View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16533_high_57 (Length: 354)

Name: NF16533_high_57
Description: NF16533
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16533_high_57
NF16533_high_57
[»] chr7 (56 HSPs)
chr7 (181-354)||(48247970-48248143)
chr7 (188-354)||(9181534-9181699)
chr7 (189-354)||(25637577-25637741)
chr7 (187-354)||(15712366-15712532)
chr7 (186-354)||(16081299-16081466)
chr7 (189-354)||(26026697-26026861)
chr7 (186-354)||(786782-786950)
chr7 (189-354)||(5745642-5745806)
chr7 (182-354)||(27245199-27245371)
chr7 (186-354)||(7732866-7733033)
chr7 (186-354)||(11971334-11971505)
chr7 (188-354)||(27245583-27245748)
chr7 (189-354)||(14311666-14311830)
chr7 (180-344)||(28687587-28687750)
chr7 (180-354)||(7732482-7732655)
chr7 (189-354)||(26026320-26026485)
chr7 (186-354)||(2758077-2758244)
chr7 (186-346)||(25637197-25637357)
chr7 (186-354)||(16081678-16081845)
chr7 (181-279)||(16917708-16917806)
chr7 (187-354)||(39388645-39388813)
chr7 (182-353)||(24929683-24929858)
chr7 (180-354)||(26048326-26048498)
chr7 (189-354)||(28687878-28688041)
chr7 (186-354)||(9181788-9181958)
chr7 (192-345)||(35161189-35161342)
chr7 (186-354)||(48247587-48247758)
chr7 (186-354)||(34595151-34595318)
chr7 (189-354)||(26047960-26048115)
chr7 (189-354)||(787161-787329)
chr7 (189-354)||(11973781-11973945)
chr7 (188-278)||(5334273-5334363)
chr7 (186-279)||(5333880-5333973)
chr7 (187-347)||(9394117-9394274)
chr7 (186-352)||(5746020-5746186)
chr7 (186-274)||(39136991-39137079)
chr7 (193-277)||(35160660-35160746)
chr7 (181-276)||(39136681-39136776)
chr7 (212-354)||(14311341-14311483)
chr7 (184-345)||(4477700-4477860)
chr7 (186-276)||(49064034-49064124)
chr7 (181-251)||(40669689-40669759)
chr7 (175-269)||(35288891-35288986)
chr7 (186-276)||(45815344-45815431)
chr7 (186-269)||(2658839-2658922)
chr7 (189-240)||(5184431-5184482)
chr7 (291-354)||(35160906-35160968)
chr7 (195-277)||(18535338-18535419)
chr7 (287-349)||(33880969-33881030)
chr7 (181-239)||(38859133-38859191)
chr7 (186-276)||(49064176-49064266)
chr7 (186-239)||(19590525-19590578)
chr7 (176-272)||(33880609-33880706)
chr7 (188-233)||(34594585-34594630)
chr7 (189-266)||(35578902-35578979)
chr7 (188-268)||(9393738-9393818)
[»] chr2 (66 HSPs)
chr2 (186-354)||(11539637-11539805)
chr2 (186-354)||(33920990-33921158)
chr2 (186-354)||(20127736-20127904)
chr2 (186-354)||(43160389-43160557)
chr2 (186-354)||(38008330-38008497)
chr2 (186-354)||(6949451-6949619)
chr2 (181-354)||(42192235-42192407)
chr2 (180-354)||(62951-63124)
chr2 (186-354)||(4356135-4356302)
chr2 (186-354)||(4809258-4809425)
chr2 (186-353)||(16952935-16953103)
chr2 (186-353)||(17060906-17061074)
chr2 (186-354)||(42192621-42192789)
chr2 (180-354)||(38007944-38008118)
chr2 (189-354)||(13315496-13315664)
chr2 (190-354)||(16175728-16175892)
chr2 (189-354)||(15551053-15551218)
chr2 (180-354)||(20128116-20128289)
chr2 (186-352)||(44219644-44219809)
chr2 (186-354)||(11540017-11540184)
chr2 (184-354)||(4355753-4355922)
chr2 (189-354)||(9330173-9330338)
chr2 (189-354)||(15550676-15550841)
chr2 (189-351)||(33920615-33920776)
chr2 (186-354)||(13399799-13399965)
chr2 (187-354)||(16953313-16953479)
chr2 (186-278)||(5560051-5560143)
chr2 (186-354)||(43216088-43216255)
chr2 (186-348)||(24140064-24140220)
chr2 (212-354)||(4808905-4809046)
chr2 (189-354)||(63337-63507)
chr2 (186-354)||(32418159-32418324)
chr2 (189-354)||(43160012-43160177)
chr2 (186-351)||(649527-649690)
chr2 (188-268)||(649801-649881)
chr2 (218-354)||(13399454-13399589)
chr2 (186-354)||(44220022-44220191)
chr2 (182-325)||(6949850-6949994)
chr2 (178-329)||(32418550-32418700)
chr2 (186-345)||(31797166-31797323)
chr2 (186-278)||(25336054-25336146)
chr2 (186-347)||(28143416-28143575)
chr2 (287-354)||(5560929-5560996)
chr2 (189-248)||(9329915-9329974)
chr2 (287-354)||(43215809-43215876)
chr2 (186-272)||(14942306-14942392)
chr2 (189-276)||(20495196-20495283)
chr2 (226-276)||(5035903-5035953)
chr2 (184-269)||(35779706-35779791)
chr2 (196-272)||(2190536-2190612)
chr2 (291-349)||(9329985-9330043)
chr2 (181-239)||(20440523-20440581)
chr2 (288-354)||(22445741-22445807)
chr2 (186-239)||(20444749-20444802)
chr2 (181-237)||(28616608-28616664)
chr2 (189-247)||(9329833-9329892)
chr2 (186-269)||(28617076-28617159)
chr2 (181-239)||(26538571-26538629)
chr2 (186-239)||(1978601-1978654)
chr2 (180-269)||(18451293-18451382)
chr2 (189-261)||(3824179-3824251)
chr2 (189-261)||(8425358-8425430)
chr2 (186-238)||(18450830-18450882)
chr2 (291-347)||(18450935-18450991)
chr2 (180-272)||(22445633-22445724)
chr2 (185-261)||(43058332-43058408)
[»] chr8 (46 HSPs)
chr8 (183-354)||(18049587-18049758)
chr8 (189-354)||(18428140-18428305)
chr8 (188-354)||(28254427-28254593)
chr8 (179-354)||(15256207-15256384)
chr8 (186-354)||(599877-600044)
chr8 (181-354)||(34799074-34799247)
chr8 (186-349)||(5730817-5730979)
chr8 (184-354)||(9797105-9797275)
chr8 (187-354)||(28254805-28254971)
chr8 (186-354)||(16578475-16578642)
chr8 (186-318)||(41260271-41260402)
chr8 (187-354)||(42035773-42035939)
chr8 (183-354)||(9796723-9796893)
chr8 (188-354)||(2208716-2208882)
chr8 (180-354)||(6115489-6115663)
chr8 (186-354)||(35427191-35427358)
chr8 (186-351)||(599532-599696)
chr8 (186-318)||(15255853-15255984)
chr8 (186-354)||(41260640-41260807)
chr8 (184-354)||(7910995-7911164)
chr8 (189-354)||(35694249-35694421)
chr8 (178-354)||(16578100-16578276)
chr8 (189-354)||(18049970-18050134)
chr8 (186-354)||(34799462-34799629)
chr8 (212-354)||(5731191-5731332)
chr8 (187-354)||(35693869-35694037)
chr8 (215-354)||(26252838-26252976)
chr8 (212-354)||(42036150-42036292)
chr8 (186-354)||(7910616-7910784)
chr8 (186-276)||(9930112-9930202)
chr8 (189-239)||(35426845-35426895)
chr8 (186-279)||(18674148-18674241)
chr8 (291-354)||(35426917-35426980)
chr8 (189-267)||(28877354-28877432)
chr8 (304-354)||(35163815-35163865)
chr8 (189-261)||(18805167-18805238)
chr8 (193-276)||(28876910-28876993)
chr8 (186-237)||(33742922-33742973)
chr8 (180-239)||(34541040-34541099)
chr8 (181-231)||(9178135-9178185)
chr8 (177-239)||(41681125-41681187)
chr8 (186-239)||(44831247-44831300)
chr8 (181-237)||(11656450-11656506)
chr8 (186-238)||(11656950-11657002)
chr8 (186-238)||(31133220-31133272)
chr8 (185-261)||(41681604-41681680)
[»] chr5 (50 HSPs)
chr5 (186-354)||(28290023-28290190)
chr5 (181-354)||(19291351-19291524)
chr5 (187-352)||(8419002-8419165)
chr5 (186-354)||(15029688-15029855)
chr5 (174-354)||(38901021-38901198)
chr5 (186-318)||(18149733-18149864)
chr5 (186-354)||(4967148-4967317)
chr5 (186-354)||(18150102-18150270)
chr5 (186-354)||(28289684-28289851)
chr5 (186-354)||(15115474-15115638)
chr5 (188-352)||(39083361-39083525)
chr5 (181-354)||(21371075-21371247)
chr5 (190-343)||(38900648-38900800)
chr5 (224-354)||(5161620-5161750)
chr5 (189-266)||(14340401-14340478)
chr5 (187-354)||(32697602-32697771)
chr5 (189-354)||(4966819-4966982)
chr5 (189-276)||(21370689-21370776)
chr5 (109-178)||(31618967-31619036)
chr5 (189-354)||(14340786-14340953)
chr5 (187-347)||(10721787-10721945)
chr5 (186-276)||(22651767-22651857)
chr5 (188-354)||(22651347-22651512)
chr5 (186-347)||(41834445-41834605)
chr5 (189-276)||(20266371-20266458)
chr5 (186-279)||(16752582-16752675)
chr5 (186-347)||(27307061-27307220)
chr5 (186-325)||(5161976-5162115)
chr5 (186-276)||(17260676-17260766)
chr5 (181-279)||(27307513-27307611)
chr5 (212-347)||(32305844-32305977)
chr5 (186-267)||(28495296-28495377)
chr5 (184-239)||(164189-164244)
chr5 (287-354)||(14340480-14340547)
chr5 (186-239)||(24362328-24362381)
chr5 (185-269)||(8647437-8647521)
chr5 (185-261)||(19359135-19359211)
chr5 (188-276)||(28595182-28595270)
chr5 (184-239)||(5819421-5819476)
chr5 (180-239)||(18183461-18183520)
chr5 (187-347)||(28494845-28495003)
chr5 (186-236)||(15708971-15709021)
chr5 (287-329)||(21370794-21370836)
chr5 (186-239)||(2865247-2865300)
chr5 (188-257)||(16753045-16753114)
chr5 (186-239)||(19359628-19359681)
chr5 (186-239)||(24331559-24331612)
chr5 (185-269)||(4623147-4623231)
chr5 (212-276)||(13557018-13557081)
chr5 (179-239)||(15372365-15372425)
[»] chr4 (68 HSPs)
chr4 (183-354)||(34789379-34789549)
chr4 (184-354)||(21034233-21034403)
chr4 (180-354)||(56077703-56077876)
chr4 (186-354)||(26974283-26974451)
chr4 (189-354)||(45838926-45839092)
chr4 (183-354)||(28465460-28465630)
chr4 (186-354)||(14440207-14440374)
chr4 (188-354)||(54440948-54441113)
chr4 (186-353)||(12593024-12593190)
chr4 (189-354)||(41114160-41114326)
chr4 (189-346)||(28166007-28166163)
chr4 (186-354)||(46736655-46736822)
chr4 (188-354)||(34789761-34789927)
chr4 (186-350)||(19528869-19529033)
chr4 (189-354)||(34807518-34807682)
chr4 (186-354)||(46737034-46737201)
chr4 (186-352)||(55677338-55677504)
chr4 (189-354)||(6616675-6616840)
chr4 (189-354)||(14439831-14439995)
chr4 (186-354)||(21034615-21034783)
chr4 (186-354)||(34807116-34807284)
chr4 (186-354)||(33689829-33689995)
chr4 (180-354)||(12593402-12593575)
chr4 (179-354)||(28465074-28465248)
chr4 (188-354)||(54440573-54440736)
chr4 (180-354)||(45838541-45838714)
chr4 (180-354)||(19529072-19529246)
chr4 (188-354)||(24851844-24852010)
chr4 (189-354)||(36168332-36168499)
chr4 (186-277)||(24851316-24851407)
chr4 (180-354)||(36168710-36168883)
chr4 (180-354)||(35643549-35643734)
chr4 (189-354)||(41608377-41608542)
chr4 (186-277)||(41608870-41608961)
chr4 (188-274)||(1397597-1397683)
chr4 (189-279)||(33777635-33777725)
chr4 (212-347)||(35193334-35193467)
chr4 (189-354)||(16214874-16215038)
chr4 (212-279)||(17504412-17504479)
chr4 (183-278)||(30597973-30598068)
chr4 (182-318)||(33778027-33778162)
chr4 (189-354)||(229538-229702)
chr4 (212-325)||(6617070-6617182)
chr4 (180-313)||(26974664-26974797)
chr4 (189-276)||(229164-229251)
chr4 (287-354)||(24851565-24851632)
chr4 (188-259)||(44219377-44219448)
chr4 (187-353)||(18965141-18965306)
chr4 (187-276)||(23986521-23986610)
chr4 (186-347)||(17503974-17504133)
chr4 (180-239)||(11153639-11153698)
chr4 (186-268)||(35193766-35193848)
chr4 (182-268)||(40160554-40160640)
chr4 (186-276)||(51309961-51310051)
chr4 (189-266)||(10795777-10795854)
chr4 (188-261)||(24336234-24336307)
chr4 (186-279)||(40160094-40160187)
chr4 (187-239)||(20958351-20958403)
chr4 (188-252)||(35644042-35644106)
chr4 (184-239)||(16691563-16691618)
chr4 (186-261)||(24335761-24335836)
chr4 (181-239)||(22434174-22434232)
chr4 (185-239)||(46193404-46193458)
chr4 (186-239)||(15523235-15523288)
chr4 (186-239)||(23494935-23494988)
chr4 (186-239)||(25938163-25938216)
chr4 (191-260)||(31297161-31297230)
chr4 (188-260)||(51641302-51641374)
[»] chr6 (40 HSPs)
chr6 (185-354)||(25472391-25472560)
chr6 (186-354)||(5114468-5114635)
chr6 (181-354)||(30251070-30251243)
chr6 (180-354)||(31573714-31573892)
chr6 (189-354)||(24640564-24640728)
chr6 (180-354)||(31073521-31073694)
chr6 (181-354)||(5120848-5121020)
chr6 (189-354)||(25468852-25469018)
chr6 (186-354)||(29891459-29891630)
chr6 (186-354)||(31574104-31574271)
chr6 (185-327)||(31073142-31073290)
chr6 (184-318)||(28636290-28636422)
chr6 (186-354)||(29891080-29891247)
chr6 (259-354)||(28636575-28636669)
chr6 (186-347)||(35163572-35163733)
chr6 (183-239)||(22534217-22534273)
chr6 (181-347)||(32836383-32836547)
chr6 (287-352)||(30250791-30250856)
chr6 (175-258)||(31242795-31242878)
chr6 (180-237)||(10900424-10900481)
chr6 (189-268)||(35163187-35163266)
chr6 (182-240)||(30250717-30250775)
chr6 (186-239)||(28472637-28472690)
chr6 (186-239)||(29859826-29859879)
chr6 (189-269)||(3835188-3835268)
chr6 (179-262)||(835695-835778)
chr6 (186-261)||(11445457-11445532)
chr6 (184-239)||(18257629-18257684)
chr6 (188-259)||(18297662-18297733)
chr6 (186-269)||(20741100-20741183)
chr6 (186-261)||(23073999-23074074)
chr6 (189-268)||(32836010-32836089)
chr6 (186-276)||(835394-835484)
chr6 (184-237)||(4811370-4811423)
chr6 (182-239)||(11277074-11277131)
chr6 (186-239)||(12935157-12935210)
chr6 (186-239)||(22219845-22219898)
chr6 (180-261)||(33096082-33096163)
chr6 (189-261)||(18504922-18504994)
chr6 (188-276)||(33095716-33095804)
[»] chr3 (84 HSPs)
chr3 (184-353)||(51828337-51828506)
chr3 (186-354)||(47431696-47431864)
chr3 (189-354)||(51473234-51473399)
chr3 (186-354)||(41998229-41998397)
chr3 (186-354)||(2051295-2051466)
chr3 (184-354)||(43678293-43678462)
chr3 (189-354)||(49951549-49951713)
chr3 (186-354)||(38535309-38535476)
chr3 (187-354)||(46013801-46013968)
chr3 (190-354)||(55389609-55389772)
chr3 (183-354)||(51828919-51829089)
chr3 (188-354)||(32730768-32730933)
chr3 (180-353)||(40839032-40839204)
chr3 (185-354)||(50662791-50662959)
chr3 (189-354)||(44676851-44677015)
chr3 (186-354)||(16701168-16701338)
chr3 (185-354)||(40275092-40275262)
chr3 (186-325)||(49720769-49720907)
chr3 (179-354)||(52375320-52375494)
chr3 (188-354)||(52237196-52237361)
chr3 (186-354)||(51828539-51828707)
chr3 (186-354)||(330215-330382)
chr3 (188-351)||(30513724-30513886)
chr3 (186-354)||(51827957-51828124)
chr3 (186-354)||(52375710-52375877)
chr3 (189-348)||(22370599-22370758)
chr3 (186-354)||(49720371-49720538)
chr3 (183-354)||(40275473-40275642)
chr3 (176-354)||(55389976-55390154)
chr3 (180-318)||(329840-329977)
chr3 (186-354)||(25534890-25535058)
chr3 (189-354)||(40838655-40838819)
chr3 (182-354)||(49951925-49952096)
chr3 (180-279)||(14654193-14654292)
chr3 (186-354)||(34104638-34104804)
chr3 (186-354)||(14654570-14654735)
chr3 (182-351)||(44676468-44676636)
chr3 (192-354)||(34105027-34105190)
chr3 (186-354)||(38535674-38535841)
chr3 (186-354)||(46013422-46013589)
chr3 (188-352)||(52236818-52236981)
chr3 (186-354)||(51472855-51473022)
chr3 (186-354)||(2044271-2044438)
chr3 (185-354)||(43678663-43678831)
chr3 (189-348)||(32730392-32730550)
chr3 (189-313)||(16689361-16689484)
chr3 (186-312)||(41998650-41998774)
chr3 (187-354)||(43222768-43222935)
chr3 (180-354)||(43222384-43222557)
chr3 (199-271)||(39010482-39010554)
chr3 (188-347)||(36701482-36701640)
chr3 (186-277)||(33412609-33412700)
chr3 (186-276)||(36701106-36701196)
chr3 (186-354)||(39010075-39010241)
chr3 (183-347)||(55192115-55192277)
chr3 (187-347)||(37075687-37075848)
chr3 (186-279)||(49407796-49407889)
chr3 (186-279)||(50900980-50901073)
chr3 (186-347)||(27200078-27200237)
chr3 (189-279)||(27199705-27199795)
chr3 (187-347)||(49408169-49408326)
chr3 (178-239)||(30104474-30104535)
chr3 (187-268)||(37076138-37076219)
chr3 (186-347)||(5137365-5137526)
chr3 (188-268)||(50900534-50900614)
chr3 (186-261)||(20840560-20840635)
chr3 (180-239)||(32535455-32535514)
chr3 (180-239)||(37727422-37727481)
chr3 (182-269)||(39556039-39556126)
chr3 (213-279)||(8874139-8874205)
chr3 (186-239)||(23644462-23644515)
chr3 (172-261)||(25612447-25612536)
chr3 (175-239)||(29801908-29801972)
chr3 (180-239)||(24301048-24301107)
chr3 (186-269)||(39555578-39555661)
chr3 (189-347)||(8873694-8873850)
chr3 (184-261)||(12141162-12141239)
chr3 (180-261)||(23644935-23645016)
chr3 (186-239)||(27393661-27393714)
chr3 (186-239)||(31779144-31779197)
chr3 (189-237)||(5136983-5137031)
chr3 (185-237)||(25853233-25853285)
chr3 (287-347)||(37847206-37847265)
chr3 (186-234)||(43973441-43973489)
[»] chr1 (70 HSPs)
chr1 (188-354)||(34555759-34555926)
chr1 (185-354)||(10278929-10279094)
chr1 (186-351)||(37505067-37505232)
chr1 (186-350)||(9992154-9992318)
chr1 (189-354)||(21938566-21938730)
chr1 (184-354)||(9992534-9992703)
chr1 (10-110)||(43663219-43663319)
chr1 (186-354)||(30786771-30786939)
chr1 (188-354)||(10278550-10278716)
chr1 (187-354)||(44954605-44954771)
chr1 (181-354)||(16299061-16299232)
chr1 (189-354)||(17641743-17641912)
chr1 (180-353)||(50305162-50305337)
chr1 (186-354)||(52335889-52336056)
chr1 (180-354)||(37505447-37505619)
chr1 (186-354)||(1837505-1837672)
chr1 (186-354)||(2868087-2868254)
chr1 (181-353)||(8229632-8229806)
chr1 (188-354)||(44582436-44582603)
chr1 (186-354)||(34555379-34555548)
chr1 (182-354)||(23340179-23340350)
chr1 (189-354)||(44954229-44954393)
chr1 (188-353)||(2867913-2868077)
chr1 (186-354)||(4080021-4080188)
chr1 (189-354)||(8230020-8230184)
chr1 (186-354)||(29438930-29439098)
chr1 (189-279)||(37421397-37421488)
chr1 (189-279)||(29439375-29439465)
chr1 (187-354)||(16298683-16298849)
chr1 (186-279)||(30787251-30787344)
chr1 (189-354)||(37421163-37421329)
chr1 (188-354)||(1744330-1744494)
chr1 (184-354)||(443930-444099)
chr1 (189-347)||(39485068-39485224)
chr1 (188-354)||(44582059-44582224)
chr1 (189-347)||(45048158-45048314)
chr1 (188-279)||(50304441-50304532)
chr1 (189-354)||(6224700-6224866)
chr1 (224-354)||(17641403-17641532)
chr1 (186-276)||(50926697-50926787)
chr1 (187-276)||(23526659-23526748)
chr1 (186-354)||(29021243-29021411)
chr1 (188-276)||(50926232-50926320)
chr1 (185-350)||(9833535-9833699)
chr1 (186-278)||(17088593-17088685)
chr1 (180-276)||(44291295-44291391)
chr1 (180-276)||(44802627-44802723)
chr1 (183-275)||(25274753-25274845)
chr1 (189-268)||(45048599-45048678)
chr1 (182-272)||(29020876-29020966)
chr1 (291-353)||(30787152-30787214)
chr1 (178-239)||(29870111-29870172)
chr1 (186-259)||(39843497-39843570)
chr1 (189-266)||(44291777-44291854)
chr1 (188-276)||(23526986-23527074)
chr1 (189-269)||(50419393-50419473)
chr1 (180-239)||(33144411-33144470)
chr1 (186-261)||(50419731-50419806)
chr1 (186-268)||(17088146-17088228)
chr1 (181-239)||(26859054-26859112)
chr1 (185-239)||(29307434-29307488)
chr1 (186-239)||(5540310-5540363)
chr1 (182-239)||(8679033-8679090)
chr1 (186-239)||(18984611-18984664)
chr1 (186-239)||(39154512-39154565)
chr1 (186-239)||(50970278-50970331)
chr1 (186-239)||(52268290-52268343)
chr1 (187-239)||(5539817-5539869)
chr1 (187-239)||(8678542-8678594)
chr1 (184-260)||(9844742-9844818)
[»] scaffold0712 (2 HSPs)
scaffold0712 (185-354)||(6391-6559)
scaffold0712 (189-354)||(6770-6939)
[»] scaffold0709 (2 HSPs)
scaffold0709 (185-354)||(6409-6577)
scaffold0709 (189-354)||(6788-6957)
[»] scaffold0097 (2 HSPs)
scaffold0097 (180-354)||(46646-46820)
scaffold0097 (186-354)||(46266-46434)
[»] scaffold0007 (4 HSPs)
scaffold0007 (186-276)||(210793-210883)
scaffold0007 (188-276)||(205823-205911)
scaffold0007 (189-276)||(204931-205018)
scaffold0007 (189-276)||(205361-205448)
[»] scaffold0025 (1 HSPs)
scaffold0025 (287-354)||(78417-78484)
[»] scaffold1432 (1 HSPs)
scaffold1432 (186-279)||(518-611)
[»] scaffold0951 (1 HSPs)
scaffold0951 (186-239)||(1667-1720)
[»] scaffold0108 (1 HSPs)
scaffold0108 (185-276)||(15554-15645)
[»] scaffold0176 (1 HSPs)
scaffold0176 (181-231)||(19121-19171)
