View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16527_low_34 (Length: 211)

Name: NF16527_low_34
Description: NF16527
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16527_low_34
NF16527_low_34
[»] chr3 (45 HSPs)
chr3 (16-200)||(9832467-9832651)
chr3 (44-91)||(10499140-10499187)
chr3 (45-87)||(8051213-8051255)
chr3 (43-91)||(26871535-26871583)
chr3 (44-92)||(31520635-31520683)
chr3 (46-92)||(16991542-16991588)
chr3 (46-90)||(3054994-3055038)
chr3 (94-146)||(8075091-8075143)
chr3 (44-92)||(27093391-27093439)
chr3 (44-92)||(40268487-40268535)
chr3 (48-92)||(42799777-42799821)
chr3 (53-92)||(2667869-2667908)
chr3 (45-92)||(36720380-36720427)
chr3 (45-92)||(46518627-46518674)
chr3 (46-92)||(4222141-4222187)
chr3 (46-92)||(16354922-16354968)
chr3 (46-80)||(24459990-24460024)
chr3 (46-92)||(27923073-27923119)
chr3 (46-92)||(31789000-31789046)
chr3 (46-87)||(14186648-14186689)
chr3 (46-82)||(1360921-1360957)
chr3 (44-92)||(5499437-5499485)
chr3 (44-80)||(26988994-26989030)
chr3 (46-92)||(10445169-10445216)
chr3 (46-85)||(11092206-11092245)
chr3 (53-92)||(17554778-17554817)
chr3 (45-92)||(18319198-18319245)
chr3 (45-92)||(30311305-30311352)
chr3 (57-92)||(32651468-32651503)
chr3 (46-92)||(203090-203136)
chr3 (54-92)||(12761520-12761558)
chr3 (46-92)||(14339610-14339656)
chr3 (46-92)||(21960551-21960597)
chr3 (46-92)||(26481927-26481973)
chr3 (49-91)||(30510230-30510272)
chr3 (46-92)||(47810774-47810820)
chr3 (46-92)||(51903908-51903954)
chr3 (46-92)||(53863897-53863943)
chr3 (46-92)||(53956384-53956430)
chr3 (49-90)||(15034348-15034389)
chr3 (47-92)||(18316528-18316573)
chr3 (46-91)||(31510749-31510794)
chr3 (46-78)||(2597264-2597296)
chr3 (44-92)||(32638943-32638991)
chr3 (46-82)||(47079701-47079737)
[»] chr8 (37 HSPs)
chr8 (39-92)||(16852333-16852386)
chr8 (46-92)||(968362-968408)
chr8 (46-92)||(18540298-18540344)
chr8 (48-92)||(2203494-2203538)
chr8 (48-92)||(3624582-3624626)
chr8 (45-92)||(8484998-8485045)
chr8 (45-92)||(19703517-19703564)
chr8 (45-92)||(22268963-22269010)
chr8 (46-89)||(23874415-23874458)
chr8 (45-92)||(28783059-28783106)
chr8 (46-92)||(6530807-6530853)
chr8 (46-92)||(20994488-20994534)
chr8 (46-92)||(26688865-26688911)
chr8 (46-92)||(29431011-29431057)
chr8 (47-92)||(29858079-29858124)
chr8 (45-89)||(5264543-5264587)
chr8 (45-92)||(44780144-44780191)
chr8 (46-92)||(6436585-6436631)
chr8 (42-92)||(12988424-12988474)
chr8 (46-92)||(40591732-40591778)
chr8 (46-91)||(32157191-32157236)
chr8 (46-91)||(34986102-34986147)
chr8 (45-92)||(4830486-4830533)
chr8 (45-92)||(5801046-5801093)
chr8 (45-79)||(3826820-3826854)
chr8 (46-92)||(6569801-6569847)
chr8 (46-92)||(23361679-23361725)
chr8 (45-87)||(27121009-27121051)
chr8 (46-92)||(30483914-30483960)
chr8 (45-78)||(45527567-45527600)
chr8 (102-146)||(11819844-11819888)
chr8 (45-85)||(18897165-18897205)
chr8 (45-85)||(28566104-28566144)
chr8 (45-85)||(28573727-28573767)
chr8 (102-146)||(33727837-33727881)
chr8 (44-80)||(36042979-36043015)
chr8 (106-146)||(44780078-44780118)
[»] chr5 (28 HSPs)
chr5 (46-91)||(21589288-21589333)
chr5 (46-92)||(21549167-21549213)
chr5 (46-93)||(7918498-7918545)
chr5 (45-92)||(30109338-30109385)
chr5 (45-92)||(30883228-30883275)
chr5 (46-92)||(16457810-16457856)
chr5 (45-92)||(34984805-34984852)
chr5 (46-92)||(8278305-8278351)
chr5 (46-92)||(16773807-16773853)
chr5 (46-92)||(25627057-25627103)
chr5 (45-91)||(26078082-26078128)
chr5 (46-92)||(29075781-29075827)
chr5 (102-146)||(28285320-28285364)
chr5 (46-85)||(892511-892550)
chr5 (46-93)||(3252318-3252365)
chr5 (46-93)||(5390879-5390926)
chr5 (45-92)||(14285160-14285207)
chr5 (45-92)||(22737081-22737128)
chr5 (45-92)||(26598523-26598570)
chr5 (45-92)||(29692416-29692463)
chr5 (46-92)||(14495835-14495881)
chr5 (45-83)||(16436617-16436655)
chr5 (46-92)||(19373239-19373285)
chr5 (113-146)||(18206610-18206643)
chr5 (43-92)||(22020892-22020941)
chr5 (46-91)||(31669055-31669100)
chr5 (46-86)||(3915034-3915074)
chr5 (46-78)||(32670671-32670703)
[»] chr4 (42 HSPs)
chr4 (43-92)||(37720244-37720293)
chr4 (46-91)||(55427231-55427276)
chr4 (45-92)||(51250552-51250599)
chr4 (46-92)||(19238607-19238653)
chr4 (46-92)||(37109381-37109427)
chr4 (44-92)||(29195093-29195141)
chr4 (45-92)||(27965540-27965587)
chr4 (46-92)||(9241055-9241101)
chr4 (40-92)||(46545705-46545757)
chr4 (46-92)||(1730519-1730565)
chr4 (46-92)||(37443702-37443748)
chr4 (45-94)||(24827824-24827873)
chr4 (43-92)||(40284016-40284065)
chr4 (102-146)||(8030168-8030212)
chr4 (49-92)||(7292828-7292871)
chr4 (45-92)||(7949484-7949531)
chr4 (45-92)||(19680818-19680865)
chr4 (45-92)||(21344816-21344863)
chr4 (46-92)||(37274489-37274536)
chr4 (46-85)||(37455569-37455608)
chr4 (49-92)||(39030143-39030186)
chr4 (46-85)||(42281270-42281309)
chr4 (53-92)||(49576924-49576963)
chr4 (46-92)||(13496241-13496287)
chr4 (50-92)||(13901746-13901788)
chr4 (46-92)||(15180741-15180787)
chr4 (46-92)||(17618281-17618327)
chr4 (50-92)||(24234649-24234691)
chr4 (46-92)||(28635696-28635742)
chr4 (46-92)||(31759688-31759734)
chr4 (50-92)||(37980177-37980219)
chr4 (46-92)||(38206155-38206201)
chr4 (46-92)||(56409951-56409997)
chr4 (46-92)||(2622425-2622475)
chr4 (45-90)||(6606057-6606102)
chr4 (46-83)||(19229246-19229283)
chr4 (46-91)||(47044717-47044762)
chr4 (45-92)||(2185062-2185110)
chr4 (102-146)||(9693462-9693506)
chr4 (102-146)||(28635764-28635808)
chr4 (46-90)||(33619206-33619250)
chr4 (102-146)||(51250486-51250530)
[»] chr7 (47 HSPs)
chr7 (44-92)||(41487360-41487408)
chr7 (45-92)||(30579334-30579381)
chr7 (46-92)||(25021365-25021411)
chr7 (46-92)||(26459440-26459486)
chr7 (46-92)||(42836031-42836077)
chr7 (46-91)||(39631844-39631889)
chr7 (46-94)||(22932739-22932787)
chr7 (49-92)||(15905703-15905746)
chr7 (46-92)||(7801180-7801226)
chr7 (46-92)||(22760863-22760909)
chr7 (46-92)||(23301632-23301678)
chr7 (46-92)||(39499749-39499795)
chr7 (46-92)||(43590907-43590953)
chr7 (46-92)||(48771938-48771984)
chr7 (46-91)||(30442488-30442533)
chr7 (45-89)||(11720993-11721037)
chr7 (44-92)||(43215182-43215230)
chr7 (45-92)||(2446307-2446354)
chr7 (46-85)||(5273627-5273666)
chr7 (45-92)||(23552117-23552164)
chr7 (49-92)||(45976953-45976996)
chr7 (46-92)||(5579264-5579310)
chr7 (46-92)||(19553454-19553499)
chr7 (46-92)||(25956322-25956368)
chr7 (46-92)||(45559200-45559246)
chr7 (46-92)||(48125204-48125250)
chr7 (44-85)||(35328911-35328952)
chr7 (48-92)||(21854550-21854594)
chr7 (46-86)||(26199509-26199549)
chr7 (102-146)||(33181174-33181218)
chr7 (45-85)||(38374636-38374676)
chr7 (42-90)||(43663127-43663175)
chr7 (46-81)||(6426093-6426128)
chr7 (49-92)||(20952179-20952222)
chr7 (46-81)||(31835192-31835227)
chr7 (46-84)||(3280523-3280561)
chr7 (46-92)||(20335861-20335907)
chr7 (46-92)||(24513797-24513843)
chr7 (46-92)||(25590611-25590657)
chr7 (46-92)||(27776172-27776218)
chr7 (46-92)||(33869475-33869521)
chr7 (43-80)||(22702237-22702274)
chr7 (46-79)||(48039690-48039723)
chr7 (46-82)||(4161288-4161324)
chr7 (46-82)||(15137553-15137589)
chr7 (48-92)||(44628213-44628257)
chr7 (102-146)||(48983697-48983741)
[»] chr6 (23 HSPs)
chr6 (44-92)||(33549102-33549150)
chr6 (45-92)||(12188333-12188380)
chr6 (45-92)||(12234537-12234584)
chr6 (45-92)||(31623021-31623068)
chr6 (46-92)||(21418470-21418516)
chr6 (45-92)||(10338204-10338251)
chr6 (49-92)||(13441053-13441096)
chr6 (50-88)||(6776641-6776679)
chr6 (46-92)||(14557962-14558008)
chr6 (46-92)||(30127400-30127446)
chr6 (44-92)||(22701-22749)
chr6 (46-94)||(14278139-14278186)
chr6 (102-146)||(20213109-20213153)
chr6 (102-146)||(22107132-22107176)
chr6 (48-92)||(32613170-32613214)
chr6 (103-146)||(14199911-14199954)
chr6 (46-85)||(28028530-28028569)
chr6 (46-92)||(24641220-24641266)
chr6 (46-91)||(1056716-1056761)
chr6 (47-92)||(6758452-6758497)
chr6 (52-85)||(34444809-34444842)
chr6 (55-91)||(11597904-11597940)
chr6 (43-91)||(24507567-24507615)
[»] chr2 (31 HSPs)
chr2 (45-92)||(37480074-37480121)
chr2 (45-92)||(42602553-42602600)
chr2 (46-92)||(42327425-42327471)
chr2 (43-92)||(7799065-7799114)
chr2 (45-92)||(29503270-29503317)
chr2 (45-92)||(39714991-39715038)
chr2 (46-92)||(23052553-23052599)
chr2 (47-89)||(37756004-37756046)
chr2 (46-92)||(42922414-42922460)
chr2 (44-92)||(25931004-25931052)
chr2 (45-92)||(1729815-1729862)
chr2 (45-92)||(21213768-21213815)
chr2 (45-92)||(29197406-29197453)
chr2 (46-92)||(342395-342441)
chr2 (46-92)||(32106566-32106612)
chr2 (45-90)||(3697431-3697476)
chr2 (47-92)||(16918608-16918653)
chr2 (46-91)||(40416421-40416466)
chr2 (48-92)||(12086159-12086203)
chr2 (45-92)||(19322767-19322814)
chr2 (49-92)||(30359657-30359700)
chr2 (46-92)||(11062360-11062406)
chr2 (46-92)||(16381684-16381730)
chr2 (46-92)||(16525178-16525224)
chr2 (46-92)||(18825341-18825387)
chr2 (46-92)||(19016031-19016077)
chr2 (50-92)||(24191842-24191884)
chr2 (46-92)||(26482093-26482139)
chr2 (45-86)||(30808683-30808724)
chr2 (102-146)||(21195640-21195684)
chr2 (46-86)||(24144676-24144716)
[»] chr1 (39 HSPs)
chr1 (45-92)||(40257398-40257445)
chr1 (46-92)||(9165225-9165271)
chr1 (45-92)||(36371469-36371516)
chr1 (41-92)||(41508826-41508877)
chr1 (46-92)||(15581171-15581217)
chr1 (46-92)||(16170008-16170054)
chr1 (46-92)||(31794294-31794340)
chr1 (46-92)||(52116811-52116857)
chr1 (47-92)||(44126396-44126441)
chr1 (46-82)||(19528367-19528403)
chr1 (44-92)||(37046983-37047031)
chr1 (45-92)||(4566547-4566594)
chr1 (41-92)||(51013156-51013207)
chr1 (46-92)||(952511-952557)
chr1 (46-92)||(21694446-21694492)
chr1 (46-92)||(24857860-24857906)
chr1 (46-91)||(1690108-1690153)
chr1 (45-90)||(21547512-21547557)
chr1 (46-91)||(37310007-37310052)
chr1 (102-146)||(6122862-6122906)
chr1 (50-86)||(17745292-17745328)
chr1 (48-92)||(33700803-33700847)
chr1 (44-92)||(34228872-34228920)
chr1 (44-92)||(39012289-39012337)
chr1 (95-146)||(3799967-3800018)
chr1 (45-92)||(8177212-8177259)
chr1 (45-92)||(45235409-45235456)
chr1 (46-92)||(50901581-50901628)
chr1 (52-90)||(48400178-48400216)
chr1 (46-91)||(10526823-10526868)
chr1 (56-89)||(28022158-28022191)
chr1 (43-92)||(29817672-29817721)
chr1 (46-91)||(30689012-30689057)
chr1 (43-92)||(51814491-51814540)
chr1 (46-86)||(2219972-2220012)
chr1 (44-92)||(26232416-26232464)
chr1 (102-146)||(31794228-31794272)
chr1 (46-86)||(37400274-37400314)
chr1 (102-146)||(44961833-44961877)
[»] scaffold0258 (1 HSPs)
scaffold0258 (46-92)||(15353-15399)
[»] scaffold0417 (1 HSPs)
scaffold0417 (45-94)||(10218-10267)
[»] scaffold0002 (1 HSPs)
scaffold0002 (49-92)||(95001-95044)
[»] scaffold0070 (1 HSPs)
scaffold0070 (49-91)||(38933-38975)
[»] scaffold0032 (1 HSPs)
scaffold0032 (46-92)||(112282-112328)
[»] scaffold0172 (2 HSPs)
scaffold0172 (45-94)||(32797-32846)
scaffold0172 (45-82)||(15817-15854)
[»] scaffold0955 (1 HSPs)
scaffold0955 (49-85)||(3466-3502)
[»] scaffold0299 (1 HSPs)
scaffold0299 (52-92)||(11534-11574)
[»] scaffold0101 (1 HSPs)
scaffold0101 (53-92)||(43362-43401)
[»] scaffold1367 (1 HSPs)
scaffold1367 (52-89)||(873-910)
[»] scaffold0260 (1 HSPs)
scaffold0260 (46-83)||(15360-15397)
[»] scaffold0118 (1 HSPs)
scaffold0118 (46-79)||(41676-41709)
[»] scaffold0086 (1 HSPs)
scaffold0086 (46-91)||(47382-47427)
[»] scaffold0056 (1 HSPs)
scaffold0056 (46-91)||(61679-61724)
[»] scaffold0517 (1 HSPs)
scaffold0517 (46-86)||(7762-7802)
[»] scaffold0337 (1 HSPs)
scaffold0337 (43-91)||(1750-1798)
[»] scaffold0300 (1 HSPs)
scaffold0300 (102-146)||(4408-4452)
[»] scaffold0065 (1 HSPs)
scaffold0065 (43-91)||(12186-12234)
[»] scaffold0021 (1 HSPs)
scaffold0021 (52-92)||(106054-106094)


Alignment Details
