcatctcacaag |
247 |
Q |
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|||||||||||||||||||||||||||||||||||| |||| ||||| |
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| T |
42822831 |
ttgttatgaagaggccaatttgaagaccttaattttaatctaacaag |
42822785 |
T |
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