[»] scaffold0057 (1 HSPs)
scaffold0057 (189-263)||(61926-62000)
[»] scaffold0021 (1 HSPs)
scaffold0021 (186-276)||(159337-159427)


Alignment Details
Target: chr7 (Bit Score: 125; Significance: 2e-64; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 181 - 354
Target Start/End: Complemental strand, 48248143 - 48247970
Alignment:
Q  181 tttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgn 280  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  48248143 ttttaggcttaattacacttttggtcctaccattttgaccaactcacaaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgt 48248044  T
Q  281 nnnnnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
          ||||||||||||| ||||||||||||| |||| |||||||||| ||||||||||||||||||||||||    
T  48248043 ttttttgcagttttagtcccatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaacc 48247970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 188 - 354
Target Start/End: Original strand, 9181534 - 9181699
Alignment:
Q  188 cttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnng 287  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |    
T  9181534 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatat-tttttttg 9181632  T
Q  288 cagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    |||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||    
T  9181633 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaacc 9181699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 189 - 354
Target Start/End: Complemental strand, 25637741 - 25637577
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnngc 288  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||    
T  25637741 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttttgc 25637643  T
Q  289 agttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    ||||||||||||||||||||||||| |||| ||||||| || ||||||||||||||||||||||||    
T  25637642 agttttagtcctatctccctatttccaactccagaaacacacagaaatgacagttttagtccaacc 25637577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 187 - 354
Target Start/End: Original strand, 15712366 - 15712532
Alignment:
Q  187 gcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnn 286  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            
T  15712366 gcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatat-atttttt 15712464  T
Q  287 gcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    | ||||||||||||||||||||||||| ||||  ||||||||| | ||||||||||||||||||||||    
T  15712465 gtagttttagtcctatctccctatttccaactctagaaacgcacataaatgacagttttagtccaacc 15712532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 186 - 354
Target Start/End: Original strand, 16081299 - 16081466
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    ||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||          
T  16081299 ggcttaattacacttttggtccttctattttgaccaactcatggaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatttg-ttttt 16081397  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     |||||||||||||||||| |||||||| |||| || |||| || ||||||||||||||||||||||||    
T  16081398 tgcagttttagtcctatctacctatttccaactccaaaaacacacagaaatgacagttttagtccaacc 16081466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 189 - 354
Target Start/End: Complemental strand, 26026861 - 26026697
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnngc 288  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||| | |||||||||||||||       ||    
T  26026861 ttaattacacttttggtcctactattttgacaaattcacgaaaatggtcctatcttttataaatcgaacaaaaccatccttaaactatatg-ttttttgc 26026763  T
Q  289 agttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    |||||||||  |||||||||||||| |||| || ||||||||||||||||||||||||||||||||    
T  26026762 agttttagttttatctccctatttccaactccaaaaacgcatagaaatgacagttttagtccaacc 26026697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 186 - 354
Target Start/End: Original strand, 786782 - 786950
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    |||||||||||||||||| |||| | |||||||||||||||||||||||||| || |||||||||||||||||||||  |||||||||||||||          
T  786782 ggcttaattacacttttgatccttccattttgaccaactcacgaaaatggtcataccttttttaaatcgaacaaaattttccttaaactatatgtttttt 786881  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     ||||||||||||||||||||||||||| |||| || ||||||| |||| ||||||||||||| |||||    
T  786882 tgcagttttagtcctatctccctatttccaactccataaacgcacagaagtgacagttttagttcaacc 786950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 189 - 354
Target Start/End: Original strand, 5745642 - 5745806
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnngc 288  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||       ||    
T  5745642 ttaattacacttttggtcctatcattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatctttcttaaactatatg-ttttttgc 5745740  T
Q  289 agttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    |||||||||| ||||||||||||||  ||| |||||||||| | ||||||||||||||||||||||    
T  5745741 agttttagtcttatctccctatttcctactccagaaacgcacataaatgacagttttagtccaacc 5745806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 182 - 354
Target Start/End: Original strand, 27245199 - 27245371
Alignment:
Q  182 ttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnn 281  Q
    |||||||||||||||||||||||||||   |||||||||||||||||||| |||||||| || |||||||||||||||||||||||  |||| |||||      
T  27245199 ttttggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccccaaaccatatgtt 27245298  T
Q  282 nnnnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
         |||||||||||||||||||| |||||| |||| |||||||||| |||||||| |||||||||||||||    
T  27245299 tttttgcagttttagtcctatctccttatttccaactccagaaacgcacagaaatgatagttttagtccaacc 27245371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 186 - 354
Target Start/End: Complemental strand, 7733033 - 7732866
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||          
T  7733033 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatgatcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttt 7732935  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     ||| ||||||||||||||||||||||  |||| || ||| ||| |||||| ||| || ||||||||||    
T  7732934 tgcaattttagtcctatctccctattttcaactccataaatgcacagaaataacaattctagtccaacc 7732866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 186 - 354
Target Start/End: Original strand, 11971334 - 11971505
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg---nnn 282  Q
    |||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  11971334 ggcttaattatacttttggtcctaccattttgacctactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 11971433  T
Q  283 nnnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
         |||||||||||||||||||||||||| || |  |||||| || | ||||||||||||||||||||||    
T  11971434 ttttacagttttagtcctatctccctatttccaattctagaaacacacataaatgacagttttagtccaacc 11971505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 188 - 354
Target Start/End: Complemental strand, 27245748 - 27245583
Alignment:
Q  188 cttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnng 287  Q
    |||||||| |||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||       |    
T  27245748 cttaattatacttttggtcttaccattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaattatatg-tattttg 27245650  T
Q  288 cagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    || |||||||| |||||||||||||| |||| |||||||||| |||||| | |||||||||||||||    
T  27245649 caattttagtcatatctccctatttccaactccagaaacgcacagaaatcatagttttagtccaacc 27245583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 189 - 354
Target Start/End: Complemental strand, 14311830 - 14311666
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnngc 288  Q
    |||||||||||||| ||| ||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||       ||    
T  14311830 ttaattacactttttgtcgtaccaatttgaccaactcacaaaaatggtcctatcttttttaaatcgaacaaaatcgtctttaaactatatg-ttttttgc 14311732  T
Q  289 agttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    |||||||||| |||||||||||||| ||||  ||||||||| |||||||||| |||||||||||||    
T  14311731 agttttagtcttatctccctatttccaactctagaaacgcacagaaatgacaattttagtccaacc 14311666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 180 - 344
Target Start/End: Original strand, 28687587 - 28687750
Alignment:
Q  180 ttttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 279  Q
    ||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||     
T  28687587 ttttttggcttaattacacttttggtcatatcattttgaccaactcacgaaaatggttctatcttttataaatcgaacaaaatcgtccttaaactatat- 28687685  T
Q  280 nnnnnnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttt 344  Q
           |||||| ||||||||||| |||||||| |||| |||||||||| | ||||||||||||    
T  28687686 tttttttgcagttctagtcctatcttcctatttccaactccagaaacgcacataaatgacagttt 28687750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 180 - 354
Target Start/End: Original strand, 7732482 - 7732655
Alignment:
Q  180 ttttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 279  Q
    ||||| |||||||||||| ||||||||||   ||||||| |||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||    
T  7732482 tttttaggcttaattacatttttggtccttgcattttgatcaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccttaaactatatg 7732581  T
Q  280 nnnnnnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
           ||||||||||||||||||||||||||  |||| || ||||||| | ||||||||||||||||||||||    
T  7732582 -ttttttgcagttttagtcctatctccctattttcaactccataaacgcacataaatgacagttttagtccaacc 7732655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 189 - 354
Target Start/End: Original strand, 26026320 - 26026485
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnngc 288  Q
    ||||||||||||||||||||  ||||||||||| ||||||||| ||||| || || ||||||||||||||||||||||| |||||||||||       ||    
T  26026320 ttaattacacttttggtccttgtattttgaccagctcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccataaactatatgtttttttgc 26026419  T
Q  289 agttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    |||||||||| |||||||||||||  |||| |||||||||| |||||||||||||||||| |||||    
T  26026420 agttttagtcttatctccctattttcaactccagaaacgcacagaaatgacagttttagttcaacc 26026485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 186 - 354
Target Start/End: Complemental strand, 2758244 - 2758077
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    |||||||||||||||||||||||   ||||||  ||||||||||||||||| ||| || ||||||||||||||||||||||| |||||||||||          
T  2758244 ggcttaattacacttttggtcctcgcattttgttcaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccataaactatatg-ttttt 2758146  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     |||| ||||||| |||| |||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  2758145 tgcaggtttagtcatatccccctatttctaactccagaaacgcatataaatgacagttttagtccaacc 2758077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 186 - 346
Target Start/End: Original strand, 25637197 - 25637357
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    |||||||||||||||||||||||   || |||||||||||| |||| |||||||| || ||||||||||||||||||||||| |||||||||||          
T  25637197 ggcttaattacacttttggtccttgcatattgaccaactcatgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt 25637296  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagtttta 346  Q
     | ||||||||||||||||||||||||| |||| |||||||||| | ||||||||||||||    
T  25637297 tgtagttttagtcctatctccctatttccaactccagaaacgcacataaatgacagtttta 25637357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 186 - 354
Target Start/End: Complemental strand, 16081845 - 16081678
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    ||||||||||||| |||||||||   |||||||||||||||||||| || ||||| || ||||||||||||||||||| ||| |||||||||||          
T  16081845 ggcttaattacacctttggtccttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcatccctaaactatatg-ttttt 16081747  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     ||||||||||||||||||||||||||| |||| || ||||||| | ||||||||||||||||||||||    
T  16081746 tgcagttttagtcctatctccctatttccaactccaaaaacgcacaaaaatgacagttttagtccaacc 16081678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 181 - 279
Target Start/End: Original strand, 16917708 - 16917806
Alignment:
Q  181 tttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 279  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  16917708 ttttaggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatg 16917806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 187 - 354
Target Start/End: Complemental strand, 39388813 - 39388645
Alignment:
Q  187 gcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnn 286  Q
    ||||||||||||||||||||||   |||||||||||||||||||| | |||||| || ||||||||||||||||||||||  |||||||||||           
T  39388813 gcttaattacacttttggtccttgcattttgaccaactcacgaaatttgtcctacctcttttaaatcgaacaaaatcgtctctaaactatatgttttttt 39388714  T
Q  287 gcagttttagtcctatctccctatttctaactacagaaacgca-tagaaatgacagttttagtccaacc 354  Q
    ||||||||||||||||||||||||||  |||| || |||||||  | ||||||||||||||||||||||    
T  39388713 gcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaaatgacagttttagtccaacc 39388645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 182 - 353
Target Start/End: Complemental strand, 24929858 - 24929683
Alignment:
Q  182 ttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaac----tata 277  Q
    |||||||||||||||| ||||||||||   |||||||||||||||||||| ||||| || || ||||||||| ||||||||||||| |||||    ||||    
T  24929858 ttttggcttaattacatttttggtccttgcattttgaccaactcacgaaattggtcttacctcttttaaatcaaacaaaatcgtccctaaactatatata 24929759  T
Q  278 tgnnnnnnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaac 353  Q
    |        ||||||||||||||||||||||||||| |||| || ||||||| |||||||||||||||||||||||    
T  24929758 tttttttttgcagttttagtcctatctccctatttccaactccaaaaacgcacagaaatgacagttttagtccaac 24929683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 180 - 354
Target Start/End: Complemental strand, 26048498 - 26048326
Alignment:
Q  180 ttttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 279  Q
    |||| ||||||||||||||||||| ||||    ||||||||||||||||||| |||||||| || ||||||||| |||||||| ||||||||||||||||    
T  26048498 ttttatggcttaattacacttttgttccttgcgttttgaccaactcacgaaattggtcctacctcttttaaatcaaacaaaattgtccttaaactatatg 26048399  T
Q  280 nnnnnnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
           |||||||||||| |||||||||||||| |||| || ||| ||| | ||||||||||||||||||||||    
T  26048398 --tttttgcagttttagtcatatctccctatttccaactccaaaaatgcacataaatgacagttttagtccaacc 26048326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 189 - 354
Target Start/End: Complemental strand, 28688041 - 28687878
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnngc 288  Q
    ||||||||| ||||||||||   |||||||||||||||||||| || || || || ||||||||||||||||||||||| |||||||||||       ||    
T  28688041 ttaattaca-ttttggtccttgcattttgaccaactcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt-gc 28687944  T
Q  289 agttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    | |||||||||||||| |||||||| |||| |||||||||| ||||||||||||||||||||||||    
T  28687943 acttttagtcctatcttcctatttccaactccagaaacgcacagaaatgacagttttagtccaacc 28687878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 186 - 354
Target Start/End: Complemental strand, 9181958 - 9181788
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    |||||||||||||||||| ||||   ||||||||||| |||||||| || || || || ||||||||||||||||||||||| |||||||||||          
T  9181958 ggcttaattacacttttgatccttgcattttgaccaattcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt 9181859  T
Q  286 ng--cagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
        |||||||||||||||||||||||||| |||| |||||||||| | ||||||||||||||||||||||    
T  9181858 tttccagttttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaacc 9181788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 192 - 345
Target Start/End: Complemental strand, 35161342 - 35161189
Alignment:
Q  192 attacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnngcagt 291  Q
    |||||||||||||||||   ||||||||||||||||| || |||||||| || ||||||||||||||||||||||| |||||||||||       |||||    
T  35161342 attacacttttggtccttgcattttgaccaactcacggaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttgcagt 35161243  T
Q  292 tttagtcctatctccctatttctaactacagaaacgcatagaaatgacagtttt 345  Q
    ||||||| |||||||||||||| |||| || ||||||| | |||||| ||||||    
T  35161242 tttagtcatatctccctatttccaactccataaacgcacataaatgatagtttt 35161189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 186 - 354
Target Start/End: Original strand, 48247587 - 48247758
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactata---tgnnn 282  Q
    |||||||||||||||||||||||   ||||||| |||||||||||| |||||||| || ||||||||| ||||||||||||| |||| ||||   |        
T  48247587 ggcttaattacacttttggtccttgcattttgatcaactcacgaaattggtcctacctcttttaaatcaaacaaaatcgtccctaaagtatatatttttt 48247686  T
Q  283 nnnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
        |||||||||||| |||||||||||||| |||| || ||||||| ||||||||||||||||||||||||    
T  48247687 ttttgcagttttagtcatatctccctatttccaactccaaaaacgcacagaaatgacagttttagtccaacc 48247758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 186 - 354
Target Start/End: Complemental strand, 34595318 - 34595151
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgnnnnn 284  Q
    |||||||||||||||||||||||   ||||||||||||||||||||||||||||   | ||||||||||||||||||||||| |||||||| |||         
T  34595318 ggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctgcatcttttaaatcgaacaaaatcgtccctaaactatcatg--ttt 34595221  T
Q  285 nngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
      ||||||||||| ||| | || |||||  |||| |||||||||| ||||||||||||||||||||||||    
T  34595220 ttgcagttttagtgctacccccttattttcaactccagaaacgcacagaaatgacagttttagtccaacc 34595151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 189 - 354
Target Start/End: Original strand, 26047960 - 26048115
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnngc 288  Q
    ||||||||||||||| | |||| |||| ||||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||              
T  26047960 ttaattacacttttgattctaccatttcgaccaactcacgaaaatggtcatatcttttttaaatcgaataaaattgtccttaaactatat---------- 26048049  T
Q  289 agttttagt-cctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     |||||  | ||||| |||||||||| |||| |||||||||| ||||||||||||||||||||||||    
T  26048050 -gttttgttgcctatgtccctatttccaactccagaaacgcacagaaatgacagttttagtccaacc 26048115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 189 - 354
