View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16527_high_21 (Length: 234)
Name: NF16527_high_21
Description: NF16527
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16527_high_21 |
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Alignment Details
Target: chr8 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 36364719 - 36364546
Alignment:
| Q |
1 |
tggggtgtattgttgtgtgttaagtgcgagttgaagtttcaaaagcagatgttgaactaacatataagtaaagaaattcatatacataatgctttaagat |
100 |
Q |
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| T |
36364719 |
tggggtgtattgttgtgtgttaagtgcgagttgaagtttcaaaagcagatgttgaactaa-----------agaaattcatatacataatgtcttaagat |
36364631 |
T |
|
| Q |
101 |
tttgagtggtgatttgaatctaaatcacttgtatatgacagttcttaattcaacatgatgatcctcatgcatctcttaagactca |
185 |
Q |
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| T |
36364630 |
tttgagtggtgatttgaatctaaatcacttatatatgacagttcttgattcaacatgatgatcctcatgcatctcttaagactca |
36364546 |
T |
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