View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16527_high_18 (Length: 243)
Name: NF16527_high_18
Description: NF16527
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16527_high_18 |
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Alignment Details
Target: chr7 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 19 - 241
Target Start/End: Original strand, 42862534 - 42862756
Alignment:
| Q |
19 |
tcgtcatggtatgaatatgattcataaacaccatgctttgctcttttacccttcacaacaaatatcttactccctctgttttcttttctatcatgtttcc |
118 |
Q |
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| T |
42862534 |
tcgtcatggtatgaatatgattcataaacaccatgctttgctcttttacccttcacaacaaatatcttactccctctgttttcttttctatgatgtttcc |
42862633 |
T |
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| Q |
119 |
ttttgcactcccttctccaccatgtgggatttggcttttgttttacaaatcctttgataggtgtttgttttaatagcacaaattgtttttaacatgtttg |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42862634 |
ttttgcactcccttctccaccatgtgggatttggcttttgttttacaaatcctttgataggtgtttgttttaatagcacaaattgtttttaacatgtttg |
42862733 |
T |
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| Q |
219 |
tgttgccattgaaaattatgctt |
241 |
Q |
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||||||||||||||||||||||| |
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| T |
42862734 |
tgttgccattgaaaattatgctt |
42862756 |
T |
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