Target Start/End: Complemental strand, 787329 - 787161
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg---nnnnnn 285  Q
    ||||||||||||||||| ||  |||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| ||             
T  787329 ttaattacacttttggtgctcgtattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaactatttgtttttaatt 787230  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     | |||||||||| ||||| | |||||  |||| |||||||||| | |||||| |||||||||||||||    
T  787229 tgtagttttagtcttatcttcatattttcaactccagaaacgcacataaatgatagttttagtccaacc 787161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 189 - 354
Target Start/End: Complemental strand, 11973945 - 11973781
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnngc 288  Q
    ||||||||| ||||||||||   ||||||||||||  |||||| |||| ||| || |||||||| |||||||||||||| |||| || |||       ||    
T  11973945 ttaattacatttttggtccttgcattttgaccaacgtacgaaattggttctacctcttttaaattgaacaaaatcgtccctaaattaaatggttttt-gc 11973847  T
Q  289 agttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    ||||||||| |||||| |||||||| |||| |||||||||| ||||||||||||||||||||||||    
T  11973846 agttttagttctatcttcctatttccaacttcagaaacgcacagaaatgacagttttagtccaacc 11973781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 188 - 278
Target Start/End: Complemental strand, 5334363 - 5334273
Alignment:
Q  188 cttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatat 278  Q
    |||||||||||||||||||||   |||||||||||||||||||||| |||||| || ||||||||||||||||||||||| ||||||||||    
T  5334363 cttaattacacttttggtcctcacattttgaccaactcacgaaaatagtcctacctcttttaaatcgaacaaaatcgtccctaaactatat 5334273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 186 - 279
Target Start/End: Original strand, 5333880 - 5333973
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 279  Q
    |||||||||||||||||| ||||   |||||||||||||||||||||||||| || || ||||||||||||||||||||||| |||||||||||    
T  5333880 ggcttaattacacttttgatccttgcattttgaccaactcacgaaaatggtcgtacctcttttaaatcgaacaaaatcgtccctaaactatatg 5333973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 187 - 347
Target Start/End: Complemental strand, 9394274 - 9394117
Alignment:
Q  187 gcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnn 286  Q
    ||||||||||||||||||||   | |||||||||| ||||| |||||||||||| |||||| ||||||||||||| ||||| ||||||||||            
T  9394274 gcttaattacacttttggtctcgc-attttgaccagctcacaaaaatggtcctacctttttcaaatcgaacaaaaccgtccctaaactatat-atttttt 9394177  T
Q  287 gcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttag 347  Q
    |||||||||||||||||| |||||||| |||| || |||| || |||||||||||||||||    
T  9394176 gcagttttagtcctatct-cctatttccaacttcaaaaacacaaagaaatgacagttttag 9394117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 186 - 352
Target Start/End: Complemental strand, 5746186 - 5746020
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-nnnnn 284  Q
    |||||||||||||||||||||||   |||||||| ||||||||||| || | ||  || ||||||||||||||||| ||||| |||||||||||          
T  5746186 ggcttaattacacttttggtccttgcattttgactaactcacgaaattgat-ctgcctcttttaaatcgaacaaaaccgtccataaactatatgtttttt 5746088  T
Q  285 nngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaa 352  Q
      ||| |||||||| |||||||||||||| |||| || ||||||| | ||||||||||||||||||||    
T  5746087 ttgcaattttagtcttatctccctatttccaactccataaacgcacataaatgacagttttagtccaa 5746020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 186 - 274
Target Start/End: Complemental strand, 39137079 - 39136991
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaact 274  Q
    |||||||||||||||||| ||||  ||||||||||  |||||||||||||||||  || ||||||||||||||||||||||| ||||||    
T  39137079 ggcttaattacacttttgatcctcgtattttgacccgctcacgaaaatggtcctgcctcttttaaatcgaacaaaatcgtccataaact 39136991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 193 - 277
Target Start/End: Original strand, 35160660 - 35160746
Alignment:
Q  193 ttacacttttggtcctactattttgaccaactcacgaaaatggtccta--tcttttttaaatcgaacaaaatcgtccttaaactata 277  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||  | ||||||||||||||| ||||||| |||||| ||||    
T  35160660 ttacacttttggtcctaccattttgaccaactcacgaaaatggtcatattttttttttaaatcgaactaaatcgttcttaaattata 35160746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 276
Target Start/End: Original strand, 39136681 - 39136776
Alignment:
Q  181 tttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 276  Q
    |||| |||||||||||||||||| ||||   |||||||||| |||||||||||||| ||  || ||| ||||||||||||||||||| ||||||||    
T  39136681 ttttaggcttaattacacttttgatccttgcattttgaccagctcacgaaaatggttctgactctttcaaatcgaacaaaatcgtccctaaactat 39136776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 212 - 354
Target Start/End: Original strand, 14311341 - 14311483
Alignment:
Q  212 attttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnngcagttttagtcctatctccctatt 311  Q
    ||||| |||||||||  ||| ||||  || || |||||||| ||| |||||||||| |||||||||||        |||||||| |||||||||||||||    
T  14311341 attttaaccaactcataaaattggttatacctcttttaaattgaataaaatcgtccctaaactatatgtttttttacagttttaatcctatctccctatt 14311440  T
Q  312 tctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    || |||| || |||| || | ||||||||||||||||||||||    
T  14311441 tccaactccataaacacacataaatgacagttttagtccaacc 14311483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 345
Target Start/End: Original strand, 4477700 - 4477860
Alignment:
Q  184 ttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgnnn 282  Q
    |||||||||||||||| ||| ||||   ||||||||||| |||||||||||||||   || |||||||| ||| |||||||||| |||||||| |||       
T  4477700 ttggcttaattacactattgatccttacattttgaccaattcacgaaaatggtcccgcctcttttaaattgaataaaatcgtccctaaactatcatg--t 4477797  T
Q  283 nnnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagtttt 345  Q
        ||||||||||||||| ||||   |||| |||| ||||||||||  ||||||||||||||    
T  4477798 ttttgcagttttagtcctacctcctattttcaaactccagaaacgcagggaaatgacagtttt 4477860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 276
Target Start/End: Original strand, 49064034 - 49064124
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 276  Q
    |||||||||||||||||||||||  ||||||||||| ||||||||||||||  |  || ||| |||| |||||||||| ||| ||||||||    
T  49064034 ggcttaattacacttttggtcctcgtattttgaccagctcacgaaaatggtattgcctctttcaaatagaacaaaatcttccataaactat 49064124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 251
Target Start/End: Complemental strand, 40669759 - 40669689
Alignment:
Q  181 tttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaa 251  Q
    ||||||| ||||||||||||||| |||| | ||||||||||||||||||||||| || ||  |||||||||    
T  40669759 tttttggtttaattacacttttgatccttccattttgaccaactcacgaaaatgatcatactttttttaaa 40669689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 269
Target Start/End: Original strand, 35288891 - 35288986
Alignment:
Q  175 taatattt-tttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtcctt 269  Q
    |||||||| |||||||||||||||||||||||| |  ||||||| || |||||||||| |||||||  | |||| |||  ||||||||| ||||||    
T  35288891 taatatttatttggcttaattacacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtcctt 35288986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 276
Target Start/End: Original strand, 45815344 - 45815431
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 276  Q
    |||||||||||||||||||||||   |||||||||| ||   |||||||||| |  || ||| ||||||||||||| ||||| ||||||||    
T  45815344 ggcttaattacacttttggtccttgcattttgaccagct---gaaaatggtcatgcctctttcaaatcgaacaaaaccgtccctaaactat 45815431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 2658839 - 2658922
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtcctt 269  Q
    ||||||||||||||||| |||||  | ||||| || |||||||||| |||||||  | |||| |||| ||||||||| ||||||    
T  2658839 ggcttaattacactttttgtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtcctt 2658922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 189 - 240
Target Start/End: Original strand, 5184431 - 5184482
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtccta 240  Q
    ||||||||| ||||||||||   |||||||||||||||||||| ||||||||    
T  5184431 ttaattacatttttggtccttggattttgaccaactcacgaaattggtccta 5184482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 291 - 354
Target Start/End: Original strand, 35160906 - 35160968
Alignment:
Q  291 ttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    ||||||||||||||||||||||  |||| ||| | |||| |||||||| |||||||||||||||    
T  35160906 ttttagtcctatctccctattttcaactccag-agcgcacagaaatgatagttttagtccaacc 35160968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 277
Target Start/End: Complemental strand, 18535419 - 18535338
Alignment:
Q  195 acacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactata 277  Q
    ||||||||||||||  |||||||||   |||| |||||||||| || || ||| ||||||||||||| ||||| |||||||||    
T  18535419 acacttttggtcctcgtattttgacatgctcaagaaaatggtc-tacctctttcaaatcgaacaaaaccgtccctaaactata 18535338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 349
Target Start/End: Complemental strand, 33881030 - 33880969
Alignment:
Q  287 gcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtc 349  Q
    |||||||||||| |||| ||||||||  |||| |||||||||| | |||||||||||||||||    
T  33881030 gcagttttagtcttatc-ccctattttcaactccagaaacgcacataaatgacagttttagtc 33880969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 38859191 - 38859133
Alignment:
Q  181 tttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    |||| |||||||||||||||||||||||  | ||||| || |||||||||| |||||||    
T  38859191 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 38859133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 276
Target Start/End: Complemental strand, 49064266 - 49064176
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 276  Q
    |||||||||| ||||||| ||||   |||||| |||  |||||||||||||| |  || ||| ||||||||||||||||||  ||||||||    
T  49064266 ggcttaattatacttttgatcctcacattttggccagttcacgaaaatggtcatgactctttcaaatcgaacaaaatcgtcaataaactat 49064176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 19590525 - 19590578
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    |||||||||||||||||||||||  | ||||| || |||||||||| |||||||    
T  19590525 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 19590578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 272
Target Start/End: Original strand, 33880609 - 33880706
Alignment:
Q  176 aatattttttggc-ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaa 272  Q
    |||||||||| || |||||| || ||||||||||  ||||||||||| ||||| ||||| || ||  || ||| ||||||||||||| ||||| ||||    
T  33880609 aatattttttagccttaattgcatttttggtcctcgtattttgaccagctcacaaaaattgttctgcctctttcaaatcgaacaaaaccgtccctaaa 33880706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 34594585 - 34594630
Alignment:
Q  188 cttaattacacttttggtcctactattttgaccaactcacgaaaat 233  Q
    |||||||||||||||||||||   |||||||| |||||||||||||    
T  34594585 cttaattacacttttggtcctcgcattttgactaactcacgaaaat 34594630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 266
Target Start/End: Original strand, 35578902 - 35578979
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtc 266  Q
    |||||||||||||||||| |   |||||||||| ||||| |||||||||||  |  ||| ||||||||||||| ||||    
T  35578902 ttaattacacttttggtcattgcattttgaccagctcacaaaaatggtcctgccactttcaaatcgaacaaaaccgtc 35578979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 268
Target Start/End: Original strand, 9393738 - 9393818
Alignment:
Q  188 cttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtcct 268  Q
    |||||||||||||||| ||||   ||||||| || ||||||||||| ||| |  || ||| ||||||||||||| ||||||    
T  9393738 cttaattacacttttgatcctcgcattttgatcagctcacgaaaattgtcttgcctctttcaaatcgaacaaaaccgtcct 9393818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 124; Significance: 1e-63; HSPs: 66)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 186 - 354
Target Start/End: Original strand, 11539637 - 11539805
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||          
T  11539637 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctattttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 11539736  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     ||||||||||||||||||||||||||| |||| |||||||||| | ||||||||||||||||||||||    
T  11539737 tgcagttttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttagtccaacc 11539805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 186 - 354
Target Start/End: Complemental strand, 33921158 - 33920990
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||          
T  33921158 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtctttaaactaaatgtttttt 33921059  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     ||||||||||||||||||||||||||| ||||  ||||||||| ||||||||||||||||||||||||    
T  33921058 tgcagttttagtcctatctccctatttccaactctagaaacgcacagaaatgacagttttagtccaacc 33920990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 186 - 354
Target Start/End: Original strand, 20127736 - 20127904
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  20127736 ggcttaattacacttttggtcctaccattttgaccaattcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 20127835  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     ||||||||||||||||||||||||||| |||  |||||||||| | |||||||| |||||||||||||    
T  20127836 tgcagttttagtcctatctccctatttccaaccccagaaacgcacaaaaatgacaattttagtccaacc 20127904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 186 - 354
Target Start/End: Complemental strand, 43160557 - 43160389
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    |||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||          
T  43160557 ggcttaattacactttaggtcctaccattttgacaaactcacgaaaatggtcctatcttttttaaatcgaactaaatcgtccttaaactatatgtttttt 43160458  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     ||||||||||||||||||||||||||| |||| |||||||||| |||||||||||||||| |||||||    
T  43160457 tgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttaatccaacc 43160389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 186 - 354
Target Start/End: Complemental strand, 38008497 - 38008330
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  38008497 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttt 38008399  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     ||||||||||||||||||||||||||| |||| || ||||||| | |||||| |||||||||||||||    
T  38008398 tgcagttttagtcctatctccctatttccaactccataaacgcacataaatgatagttttagtccaacc 38008330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 186 - 354
Target Start/End: Original strand, 6949451 - 6949619
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    |||||||||||| |||||||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||          
T  6949451 ggcttaattacatttttggtcctatcattttgactaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtcctttaactatatgtttttt 6949550  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     ||||||||||||||||||||||||||| |||| || ||||||| ||||||||||||||||||||||||    
T  6949551 tgcagttttagtcctatctccctatttccaactccataaacgcacagaaatgacagttttagtccaacc 6949619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 181 - 354
Target Start/End: Original strand, 42192235 - 42192407
Alignment:
Q  181 tttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgn 280  Q
    ||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||     
T  42192235 tttttggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg- 42192333  T
Q  281 nnnnnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
          |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||    
T  42192334 ttttttgcagttttagtcctatctccctatttctaactccagaaacgcacataaatgacagttttagtccaacc 42192407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 180 - 354
Target Start/End: Original strand, 62951 - 63124
Alignment:
Q  180 ttttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 279  Q
    ||||| ||||||||||||||| ||||||| | ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  62951 tttttaggcttaattacacttatggtccttccattttgaccaactcacgaaaatggtcctacctttttaaaatcgaacaaaatcgtccttaaactatatg 63050  T
Q  280 nnnnnnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
           ||||||||||||||||||||||||||| ||||  ||||||||| | ||||||||||||||||||||||    
T  63051 -ttttttgcagttttagtcctatctccctatttccaactcaagaaacgcacataaatgacagttttagtccaacc 63124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 186 - 354
Target Start/End: Complemental strand, 4356302 - 4356135
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    ||||||||||||||||||||||||  |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||          
T  4356302 ggcttaattacacttttggtcctatcattttgaccaactcacgataatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttt 4356204  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     ||||||||| | |||| |||||||||| |||| |||||||||| ||||||||||||||||||||||||    
T  4356203 tgcagttttaattctatttccctatttccaactccagaaacgcacagaaatgacagttttagtccaacc 4356135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 186 - 354
Target Start/End: Complemental strand, 4809425 - 4809258
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||          
T  4809425 ggcttaattacacttttggtcctaccattttgactaactcacgaaaatggtcctatgttttttaaattgaacaaagtcgtccttaaactatatg-ttttt 4809327  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     ||||||||||||||||||||||||||| ||||||| ||| ||| | ||||||||||||||||||||||    
T  4809326 tgcagttttagtcctatctccctatttccaactacaaaaaagcacaaaaatgacagttttagtccaacc 4809258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 186 - 353
Target Start/End: Original strand, 16952935 - 16953103
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-nnnnn 284  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||          
T  16952935 ggcttaattatacttttggtcctaccattttgaccaactcacgaaaattgtcttatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 16953034  T
Q  285 nngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaac 353  Q
      || ||||||||| |||||||||||||| ||||  ||||||||| |||||||||||||||||||||||    
T  16953035 ttgcggttttagtcatatctccctatttccaactctagaaacgcacagaaatgacagttttagtccaac 16953103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 186 - 353
Target Start/End: Original strand, 17060906 - 17061074
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-nnnnn 284  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||          