Target: chr3 (Bit Score: 146; Significance: 4e-77; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 16 - 200
Target Start/End: Original strand, 9832467 - 9832651
Alignment:
Q  16 gtgataacttatgtaaacaagaaatgttaaaacccacttgggttggcctggtggtattggcttgggacctgggagtgcggtttcatgttcgattccttct 115  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9832467 gtgagaacttatgtaaacaagaaatgttaaaacccacttgggttggcccggtggtattggcttgggacctgggagtgcggtttcatgttcgattccttct 9832566  T
Q  116 agtgccaatttgggtggggtaatttagcttcctnnnnnnnnntatacttatgaaatgtccataagttgtttttagcttcatttca 200  Q
    |||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||| |||||    
T  9832567 agtgccaatttgggtggggtaatttagcttcctaaaaaaaaatatacttatgaaatgtccataagttgtttttagcttcttttca 9832651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 44 - 91
Target Start/End: Complemental strand, 10499187 - 10499140
Alignment:
Q  44 aaaacccacttgggttggcctggtggtattggcttgggacctgggagt 91  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  10499187 aaaacccacttgggttggcctggtggtattggcttgggatctgggagt 10499140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 45 - 87
Target Start/End: Original strand, 8051213 - 8051255
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctgg 87  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  8051213 aaacccacttgggttggcctggtggtattggcttgggacctgg 8051255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 26871583 - 26871535
Alignment:
Q  43 taaaacccacttgggttggcctggtggtattggcttgggacctgggagt 91  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||    
T  26871583 taaaacccacttgggttggcctggtggtgttggcttgggaccttggagt 26871535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 31520683 - 31520635
Alignment:
Q  44 aaaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||    
T  31520683 aaaacccacttgggttggcctggtggcattggcttgggatctgggagtg 31520635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 16991542 - 16991588
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||    
T  16991542 aacccatttgggttggcctggtggtattggcttgggatctgggagtg 16991588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 90
Target Start/End: Original strand, 3054994 - 3055038
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggag 90  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||    
T  3054994 aacccacttgggttggcctggtggtgttggcttgggaccttggag 3055038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 8075143 - 8075091
Alignment:
Q  94 ggtttcatgttcgattccttctagtgccaatttgggtggggtaatttagcttc 146  Q
    ||||||| |||||||||| ||||||| ||||||||||||| ||||||||||||    
T  8075143 ggtttcaggttcgattccctctagtgtcaatttgggtgggctaatttagcttc 8075091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 27093439 - 27093391
Alignment:
Q  44 aaaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||||||| ||||||||||||||| || ||||||||    
T  27093439 aaaacccacttgggttggcctagtggtattggcttggaacttgggagtg 27093391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 40268487 - 40268535
Alignment:
Q  44 aaaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||||| |||||||||| |||||||||||||| ||||||    
T  40268487 aaaacccacttgggtttgcctggtggtgttggcttgggaccttggagtg 40268535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 42799821 - 42799777
Alignment:
Q  48 cccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||    
T  42799821 cccacttgggttggcctggtggtgttggcttgggaccttggagtg 42799777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 92
Target Start/End: Original strand, 2667869 - 2667908
Alignment:
Q  53 ttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  2667869 ttgggttggcctggtggtattggcttgggatctgggagtg 2667908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 36720380 - 36720427
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||| ||||||||||||||||||||  ||||||||    
T  36720380 aaacccacttgggttggtctggtggtattggcttgggatatgggagtg 36720427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 46518627 - 46518674
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||||||| | ||||||||||||||||| |||||||||    
T  46518627 aaacccacttgggttggcatagtggtattggcttgggatctgggagtg 46518674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 4222141 - 4222187
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||| | ||||||||||||||||| |||||||||    
T  4222141 aacccacttgggttggcttagtggtattggcttgggatctgggagtg 4222187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 16354968 - 16354922
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||||| ||||||||||||||| ||||| |||||    
T  16354968 aacccacttgggttggcctagtggtattggcttggaacctgtgagtg 16354922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 46 - 80
Target Start/End: Original strand, 24459990 - 24460024
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgg 80  Q
    |||||||||||||||||||||||||||||||||||    
T  24459990 aacccacttgggttggcctggtggtattggcttgg 24460024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 27923119 - 27923073
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||| |||||||||||||||||||||||||||| ||| ||||    
T  27923119 aacccacttaggttggcctggtggtattggcttgggacatggaagtg 27923073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 31789046 - 31789000
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||||| ||| ||||||||||||| |||||||||    
T  31789046 aacccacttgggttggcctagtgttattggcttgggatctgggagtg 31789000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 14186648 - 14186689
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgg 87  Q
    ||||||||||||||||||| ||||||||| ||||||||||||    
T  14186648 aacccacttgggttggcctagtggtattgtcttgggacctgg 14186689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 82
Target Start/End: Original strand, 1360921 - 1360957
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttggga 82  Q
    ||||||||||||||||||||||| |||||||||||||    
T  1360921 aacccacttgggttggcctggtgttattggcttggga 1360957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 5499485 - 5499437
Alignment:
Q  44 aaaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||||||||||||||||| |||| || ||| |||||    
T  5499485 aaaacccacttgggttggcctggtggtattgacttgagatctgagagtg 5499437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 80
Target Start/End: Original strand, 26988994 - 26989030
Alignment:
Q  44 aaaacccacttgggttggcctggtggtattggcttgg 80  Q
    ||||||||||||||||||||| |||||||||||||||    
T  26988994 aaaacccacttgggttggcctagtggtattggcttgg 26989030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 10445216 - 10445169
Alignment:
Q  46 aacccacttgggttggcctggtggta-ttggcttgggacctgggagtg 92  Q
    ||||||||||||||||||| |||| | |||||||||||||||||||||    
T  10445216 aacccacttgggttggcctagtggcaattggcttgggacctgggagtg 10445169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 11092245 - 11092206
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacct 85  Q
    ||||||||||||||||||| ||||| ||||||||||||||    
T  11092245 aacccacttgggttggcctagtggtgttggcttgggacct 11092206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 92
Target Start/End: Original strand, 17554778 - 17554817
Alignment:
Q  53 ttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||  |||||||||||||||||||||||||||||    
T  17554778 ttgggttggtttggtggtattggcttgggacctgggagtg 17554817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 18319245 - 18319198
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||| |||| ||||||| |||||||||||| ||||||||||||||||    
T  18319245 aaacctacttaggttggcttggtggtattggtttgggacctgggagtg 18319198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 30311305 - 30311352
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||| ||||||||||| ||||||| ||||||||| |||||||||    
T  30311305 aaacccacctgggttggcctagtggtataggcttgggatctgggagtg 30311352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 92
Target Start/End: Complemental strand, 32651503 - 32651468
Alignment:
Q  57 gttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||| |||||||||||||||||||||||||||    
T  32651503 gttggcctagtggtattggcttgggacctgggagtg 32651468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 203090 - 203136
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||||| ||||||||| ||||||| | |||||||    
T  203090 aacccacttgggttggcctagtggtattgacttgggatcagggagtg 203136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 92
Target Start/End: Original strand, 12761520 - 12761558
Alignment:
Q  54 tgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||| |||||||||||| |||||||||||||||||    
T  12761520 tgggttggtctggtggtattgacttgggacctgggagtg 12761558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 14339610 - 14339656
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||| |||| |||||||||||||||||||||||||  ||||||||    
T  14339610 aacccagttggattggcctggtggtattggcttgggatttgggagtg 14339656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 21960551 - 21960597
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||| ||||||||  |||||||||||||||||||||||| |||||    
T  21960551 aacccaattgggttgcgctggtggtattggcttgggacctgagagtg 21960597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 26481927 - 26481973
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||| || |||||||| |||||||||||||| |||||    
T  26481927 aacccacttgggttagcttggtggtaatggcttgggacctgagagtg 26481973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 91
Target Start/End: Complemental strand, 30510272 - 30510230
Alignment:
Q  49 ccacttgggttggcctggtggtattggcttgggacctgggagt 91  Q
    |||||||||||| |||||||||| ||||||||||||| |||||    
T  30510272 ccacttgggttgtcctggtggtactggcttgggacctaggagt 30510230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 47810820 - 47810774
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||||| |||||||||||||||| || | ||||||||    
T  47810820 aacccacttgggttggtctggtggtattggctttggtcttgggagtg 47810774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 51903954 - 51903908
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||| ||||||| |||| |||||||||||||||| |||||||||    
T  51903954 aacccacctgggttgacctgttggtattggcttgggatctgggagtg 51903908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 53863943 - 53863897
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||| ||||||| | |||||||||||||| ||||||    
T  53863943 aacccacttgggttgtcctggtgatgttggcttgggaccttggagtg 53863897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 53956384 - 53956430
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||| |||| ||| |||||||||||||| |||||||    
T  53956384 aacccacttgggttgtcctgatggcattggcttgggacccgggagtg 53956430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 49 - 90
Target Start/End: Original strand, 15034348 - 15034389
Alignment:
Q  49 ccacttgggttggcctggtggtattggcttgggacctgggag 90  Q
    |||||||||||||||||||||| ||| |||||||||| ||||    
T  15034348 ccacttgggttggcctggtggtgttgccttgggaccttggag 15034389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 18316573 - 18316528
Alignment:
Q  47 acccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||| ||||||||  ||||||||||||| ||||||    
T  18316573 acccacttgggttggtctggtggtgctggcttgggaccttggagtg 18316528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 91
Target Start/End: Complemental strand, 31510794 - 31510749
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagt 91  Q
    ||||||||| |||||| |||||||||||| |||||||| |||||||    
T  31510794 aacccacttaggttggtctggtggtattgacttgggacttgggagt 31510749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 78
Target Start/End: Complemental strand, 2597296 - 2597264
Alignment:
Q  46 aacccacttgggttggcctggtggtattggctt 78  Q
    |||||||||||||||| ||||||||||||||||    
