View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16533_high_121 (Length: 220)
Name: NF16533_high_121
Description: NF16533
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16533_high_121 |
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Alignment Details
Target: chr5 (Bit Score: 124; Significance: 6e-64; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 78 - 201
Target Start/End: Original strand, 6447266 - 6447389
Alignment:
| Q |
78 |
tactccacagccataacaattaggtgacgagacagatttatttcaaaagacaaagggagggttcaatgcctagttgtagaaaccacaagacacgtcgata |
177 |
Q |
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| T |
6447266 |
tactccacagccataacaattaggtgacgagacagatttatttcaaaagacaaagggagggttcaatgcctagttgtagaaaccacaagacacgtcgata |
6447365 |
T |
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| Q |
178 |
gtctacttgaaaatcacttctaag |
201 |
Q |
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|||||||||||||||||||||||| |
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| T |
6447366 |
gtctacttgaaaatcacttctaag |
6447389 |
T |
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