T  17060906 ggcttaattatacttttggtcctaccattttgaccaactcacgaaaattgtcttatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 17061005  T
Q  285 nngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaac 353  Q
      || ||||||||| |||||||||||||| ||||  ||||||||| |||||||||||||||||||||||    
T  17061006 ttgcggttttagtcatatctccctatttccaactctagaaacgcacagaaatgacagttttagtccaac 17061074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 186 - 354
Target Start/End: Complemental strand, 42192789 - 42192621
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    |||||||||||||||||||||||   ||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||| |||          
T  42192789 ggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaactagatgtttttt 42192690  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     |||||||||||| |||| ||||||||| |||| |||||||||| ||||||||||||||||||||||||    
T  42192689 tgcagttttagtcatatccccctatttccaactccagaaacgcacagaaatgacagttttagtccaacc 42192621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 180 - 354
Target Start/End: Original strand, 38007944 - 38008118
Alignment:
Q  180 ttttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 279  Q
    ||||| |||||||||||||||||||||||   |||||||||||||||||||| |||||||| || ||||||||||||||||||||||| |||||||||||    
T  38007944 tttttaggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg 38008043  T
Q  280 nnnnnnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
           |||||||||||| |||||||||||||| |||| || ||||||| |||||||||||||||| |||||||    
T  38008044 tttttttgcagttttagtcatatctccctatttccaactccaaaaacgcacagaaatgacagttttaatccaacc 38008118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 189 - 354
Target Start/End: Original strand, 13315496 - 13315664
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg--nnnnnnn 286  Q
    |||||||||||||| ||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||             
T  13315496 ttaattacactttttgtcctaccattttgaccaactcatgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttttt 13315595  T
Q  287 gcagttttagtcctatctccctatttctaactacag-aaacgcatagaaatgacagttttagtccaacc 354  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||| ||||||||||||||||||||||||    
T  13315596 gcagttttagtcctatctccctatttccaactccagaaaatgcacagaaatgacagttttagtccaacc 13315664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 190 - 354
Target Start/End: Complemental strand, 16175892 - 16175728
Alignment:
Q  190 taattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnngca 289  Q
    |||||||||||||||||||   ||||| |||||||||||||| ||||| || || |||||||||||||||||||||||||||||||||||       |||    
T  16175892 taattacacttttggtccttacatttttaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccttaaactatatgtttttttgca 16175793  T
Q  290 gttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    |||||||||||||||||||||||| |||| |||||||||| | ||||||||||||||||||||||    
T  16175792 gttttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttagtccaacc 16175728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 189 - 354
Target Start/End: Complemental strand, 15551218 - 15551053
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnngc 288  Q
    |||||||||||||||| ||||| |||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||  ||||||       ||    
T  15551218 ttaattacacttttggccctaccattttgaccaactcacaaaaatggtcatatattttttaaatcgaacaaaatcgtccttaagttatatgtttttttgc 15551119  T
Q  289 agttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    ||||||||||||||||||||||||| |||| |||||||||| | |||| | |||||||||||||||    
T  15551118 agttttagtcctatctccctatttccaactccagaaacgcacataaataatagttttagtccaacc 15551053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 180 - 354
Target Start/End: Complemental strand, 20128289 - 20128116
Alignment:
Q  180 ttttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 279  Q
    ||||| |||||||||||||||||||||||   ||||| |||||||||||||| |||||||| || ||||||||| |||||||||||||||||||||||||    
T  20128289 tttttaggcttaattacacttttggtccttgcatttttaccaactcacgaaattggtcctacctcttttaaatcaaacaaaatcgtccttaaactatatg 20128190  T
Q  280 nnnnnnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
           ||| ||||||||||||||||||||||| |||| |||||||||| | ||||||||||||||||||||||    
T  20128189 -ttttttgcaattttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaacc 20128116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 186 - 352
Target Start/End: Original strand, 44219644 - 44219809
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    ||||||||||||||||||||||| | ||||||| |||||||| |||||| ||||| ||||||||||||||||||||| ||||||||| ||||||          
T  44219644 ggcttaattacacttttggtccttccattttgatcaactcacaaaaatgatcctaccttttttaaatcgaacaaaattgtccttaaattatatg-ttttt 44219742  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaa 352  Q
     |||||||||||||||||||||| |||| |||| |||||||||| ||||||||||||||||||||||    
T  44219743 tgcagttttagtcctatctccctgtttccaactccagaaacgcacagaaatgacagttttagtccaa 44219809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 186 - 354
Target Start/End: Complemental strand, 11540184 - 11540017
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    |||||||||| |||||||||| |   ||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||          
T  11540184 ggcttaattatacttttggtcatcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg-ttttt 11540086  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     |||||||||||| ||| |||||||||| |||| |||||||||| ||||||||||||||||||||||||    
T  11540085 tgcagttttagtcatatatccctatttccaactccagaaacgcacagaaatgacagttttagtccaacc 11540017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 184 - 354
Target Start/End: Original strand, 4355753 - 4355922
Alignment:
Q  184 ttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnn 283  Q
    |||||||||||||||||||||||||   ||||||||| |||||||||| ||||| || || ||||||||||||||||||||||| |||||||||||        
T  4355753 ttggcttaattacacttttggtccttgcattttgacctactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatg-ttt 4355851  T
Q  284 nnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
       ||||||||||||||||||||||||||  |||| |||||||||| | ||||||||||||||||||||||    
T  4355852 tttgcagttttagtcctatctccctattttcaactccagaaacgcacataaatgacagttttagtccaacc 4355922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 189 - 354
Target Start/End: Complemental strand, 9330338 - 9330173
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnngc 288  Q
    ||||||||||||||||||||   |||||||||||||||||||| | ||| || || |||||||||||||||||||||||  ||||||||||       ||    
T  9330338 ttaattacacttttggtccttgcattttgaccaactcacgaaatttgtcatacctcttttaaatcgaacaaaatcgtccccaaactatatgtttttttgc 9330239  T
Q  289 agttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    |||||||||||||||| |||||||  ||||| |||||| |||||||||||||||||||||||||||    
T  9330238 agttttagtcctatctacctattttcaactatagaaacacatagaaatgacagttttagtccaacc 9330173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 189 - 354
Target Start/End: Original strand, 15550676 - 15550841
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnngc 288  Q
    ||||||||||||||| ||||   ||| |||||||||||||||| |||||||| || ||||||||||||||||||||||| |||||||||||       ||    
T  15550676 ttaattacacttttgatccttgcattctgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttgc 15550775  T
Q  289 agttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    |||||||||||||| |||||||||  |||| |||||||||| |||||||||||||||||| |||||    
T  15550776 agttttagtcctatttccctattttcaactccagaaacgcacagaaatgacagttttagttcaacc 15550841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 189 - 351
Target Start/End: Original strand, 33920615 - 33920776
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnngc 288  Q
    ||||||||| ||||||||||   |||||||||||||||||||| || || || || ||||||||||||||||||||||| |||||||||||       ||    
T  33920615 ttaattacatttttggtccttgcattttgaccaactcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactatatgattttt-gc 33920713  T
Q  289 agttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtcca 351  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  33920714 agttttagtcctatctccctattttcaactccagaaacgcatagaaatgacagttttagtcca 33920776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 186 - 354
Target Start/End: Complemental strand, 13399965 - 13399799
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    ||||||||| || |||| ||||||| ||||||||||||||||||||||||| |||| | |||||||||||||||||| |||||||||||||||           
T  13399965 ggcttaattgcaattttagtcctaccattttgaccaactcacgaaaatggt-ctatttcttttaaatcgaacaaaattgtccttaaactatat-attttt 13399868  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     |||||||||||| |||||||||||||| |||| || |||||||||||||||||||||||| |||||||    
T  13399867 tgcagttttagtcatatctccctatttccaactccataaacgcatagaaatgacagttttaatccaacc 13399799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 187 - 354
Target Start/End: Complemental strand, 16953479 - 16953313
Alignment:
Q  187 gcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnn 286  Q
    ||||||||||||||||||||||   ||||||||||||||| |||| |||||||| || |||||||||||||||||  |||| |||| ||||||           
T  16953479 gcttaattacacttttggtccttgcattttgaccaactcatgaaattggtcctacctcttttaaatcgaacaaaaatgtccctaaagtatatgtttttt- 16953381  T
Q  287 gcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    ||||||||||||||||||||||||||| |||| || ||||||| ||||||||||||||||||||||||    
T  16953380 gcagttttagtcctatctccctatttccaactccaaaaacgcacagaaatgacagttttagtccaacc 16953313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 186 - 278
Target Start/End: Original strand, 5560051 - 5560143
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatat 278  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  5560051 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaaattgaacaaaatcgtccttaaactatat 5560143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 186 - 354
Target Start/End: Complemental strand, 43216255 - 43216088
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    ||||||||||||||||| |||||    ||||||||||||||||||| |||||||| || ||||||||||||||||||||||| ||||||||||           
T  43216255 ggcttaattacacttttagtccttgcgttttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatat-attttt 43216157  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     ||||||||||||||||||| ||||||| |||| |||||| ||| |||||||||| |||||||||||||    
T  43216156 tgcagttttagtcctatctctctatttccaactccagaaatgcacagaaatgacaattttagtccaacc 43216088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 186 - 348
Target Start/End: Complemental strand, 24140220 - 24140064
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    |||||||||||||||||| ||||   || |||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||           
T  24140220 ggcttaattacacttttgttcctcgcatcttgaccaactcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtccataaactatat------t 24140127  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagt 348  Q
     ||||||||||| |||| |||||||||| |||| |||||||||| |||||||||| |||||||    
T  24140126 tgcagttttagttctatatccctatttccaactccagaaacgcacagaaatgacatttttagt 24140064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 212 - 354
Target Start/End: Original strand, 4808905 - 4809046
Alignment:
Q  212 attttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnngcagttttagtcctatctccctatt 311  Q
    |||||||||||||||||||| || ||||| || ||||||||||||||||||||||| |||||||||||       | |||||||||||||||| ||||||    
T  4808905 attttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcgtccataaactatatgtttttt-gtagttttagtcctatcttcctatt 4809003  T
Q  312 tctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    || |||| |||||||||| ||||||||||||||||||||||||    
T  4809004 tccaactccagaaacgcacagaaatgacagttttagtccaacc 4809046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 189 - 354
Target Start/End: Complemental strand, 63507 - 63337
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-----nnnn 283  Q
    ||||||| | ||||||||||  ||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||| |||||||||||             
T  63507 ttaattatatttttggtccttgtattttgaccaactcacgaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactatatgttttttttt 63408  T
Q  284 nnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
       |||||||||||||||||| |||||||| ||||  ||||||||| | ||||||||||||||||||||||    
T  63407 tttgcagttttagtcctatcttcctatttccaactctagaaacgcacataaatgacagttttagtccaacc 63337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 186 - 354
Target Start/End: Original strand, 32418159 - 32418324
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    ||||||||||||||| |||||||   |||||||||||||||||||| |||||||| || |||  |||||||||||||||||| ||||||||||           
T  32418159 ggcttaattacacttatggtccttgcattttgaccaactcacgaaattggtcctacctcttt--aatcgaacaaaatcgtccctaaactatat-attttt 32418255  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     |||||||||||| ||||||| |||||| |||| |||||||||| |||||||||| |||||||||||||    
T  32418256 tgcagttttagtcatatctccttatttccaactccagaaacgcacagaaatgacatttttagtccaacc 32418324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 189 - 354
Target Start/End: Original strand, 43160012 - 43160177
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnngc 288  Q
    ||||||||| ||||||||||   ||||||| |||||||||||| ||||| || || ||||||||||||||||||||||| |||||||||         ||    
T  43160012 ttaattacatttttggtccttgcattttgatcaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatacatttttttgc 43160111  T
Q  289 agttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    ||||||||||||||||||||||||  |||| |||||||||| | ||||||||||||||||| ||||    
T  43160112 agttttagtcctatctccctattttcaactccagaaacgcacataaatgacagttttagtctaacc 43160177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 186 - 351
Target Start/End: Original strand, 649527 - 649690
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    |||||||||||||||||||||||   || |||||||||| |||||| |||||||| || ||||||||||||||||||||||| |||||||||||          
T  649527 ggcttaattacacttttggtccttgcatcttgaccaacttacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg-ttttt 649625  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtcca 351  Q
     ||||||||||| || |||||||||||| |||| |||||||||| | ||||||| |||||||||||    
T  649626 tgcagttttagttctgtctccctatttccaactccagaaacgcacataaatgac-gttttagtcca 649690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 188 - 268
Target Start/End: Complemental strand, 649881 - 649801
Alignment:
Q  188 cttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtcct 268  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  649881 cttaattacacttttggtcctatcattttgaccaactcacgaaaatggtcctattttttttaaatcgaacaaaatcgtcct 649801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 218 - 354
Target Start/End: Original strand, 13399454 - 13399589
Alignment:
Q  218 accaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnngcagttttagtcctatctccctatttctaac 317  Q
    ||||| |||||||| ||||| || || |||||||| |||||||||||||| |||||||||||       ||||||||||||||||||||||||||| |||    
T  13399454 accaattcacgaaattggtcatacctcttttaaatggaacaaaatcgtccctaaactatatgtttttt-gcagttttagtcctatctccctatttccaac 13399552  T
Q  318 tacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    | |||||||||| ||||||||||||||||||| ||||    
T  13399553 tccagaaacgcacagaaatgacagttttagtctaacc 13399589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 186 - 354
Target Start/End: Complemental strand, 44220191 - 44220022
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    ||||||||||||||||| |||||   |||||||||||||||||||||||||| || |||||||||||| ||||||||||||| |||||||||||          
T  44220191 ggcttaattacactttttgtcctcgcattttgaccaactcacgaaaatggtcataccttttttaaatcaaacaaaatcgtccctaaactatatg-ttttt 44220093  T
Q  286 ngcagttttagtcctatct--ccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     | |||||||||| |||||  ||||||||| |||| |||||||| | | |||||| | |||||||||||||    
T  44220092 tgtagttttagtcatatctccccctatttccaactccagaaacgtacaaaaatgataattttagtccaacc 44220022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 182 - 325
Target Start/End: Complemental strand, 6949994 - 6949850
Alignment:
Q  182 ttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactata-tgn 280  Q
    |||||||||||||||||||||||||||   |||||||||||||||||||| ||||||||  | |||||||| |||||||||||||| ||||||||| |      
T  6949994 ttttggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacatcttttaaatagaacaaaatcgtccctaaactatatttt 6949895  T
Q  281 nnnnnngcagttttagtcctatctccctatttctaactacagaaa 325  Q
          |||||||||||||||||||| |||||| |||| ||||||    
T  6949894 ttttttgcagttttagtcctatctccatatttcaaactccagaaa 6949850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 178 - 329
Target Start/End: Complemental strand, 32418700 - 32418550
Alignment:
Q  178 tattttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactata 277  Q
    ||||||| |||||||||| |||||||||||||  ||||||||||| |||||||| || | ||| || |||||||||||||||||||||||||||||||||    
T  32418700 tatttttaggcttaattatacttttggtcctatcattttgaccaattcacgaaattgattctacctcttttaaatcgaacaaaatcgtccttaaactata 32418601  T
Q  278 tgnnnnnnngcagttttagtcctatctccctatttctaactacagaaacgca 329  Q
    |        ||||||||| || |||||||||||||| ||||  |||||||||    
T  32418600 t-attttttgcagttttaatcttatctccctatttccaactctagaaacgca 32418550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 186 - 345
Target Start/End: Complemental strand, 31797323 - 31797166
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    |||||||||||||||||||||||   |||||||||| ||||||||||||||| |  || ||| ||||||||||||| ||||| |||||||||||          
T  31797323 ggcttaattacacttttggtcctcacattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtccctaaactatatg-ttttt 31797225  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagtttt 345  Q
     ||||||||||||||| || |||||||  ||||  ||||||||| |||||||||||||||    
T  31797224 tgcagttttagtcctacct-cctattttcaactctagaaacgcagagaaatgacagtttt 31797166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 186 - 278
Target Start/End: Complemental strand, 25336146 - 25336054
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatat 278  Q
    |||||||||||||||||||||||   |||||||||||||||||||| ||||||||  | ||||||||||||||||||||||| |||| |||||    
T  25336146 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacttcttttaaatcgaacaaaatcgtccctaaattatat 25336054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 186 - 347