T  2597296 aacccacttgggttggtctggtggtattggctt 2597264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 32638943 - 32638991
Alignment:
Q  44 aaaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||| ||||||||  |||||||||||||||||| | |||||||||    
T  32638943 aaaacccatttgggttgttctggtggtattggcttggaaactgggagtg 32638991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 82
Target Start/End: Original strand, 47079701 - 47079737
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttggga 82  Q
    |||||||||||||||| |||||||| |||||||||||    
T  47079701 aacccacttgggttggtctggtggtgttggcttggga 47079737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 2e-17; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 92
Target Start/End: Original strand, 16852333 - 16852386
Alignment:
Q  39 atgttaaaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  16852333 atgtttaaacccacttgggttggcctagtggtattggcttgggacctgggagtg 16852386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 968362 - 968408
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||    
T  968362 aacccacttgagttggcctggtggtattggcttgggacctgggagtg 968408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 18540298 - 18540344
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||    
T  18540298 aacccacttgggttggcctagtggtattggcttgggacctgggagtg 18540344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 2203494 - 2203538
Alignment:
Q  48 cccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  2203494 cccacttgggttggcctagtggtattggcttgggacctgggagtg 2203538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 3624582 - 3624626
Alignment:
Q  48 cccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  3624582 cccacttgggttggcctagtggtattggcttgggacctgggagtg 3624626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 8484998 - 8485045
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||    
T  8484998 aaacccacttgggttggcctggtggtatttgcttgggacctgtgagtg 8485045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 19703564 - 19703517
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||    
T  19703564 aaacccacttgggttggcctagtggtattggcttgggacctgagagtg 19703517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 22269010 - 22268963
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||    
T  22269010 aaacccacttgggttggcctggtggtgttggcttgggaccttggagtg 22268963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 46 - 89
Target Start/End: Complemental strand, 23874458 - 23874415
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctggga 89  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  23874458 aacccacttgggttggcctagtggtattggcttgggacctggga 23874415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 28783059 - 28783106
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||    
T  28783059 aaacccacttgggttggcttggtggtattggcttgagacctgggagtg 28783106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 6530807 - 6530853
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||    
T  6530807 aacccacttgggttggcctggtggtgttggcttgggacctaggagtg 6530853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 20994534 - 20994488
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||    
T  20994534 aacccacttgggttggcctagtggtattgacttgggacctgggagtg 20994488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 26688865 - 26688911
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||    
T  26688865 aacccacttgggttggcctggtggtgttggcttgggaccttggagtg 26688911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 29431011 - 29431057
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||    
T  29431011 aacccacttgggttggcctggcggtattggcttgggacttgggagtg 29431057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 29858124 - 29858079
Alignment:
Q  47 acccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||    
T  29858124 acccacttggattggcctggtggtattggcttgggaccagggagtg 29858079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 5264543 - 5264587
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctggga 89  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||    
T  5264543 aaacccacttgggttggcctagtggtattggcttggaacctggga 5264587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 44780191 - 44780144
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||||||||| |||| ||||||||||||| ||||||||    
T  44780191 aaacccacttgggttggcctagtggcattggcttgggacttgggagtg 44780144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 6436631 - 6436585
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||| |||||||||||||||||||||| | ||||||    
T  6436631 aacccacttgggttgccctggtggtattggcttgggacttaggagtg 6436585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 12988424 - 12988474
Alignment:
Q  42 ttaaaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||||| ||||    
T  12988424 ttaaaacccacttggattggcctagtggtattggcttggaacctggaagtg 12988474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 40591732 - 40591778
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||| |||||||||||||||||||||| |||| ||||||||    
T  40591732 aacccacttgtgttggcctggtggtattggcttcggacttgggagtg 40591778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 91
Target Start/End: Original strand, 32157191 - 32157236
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagt 91  Q
    |||||| |||||||||||||||||||||| |||||||||| |||||    
T  32157191 aacccatttgggttggcctggtggtattgacttgggaccttggagt 32157236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 91
Target Start/End: Original strand, 34986102 - 34986147
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagt 91  Q
    |||||||||||||||  ||||||||||||| |||||||||||||||    
T  34986102 aacccacttgggttgttctggtggtattggtttgggacctgggagt 34986147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 4830486 - 4830533
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||||||||||||||| | |||||| ||| |||||    
T  4830486 aaacccacttgggttggcctggtggtatttgtttgggatctgagagtg 4830533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 5801046 - 5801093
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||||| |||||||||||| |||||||| || ||||||    
T  5801046 aaacccacttgggttgacctggtggtattagcttgggatctaggagtg 5801093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 79
Target Start/End: Complemental strand, 3826854 - 3826820
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttg 79  Q
    |||||||||||||||||||| ||||||||||||||    
T  3826854 aaacccacttgggttggcctagtggtattggcttg 3826820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 6569847 - 6569801
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||| ||||||||| ||| ||||||||||||| |||||||||    
T  6569847 aacccacttaggttggcctagtgatattggcttgggatctgggagtg 6569801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 23361725 - 23361679
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||| ||||||||||||| |||||||  ||||||||    
T  23361725 aacccacttgggttgacctggtggtattgacttgggatatgggagtg 23361679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 87
Target Start/End: Original strand, 27121009 - 27121051
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctgg 87  Q
    ||||| |||||||||| |||||||||||||||||| |||||||    
T  27121009 aaacctacttgggttgccctggtggtattggcttgagacctgg 27121051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 30483960 - 30483914
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||||  |||||||||||||||||  ||||||||    
T  30483960 aacccacttgggttggcccagtggtattggcttgggatatgggagtg 30483914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 45 - 78
Target Start/End: Original strand, 45527567 - 45527600
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggctt 78  Q
    |||||||||||||||| |||||||||||||||||    
T  45527567 aaacccacttgggttgtcctggtggtattggctt 45527600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 146
Target Start/End: Original strand, 11819844 - 11819888
Alignment:
Q  102 gttcgattccttctagtgccaatttgggtggggtaatttagcttc 146  Q
    |||||||||  ||||||| ||||||||||||| ||||||||||||    
T  11819844 gttcgattcactctagtgtcaatttgggtgggctaatttagcttc 11819888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 18897165 - 18897205
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacct 85  Q
    |||||||||||||||||||| ||||| |||| |||||||||    
T  18897165 aaacccacttgggttggcctagtggtgttggtttgggacct 18897205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 28566104 - 28566144
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacct 85  Q
    |||||||||||||||| ||| |||||||||| |||||||||    
T  28566104 aaacccacttgggttgacctagtggtattggtttgggacct 28566144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 28573727 - 28573767
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacct 85  Q
    |||||||||||||||| ||| |||||||||| |||||||||    
T  28573727 aaacccacttgggttgacctagtggtattggtttgggacct 28573767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 146
Target Start/End: Complemental strand, 33727881 - 33727837
Alignment:
Q  102 gttcgattccttctagtgccaatttgggtggggtaatttagcttc 146  Q
    |||||||||| ||||||| |||||||| |||| ||||||||||||    
T  33727881 gttcgattccctctagtgtcaatttggatgggctaatttagcttc 33727837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 80
Target Start/End: Original strand, 36042979 - 36043015
Alignment:
Q  44 aaaacccacttgggttggcctggtggtattggcttgg 80  Q
    |||| ||||||||||||| ||||||||||||||||||    
T  36042979 aaaaaccacttgggttgggctggtggtattggcttgg 36043015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 146
Target Start/End: Complemental strand, 44780118 - 44780078
Alignment:
Q  106 gattccttctagtgccaatttgggtggggtaatttagcttc 146  Q
    |||||| ||||||| ||||||||||||| ||||||||||||    
T  44780118 gattccctctagtgtcaatttgggtgggctaatttagcttc 44780078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 2e-17; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 46 - 91
Target Start/End: Original strand, 21589288 - 21589333
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagt 91  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  21589288 aacccacttgggttggcctggtggtattggcttgggacctgggagt 21589333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 21549213 - 21549167
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||    
T  21549213 aacccacttgggttggcctagtggtattggcttgggacctgggagtg 21549167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 46 - 93
Target Start/End: Complemental strand, 7918545 - 7918498
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtgc 93  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  7918545 aacccacttgggttggcctagtggtattggcttggaacctgggagtgc 7918498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 30109385 - 30109338
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||    
T  30109385 aaacccacttgggttggcttggtggtattggcttgtgacctgggagtg 30109338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 30883275 - 30883228
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||    
T  30883275 aaacccacttgggttggtctagtggtattggcttgggacctgggagtg 30883228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 16457810 - 16457856
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||    
T  16457810 aacccacttaggttggcctggtggtattggcttgggaccttggagtg 16457856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 34984805 - 34984852
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||| || ||||||||||||||| |||||||||||    
T  34984805 aaacccacttgggttggtctagtggtattggcttggaacctgggagtg 34984852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 8278351 - 8278305
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||||| ||| ||||||||||||||||| ||||||||    