Target Start/End: Complemental strand, 28143575 - 28143416
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgnnnnn 284  Q
    ||||||||| |||||||||||||   |||||||||| |||||||||||||||||  || ||| ||||||||||||||||||| |||||||| |||         
T  28143575 ggcttaatttcacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcaaatcgaacaaaatcgtccctaaactatcatg--ttt 28143478  T
Q  285 nngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttag 347  Q
      ||||||||||||||| |  |||||||  |||| |||||||||| |||||||||||||||||    
T  28143477 ttgcagttttagtccta-cgtcctattttcaactccagaaacgcagagaaatgacagttttag 28143416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 287 - 354
Target Start/End: Complemental strand, 5560996 - 5560929
Alignment:
Q  287 gcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    ||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||    
T  5560996 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaacc 5560929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 9329915 - 9329974
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatctttttt 248  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  9329915 ttaattacacttttggtcctacaattttgaccaactcacaaaaatggtcctatctttttt 9329974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 287 - 354
Target Start/End: Original strand, 43215809 - 43215876
Alignment:
Q  287 gcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    |||||||||||| |||||||||||||  |||| || ||||| ||||||||||||||||||||||||||    
T  43215809 gcagttttagtcatatctccctattttcaactccaaaaacgaatagaaatgacagttttagtccaacc 43215876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 272
Target Start/End: Complemental strand, 14942392 - 14942306
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaa 272  Q
    ||||||||||||||||||||| |   |||||||||| ||||||||||||||| | ||| ||| |||||||||||||| |||| ||||    
T  14942392 ggcttaattacacttttggtcttcgcattttgaccagctcacgaaaatggtcttgtctctttcaaatcgaacaaaattgtccataaa 14942306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 276
Target Start/End: Original strand, 20495196 - 20495283
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 276  Q
    |||||| |||||||||| ||   ||||||||||||||||||||||| || |  || ||||||||| ||||||||||||| ||||||||    
T  20495196 ttaatttcacttttggttctcgcattttgaccaactcacgaaaatgatcatgcctcttttaaatctaacaaaatcgtccctaaactat 20495283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 226 - 276
Target Start/End: Original strand, 5035903 - 5035953
Alignment:
Q  226 acgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 276  Q
    |||||||||||||| ||||||||||||||||||||| ||||| ||||||||    
T  5035903 acgaaaatggtcctgtcttttttaaatcgaacaaaaccgtccctaaactat 5035953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 269
Target Start/End: Original strand, 35779706 - 35779791
Alignment:
Q  184 ttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtcctt 269  Q
    |||||||||||||||||||||||||  | |||||||  ||||||||||||||||||  | |||| |||  ||||||||| ||||||    
T  35779706 ttggcttaattacacttttggtcctcgtgttttgacatactcacgaaaatggtcctgccattttaaaacagaacaaaattgtcctt 35779791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 196 - 272
Target Start/End: Complemental strand, 2190612 - 2190536
Alignment:
Q  196 cacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaa 272  Q
    ||||||||||| |   |||||||||| ||||||||| |||||||  |||||| ||||||||||||||||||| ||||    
T  2190612 cacttttggtcatcgcattttgaccagctcacgaaattggtcctgcctttttcaaatcgaacaaaatcgtccctaaa 2190536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 349
Target Start/End: Original strand, 9329985 - 9330043
Alignment:
Q  291 ttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtc 349  Q
    |||||||||||||||| |||||| ||||  ||||||||| |||||||||||||| ||||    
T  9329985 ttttagtcctatctccttatttccaactctagaaacgcacagaaatgacagtttcagtc 9330043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 20440581 - 20440523
Alignment:
Q  181 tttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    |||| |||||||||||||||||||||||  | ||||| ||||||||||||| |||||||    
T  20440581 ttttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcct 20440523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 354
Target Start/End: Original strand, 22445741 - 22445807
Alignment:
Q  288 cagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    |||||||||| ||||||||||||||  |||| ||||||| || | ||||||||||||||||| ||||    
T  22445741 cagttttagtactatctccctattttcaacttcagaaacacacataaatgacagttttagtcaaacc 22445807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 20444749 - 20444802
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    |||||||||||||||||||||||  | ||||| ||||||||||||| |||||||    
T  20444749 ggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcct 20444802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 28616608 - 28616664
Alignment:
Q  181 tttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtc 237  Q
    ||||||||||||||||||||||||||||  | ||||| || |||||||||| |||||    
T  28616608 tttttggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 28616664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 189 - 247
Target Start/End: Original strand, 9329833 - 9329892
Alignment:
Q  189 ttaattacacttttggtcctactattttga-ccaactcacgaaaatggtcctatcttttt 247  Q
    |||||||||||||||||||||  ||||||| | ||||||||||||||||  |||||||||    
T  9329833 ttaattacacttttggtcctatcattttgatctaactcacgaaaatggttatatcttttt 9329892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 28617159 - 28617076
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtcctt 269  Q
    |||||||||||||||||||||||  | ||||| || |||||||||| |||| || || |||| |||  ||||||||| ||||||    
T  28617159 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgtccttttaaaacagaacaaaatggtcctt 28617076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 26538629 - 26538571
Alignment:
Q  181 tttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    |||| |||||||||||||||||||||||  | ||||| || |||||||||| |||||||    
T  26538629 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 26538571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 1978654 - 1978601
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    |||||||||||||||||||||||  | ||||| || |||||||||| |||||||    
T  1978654 ggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcct 1978601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 269
Target Start/End: Complemental strand, 18451382 - 18451293
Alignment:
Q  180 ttttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtcctt 269  Q
    ||||| |||||||||||||||||||||||  | ||||| || ||| |||||| |||||||  | |||| |||  ||||||||| ||||||    
T  18451382 tttttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaatagtcctt 18451293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 261
Target Start/End: Complemental strand, 3824251 - 3824179
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaa 261  Q
    ||||||| |||||||||| |   ||||| |||||||||||||| ||||| |  | ||||||||||||||||||    
T  3824251 ttaattatacttttggtcatcgcattttaaccaactcacgaaattggtcatgccctttttaaatcgaacaaaa 3824179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 261
Target Start/End: Original strand, 8425358 - 8425430
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaa 261  Q
    ||||||||||||||||||||  | ||||| || |||||||||| ||||| || |||||| |||  ||||||||    
T  8425358 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtcttacctttttaaaacagaacaaaa 8425430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 18450830 - 18450882
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcc 238  Q
    |||||||||||||||||||||||  | ||||| || |||||||||| ||||||    
T  18450830 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcc 18450882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 18450935 - 18450991
Alignment:
Q  291 ttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttag 347  Q
    ||||||||||| ||||   |||| |||| |||||||||| |||||||||||||||||    
T  18450935 ttttagtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 18450991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 272
Target Start/End: Original strand, 22445633 - 22445724
Alignment:
Q  180 ttttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaa 272  Q
    ||||| || |||||||||||||||||| | | ||||||| ||||| |  ||| ||||| || | || ||||||||||||||| ||||||||||    
T  22445633 tttttaggtttaattacacttttggtcttgc-attttgatcaacttataaaattggtcataccattattaaatcgaacaaaaccgtccttaaa 22445724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 261
Target Start/End: Original strand, 43058332 - 43058408
Alignment:
Q  185 tggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaa 261  Q
    ||||||||||||||||||| ||||  | ||||| ||||||||| ||| |||||||  |||||| |||  ||||||||    
T  43058332 tggcttaattacacttttgatcctcgtgttttggccaactcactaaactggtcctgcctttttaaaacagaacaaaa 43058408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 123; Significance: 4e-63; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 183 - 354
Target Start/End: Original strand, 18049587 - 18049758
Alignment:
Q  183 tttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnn 282  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||       
T  18049587 tttggctcaattacacttttggtcctaccattttgaccaactcacgaaaatggttctatcttttttaaatcgaacaaaatcgtccttaaactatatgttt 18049686  T
Q  283 nnnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
        ||||||||||||||||||||||||||| |||| |||||||||| |||||||||||||||| |||||||    
T  18049687 ttttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttaatccaacc 18049758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 189 - 354
Target Start/End: Complemental strand, 18428305 - 18428140
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnngc 288  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||    
T  18428305 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttgc 18428206  T
Q  289 agttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    ||||||| ||||||||||||||||| |||| |||||||||| | ||||||||||||||||||||||    
T  18428205 agttttactcctatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaacc 18428140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 188 - 354
Target Start/End: Original strand, 28254427 - 28254593
Alignment:
Q  188 cttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnng 287  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||       |    
T  28254427 cttaattacacttttggtcctaccattttgatcaactcacgaaaatggtcctatctattttaaattgaacaaaatcgtccttaaactatatgtttttttg 28254526  T
Q  288 cagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||    
T  28254527 cagttttagtcctatctccctatttccaactccagaaacgcatagaaatgacatttttagtccaacc 28254593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 179 - 354
Target Start/End: Complemental strand, 15256384 - 15256207
Alignment:
Q  179 attttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatat 278  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15256384 atttttaggcttaattacacttttggtcctaccattttgaccaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatat 15256285  T
Q  279 g--nnnnnnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    |         |||||| ||||| |||||||||||||| |||| |||||||||| |||||||||| |||||||||||||    
T  15256284 gtttttttttgcagttctagtcatatctccctatttccaactccagaaacgcacagaaatgacaattttagtccaacc 15256207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 186 - 354
Target Start/End: Complemental strand, 600044 - 599877
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||||||||          
T  600044 ggcttaattacacttttggtcctaccattttgaccaactaacgaaaatggtcatatcttttttaaatggaacaaaatcgtccttaaactatatg-ttttt 599946  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     |||||||||||| |||||| ||||||| || | |||||||||||||||||||||||||||||||||||    
T  599945 tgcagttttagtcttatctctctatttccaattccagaaacgcatagaaatgacagttttagtccaacc 599877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 181 - 354
Target Start/End: Original strand, 34799074 - 34799247
Alignment:
Q  181 tttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgn 280  Q
    |||| ||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||     
T  34799074 ttttaggcttaattacacttttggtcataccattttgaccaactcatgaaaatggtcctattttttttaaatcgaacaaagtcgtccttaaactatatgt 34799173  T
Q  281 nnnnnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
          ||||||||||||||||||||||||||| |||| || ||||||| | |||||||| |||||||||||||    
T  34799174 ttttttgcagttttagtcctatctccctatttccaactccataaacgcacataaatgacaattttagtccaacc 34799247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 186 - 349
Target Start/End: Original strand, 5730817 - 5730979
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||          
T  5730817 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatagtcctatcttttttaaatcaaacaaaatcgtccttaaactatatg-ttttt 5730915  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtc 349  Q
     || |||||||||||| |||||||||| ||||| |||||||| | |||||||||||||||||||    
T  5730916 tgctgttttagtcctacctccctatttttaactccagaaacgtacagaaatgacagttttagtc 5730979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 184 - 354
Target Start/End: Complemental strand, 9797275 - 9797105
Alignment:
Q  184 ttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnn 283  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||        
T  9797275 ttggattaattacacttttggtcctaccattttgaccaactcacgaaaatggttctatcttttttaaatcaaataaaatcgtccttaaactatatgtttt 9797176  T
Q  284 nnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
       ||||||||||| |||||| |||||||| |||| || ||||||| ||||||||||||||||||| ||||    
T  9797175 tttgcagttttagttctatctacctatttccaactccataaacgcacagaaatgacagttttagtctaacc 9797105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 187 - 354
Target Start/End: Complemental strand, 28254971 - 28254805
Alignment:
Q  187 gcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnn 286  Q
    ||||||||||||||||||||||   |||||||||||||||||||| |||||||| || ||||||||||||||||||||||| ||||||||||            
T  28254971 gcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatat-aattttt 28254873  T
Q  287 gcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    ||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||    
T  28254872 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaacc 28254805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 186 - 354
Target Start/End: Complemental strand, 16578642 - 16578475
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||  ||||||||| ||||||||||||||| || ||||||||||||          
T  16578642 ggcttaattacacttttggtcctaccattttgacgaactcacgaaaatggttatatctttttcaaatcgaacaaaatcatcattaaactatatg-ttttt 16578544  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     ||||||||||||||||||||||||||| |||   ||||||||| ||||||||||||||||||||||||    
T  16578543 tgcagttttagtcctatctccctatttccaacactagaaacgcacagaaatgacagttttagtccaacc 16578475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 186 - 318
Target Start/End: Original strand, 41260271 - 41260402
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  41260271 ggcttaattacacttttggtcctaccattttgaccaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttt 41260369  T
Q  286 ngcagttttagtcctatctccctatttctaact 318  Q
     |||||||||||| |||||||||||||| ||||    
T  41260370 tgcagttttagtcttatctccctatttccaact 41260402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 187 - 354
Target Start/End: Original strand, 42035773 - 42035939
Alignment:
Q  187 gcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnn 286  Q
    ||||||||||||||||||||||   ||||||||||||||||||||||||| ||| || ||||||||||||||||||||||| ||||||||||            
T  42035773 gcttaattacacttttggtcctcacattttgaccaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccataaactatat-atatttt 42035871  T
Q  287 gcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    ||| |||||||||||||||||||||||||||| || ||||||| | ||||||||||||||||||||||    
T  42035872 gcaattttagtcctatctccctatttctaactccataaacgcacaaaaatgacagttttagtccaacc 42035939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 183 - 354
Target Start/End: Original strand, 9796723 - 9796893
Alignment:
Q  183 tttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnn 282  Q
    ||||||||||||||||||||||||||   |||||||||||||||| ||| |||||||| || ||||||||||||||||||| ||| |||||||||||       
T  9796723 tttggcttaattacacttttggtccttgcattttgaccaactcacaaaattggtcctacctcttttaaatcgaacaaaatcatccataaactatatg-tt 9796821  T
Q  283 nnnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
        |||||||||||| |||||||||||||| |||| || ||||||| ||||||||||||||||||||||||    
T  9796822 ttttgcagttttagtcatatctccctatttccaactccataaacgcacagaaatgacagttttagtccaacc 9796893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 188 - 354
Target Start/End: Original strand, 2208716 - 2208882
Alignment:
Q  188 cttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnng 287  Q
    |||||||||||||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||             
T  2208716 cttaattacacttttgatcctaccattttgaccaactcacgaaaattgtcctatcttttttaaatcgaacaaaatcgtccttaaactatatattttttta 2208815  T
Q  288 cagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    || |||||||| |||||||||||||  || | |||||||| | |||||| | |||||||||||||||    
T  2208816 caattttagtcatatctccctattttcaattccagaaacgtacagaaataatagttttagtccaacc 2208882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 180 - 354
Target Start/End: Complemental strand, 6115663 - 6115489
Alignment:
Q  180 ttttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 279  Q
    ||||| |||||||||| ||||||||||||  ||||||||||||||| ||||| |||||||| || ||||||||||||||||||||||| |||||||||||    
T  6115663 tttttaggcttaattatacttttggtccttgtattttgaccaactcgcgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg 6115564  T
Q  280 nnnnnnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
           | ||||||||| |||||||| |||||  ||||  ||||||||| ||||||||||||||||||||||||    
T  6115563 tttttttgtagttttagttctatctccttattttcaactcaagaaacgcacagaaatgacagttttagtccaacc 6115489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 186 - 354
Target Start/End: Complemental strand, 35427358 - 35427191
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    |||||||||||||||||||||||   ||||||||||||||||||||||||| ||| || ||||||| ||||||||||||||| |||| |||||           
T  35427358 ggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggttctacctcttttaaaccgaacaaaatcgtccctaaattatat-attttt 35427260  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     ||||||||||||| ||||||||||||| |||| || ||||||| ||||||||||||||||||||||||    
T  35427259 tgcagttttagtcccatctccctatttccaactccataaacgcacagaaatgacagttttagtccaacc 35427191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 186 - 351
Target Start/End: Original strand, 599532 - 599696
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    |||||||||||| ||||||||||   |||||||||||||||||||| ||||| || || ||||||||||||||||||| ||| |||| ||||||          
T  599532 ggcttaattacatttttggtccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcatccctaaattatatg-ttttt 599630  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtcca 351  Q
     |||||||||||| |||||||||||||| |||| |||||||||| | |||||||||||||||||||    
T  599631 tgcagttttagtcatatctccctatttccaactccagaaacgcacacaaatgacagttttagtcca 599696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 186 - 318
Target Start/End: Original strand, 15255853 - 15255984
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    |||||||||||||||||||||||   |||||||||||||||||||| |||||||| || ||||||||||||||||||||||| |||||||||||          
T  15255853 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg-ttttt 15255951  T
Q  286 ngcagttttagtcctatctccctatttctaact 318  Q
     ||||||||||||||||||||||||||| ||||    
T  15255952 tgcagttttagtcctatctccctatttccaact 15255984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 186 - 354
Target Start/End: Complemental strand, 41260807 - 41260640
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    |||||||||| |||||||||| |   ||||||| |||||||||||| || || || || ||||||||||||||||||||||| |||||||||||          
T  41260807 ggcttaattatacttttggtcattgcattttgatcaactcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt 41260708  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     ||||||||||||||||||||||||||  |||| |||||||||| | ||||||||||||||||||||||    
T  41260707 -gcagttttagtcctatctccctattttcaactccagaaacgcacataaatgacagttttagtccaacc 41260640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 184 - 354
Target Start/End: Complemental strand, 7911164 - 7910995
Alignment:
Q  184 ttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnn 283  Q
    |||||||||||||||||||  ||||   ||||||||||||||||||||||||| ||| || ||||||||||||||||||||||| ||||||||||         
T  7911164 ttggcttaattacacttttaatcctcgcattttgaccaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccctaaactatat-attt 7911066  T
Q  284 nnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
       |||||||||||| |||| | ||||||  |||| || ||||||| ||||||||||||||||||||||||    
T  7911065 tttgcagttttagtcatatccctctattttcaactccataaacgcacagaaatgacagttttagtccaacc 7910995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 189 - 354
Target Start/End: Complemental strand, 35694421 - 35694249
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactata-------tgnn 281  Q
    |||||||||||||||||||| | |||||||| ||||||| ||||||||||||  |||||||||||||||||||||||||||||||||||       |       
T  35694421 ttaattacacttttggtccttccattttgactaactcacaaaaatggtcctacattttttaaatcgaacaaaatcgtccttaaactatattttttttttt 35694322  T
Q  282 nnnnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
         || ||||||||| |||||||||||||| |||| |||||||||| | ||||||||||||||||||||||    
T  35694321 tttttgctgttttagtcttatctccctatttccaactccagaaacgcacataaatgacagttttagtccaacc 35694249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 178 - 354
Target Start/End: Original strand, 16578100 - 16578276
Alignment:
Q  178 tattttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactata 277  Q
    ||||||| |||||||||||| ||||||| ||   |||||||||||||||||||| |||||||| || ||||||||||||||||||||||| |||| ||||    
T  16578100 tatttttaggcttaattacatttttggttcttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaattata 16578199  T
Q  278 tgnnnnnnngcagttttagtcctatctccctatttctaactacagaaacgc-atagaaatgacagttttagtccaacc 354  Q
    ||       |||||||| |||||||||||||||||| |||| ||||||||| | | |||  |||||||||||||||||    
T  16578200 tg-ttttttgcagttttggtcctatctccctatttccaactccagaaacgcaaaaaaaaaaacagttttagtccaacc 16578276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 189 - 354
Target Start/End: Complemental strand, 18050134 - 18049970
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnngc 288  Q
    ||||||||| ||||||||||   |||||||||||||||||||| ||||| || || ||||||||||||||||||||||| |||||||||||       ||    
T  18050134 ttaattacatttttggtccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatg-ttttttgc 18050036  T
Q  289 agttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     |||||| ||||||||||||||||  |||| |||||||||| |||||| ||||||||| |||||||    
T  18050035 tgttttaatcctatctccctattttcaactccagaaacgcacagaaataacagttttactccaacc 18049970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 186 - 354
Target Start/End: Complemental strand, 34799629 - 34799462
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    |||||||||||||||||||||||   ||||||||||| | |||||| |||||||| || |||||||||||||||||| |||| |||||||||||          
T  34799629 ggcttaattacacttttggtcctttcattttgaccaattaacgaaattggtcctacctcttttaaatcgaacaaaattgtccctaaactatatg-ttttt 34799531  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     |||||||||||||||||| |||||||| |||| || ||||||| | |||||| ||||||||| |||||    
T  34799530 tgcagttttagtcctatcttcctatttccaactccataaacgcacataaatgatagttttagttcaacc 34799462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 212 - 354
Target Start/End: Complemental strand, 5731332 - 5731191
Alignment:
Q  212 attttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnngcagttttagtcctatctccctatt 311  Q
    ||||||||||||||| |||| |||| ||| ||||| |||||||||||||||||||| |||||||||||       ||||||||||| |||||||||||||    
T  5731332 attttgaccaactcaggaaattggttctaccttttataaatcgaacaaaatcgtccataaactatatgtttttt-gcagttttagttctatctccctatt 5731234  T
Q  312 tctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    |  |||| |||||||||| | ||||||||||||||||||||||    
T  5731233 ttcaactccagaaacgcacataaatgacagttttagtccaacc 5731191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 187 - 354
Target Start/End: Original strand, 35693869 - 35694037
Alignment:
Q  187 gcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnn 286  Q
    ||||||||||||||||| ||||   ||||||||||| | ||||||||| | ||| || |||||||||||| |||||||||| ||||||||||            
T  35693869 gcttaattacacttttgatccttgcattttgaccaatttacgaaaatgattctacctcttttaaatcgaataaaatcgtccataaactatatatattttt 35693968  T
Q  287 g-cagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
      |||||||||||||||||||||||||| |||| |||||||||| | ||||||||||||||||||||||    
T  35693969 ttcagttttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttagtccaacc 35694037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 215 - 354
Target Start/End: Original strand, 26252838 - 26252976
Alignment:
Q  215 ttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnngcagttttagtcctatctccctatttct 314  Q
    ||||| || |||||||| ||||   |||| ||||||||||||||||||||||| |||||||||||       |||||||||||||||||||||||||||     
T  26252838 ttgactaattcacgaaattggtaacatctcttttaaatcgaacaaaatcgtccctaaactatatgttttgt-gcagttttagtcctatctccctatttcc 26252936  T
Q  315 aactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    |||| |||||||||  ||||||||||| ||||||||||||    
T  26252937 aactccagaaacgctcagaaatgacagatttagtccaacc 26252976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 212 - 354
Target Start/End: Complemental strand, 42036292 - 42036150
Alignment:
Q  212 attttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnngcagttttagtcctatctccctatt 311  Q
    ||||||||||||| ||||||||| || || || ||||||||||||||||||||||| |||||||||||       |||||||||||| |||   | ||||    
T  42036292 attttgaccaacttacgaaaatgatcttacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttgcagttttagtcgtattctcatatt 42036193  T
Q  312 tctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    || |||| |||||| ||| | ||||||||||||||||||||||    
T  42036192 tccaactccagaaatgcacaaaaatgacagttttagtccaacc 42036150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 186 - 354
Target Start/End: Original strand, 7910616 - 7910784
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    |||||||||||| ||||||||||   ||||||| |||||||||||||||||  || || ||||||||||||||||||||||| |||| ||||||          
T  7910616 ggcttaattacatttttggtcctcacattttgatcaactcacgaaaatggttatacctcttttaaatcgaacaaaatcgtccctaaattatatg-ttttt 7910714  T
Q  286 ngcagttttagtcc--tatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     |||| ||||||||  ||||||  |||||||||||  ||||| ||| ||||||||||||||||||| ||||    
T  7910715 tgcag-tttagtcctatatctctttatttctaactcaagaaatgcacagaaatgacagttttagtcaaacc 7910784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 276
Target Start/End: Complemental strand, 9930202 - 9930112
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 276  Q
    |||||||||||||||||||||||  ||||||| || |||||||||| |||||||  | |||| |||| ||||||||| |||||| ||||||    
T  9930202 ggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaactat 9930112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 239
Target Start/End: Original strand, 35426845 - 35426895
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  35426845 ttaattacacttttagtcctaccattttgaccaactcacgaaaatggtcct 35426895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 186 - 279
Target Start/End: Original strand, 18674148 - 18674241
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 279  Q
    |||||||||||||| ||||||||   | ||||||||| |||||||| |||| ||  |  ||||||||||||||||||||||| |||||||||||    
T  18674148 ggcttaattacactcttggtccttgcactttgaccaattcacgaaattggttcttccacttttaaatcgaacaaaatcgtccctaaactatatg 18674241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 291 - 354
Target Start/End: Original strand, 35426917 - 35426980
Alignment:
Q  291 ttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    ||||| ||||||||||||||||| |||| || ||||||| ||||||||||||||||||| ||||    
T  35426917 ttttactcctatctccctatttccaactccataaacgcacagaaatgacagttttagtctaacc 35426980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 189 - 267
Target Start/End: Complemental strand, 28877432 - 28877354
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtcc 267  Q
    ||||||||||||||||||||   |||||||||||||||||||||||||  || || ||| |||| ||||||||| ||||    
T  28877432 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggttatacctctttcaaattgaacaaaattgtcc 28877354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 304 - 354
Target Start/End: Original strand, 35163815 - 35163865
Alignment:
Q  304 tccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    |||||||||| ||||  ||||||||| ||||||||||||||||||||||||    
T  35163815 tccctatttccaactcgagaaacgcacagaaatgacagttttagtccaacc 35163865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 261
Target Start/End: Original strand, 18805167 - 18805238
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaa 261  Q
    |||||||||||||||||||    |||||||| | |||||||||||||| || ||| |||||||||||||||||    
T  18805167 ttaattacacttttggtccctgcattttgacaagctcacgaaaatggttct-tctcttttaaatcgaacaaaa 18805238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 276
Target Start/End: Original strand, 28876910 - 28876993
Alignment:
Q  193 ttacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 276  Q
    ||||||||||||||||   ||||||| || |||||||||||  | ||  || ||| ||||||||||||||||||| ||||||||    
T  28876910 ttacacttttggtcctcgcattttgatcagctcacgaaaataattctgcctctttcaaatcgaacaaaatcgtccctaaactat 28876993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 186 - 237
Target Start/End: Original strand, 33742922 - 33742973
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtc 237  Q
    |||||||||||||||||||||||  | |||||||| |||||||||| |||||    
T  33742922 ggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtc 33742973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 34541099 - 34541040
Alignment:
Q  180 ttttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    ||||| |||||||||||||||||||||||  | ||||| || |||||||||| |||||||    
T  34541099 tttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 34541040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 231
Target Start/End: Complemental strand, 9178185 - 9178135
Alignment:
Q  181 tttttggcttaattacacttttggtcctactattttgaccaactcacgaaa 231  Q
    ||||||||||||||||||||||||||||  | ||||| || ||||||||||    
T  9178185 tttttggcttaattacacttttggtcctcgtgttttggcctactcacgaaa 9178135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 41681125 - 41681187
Alignment:
Q  177 atattttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    |||||| | |||||||||||||||||||||||  | ||||| || |||||||||| |||||||    
T  41681125 atatttataggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 41681187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 44831247 - 44831300
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    |||||||||||||||||||||||  | ||||| || |||||||||| |||||||    
T  44831247 ggcttaattacacttttggtcctcatgttttggcctactcacgaaattggtcct 44831300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 11656450 - 11656506
Alignment:
Q  181 tttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtc 237  Q
    |||| |||||||||||||||||||||||  | ||||| || |||||||||| |||||    
T  11656450 ttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 11656506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 11657002 - 11656950
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcc 238  Q
    |||||||||||||||||||||||  | ||||| || |||||||||| ||||||    
T  11657002 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcc 11656950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 31133220 - 31133272
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcc 238  Q
    |||||||||||||||||||||||  | ||||| || |||||||||| ||||||    
T  31133220 ggcttaattacacttttggtcctcgtgttttgccctactcacgaaactggtcc 31133272  T

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Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 261
Target Start/End: Complemental strand, 41681680 - 41681604
Alignment:
Q  185 tggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaa 261  Q
    ||||||||||||||||||||||||  | ||||| || | |||||||| |||||||| | |||| |||  ||||||||    
T  41681680 tggcttaattacacttttggtcctcgtgttttggcctaatcacgaaactggtcctacccttttaaaacagaacaaaa 41681604  T

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Target: chr5 (Bit Score: 123; Significance: 4e-63; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 186 - 354
Target Start/End: Complemental strand, 28290190 - 28290023
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||          
T  28290190 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcatttttaaatcgaacaaaatcgtccttaaactatatg-ttttt 28290092  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     ||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||    
T  28290091 tgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaacc 28290023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 181 - 354
Target Start/End: Original strand, 19291351 - 19291524
Alignment:
Q  181 tttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgn 280  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  19291351 tttttggcttaattacacttttggtcctactattttgaacaactcacaaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgt 19291450  T
Q  281 nnnnnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
          |||||||||||| ||||||| |||||| |||| || ||||||| ||||||||||||||||||||||||    
T  19291451 ttttttgcagttttagtcttatctccttatttccaactccataaacgcacagaaatgacagttttagtccaacc 19291524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 187 - 352
Target Start/End: Complemental strand, 8419165 - 8419002
Alignment:
Q  187 gcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnn 286  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||            
T  8419165 gcttaattacacttttggtcctaccattttgaccaactcacgaatatggtcctatcttttttaaattgaacaaaatcgtccttaaactatat--tttttt 8419068  T
Q  287 gcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaa 352  Q
    ||||||||||||||||||||||||||| |||| |||||||||| |||||||||| ||||| |||||    
T  8419067 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacaattttaatccaa 8419002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 186 - 354
Target Start/End: Complemental strand, 15029855 - 15029688
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||          
T  15029855 ggcttaattacacttttggtcctcccattttgaccaactcacgaaaatggtcttaccttttttaaatcgaacaaaatcgtccttaaactatatg-ttttt 15029757  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     ||||||||||| | ||||||||||||| |||| |||||||||| | ||||||||||||||||||||||    
T  15029756 tgcagttttagttcgatctccctatttcaaactccagaaacgcacataaatgacagttttagtccaacc 15029688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 174 - 354
Target Start/End: Complemental strand, 38901198 - 38901021
Alignment:
Q  174 ctaatattttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaac 273  Q
    ||||| ||||||||||||||||||||||||||||| | |||||||| ||  |||||||||||||||| | ||||||||||||||||||||||||||||||    
T  38901198 ctaattttttttggcttaattacacttttggtccttccattttgactaaagcacgaaaatggtcctaccctttttaaatcgaacaaaatcgtccttaaac 38901099  T
Q  274 tatatgnnnnnnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    ||||||       |||||||||||  ||||||| |||||| |||  |||||||||| | ||||||||||||||||||||||    
T  38901098 tatatg-ttttttgcagttttagttatatctccttatttccaac--cagaaacgcacataaatgacagttttagtccaacc 38901021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 186 - 318
Target Start/End: Original strand, 18149733 - 18149864
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    |||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  18149733 ggcttaattacacttttgatcctaccatttggaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttt 18149831  T
Q  286 ngcagttttagtcctatctccctatttctaact 318  Q
     |||||||||||||||| |||||||||| ||||    
T  18149832 tgcagttttagtcctatttccctatttccaact 18149864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 186 - 354
Target Start/End: Complemental strand, 4967317 - 4967148
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-nnnnn 284  Q
    |||||||||||||||||||||||   |||||||||||||||| ||||||||| || || ||||||||||||||||||||||| |||||||||||          
T  4967317 ggcttaattacacttttggtcctcacattttgaccaactcacaaaaatggtcttacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt 4967218  T
Q  285 nngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