T  8278351 aacccacttgggttggtctgatggtattggcttgggacttgggagtg 8278305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 16773807 - 16773853
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||| ||||| |||||||||||| |||||||||||||||||    
T  16773807 aacccacttgagttggtctggtggtattgacttgggacctgggagtg 16773853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 25627057 - 25627103
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||||| ||||||||||||||| || ||||||||    
T  25627057 aacccacttgggttggcctagtggtattggcttggaacttgggagtg 25627103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 26078128 - 26078082
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctgggagt 91  Q
    |||||||||||||||||||| |||||||||| ||||||| |||||||    
T  26078128 aaacccacttgggttggcctagtggtattggtttgggacttgggagt 26078082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 29075781 - 29075827
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||| |||| ||||||||||||||||| |||||||||    
T  29075781 aacccacttgggtttgcctagtggtattggcttgggatctgggagtg 29075827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 146
Target Start/End: Original strand, 28285320 - 28285364
Alignment:
Q  102 gttcgattccttctagtgccaatttgggtggggtaatttagcttc 146  Q
    ||||||||| |||||||| ||||||||||||| ||||||||||||    
T  28285320 gttcgattctttctagtgtcaatttgggtgggctaatttagcttc 28285364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 892550 - 892511
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacct 85  Q
    |||||| |||||||||||| ||||||||||||||||||||    
T  892550 aacccatttgggttggcctagtggtattggcttgggacct 892511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 93
Target Start/End: Complemental strand, 3252365 - 3252318
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtgc 93  Q
    ||||||||||||||||||| ||||||||| |||| ||| |||||||||    
T  3252365 aacccacttgggttggcctagtggtattgacttgagacttgggagtgc 3252318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 93
Target Start/End: Complemental strand, 5390926 - 5390879
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtgc 93  Q
    |||||| |||||||||||| |||||||||||||||| | |||||||||    
T  5390926 aacccatttgggttggcctagtggtattggcttggggcttgggagtgc 5390879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 14285160 - 14285207
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||||||||  |||| |||||||||| |||||||||||    
T  14285160 aaacccacttgggttggccgagtggaattggcttggaacctgggagtg 14285207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 22737081 - 22737128
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||| || |||||||||||||||||| ||| ||||    
T  22737081 aaacccacttgggttggtctagtggtattggcttgggacttggaagtg 22737128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 26598523 - 26598570
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||| ||||||| ||||||||||||||||| ||| |||||    
T  26598523 aaacccacttggattggcctagtggtattggcttgggatctgagagtg 26598570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 29692463 - 29692416
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||| ||||||||| ||||||||||||| |||||| |||||||||    
T  29692463 aaacccatttgggttggtctggtggtattggattgggatctgggagtg 29692416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 14495881 - 14495835
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||| ||||||||| |||||||||||| ||||||| |||||||||    
T  14495881 aacccatttgggttggtctggtggtattgacttgggatctgggagtg 14495835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 83
Target Start/End: Original strand, 16436617 - 16436655
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggac 83  Q
    |||| ||||||||||||||| ||||||||||||||||||    
T  16436617 aaactcacttgggttggcctagtggtattggcttgggac 16436655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 19373239 - 19373285
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||| |||||||||||||| |||||||| ||||| ||||||    
T  19373239 aacccacttgagttggcctggtggtgttggcttgagaccttggagtg 19373285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 113 - 146
Target Start/End: Complemental strand, 18206643 - 18206610
Alignment:
Q  113 tctagtgccaatttgggtggggtaatttagcttc 146  Q
    ||||||||||||||||||||| ||||||||||||    
T  18206643 tctagtgccaatttgggtgggctaatttagcttc 18206610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 22020941 - 22020892
Alignment:
Q  43 taaaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||| ||||||||||| | |||||||| |||||||| |||||||||    
T  22020941 taaaaccctcttgggttggcatagtggtattagcttgggatctgggagtg 22020892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 91
Target Start/End: Complemental strand, 31669100 - 31669055
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagt 91  Q
    |||||||||||||||| ||| |||| |||||||||||||| |||||    
T  31669100 aacccacttgggttggtctgatggtgttggcttgggaccttggagt 31669055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 3915074 - 3915034
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctg 86  Q
    |||| ||||||||||||||||||||||| |||||| |||||    
T  3915074 aacctacttgggttggcctggtggtattagcttggaacctg 3915034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 78
Target Start/End: Complemental strand, 32670703 - 32670671
Alignment:
Q  46 aacccacttgggttggcctggtggtattggctt 78  Q
    ||||||| |||||||||||||||||||||||||    
T  32670703 aacccacctgggttggcctggtggtattggctt 32670671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 2e-17; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 37720293 - 37720244
Alignment:
Q  43 taaaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  37720293 taaaacccacttgggttggcctggtgttattggcttgggacctgggagtg 37720244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 46 - 91
Target Start/End: Complemental strand, 55427276 - 55427231
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagt 91  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  55427276 aacccacttgggttggcctggtggtattggcttgggacctgggagt 55427231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 51250599 - 51250552
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||    
T  51250599 aaacccacttgggttggcctggtggtattggcttgggatctgggagtg 51250552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 19238653 - 19238607
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||    
T  19238653 aacccacttgggttggcctggtggtattggcttgggacttgggagtg 19238607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 37109427 - 37109381
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||    
T  37109427 aacccacttgggttggcctagtggtattggcttgggacctgggagtg 37109381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 29195093 - 29195141
Alignment:
Q  44 aaaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  29195093 aaaacccacttgggttggcctggtggtgttggcttgggaccttggagtg 29195141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 27965587 - 27965540
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||    
T  27965587 aaacccacttgggttggcctagtggtattggcttgggatctgggagtg 27965540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 9241101 - 9241055
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  9241101 aacccacttgggttggcctggtggtattggcttgggatctggtagtg 9241055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 46545705 - 46545757
Alignment:
Q  40 tgttaaaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||| ||||||||||||||||||| |||||||||||||| |||||| |||||    
T  46545705 tgttataacccacttgggttggcctagtggtattggcttgagacctgagagtg 46545757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 1730565 - 1730519
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||| ||| ||||||||||||||||||||| |||||    
T  1730565 aacccacttgggttgacctagtggtattggcttgggacctgagagtg 1730519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 37443702 - 37443748
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||| ||| ||||||||||||||||| |||||||||    
T  37443702 aacccacttgggttgacctagtggtattggcttgggatctgggagtg 37443748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 94
Target Start/End: Original strand, 24827824 - 24827873
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctgggagtgcg 94  Q
    |||||||||| |||||| | |||||||||| |||||||||||||||||||    
T  24827824 aaacccactttggttggtccggtggtattgacttgggacctgggagtgcg 24827873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 40284065 - 40284016
Alignment:
Q  43 taaaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||| ||||||||||||||| || ||||||||||||||||| ||||||||    
T  40284065 taaatcccacttgggttggcatgatggtattggcttgggacttgggagtg 40284016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 146
Target Start/End: Complemental strand, 8030212 - 8030168
Alignment:
Q  102 gttcgattccttctagtgccaatttgggtggggtaatttagcttc 146  Q
    |||||||||| ||||||| ||||||||||||| ||||||||||||    
T  8030212 gttcgattccctctagtgtcaatttgggtgggctaatttagcttc 8030168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 92
Target Start/End: Complemental strand, 7292871 - 7292828
Alignment:
Q  49 ccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||| || ||||||||||||||| |||||||||||    
T  7292871 ccacttgggttggtctagtggtattggcttggaacctgggagtg 7292828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 7949531 - 7949484
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||| |||||| | |||||||||||||||||| ||||||    
T  7949531 aaacccacttgggctggcctagcggtattggcttgggacctcggagtg 7949484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 19680865 - 19680818
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||| ||||||| |||||||| ||||||||| ||||||||    
T  19680865 aaacccacttggattggcctagtggtattcgcttgggacttgggagtg 19680818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 21344816 - 21344863
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||||||| || | |||||||||||||| ||||||    
T  21344816 aaacccacttgggttggcctgatgatgttggcttgggaccttggagtg 21344863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 37274536 - 37274489
Alignment:
Q  46 aacccacttgggttggcctggtggta-ttggcttgggacctgggagtg 92  Q
    ||||||||||||||||||| || ||| |||||||||||||||||||||    
T  37274536 aacccacttgggttggcctagtcgtaattggcttgggacctgggagtg 37274489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 85
Target Start/End: Original strand, 37455569 - 37455608
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacct 85  Q
    |||| |||||||||||||||||||| ||||||||||||||    
T  37455569 aaccaacttgggttggcctggtggtgttggcttgggacct 37455608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 92
Target Start/End: Complemental strand, 39030186 - 39030143
Alignment:
Q  49 ccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||| |||||||||||||||| |||||||||||||| ||||||    
T  39030186 ccactggggttggcctggtggtgttggcttgggaccttggagtg 39030143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 42281309 - 42281270
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacct 85  Q
    |||||||||||||||||| |||||| ||||||||||||||    
T  42281309 aacccacttgggttggccaggtggtgttggcttgggacct 42281270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 92
Target Start/End: Complemental strand, 49576963 - 49576924
Alignment:
Q  53 ttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||||||||||||||| |||| ||||||||    
T  49576963 ttgggttggcctggtggtattggctttggacttgggagtg 49576924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 13496241 - 13496287
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||| ||||||||||| |||||||| || |||||    
T  13496241 aacccacttgggttggcatggtggtattgacttgggacatgtgagtg 13496287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 92