      |||||||||||||||| |||||||||||||||  ||||||||| | |||||| |||||||||||||||    
T  4967217 ttgcagttttagtcctatatccctatttctaactctagaaacgcacataaatgatagttttagtccaacc 4967148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 186 - 354
Target Start/End: Complemental strand, 18150270 - 18150102
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    ||||||||||||||| || ||||  ||||||||| ||||||||||| |||||||| || ||||||||||||||||||| ||| |||||||||||          
T  18150270 ggcttaattacacttgtgatccttgtattttgacaaactcacgaaattggtcctacctcttttaaatcgaacaaaatcatccctaaactatatgtttttt 18150171  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     ||||||||||||||||||||||||||| |||| |||||||||| | ||||||| |||||||| |||||    
T  18150170 tgcagttttagtcctatctccctatttccaactccagaaacgcacataaatgaccgttttagttcaacc 18150102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 186 - 354
Target Start/End: Original strand, 28289684 - 28289851
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    |||||||||||||||||| ||||   |||||||||||||||||||| | ||| || || ||||||||||||||||||||||| |||| ||||||          
T  28289684 ggcttaattacacttttgatccttgcattttgaccaactcacgaaattagtcatacctcttttaaatcgaacaaaatcgtccctaaattatatgtttttt 28289783  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
      |||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||    
T  28289784 c-cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaacc 28289851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 186 - 354
Target Start/End: Complemental strand, 15115638 - 15115474
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    |||||||||||||||||| ||||   ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||           
T  15115638 ggcttaattacacttttgatcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccttaaactatat----ttt 15115543  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     |||||||||||| |||| ||||||||| ||||  | ||||||| | |||||||||||||||| |||||    
T  15115542 tgcagttttagtcatatcgccctatttccaactcaaaaaacgcacataaatgacagttttagttcaacc 15115474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 188 - 352
Target Start/End: Original strand, 39083361 - 39083525
Alignment:
Q  188 cttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatat-gnnnnnnn 286  Q
    |||||||||||||| | |||||  |||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||             
T  39083361 cttaattacacttt-gatcctatcattttgaccaactcacgaaaatggtcctattttttttaaatcgaacaaaattgttcttaaactatatatatttttt 39083459  T
Q  287 gcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaa 352  Q
    |||||||||||| ||||||| |||||| |||| ||||||| || ||||||||||||||||||||||    
T  39083460 gcagttttagtcatatctccatatttccaactccagaaacacacagaaatgacagttttagtccaa 39083525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 181 - 354
Target Start/End: Complemental strand, 21371247 - 21371075
Alignment:
Q  181 tttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgn 280  Q
    |||| |||||||||||||||||| ||||   |||||||||||||||  ||| |||||||| || ||||||||| ||||||||||||| |||||||||||     
T  21371247 ttttaggcttaattacacttttgatccttgcattttgaccaactcataaaattggtcctacctcttttaaatcaaacaaaatcgtccctaaactatatg- 21371149  T
Q  281 nnnnnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
          ||| ||||||||||||||||||||||| |||| |||||||||| | |||||||||||||||| |||||    
T  21371148 ttttttgcaattttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttagttcaacc 21371075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 190 - 343
Target Start/End: Original strand, 38900648 - 38900800
Alignment:
Q  190 taattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnngca 289  Q
    |||||||||||||||||||   ||||||||||||||||||||||| ||||| || ||||||||||||||||||||||| |||| ||||||       |||    
T  38900648 taattacacttttggtcctcgcattttgaccaactcacgaaaatgatcctacctcttttaaatcgaacaaaatcgtccctaaattatatg-ttttttgca 38900746  T
Q  290 gttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagtt 343  Q
    |||||||||||||||||||||||| |||| || ||||| | | |||||||||||    
T  38900747 gttttagtcctatctccctatttccaactccataaacgtacataaatgacagtt 38900800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 224 - 354
Target Start/End: Original strand, 5161620 - 5161750
Alignment:
Q  224 tcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnngcagttttagtcctatctccctatttctaactacaga 323  Q
    |||||||||| ||| |||||||||||||||||||||||| ||| ||||| ||||||       |||||||||||| ||||| |||||||| |||| || |    
T  5161620 tcacgaaaattgtcatatcttttttaaatcgaacaaaattgtctttaaattatatgtttttttgcagttttagtcttatcttcctatttccaacttcaaa 5161719  T
Q  324 aacgcatagaaatgacagttttagtccaacc 354  Q
    ||||||||||||||||||||||||| |||||    
T  5161720 aacgcatagaaatgacagttttagttcaacc 5161750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 189 - 266
Target Start/End: Original strand, 14340401 - 14340478
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtc 266  Q
    ||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  14340401 ttaattacatttttggtcctaccattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtc 14340478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 187 - 354
Target Start/End: Complemental strand, 32697771 - 32697602
Alignment:
Q  187 gcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg--nnnnn 284  Q
    |||||||||||||||||||| |   |||||||||||||||||||| |||||||| || |||||||||||||| |||||||| |||||||||||           
T  32697771 gcttaattacacttttggtcattgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacagaatcgtccctaaactatatgttttatt 32697672  T
Q  285 nngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
      |||||||||||  || ||||||||||| |||| ||||||| || ||||||||||  ||||||||||||    
T  32697671 ttgcagttttagtgatacctccctatttccaactccagaaacacacagaaatgacaaatttagtccaacc 32697602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 189 - 354
Target Start/End: Original strand, 4966819 - 4966982
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnngc 288  Q
    ||||||||||||||||||||   |||||||||||||||||||||| || ||  || ||||||||||||||||||||||| |||||||||||       ||    
T  4966819 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatagtactgcctcttttaaatcgaacaaaatcgtccctaaactatatg-tttttagc 4966917  T
Q  289 agttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    |||||||||| |||| ||||||||| ||||  ||||| ||| ||||||||||||||| | ||||||    
T  4966918 agttttagtcatatc-ccctatttccaactctagaaatgcacagaaatgacagttttgggccaacc 4966982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 189 - 276
Target Start/End: Original strand, 21370689 - 21370776
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 276  Q
    ||||||| | |||| ||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||| |||||||||    
T  21370689 ttaattatattttttgtcctactattttgaccaactgacgaaaatggttatatcttttttaaatcgaacaaaatcgtctttaaactat 21370776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 109 - 178
Target Start/End: Complemental strand, 31619036 - 31618967
Alignment:
Q  109 agttacaaattgtagattaccatagtccataggatatacattgcatctttcacacataaggttaactaat 178  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||    
T  31619036 agttacaaattgtagattaccatagtccatagcatatacattgcatttttcacacacaaggttaactaat 31618967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 189 - 354
Target Start/End: Complemental strand, 14340953 - 14340786
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaac--tatatgnnnnnnn 286  Q
    ||||||||| ||||||| ||   |||||||||||||||||||| ||||| ||  | ||||||||||||||||||||||| |||||  |||||            
T  14340953 ttaattacatttttggtacttgcattttgaccaactcacgaaattggtcatacatcttttaaatcgaacaaaatcgtccataaactatatattttttttt 14340854  T
Q  287 gcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    | |||||||||||||||||| |||||| |||| || ||||| | ||||||||||||||||||| ||||    
T  14340853 gtagttttagtcctatctccttatttccaactccaaaaacgtagagaaatgacagttttagtcaaacc 14340786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 187 - 347
Target Start/End: Original strand, 10721787 - 10721945
Alignment:
Q  187 gcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnn 286  Q
    ||||||||||| ||||||||||   |||||||||| ||||||||||||||| | ||| ||| ||||||||||||||||||| ||||||||              
T  10721787 gcttaattacatttttggtcctcacattttgaccagctcacgaaaatggtcttgtctctttcaaatcgaacaaaatcgtcc-taaactatcatgtttttt 10721885  T
Q  287 gcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttag 347  Q
    ||||||||||||||| || |||||||  |||| |||||||| | |||||||||||||||||    
T  10721886 gcagttttagtcctacct-cctattttcaactccagaaacgtagagaaatgacagttttag 10721945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 186 - 276
Target Start/End: Complemental strand, 22651857 - 22651767
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 276  Q
    ||||||||||||||||| |||||   |||||||||| |||||||||||||| ||  |||||| ||||||||||||||||||| ||||||||    
T  22651857 ggcttaattacactttttgtcctcgcattttgaccagctcacgaaaatggttctgcctttttcaaatcgaacaaaatcgtccataaactat 22651767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 188 - 354
Target Start/End: Original strand, 22651347 - 22651512
Alignment:
Q  188 cttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgnnnnnnn 286  Q
    |||||||||| ||||||| ||  ||||||||||| |||||| |||||||| |  || ||||||||| ||||||| | |||||||||||| |||           
T  22651347 cttaattacatttttggttctcgtattttgaccagctcacggaaatggtcatgcctcttttaaatcaaacaaaaccatccttaaactatcatg--ttttt 22651444  T
Q  287 gcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    ||||||||||||||| |||| |||||  |||| |||||||||| | ||||| ||||||||||||||||    
T  22651445 gcagttttagtcctacctccttattttcaactccagaaacgcacaaaaatggcagttttagtccaacc 22651512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 186 - 347
Target Start/End: Complemental strand, 41834605 - 41834445
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgnnnnn 284  Q
    |||||||||||||||||||||||   |||||||||| |||||||||||||||||  || ||| | ||||||||||| ||||| |||||||| |||         
T  41834605 ggcttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcagatcgaacaaaaccgtcc-taaactatcatgttttt 41834507  T
Q  285 nngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttag 347  Q
      ||||||||||||||| || |||||||  ||||   |||||||| |||||||||||||||||    
T  41834506 ttgcagttttagtcctacct-cctattttcaactcttgaaacgcagagaaatgacagttttag 41834445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 276
Target Start/End: Complemental strand, 20266458 - 20266371
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 276  Q
    |||||| |||||||||||||  ||||||||||| || |||||||||||| | ||| ||| ||||||||||||||||||| ||||||||    
T  20266458 ttaattgcacttttggtcctcgtattttgaccagcttacgaaaatggtcatgtctctttcaaatcgaacaaaatcgtccctaaactat 20266371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 186 - 279
Target Start/End: Original strand, 16752582 - 16752675
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 279  Q
    ||||||||||||||||||||||    |||||||||| |||||||||||| || |   | ||| ||||||||||||||||||| |||||||||||    
T  16752582 ggcttaattacacttttggtccctgcattttgaccagctcacgaaaatgatcatgcttctttcaaatcgaacaaaatcgtccataaactatatg 16752675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 347
Target Start/End: Original strand, 27307061 - 27307220
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    |||||||||||||||||||| ||   ||||||||||||| | |||||||||| | | | ||| |||| |||||||||| |||| |||||||             
T  27307061 ggcttaattacacttttggttctcgcattttgaccaacttatgaaaatggtcatgtttctttcaaattgaacaaaatcatcct-aaactatcatgttttt 27307159  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttag 347  Q
     |||||||||||| || |||| |||||  |||| ||||||||||||||||||||||||||||    
T  27307160 tgcagttttagtcttacctcc-tattttcaactccagaaacgcatagaaatgacagttttag 27307220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 186 - 325
Target Start/End: Complemental strand, 5162115 - 5161976
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    |||||||||||| ||||  ||||   ||||||||||||||| || | | ||| || || ||||||||||||||||||||||| |||| ||||||          
T  5162115 ggcttaattacattttttatccttgcattttgaccaactcatgagattagtcatacctcttttaaatcgaacaaaatcgtccctaaattatatgtttttt 5162016  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaa 325  Q
     ||| ||||||||||||||||| ||||  |||| ||||||    
T  5162015 tgcaattttagtcctatctcccaatttacaacttcagaaa 5161976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 186 - 276
Target Start/End: Complemental strand, 17260766 - 17260676
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 276  Q
    ||||||||| |||||||||||||   ||||||||||| ||||||||||| | ||| || ||| ||||||||||||| | ||| ||||||||    
T  17260766 ggcttaattgcacttttggtcctcgcattttgaccaattcacgaaaatgattctacctctttcaaatcgaacaaaaccatccctaaactat 17260676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 279
Target Start/End: Complemental strand, 27307611 - 27307513
Alignment:
Q  181 tttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 279  Q
    ||||| ||||||||| |||||||||||    ||||||||||  ||||||||||||| ||  || ||| ||||||||||||| ||||| |||||||||||    
T  27307611 tttttagcttaattagacttttggtccccgcattttgaccagttcacgaaaatggttctccctctttcaaatcgaacaaaaccgtccataaactatatg 27307513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 212 - 347
Target Start/End: Original strand, 32305844 - 32305977
Alignment:
Q  212 attttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgnnnnnnngcagttttagtcctatctccctat 310  Q
    ||||||| || ||||||||||| || ||| || ||||||||||||||||||||||| |||||||| |||       ||||||||||||||| || | |||    
T  32305844 attttgatcagctcacgaaaattgttctacctcttttaaatcgaacaaaatcgtccctaaactatcatg--tttttgcagttttagtcctacct-cttat 32305940  T
Q  311 ttctaactacagaaacgcatagaaatgacagttttag 347  Q
    ||  |||| ||||||| || |||||||||||||||||    
T  32305941 tttcaactccagaaacacagagaaatgacagttttag 32305977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 267
Target Start/End: Complemental strand, 28495377 - 28495296
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtcc 267  Q
    |||||||||||||||||||||    ||||||||||| ||||||||||||||| |  || ||| |||||||||||||| ||||    
T  28495377 ggcttaattacacttttggtctccatattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaattgtcc 28495296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 239
Target Start/End: Original strand, 164189 - 164244
Alignment:
Q  184 ttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    |||||||||||||||||||||||||  | |||||||| |||||||||| |||||||    
T  164189 ttggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcct 164244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 287 - 354
Target Start/End: Original strand, 14340480 - 14340547
Alignment:
Q  287 gcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    ||||||||| ||||||||| ||||||| ||||  ||||||  | ||||||||||||||||||||||||    
T  14340480 gcagttttaatcctatctctctatttccaactctagaaacctacagaaatgacagttttagtccaacc 14340547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 24362381 - 24362328
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    |||||||||||||||||||||||  ||||||| || |||||||||| |||||||    
T  24362381 ggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcct 24362328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 269
Target Start/End: Original strand, 8647437 - 8647521
Alignment:
Q  185 tggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtcctt 269  Q
    ||||||||||||||||||||||||  | ||||| || |||||||||| |||||||  | |||| |||  ||||||||| ||||||    
T  8647437 tggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccgttttaaaacagaacaaaatggtcctt 8647521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 261
Target Start/End: Original strand, 19359135 - 19359211
Alignment:
Q  185 tggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaa 261  Q
    ||||||||||||||||||||||||  | ||||| || |||||||||| |||||||  | |||| |||| ||||||||    
T  19359135 tggcttaattacacttttggtcctcttgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaa 19359211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 276
Target Start/End: Original strand, 28595182 - 28595270
Alignment:
Q  188 cttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 276  Q
    ||||||| |||||||||||||  ||||||||||| || || ||||||||| |   | ||| ||| ||||||||||||||| ||||||||    
T  28595182 cttaattgcacttttggtcctcgtattttgaccagcttacaaaaatggtcatgcttctttcaaaacgaacaaaatcgtccctaaactat 28595270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 239
Target Start/End: Complemental strand, 5819476 - 5819421
Alignment:
Q  184 ttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    |||||||||||||||||||||||||  | ||||| || |||||||||| |||||||    
T  5819476 ttggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 5819421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 18183520 - 18183461
Alignment:
Q  180 ttttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    ||||| |||||||||||||||||||||||  | ||||| || |||||||||| |||||||    
T  18183520 tttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 18183461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 347
Target Start/End: Original strand, 28494845 - 28495003
Alignment:
Q  187 gcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnn 286  Q
    ||||||||||||||||||||||   ||||||||||  ||| ||||||||| ||  || ||| |||||||||||||  |||| ||||||||              
T  28494845 gcttaattacacttttggtccttacattttgaccagttcaggaaaatggttctgcctctttcaaatcgaacaaaactgtcc-taaactatcatgtttttt 28494943  T
Q  287 gcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttag 347  Q
    ||||||||||||||| || |||||||  |||| |||||||||| |||| ||||| ||||||    
T  28494944 gcagttttagtcctacct-cctattttcaactccagaaacgcagagaagtgacaattttag 28495003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 15708971 - 15709021
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggt 236  Q
    |||||||||||||||||||||||| | ||||| || |||||||||| ||||    
T  15708971 ggcttaattacacttttggtcctagtgttttggcctactcacgaaactggt 15709021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 329
Target Start/End: Original strand, 21370794 - 21370836
Alignment:
Q  287 gcagttttagtcctatctccctatttctaactacagaaacgca 329  Q
    ||| ||||||||||||||||||||||| |||| ||||||||||    
T  21370794 gcaattttagtcctatctccctatttccaactccagaaacgca 21370836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 2865300 - 2865247
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    |||||||||||||||||||||||  | ||||| || |||||||||| |||||||    
T  2865300 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 2865247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 257