Target Start/End: Original strand, 13901746 - 13901788
Alignment:
Q  50 cacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||| || |||||||||||||| ||||||||||||    
T  13901746 cacttgggttggtctagtggtattggcttgagacctgggagtg 13901788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 15180741 - 15180787
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||| | |||| || |||||||||||||||||||||||||||    
T  15180741 aacccacttagattggtctagtggtattggcttgggacctgggagtg 15180787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 17618281 - 17618327
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||  ||| |||||||||||||||| ||||||||||||    
T  17618281 aacccacttgggccggcttggtggtattggcttgagacctgggagtg 17618327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 92
Target Start/End: Original strand, 24234649 - 24234691
Alignment:
Q  50 cacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||| || ||||||||||||||||||| ||||||||    
T  24234649 cacttgggttgtccaggtggtattggcttgggacttgggagtg 24234691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 28635696 - 28635742
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||| |||||||||| || ||||||| |||||||||    
T  28635696 aacccacttgggttgtcctggtggtactgacttgggatctgggagtg 28635742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 31759734 - 31759688
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||||  || |||||||||||||||||| ||||||||    
T  31759734 aacccacttgggttgatctagtggtattggcttgggacttgggagtg 31759688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 92
Target Start/End: Complemental strand, 37980219 - 37980177
Alignment:
Q  50 cacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||||| | |||||||||||||| ||||||    
T  37980219 cacttgggttggcctggtgatgttggcttgggaccttggagtg 37980177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 38206201 - 38206155
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||| |||||||||  ||||||||||||| ||||||    
T  38206201 aacccacttgggttgacctggtggtgctggcttgggaccttggagtg 38206155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 56409951 - 56409997
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||| |||||||||| | |||||||||||||| ||||||    
T  56409951 aacccacttgggctggcctggtgctgttggcttgggaccttggagtg 56409997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 2622475 - 2622425
Alignment:
Q  46 aacccacttgggttggcctggtggt----attggcttgggacctgggagtg 92  Q
    ||||||||||||||||||| |||||    ||||||||||||||||||||||    
T  2622475 aacccacttgggttggcctagtggtattaattggcttgggacctgggagtg 2622425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 45 - 90
Target Start/End: Original strand, 6606057 - 6606102
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctgggag 90  Q
    ||||||||||||||||| ||| |||| |||||||||||||| ||||    
T  6606057 aaacccacttgggttggtctgatggtgttggcttgggaccttggag 6606102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 83
Target Start/End: Complemental strand, 19229283 - 19229246
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggac 83  Q
    |||||| |||||||||||||||||||||||| ||||||    
T  19229283 aacccatttgggttggcctggtggtattggcctgggac 19229246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 91
Target Start/End: Original strand, 47044717 - 47044762
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagt 91  Q
    ||||||||||| ||||||||||||||||| ||||||| ||| ||||    
T  47044717 aacccacttggattggcctggtggtattgacttgggatctgagagt 47044762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 2185110 - 2185062
Alignment:
Q  45 aaacccactt-gggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||| |||||||||| |||||| |||||||| |||||||||||    
T  2185110 aaacccacttcgggttggcctagtggtaatggcttggaacctgggagtg 2185062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 146
Target Start/End: Complemental strand, 9693506 - 9693462
Alignment:
Q  102 gttcgattccttctagtgccaatttgggtggggtaatttagcttc 146  Q
    |||||||||| ||||||| ||||||||||||| ||||||| ||||    
T  9693506 gttcgattccctctagtgtcaatttgggtgggctaatttaccttc 9693462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 146
Target Start/End: Original strand, 28635764 - 28635808
Alignment:
Q  102 gttcgattccttctagtgccaatttgggtggggtaatttagcttc 146  Q
    |||||||||  ||| ||||||||||||||||| ||||||||||||    
T  28635764 gttcgattctctctggtgccaatttgggtgggctaatttagcttc 28635808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 90
Target Start/End: Original strand, 33619206 - 33619250
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggag 90  Q
    ||||||||||||||| | ||||||||||||||| ||| |||||||    
T  33619206 aacccacttgggttgccttggtggtattggcttaggatctgggag 33619250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 146
Target Start/End: Complemental strand, 51250530 - 51250486
Alignment:
Q  102 gttcgattccttctagtgccaatttgggtggggtaatttagcttc 146  Q
    |||||||||| ||  ||||||||||||||||| ||||||||||||    
T  51250530 gttcgattccctccggtgccaatttgggtgggctaatttagcttc 51250486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 8e-17; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 41487360 - 41487408
Alignment:
Q  44 aaaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  41487360 aaaacccacttgggttggcctggtggtattggcttgggacttgggagtg 41487408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 30579334 - 30579381
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  30579334 aaacccacttgggttggcctggtggtattggcttgagacctgggagtg 30579381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 25021411 - 25021365
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||    
T  25021411 aacccacttgggttggcctagtggtattggcttgggacctgggagtg 25021365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 26459486 - 26459440
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||    
T  26459486 aacccacttgggttggcctagtggtattggcttgggacctgggagtg 26459440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 42836077 - 42836031
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||    
T  42836077 aacccacttgggttggcctagtggtattggcttgggacctgggagtg 42836031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 46 - 91
Target Start/End: Original strand, 39631844 - 39631889
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagt 91  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  39631844 aacccacttgggttggcctagtggtattggcttgggacctgggagt 39631889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 22932787 - 22932739
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtgcg 94  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||    
T  22932787 aacccacttgggttggtatggtggtattggcttgggacctgggagtgcg 22932739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 49 - 92
Target Start/End: Complemental strand, 15905746 - 15905703
Alignment:
Q  49 ccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  15905746 ccacttgggttggcctggcggtattggcttgggacctgggagtg 15905703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 7801180 - 7801226
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||    
T  7801180 aacccacttggtttggcctggtggtattgacttgggacctgggagtg 7801226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 22760863 - 22760909
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||    
T  22760863 aacccacttgggttggtctggtggtattgacttgggacctgggagtg 22760909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 23301678 - 23301632
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||    
T  23301678 aacccacttgggttggcctggtggtattgacttgggacttgggagtg 23301632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 39499795 - 39499749
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||    
T  39499795 aacccacttgggttggcctagtggtattggcttgggacctgtgagtg 39499749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 43590907 - 43590953
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||    
T  43590907 aacccagttgggttggcctggtggtattggcttgggacttgggagtg 43590953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 48771938 - 48771984
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||    
T  48771938 aacccacttgggttggcttggtggtattggcttgggatctgggagtg 48771984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 91
Target Start/End: Original strand, 30442488 - 30442533
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagt 91  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||    
T  30442488 aacccacttgggttggcccagtggtattggcttgggacctgggagt 30442533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 11721037 - 11720993
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctggga 89  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||    
T  11721037 aaaccaacttcggttggcctggtggtattggcttgggacctggga 11720993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 43215182 - 43215230
Alignment:
Q  44 aaaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||||||| || |||||||||||||||||||| ||||||    
T  43215182 aaaacccacttgggttggtctagtggtattggcttgggacctcggagtg 43215230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 2446307 - 2446354
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||| ||| ||||||||||||||||| ||||||||    
T  2446307 aaacccacttgggttggtctgatggtattggcttgggacttgggagtg 2446354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 5273666 - 5273627
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacct 85  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  5273666 aacccacttgggttggcctggtggtgttggcttgggacct 5273627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 23552117 - 23552164
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||||||||| ||| ||||| |||||||||||||||||    
T  23552117 aaacccacttgggttggcctagtgctattgacttgggacctgggagtg 23552164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 92
Target Start/End: Complemental strand, 45976996 - 45976953
Alignment:
Q  49 ccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||||| |||||||||||||| ||||||||||||    
T  45976996 ccacttgggttggcctagtggtattggcttgtgacctgggagtg 45976953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 5579310 - 5579264
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||| ||||||||| |||||||||||||| ||||||    
T  5579310 aacccacttgggttgacctggtggtgttggcttgggaccttggagtg 5579264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 19553454 - 19553499
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||    
T  19553454 aacccgcttgggttggcctggtggtattggctt-ggacctgggagtg 19553499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 25956368 - 25956322
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||| |||||||||||| |||||||||||||||||||| ||||||    
T  25956368 aacccatttgggttggcctagtggtattggcttgggaccttggagtg 25956322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 45559200 - 45559246
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||||| ||||||||||||||| |||| ||||||    
T  45559200 aacccacttgggttggcctagtggtattggcttggaaccttggagtg 45559246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 48125250 - 48125204
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||||| |||||||| |||||||||||||| ||||||    
T  48125250 aacccacttgggttggtctggtggtgttggcttgggaccttggagtg 48125204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 35328952 - 35328911
Alignment:
Q  44 aaaacccacttgggttggcctggtggtattggcttgggacct 85  Q
    ||||||||||||||||||||||||||| ||||||||| ||||    
T  35328952 aaaacccacttgggttggcctggtggtgttggcttggaacct 35328911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 21854550 - 21854594
Alignment:
Q  48 cccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||||||| ||||||||||| |||| |||||||||    
T  21854550 cccacttgggttggcctgatggtattggctagggatctgggagtg 21854594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 26199509 - 26199549
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctg 86  Q
    |||||||||| |||||||| |||||||||||||||||||||    
T  26199509 aacccacttgagttggcctagtggtattggcttgggacctg 26199549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 146
Target Start/End: Complemental strand, 33181218 - 33181174
Alignment:
Q  102 gttcgattccttctagtgccaatttgggtggggtaatttagcttc 146  Q
    |||||||||| ||||||| ||||||||||||| ||||||||||||    
T  33181218 gttcgattccctctagtgtcaatttgggtgggctaatttagcttc 33181174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 38374676 - 38374636
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacct 85  Q
    |||||||||||||||||| ||||||| ||||||||||||||    
T  38374676 aaacccacttgggttggcgtggtggtgttggcttgggacct 38374636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 43663175 - 43663127
Alignment:
Q  42 ttaaaacccacttgggttggcctggtggtattggcttgggacctgggag 90  Q
    |||||| ||||||||||||||||| |||||||| |||||||||| ||||    
T  43663175 ttaaaatccacttgggttggcctgatggtattgacttgggacctaggag 43663127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 81
Target Start/End: Complemental strand, 6426128 - 6426093
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttggg 81  Q
    ||||||||||||||||||||||||| ||||||||||    
T  6426128 aacccacttgggttggcctggtggtgttggcttggg 6426093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 92
Target Start/End: Complemental strand, 20952222 - 20952179
Alignment:
Q  49 ccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||| |||| ||||||||| ||||||||||||||||    
T  20952222 ccacttgggttgacctgatggtattggtttgggacctgggagtg 20952179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 81
Target Start/End: Original strand, 31835192 - 31835227
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttggg 81  Q
    ||||||||||||||||||||||||| ||||||||||    
T  31835192 aacccacttgggttggcctggtggtgttggcttggg 31835227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 84
Target Start/End: Complemental strand, 3280561 - 3280523
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacc 84  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  3280561 aacccacttgggttgacatggtggtattggcttgggacc 3280523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 20335907 - 20335861
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||||| || | |||||||||||||||| ||||||||    
T  20335907 aacccacttgggttggtctagaggtattggcttgggacttgggagtg 20335861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 24513797 - 24513843
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||||| |||||||||||||| ||  ||||||||    
T  24513797 aacccacttgggttggcctagtggtattggcttgagatttgggagtg 24513843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 25590611 - 25590657
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||| |||| ||||||||||||| || |||||||||    
T  25590611 aacccacttgggttgacctgttggtattggcttgagatctgggagtg 25590657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 27776172 - 27776218
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||||||||||||||||  ||||||||| || |||||    
T  27776172 aacccacttgggttggcctggtggtatacgcttgggacttgagagtg 27776218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 33869521 - 33869475
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||||| || ||||||||||| ||||||| ||||    
T  33869521 aacccacttgggttggcctagtagtattggcttgagacctggaagtg 33869475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 22702237 - 22702274
Alignment:
Q  43 taaaacccacttgggttggcctggtggtattggcttgg 80  Q
    |||||||||||||| |||| ||||||||||||||||||    
T  22702237 taaaacccacttggattggtctggtggtattggcttgg 22702274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 79
Target Start/End: Complemental strand, 48039723 - 48039690
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttg 79  Q
    ||||||||||||||||||||||||| ||||||||    
T  48039723 aacccacttgggttggcctggtggtgttggcttg 48039690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 82
Target Start/End: Original strand, 4161288 - 4161324
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttggga 82  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  4161288 aacccatttgggttggtctggtggtattggcttggga 4161324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 82
Target Start/End: Original strand, 15137553 - 15137589
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttggga 82  Q
    |||||||||||||||||||||||||| || |||||||    
T  15137553 aacccacttgggttggcctggtggtactgacttggga 15137589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 44628257 - 44628213
Alignment:
Q  48 cccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||||||| | || ||||||||||| ||||||    
T  44628257 cccacttgggttggcctggtgttgttagcttgggaccttggagtg 44628213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 146
Target Start/End: Complemental strand, 48983741 - 48983697
Alignment:
Q  102 gttcgattccttctagtgccaatttgggtggggtaatttagcttc 146  Q
    |||||||||| ||||||| ||||||||||||| ||||||| ||||    
T  48983741 gttcgattccctctagtgtcaatttgggtgggctaatttaacttc 48983697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 8e-17; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 33549102 - 33549150
Alignment:
Q  44 aaaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  33549102 aaaacccacttgggttggtctggtggtattggcttgggacctgggagtg 33549150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 12188380 - 12188333
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  12188380 aaacccacttgggttggcctagtggtattggcttgggacctgggagtg 12188333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 12234584 - 12234537
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||    
T  12234584 aaacccacttaggttggcctggtggtattgacttgggacctgggagtg 12234537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 31623068 - 31623021
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||    
T  31623068 aaacccacttgggttggtccggtggtattggcttgggacctgggagtg 31623021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 21418470 - 21418516
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||    
T  21418470 aacccagttgggttggcctggtggtattggcttgggacttgggagtg 21418516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 10338251 - 10338204
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||| ||||||||||||| |||||||||||||||||||||| ||||||    
T  10338251 aaactcacttgggttggcatggtggtattggcttgggacctaggagtg 10338204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 92
Target Start/End: Original strand, 13441053 - 13441096
Alignment:
Q  49 ccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||| | ||||||||||||||||||||||||||||    
T  13441053 ccacttgggttggtcgggtggtattggcttgggacctgggagtg 13441096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 50 - 88
Target Start/End: Complemental strand, 6776679 - 6776641
Alignment:
Q  50 cacttgggttggcctggtggtattggcttgggacctggg 88  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  6776679 cacttgggttggcctggtggtattggcttgggatctggg 6776641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 14557962 - 14558008
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||||| |||||||| |||||||||||||||| ||||    
T  14557962 aacccacttgggttggtctggtggtgttggcttgggacctggaagtg 14558008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 30127400 - 30127446
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||||| |||||||||||||||||||  |||||||||    
T  30127400 aacccacttgggttggtctggtggtattggcttggggtctgggagtg 30127446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 22749 - 22701
Alignment:
Q  44 aaaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||||||| || ||||| |||||||||||||| ||||||    
T  22749 aaaacccacttgggttgggctagtggttttggcttgggaccttggagtg 22701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 14278186 - 14278139
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtgcg 94  Q
    ||||||| ||||||||||||||| ||||||||| |||||||||||||||    
T  14278186 aacccacatgggttggcctggtg-tattggctttggacctgggagtgcg 14278139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 146
Target Start/End: Original strand, 20213109 - 20213153
Alignment:
Q  102 gttcgattccttctagtgccaatttgggtggggtaatttagcttc 146  Q
    |||||||||| ||||||| ||||||||||||| ||||||||||||    
T  20213109 gttcgattccctctagtgtcaatttgggtgggctaatttagcttc 20213153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 146
Target Start/End: Original strand, 22107132 - 22107176
Alignment:
Q  102 gttcgattccttctagtgccaatttgggtggggtaatttagcttc 146  Q
    |||||||||| ||||||| ||||||||||||| ||||||||||||    
T  22107132 gttcgattccctctagtgtcaatttgggtgggctaatttagcttc 22107176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 32613214 - 32613170
Alignment:
Q  48 cccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||||||||||||| ||||||  |||||||||    
T  32613214 cccacttgggttggcctggtggtattgacttggggtctgggagtg 32613170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 146
Target Start/End: Complemental strand, 14199954 - 14199911
Alignment:
Q  103 ttcgattccttctagtgccaatttgggtggggtaatttagcttc 146  Q
    ||||||||||||||||| ||||||||||||  ||||||||||||    
T  14199954 ttcgattccttctagtgtcaatttgggtggactaatttagcttc 14199911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 85
Target Start/End: Original strand, 28028530 - 28028569
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacct 85  Q
    ||||||||||||||||||||||||| ||| ||||||||||    
T  28028530 aacccacttgggttggcctggtggtgttgacttgggacct 28028569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 24641266 - 24641220
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||| |||||||||| ||||||||||| ||||||| |||||||||    
T  24641266 aacccatttgggttggcttggtggtattgacttgggatctgggagtg 24641220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 91
Target Start/End: Complemental strand, 1056761 - 1056716
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagt 91  Q
    ||||||||||||||| ||| ||||||||||| |||||| |||||||    
T  1056761 aacccacttgggttgacctagtggtattggcctgggacttgggagt 1056716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 6758497 - 6758452
Alignment:
Q  47 acccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||| |||||||||||||||||||||| |||  ||||||||    
T  6758497 acccacttgtgttggcctggtggtattggcttaggatttgggagtg 6758452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 52 - 85
Target Start/End: Original strand, 34444809 - 34444842
Alignment:
Q  52 cttgggttggcctggtggtattggcttgggacct 85  Q
    ||||||||||||||||||||||| ||||||||||    
T  34444809 cttgggttggcctggtggtattgacttgggacct 34444842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 91
Target Start/End: Original strand, 11597904 - 11597940
Alignment:
Q  55 gggttggcctggtggtattggcttgggacctgggagt 91  Q
    |||||| ||||||||||||||||||||| ||||||||    
T  11597904 gggttgacctggtggtattggcttgggatctgggagt 11597940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 24507615 - 24507567
Alignment:
Q  43 taaaacccacttgggttggcctggtggtattggcttgggacctgggagt 91  Q
    |||||| || |||||||||||| ||||| |||||||||||||| |||||    
T  24507615 taaaactcatttgggttggcctagtggtgttggcttgggaccttggagt 24507567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 3e-16; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 37480074 - 37480121
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||    
T  37480074 aaacccacttgggttggcctggtggtattggcttgggacctgagagtg 37480121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 42602553 - 42602600
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  42602553 aaacccacttgggttggcctagtggtattggcttgggacctgggagtg 42602600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 42327471 - 42327425
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||    
T  42327471 aacccacttgggttggcctagtggtattggcttgggacctgggagtg 42327425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 7799114 - 7799065
Alignment:
Q  43 taaaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  7799114 taaaacccacttgggttgtcctggtggtattggcttgggacttgggagtg 7799065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 29503270 - 29503317
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||    
T  29503270 aaacccacttgggttggcctagtggtattggtttgggacctgggagtg 29503317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 39714991 - 39715038
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||    
T  39714991 aaacccacttgggttggcatggtggtattgacttgggacctgggagtg 39715038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 23052599 - 23052553
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||    
T  23052599 aacccacttaggttggcctggtggtattggcttgggacttgggagtg 23052553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 89
Target Start/End: Complemental strand, 37756046 - 37756004
Alignment:
Q  47 acccacttgggttggcctggtggtattggcttgggacctggga 89  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  37756046 acccacttgggttggcttggtggtattggcttgggacctggga 37756004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 42922414 - 42922460
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||    
T  42922414 aacccacttgggttggcctagtggtattggcttggaacctgggagtg 42922460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 25931004 - 25931052
Alignment:
Q  44 aaaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||| ||||||||||||||||||||||| |||||||||| |||||    
T  25931004 aaaacccatttgggttggcctggtggtattggtttgggacctgagagtg 25931052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 1729815 - 1729862
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||| || |||||||||||||||||| ||||||||    
T  1729815 aaacccacttgggttgggctagtggtattggcttgggacttgggagtg 1729862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 21213768 - 21213815
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||| | |||||||| ||||||||||||||||||||||||||||||    
T  21213768 aaacccgcatgggttggtctggtggtattggcttgggacctgggagtg 21213815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 29197453 - 29197406
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||||||| ||||||||||| |||||||| ||||||||    
T  29197453 aaacccacttgggttggcttggtggtattgacttgggacttgggagtg 29197406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 342395 - 342441
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||||||||||| |||||||| ||||| ||||||    
T  342395 aacccacttgggttggcctggtggtgttggcttgtgaccttggagtg 342441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 32106566 - 32106612
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||||||||||| ||| |||||||||| ||||||    
T  32106566 aacccacttgggttggcctggtggtgttgacttgggaccttggagtg 32106612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 90
Target Start/End: Complemental strand, 3697476 - 3697431
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctgggag 90  Q
    ||||||||||||||||| ||| ||||||||||||||||||| ||||    
T  3697476 aaacccacttgggttggtctgatggtattggcttgggaccttggag 3697431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 16918653 - 16918608
Alignment:
Q  47 acccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||||||| |||||||||| |||||| |||||||||    
T  16918653 acccacttgggttggcctagtggtattggtttgggatctgggagtg 16918608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 91
Target Start/End: Complemental strand, 40416466 - 40416421
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagt 91  Q
    ||||||||||||||||||| ||||||||| ||||| ||||||||||    
T  40416466 aacccacttgggttggcctagtggtattgacttggaacctgggagt 40416421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 12086203 - 12086159
Alignment:
Q  48 cccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||  ||||||||||||||||||||||||||||||| ||||    
T  12086203 cccacttaagttggcctggtggtattggcttgggacctggaagtg 12086159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 19322767 - 19322814
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||  || |||||||||| ||||||||||||||||    
T  19322767 aaacccacttgggttgatctagtggtattggtttgggacctgggagtg 19322814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 92
Target Start/End: Original strand, 30359657 - 30359700
Alignment:
Q  49 ccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||| ||||||| |||||||||||||| ||||||    
T  30359657 ccacttgggttggcttggtggtgttggcttgggaccttggagtg 30359700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 11062360 - 11062406
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||||| ||| ||||||||||| || ||||||||    
T  11062360 aacccacttgggttggcctagtgatattggcttggaacttgggagtg 11062406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 16381730 - 16381684
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||||| ||||||| ||||||||| ||| |||||    
T  16381730 aacccacttgggttggcctagtggtataggcttgggatctgagagtg 16381684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 16525178 - 16525224
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||||||||| |||| |||||||||||| | ||||||    
T  16525178 aacccacttgggttggcctgatggtgttggcttgggacgttggagtg 16525224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 18825341 - 18825387
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||  ||||||||| |||||||||||||| ||||||    
T  18825341 aacccacttgggtttacctggtggtgttggcttgggacctaggagtg 18825387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 19016031 - 19016077
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||||| ||| ||||||||||||| ||| ||||||||    
T  19016031 aacccacttgggttggtctgatggtattggcttgagacttgggagtg 19016077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 92
Target Start/End: Original strand, 24191842 - 24191884
Alignment:
Q  50 cacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||| ||||||||| |||||||||||||||||||| |||||    
T  24191842 cacttgagttggcctgatggtattggcttgggacctgagagtg 24191884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 26482093 - 26482139
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||| |||||||||| |||| |||||||||||||| ||||||    
T  26482093 aacccacttaggttggcctgatggtgttggcttgggacctaggagtg 26482139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 30808724 - 30808683
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctg 86  Q
    ||||||||||||||||| |||||| |||||||||| ||||||    
T  30808724 aaacccacttgggttggtctggtgatattggcttgagacctg 30808683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 146
Target Start/End: Complemental strand, 21195684 - 21195640
Alignment:
Q  102 gttcgattccttctagtgccaatttgggtggggtaatttagcttc 146  Q
    |||||||||| ||||||| |||||||| |||| ||||||||||||    
T  21195684 gttcgattccctctagtgtcaatttggatgggctaatttagcttc 21195640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 24144676 - 24144716
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctg 86  Q
    ||||||||||| |||||||| |||||||| |||||||||||    
T  24144676 aacccacttggattggcctgatggtattgacttgggacctg 24144716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 3e-16; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 40257398 - 40257445
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  40257398 aaacccacttgggttggcctggtggtattggcttgagacctgggagtg 40257445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 9165271 - 9165225
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||    
T  9165271 aacccacttgggttggcctagtggtattggcttgggacctgggagtg 9165225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 36371469 - 36371516
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||    
T  36371469 aaacccacttgggttggcctagtggtattggcttggaacctgggagtg 36371516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 41 - 92
Target Start/End: Original strand, 41508826 - 41508877
Alignment:
Q  41 gttaaaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||||||||||||||||| ||| |||||| |||||||||    
T  41508826 gttaaaacccacttgggttggcctggtggtactggtttgggatctgggagtg 41508877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 15581217 - 15581171
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||    
T  15581217 aacccacttgggttggcctggtggtgttggcttgggaccttggagtg 15581171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 16170054 - 16170008
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||    
T  16170054 aacccacttgggttagcctggtggtattgacttgggacctgggagtg 16170008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 31794340 - 31794294
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||    
T  31794340 aacccacttgggttggcctagtggtattggcttgggacttgggagtg 31794294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 52116857 - 52116811
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||    
T  52116857 aacccagttgggttggcctggtggtattggcttgggacttgggagtg 52116811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 44126396 - 44126441
Alignment:
Q  47 acccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||||||||||||||||| | |||||||||||||||    
T  44126396 acccacttgggttggcctggtggtattgacctgggacctgggagtg 44126441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 82
Target Start/End: Complemental strand, 19528403 - 19528367
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttggga 82  Q
    |||||||||||||||||||||||||||||||||||||    
T  19528403 aacccacttgggttggcctggtggtattggcttggga 19528367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 37046983 - 37047031
Alignment:
Q  44 aaaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||||||| |||||||| |||||||||||||| ||||||    
T  37046983 aaaacccacttgggttggtctggtggtgttggcttgggaccttggagtg 37047031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 4566547 - 4566594
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||||||||| ||| ||||||||||| |||||||||||    
T  4566547 aaacccacttgggttggcctagtgatattggcttggaacctgggagtg 4566594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 92
Target Start/End: Complemental strand, 51013207 - 51013156
Alignment:
Q  41 gttaaaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||| || |||||||||||||||| ||||||||||| ||||||||    
T  51013207 gttaaaacccattttggttggcctggtggtactggcttgggacatgggagtg 51013156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 952511 - 952557
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||| ||||| |||||||| |||||||||||||||||||||    
T  952511 aacccacttgagttggtctggtggtgttggcttgggacctgggagtg 952557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 21694446 - 21694492
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||| |||||||||||||||||| ||| ||||||||    
T  21694446 aacccacttgggttgacctggtggtattggcttgagacttgggagtg 21694492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 24857906 - 24857860
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||||||||||| |||||| ||||||| ||||||    
T  24857906 aacccacttgggttggcctggtggtgttggctagggaccttggagtg 24857860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 91
Target Start/End: Complemental strand, 1690153 - 1690108
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagt 91  Q
    ||||||||||  |||| |||||||||||||||||||||||||||||    
T  1690153 aacccacttgaattggtctggtggtattggcttgggacctgggagt 1690108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 90
Target Start/End: Complemental strand, 21547557 - 21547512
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctgggag 90  Q
    ||||| |||||||||||||| |||||||||||||||||| ||||||    
T  21547557 aaaccgacttgggttggcctagtggtattggcttgggacatgggag 21547512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 91
Target Start/End: Complemental strand, 37310052 - 37310007
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagt 91  Q
    |||||||||||||||||||||||||||| |||| ||| ||||||||    
T  37310052 aacccacttgggttggcctggtggtattagcttcggatctgggagt 37310007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 146
Target Start/End: Original strand, 6122862 - 6122906
Alignment:
Q  102 gttcgattccttctagtgccaatttgggtggggtaatttagcttc 146  Q
    |||||||||| ||||||| ||||||||||||| ||||||||||||    
T  6122862 gttcgattccctctagtgtcaatttgggtgggctaatttagcttc 6122906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 86
Target Start/End: Complemental strand, 17745328 - 17745292
Alignment:
Q  50 cacttgggttggcctggtggtattggcttgggacctg 86  Q
    ||||||||||||||| |||||||||||||||||||||    
T  17745328 cacttgggttggcctagtggtattggcttgggacctg 17745292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 33700847 - 33700803
Alignment:
Q  48 cccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||| ||||||||||||||| | |||||||||    
T  33700847 cccacttgggttggcctagtggtattggcttggaatctgggagtg 33700803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 34228872 - 34228920
Alignment:
Q  44 aaaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||| ||||| |||||||| |||||||||||||| ||||||    
T  34228872 aaaacccacttgagttggtctggtggtgttggcttgggacctcggagtg 34228920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 39012289 - 39012337
Alignment:
Q  44 aaaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||| ||||||||| ||||| |||||||||||||| ||||||    
T  39012289 aaaacccactttggttggcctagtggtgttggcttgggaccttggagtg 39012337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 146
Target Start/End: Original strand, 3799967 - 3800018
Alignment:
Q  95 gtttcatgttcgattccttctagtgccaatttgggtggggtaatttagcttc 146  Q
    |||||| |||||||||  |||||||||||||| |||||| ||||||||||||    
T  3799967 gtttcaggttcgattctctctagtgccaatttaggtgggctaatttagcttc 3800018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 8177259 - 8177212
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||| ||| |||||||| ||||||||||||||||| |||||||||    
T  8177259 aaacccatttgagttggcctagtggtattggcttgggatctgggagtg 8177212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 45235456 - 45235409
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||| ||| ||||||||| ||||||| ||||||||    
T  45235456 aaacccacttgggttggtctgatggtattggtttgggacttgggagtg 45235409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 50901581 - 50901628
Alignment:
Q  46 aacccacttgggttggcctggtggt-attggcttgggacctgggagtg 92  Q
    ||||||||||||||||||| ||||| ||||||||||||||||| ||||    
T  50901581 aacccacttgggttggcctagtggtaattggcttgggacctggtagtg 50901628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 90
Target Start/End: Original strand, 48400178 - 48400216
Alignment:
Q  52 cttgggttggcctggtggtattggcttgggacctgggag 90  Q
    |||||||||||||| ||||||||||||||||||| ||||    
T  48400178 cttgggttggcctgatggtattggcttgggaccttggag 48400216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 91
Target Start/End: Original strand, 10526823 - 10526868
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagt 91  Q
    |||||| ||||||||| |  ||||||||||||||||||||||||||    
T  10526823 aacccatttgggttggtccagtggtattggcttgggacctgggagt 10526868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 89
Target Start/End: Complemental strand, 28022191 - 28022158
Alignment:
Q  56 ggttggcctggtggtattggcttgggacctggga 89  Q
    ||||| ||||||||||||||||||||||||||||    
T  28022191 ggttgtcctggtggtattggcttgggacctggga 28022158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 29817672 - 29817721
Alignment:
Q  43 taaaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||| ||||||||||||||||||| ||||| |||| |||||| |||||    
T  29817672 taaaactcacttgggttggcctggtgatattgacttgagacctgagagtg 29817721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 91
Target Start/End: Original strand, 30689012 - 30689057
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagt 91  Q
    ||||||||| ||||| |||| |||||||||||| ||||||||||||    
T  30689012 aacccacttaggttgccctgatggtattggcttaggacctgggagt 30689057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 51814491 - 51814540
Alignment:
Q  43 taaaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||||||||||||||| |||||||| |||| || ||| |||||    
T  51814491 taaaacccacttgggttggcctgatggtattgacttgagatctgagagtg 51814540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 2219972 - 2220012
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctg 86  Q
    |||||||||||||||  |||||||||||||||||| |||||    
T  2219972 aacccacttgggttgttctggtggtattggcttggaacctg 2220012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 26232464 - 26232416
Alignment:
Q  44 aaaacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||| ||||||||||||| || |||||||||||||| || |||||||||    
T  26232464 aaaatccacttgggttggtctagtggtattggcttgagatctgggagtg 26232416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 146
Target Start/End: Complemental strand, 31794272 - 31794228
Alignment:
Q  102 gttcgattccttctagtgccaatttgggtggggtaatttagcttc 146  Q
    |||||||||| ||| ||| ||||||||||||| ||||||||||||    
T  31794272 gttcgattccctctggtgtcaatttgggtgggctaatttagcttc 31794228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 37400274 - 37400314
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctg 86  Q
    |||| ||||||||||| ||||||||||||||||| ||||||    
T  37400274 aaccaacttgggttggtctggtggtattggcttgagacctg 37400314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 146
Target Start/End: Original strand, 44961833 - 44961877
Alignment:
Q  102 gttcgattccttctagtgccaatttgggtggggtaatttagcttc 146  Q
    |||||||||  ||||||| ||||||||||||| ||||||||||||    
T  44961833 gttcgattctctctagtgtcaatttgggtgggctaatttagcttc 44961877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 15399 - 15353
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||    
T  15399 aacccacttgggttggtctggtggtattggcttgggacctgggagtg 15353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 94
Target Start/End: Original strand, 10218 - 10267
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctgggagtgcg 94  Q
    ||||||||||||||||||||| || ||||||||||||| |||||||||||    
T  10218 aaacccacttgggttggcctgatgatattggcttgggatctgggagtgcg 10267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 92
Target Start/End: Complemental strand, 95044 - 95001
Alignment:
Q  49 ccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||||| ||||||||||||||| |||||||||||    
T  95044 ccacttgggttggcctagtggtattggcttggaacctgggagtg 95001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 49 - 91
Target Start/End: Complemental strand, 38975 - 38933
Alignment:
Q  49 ccacttgggttggcctggtggtattggcttgggacctgggagt 91  Q
    ||||||||||||| ||||||||||||||||||||||| |||||    
T  38975 ccacttgggttggtctggtggtattggcttgggacctaggagt 38933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 112282 - 112328
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||||||||||||||| |||||||||||| | |||||||||    
T  112282 aacccacttgggttggcctggttgtattggcttggaatctgggagtg 112328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 94
Target Start/End: Complemental strand, 32846 - 32797
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttgggacctgggagtgcg 94  Q
    |||||||||||||||||||||||||||||||||  ||| ||||| |||||    
T  32846 aaacccacttgggttggcctggtggtattggctgaggatctgggggtgcg 32797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 45 - 82
Target Start/End: Complemental strand, 15854 - 15817
Alignment:
Q  45 aaacccacttgggttggcctggtggtattggcttggga 82  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  15854 aaacccacttaagttggcctggtggtattggcttggga 15817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0955 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0955
Description:

Target: scaffold0955; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 85
Target Start/End: Original strand, 3466 - 3502
Alignment:
Q  49 ccacttgggttggcctggtggtattggcttgggacct 85  Q
    ||||||||||||||| |||||||||||||||||||||    
T  3466 ccacttgggttggccgggtggtattggcttgggacct 3502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 11534 - 11574
Alignment:
Q  52 cttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||| |||||||||||||||||||||||| |||||||||    
T  11534 cttgggatggcctggtggtattggcttgggatctgggagtg 11574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 92
Target Start/End: Complemental strand, 43401 - 43362
Alignment:
Q  53 ttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    |||||||||| |||||||||||||||||||| ||||||||    
T  43401 ttgggttggcatggtggtattggcttgggacttgggagtg 43362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 52 - 89
Target Start/End: Complemental strand, 910 - 873
Alignment:
Q  52 cttgggttggcctggtggtattggcttgggacctggga 89  Q
    |||||| |||||||||||||||||||||||| ||||||    
T  910 cttggggtggcctggtggtattggcttgggatctggga 873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 83
Target Start/End: Complemental strand, 15397 - 15360
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggac 83  Q
    |||||||||||||||| |||||||| ||||||||||||    
T  15397 aacccacttgggttggtctggtggtgttggcttgggac 15360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 79
Target Start/End: Complemental strand, 41709 - 41676
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttg 79  Q
    ||||||||||||||||||| ||||||||||||||    
T  41709 aacccacttgggttggcctagtggtattggcttg 41676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 91
Target Start/End: Original strand, 47382 - 47427
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagt 91  Q
    |||||||||||||| |||| ||||||||||||| ||| ||||||||    
T  47382 aacccacttgggtttgccttgtggtattggcttaggatctgggagt 47427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 91
Target Start/End: Complemental strand, 61724 - 61679
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctgggagt 91  Q
    ||||||| |||||||  || ||||||||||||||||||||||||||    
T  61724 aacccacatgggttgatctagtggtattggcttgggacctgggagt 61679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 7802 - 7762
Alignment:
Q  46 aacccacttgggttggcctggtggtattggcttgggacctg 86  Q
    |||| ||||||||||| ||||||||||||||||| ||||||    
T  7802 aaccaacttgggttggtctggtggtattggcttgagacctg 7762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 1750 - 1798
Alignment:
Q  43 taaaacccacttgggttggcctggtggtattggcttgggacctgggagt 91  Q
    |||||| || |||||||||||| ||||| |||||||||||||| |||||    
T  1750 taaaactcatttgggttggcctagtggtgttggcttgggaccttggagt 1798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 146
Target Start/End: Original strand, 4408 - 4452
Alignment:
Q  102 gttcgattccttctagtgccaatttgggtggggtaatttagcttc 146  Q
    |||||||||| ||||||| ||||||||||||  ||||||||||||    
T  4408 gttcgattccctctagtgtcaatttgggtggactaatttagcttc 4452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 12186 - 12234
Alignment:
Q  43 taaaacccacttgggttggcctggtggtattggcttgggacctgggagt 91  Q
    |||||| || |||||||||||| ||||| |||||||||||||| |||||    
T  12186 taaaactcatttgggttggcctagtggtgttggcttgggaccttggagt 12234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 106054 - 106094
Alignment:
Q  52 cttgggttggcctggtggtattggcttgggacctgggagtg 92  Q
    ||||||||||| |||||||||| |||||||||| |||||||    
T  106054 cttgggttggcgtggtggtattagcttgggaccagggagtg 106094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University