Target Start/End: Complemental strand, 16753114 - 16753045
Alignment:
Q  188 cttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaac 257  Q
    |||||||||| |||||||| |   ||||||||||||||||||||||||| ||  || ||| |||||||||    
T  16753114 cttaattacatttttggtcatcgcattttgaccaactcacgaaaatggttctgcctctttcaaatcgaac 16753045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 19359681 - 19359628
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    |||||||||||||||||||||||  | ||||| || |||||||||| |||||||    
T  19359681 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 19359628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 24331559 - 24331612
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    |||||||||||||||||||||||  | |||||| | |||||||||| |||||||    
T  24331559 ggcttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcct 24331612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 269
Target Start/End: Original strand, 4623147 - 4623231
Alignment:
Q  185 tggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtcctt 269  Q
    |||||||||||||||||||||| |  | |||||||  |||||||||| |||||||  || ||| |||  ||||||||| ||||||    
T  4623147 tggcttaattacacttttggtcatcgtgttttgacttactcacgaaattggtcctgcctctttaaaacagaacaaaattgtcctt 4623231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 276
Target Start/End: Original strand, 13557018 - 13557081
Alignment:
Q  212 attttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 276  Q
    |||||||||| ||||||||||||||| |  || ||| ||||| ||||||||||| ||||||||||    
T  13557018 attttgaccagctcacgaaaatggtcatgcctctttcaaatcaaacaaaatcgt-cttaaactat 13557081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 15372425 - 15372365
Alignment:
Q  179 attttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    |||||| || ||||||||||||||||||||  | ||||| || |||||||||| |||||||    
T  15372425 atttttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 15372365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 122; Significance: 2e-62; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 183 - 354
Target Start/End: Original strand, 34789379 - 34789549
Alignment:
Q  183 tttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnn 282  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       
T  34789379 tttggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-tt 34789477  T
Q  283 nnnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
        ||||||||||||||||||||||||||| |||| |||||||||| | |||||||| |||||||||||||    
T  34789478 ttttgcagttttagtcctatctccctatttcaaactccagaaacgcacataaatgacaattttagtccaacc 34789549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 184 - 354
Target Start/End: Original strand, 21034233 - 21034403
Alignment:
Q  184 ttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnn 283  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        
T  21034233 ttggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 21034332  T
Q  284 nnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
        ||||||||||| |||||||||||||| |||| || ||||||| | ||||||||||||||||||||||    
T  21034333 tttacagttttagtcatatctccctatttccaactccataaacgcacataaatgacagttttagtccaacc 21034403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 180 - 354
Target Start/End: Complemental strand, 56077876 - 56077703
Alignment:
Q  180 ttttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 279  Q
    ||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  56077876 tttttgggcttaattacatttttggtcctaccattttgaccaactcacgaaaatggtcttatcttttttaaatcgaacaaaatcgtccttaaactatatg 56077777  T
Q  280 nnnnnnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
           ||||||||||||||||||||||||||| ||||  ||||||||| | ||||||||||||||||||||||    
T  56077776 -ttttttgcagttttagtcctatctccctatttccaactctagaaacgcacaaaaatgacagttttagtccaacc 56077703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 186 - 354
Target Start/End: Original strand, 26974283 - 26974451
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    ||||||||||||||||||||||||| ||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||          
T  26974283 ggcttaattacacttttggtcctaccattttaacaaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 26974382  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
      |||||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||| |||||    
T  26974383 tacagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagttcaacc 26974451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 189 - 354
Target Start/End: Complemental strand, 45839092 - 45838926
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg--nnnnnnn 286  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||             
T  45839092 ttaattacacttttggtcctactattttgaccaactcacgaaa-tggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttttt 45838994  T
Q  287 gcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    |||||||||||||||||| |||||||| |||| |||||||||| ||||||||||||||||||||||||    
T  45838993 gcagttttagtcctatcttcctatttccaactccagaaacgcacagaaatgacagttttagtccaacc 45838926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 183 - 354
Target Start/End: Complemental strand, 28465630 - 28465460
Alignment:
Q  183 tttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnn 282  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       
T  28465630 tttggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-tt 28465532  T
Q  283 nnnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
        ||| ||||||||||||||||||||||| |||| || ||||||| | ||||  ||||||||||||||||    
T  28465531 ttttgcaattttagtcctatctccctatttccaactccataaacgcacataaatagcagttttagtccaacc 28465460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 186 - 354
Target Start/End: Complemental strand, 14440374 - 14440207
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    |||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||          
T  14440374 ggcttaattatacttttggtcctaccattttgaccaacttacgaaaatggtcctatcttttttaaatcgaacaaaatcatccttaaactatatg-ttttt 14440276  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     |||||||||||| |||||||||||||| ||||  ||||||||| ||||||||||||||||||||||||    
T  14440275 tgcagttttagtcatatctccctatttccaactctagaaacgcacagaaatgacagttttagtccaacc 14440207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 188 - 354
Target Start/End: Complemental strand, 54441113 - 54440948
Alignment:
Q  188 cttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnng 287  Q
    ||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |    
T  54441113 cttaattacacttttggtcctaccattttgatcagctcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttttg 54441015  T
Q  288 cagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    |||||||||||||||||||||||||| |||| ||||||||||    |||||||||||||||||||||    
T  54441014 cagttttagtcctatctccctatttccaactccagaaacgcacgtcaatgacagttttagtccaacc 54440948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 186 - 353
Target Start/End: Original strand, 12593024 - 12593190
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||          
T  12593024 ggcttaattacacttttggtcctaccagtttgaccaactcacgaaaatggtcataccttttttaaatcgaacaaaatcgtccttaaactatatg-ttttt 12593122  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaac 353  Q
     ||| ||||| ||||||||||||||||  |||| |||||||||| |||||||||||||||||||||||    
T  12593123 tgcaattttaatcctatctccctattttcaactccagaaacgcacagaaatgacagttttagtccaac 12593190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 189 - 354
Target Start/End: Original strand, 41114160 - 41114326
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-nnnnnnng 287  Q
    ||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||        |    
T  41114160 ttaatgacacttttggtcctaccattttgaccaactcacgaaaagggtcctatcttttttaaatcgaacaaaaacgtccttaaactatatgttttttttg 41114259  T
Q  288 cagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    ||||||||||| |||||||||||||| ||||  ||||||||| |||||||||| |||||||||||||    
T  41114260 cagttttagtcatatctccctatttccaactctagaaacgcacagaaatgacaattttagtccaacc 41114326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 189 - 346
Target Start/End: Original strand, 28166007 - 28166163
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnngc 288  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||        ||    
T  28166007 ttaattaaatttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatat-tttttttgc 28166105  T
Q  289 agttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagtttta 346  Q
    ||||||||||||||||||||||||  ||||||| ||||||| |||||||| |||||||    
T  28166106 agttttagtcctatctccctattttcaactacaaaaacgcacagaaatgatagtttta 28166163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 186 - 354
Target Start/End: Original strand, 46736655 - 46736822
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||          
T  46736655 ggcttaattatacttttggttctactattttgaccaactcacgaaaatggtcttattttttttaaatcgaacaaaattgtccttaaactatatg-ttttt 46736753  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     |||| |||| ||||||||||||||||  |||| |||||||||| |||||||||||||||||| |||||    
T  46736754 tgcagatttaatcctatctccctattttcaactccagaaacgcacagaaatgacagttttagttcaacc 46736822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 188 - 354
Target Start/End: Complemental strand, 34789927 - 34789761
Alignment:
Q  188 cttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnng 287  Q
    |||||||||||||||||||||   |||||||||||||||||||| |||||||| || |||||||||||||||||| |||| |||||||||||       |    
T  34789927 cttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaattgtccctaaactatatgtttttttg 34789828  T
Q  288 cagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    |||||||||||||||||||||||||| |||| || ||||||| | ||||||||||||||||||||||    
T  34789827 cagttttagtcctatctccctatttccaactccaaaaacgcacataaatgacagttttagtccaacc 34789761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 186 - 350
Target Start/End: Original strand, 19528869 - 19529033
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    |||||||||||||||||||||||   ||||||||||| |||||||| |||||||| || |||||||||||| |||||||||| |||||||||||          
T  19528869 ggcttaattacacttttggtccttgcattttgaccaattcacgaaattggtcctacctcttttaaatcgaataaaatcgtccctaaactatatgtttttt 19528968  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtcc 350  Q
     ||||||||||||||||||||||||||| |||| | |||||||| ||||||||||||||||||||    
T  19528969 tgcagttttagtcctatctccctatttccaactccggaaacgcacagaaatgacagttttagtcc 19529033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 189 - 354
Target Start/End: Complemental strand, 34807682 - 34807518
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnngc 288  Q
    ||||||| | |||||||| || |||||||| ||||||||||||||  | ||||||||||||| ||||||||||||||||||||||||||||       ||    
T  34807682 ttaattatatttttggtcttattattttgatcaactcacgaaaattattctatcttttttaattcgaacaaaatcgtccttaaactatatgtttttg-gc 34807584  T
Q  289 agttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    ||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||    
T  34807583 agttttagtcctatctccctatttccaactccataaacgcatagaaatgacagttttagtccaacc 34807518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 186 - 354
Target Start/End: Complemental strand, 46737201 - 46737034
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    |||||||||||||||||||||||   |||||||||||||||||||| |||||||| || ||||||||||||||||||||||| |||||||||||          
T  46737201 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg-ttttt 46737103  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     |||||||||||| ||||| ||||| || |||| |||||||||| ||||||||||||||||||||||||    
T  46737102 tgcagttttagtcatatcttcctatctccaactccagaaacgcacagaaatgacagttttagtccaacc 46737034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 186 - 352
Target Start/End: Complemental strand, 55677504 - 55677338
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    |||||||||||||||||||||||  ||||||||||||||||||||| |||||||| || ||||||||||||||||||||||  |||||||||||          
T  55677504 ggcttaattacacttttggtccttgtattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtctctaaactatatgtttttt 55677405  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaa 352  Q
      || ||||||||||||||||||||||| |||| || ||||||| | ||||||||||||||||||||    
T  55677404 tacaattttagtcctatctccctatttccaactccataaacgcacataaatgacagttttagtccaa 55677338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 189 - 354
Target Start/End: Original strand, 6616675 - 6616840
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnngc 288  Q
    ||||||||||||||||| |||  ||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||       ||    
T  6616675 ttaattacacttttggttctatcattttgatcaactcacgaaaatggtcttattttttttaaatcgaacaaaatcgtccttaaactatatgtttttttgc 6616774  T
Q  289 agttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     || ||||||||| ||| ||||||| |||| |||||||||| | ||||||||||||||||||||||    
T  6616775 tgtgttagtcctacctctctatttccaactccagaaacgcacataaatgacagttttagtccaacc 6616840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 189 - 354
Target Start/End: Original strand, 14439831 - 14439995
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnngc 288  Q
    ||||||||| ||||||||||   |||||||||||||||||||| ||||| || |||||||||||  ||||||||||||| |||||||||||       ||    
T  14439831 ttaattacatttttggtccttgcattttgaccaactcacgaaattggtcataccttttttaaattaaacaaaatcgtccctaaactatatgtttttt-gc 14439929  T
Q  289 agttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    ||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||    
T  14439930 agttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaacc 14439995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 186 - 354
Target Start/End: Complemental strand, 21034783 - 21034615
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    |||||||||||| ||||||||||   |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| | ||||||||           
T  21034783 ggcttaattacaattttggtccttgcattttgaccaactcacgaaattggtcctatctcttttaaatcgaacaaaatcgtccctgaactatatttttttt 21034684  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     ||||||||||| ||||||||||||||| |||| ||||||| || | ||||||||||||||||||||||    
T  21034683 tgcagttttagttctatctccctatttccaactccagaaacacacaaaaatgacagttttagtccaacc 21034615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 186 - 354
Target Start/End: Original strand, 34807116 - 34807284
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    |||||||||||||||||||||||   ||||||| |||||||||||| ||||| || || ||||||||||||||||||||||| |||| ||||||          
T  34807116 ggcttaattacacttttggtccttgcattttgatcaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaagtatatgtttttt 34807215  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     |||||||||||||||||||| |||||| |||| |||||||||| | ||||||||||||||||||||||    
T  34807216 tgcagttttagtcctatctccatatttccaactccagaaacgcacataaatgacagttttagtccaacc 34807284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 186 - 354
Target Start/End: Original strand, 33689829 - 33689995
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    |||||||||||||||||||||||   |||||||||||||||| ||| |||||||| || |||||||||||||||||||||||||||||||||||          
T  33689829 ggcttaattacacttttggtccttgcattttgaccaactcacaaaattggtcctacctcttttaaatcgaacaaaatcgtccttaaactatatg--tttt 33689926  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     |||||||||||| |||||||||||||  |||| |||||||||| | |||||||||| |||||||||||    
T  33689927 tgcagttttagtcatatctccctatttacaactccagaaacgcacataaatgacagtgttagtccaacc 33689995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 180 - 354
Target Start/End: Complemental strand, 12593575 - 12593402
Alignment:
Q  180 ttttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 279  Q
    ||||| |||||||||||||||||||||||   |||||||||||||||||||| ||||| || || ||||||||||||||||||||||  ||||||||||     
T  12593575 tttttaggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtctgtaaactatat- 12593477  T
Q  280 nnnnnnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
           ||||||||||||||||||||||||||  |||| |||||||||| || |||||||||||||||||||||    
T  12593476 attttttgcagttttagtcctatctccctattttcaactccagaaacgcacaggaatgacagttttagtccaacc 12593402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 179 - 354
Target Start/End: Original strand, 28465074 - 28465248
Alignment:
Q  179 attttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatat 278  Q
    |||||| | ||||||||||||||| ||||| | ||||||||||||| |||||| || ||||| || ||||||||||||||||||||||||||||||||||    
T  28465074 atttttagacttaattacacttttagtccttccattttgaccaacttacgaaattgatcctacctcttttaaatcgaacaaaatcgtccttaaactatat 28465173  T
Q  279 gnnnnnnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    |       |||||||||||| |||||||||||||  |||| |||||||||| | ||||||||||||||||||||||    
T  28465174 g-ttttttgcagttttagtcatatctccctattttcaactccagaaacgcacataaatgacagttttagtccaacc 28465248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 188 - 354
Target Start/End: Original strand, 54440573 - 54440736
Alignment:
Q  188 cttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnng 287  Q
    |||||||||||||||||||||   |||||||||||||||||||| |||||||| || ||||||||||||||||||||||| |||||||| |        |    
T  54440573 cttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatgt---tttttg 54440669  T
Q  288 cagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    |||||||||||||||||||||||||  |||| |||||| ||| ||||||||||||||||||||||||    
T  54440670 cagttttagtcctatctccctattttcaacttcagaaatgcacagaaatgacagttttagtccaacc 54440736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 180 - 354
Target Start/End: Original strand, 45838541 - 45838714
Alignment:
Q  180 ttttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 279  Q
    ||||| |||||| ||||||||||||||||  |||||||||||||||||| || |||||||| || ||||||||||||||||||||||| |||||||||||    
T  45838541 tttttaggcttatttacacttttggtccttgtattttgaccaactcacgtaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg 45838640  T
Q  280 nnnnnnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
           |||||||||||||||||||||||||||  ||| || ||||||| |||||||| |||||| ||||||||    
T  45838641 -ttttttgcagttttagtcctatctccctatttcctacttcaaaaacgcacagaaatgatagtttttgtccaacc 45838714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 180 - 354
Target Start/End: Complemental strand, 19529246 - 19529072
Alignment:
Q  180 ttttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 279  Q
    ||||| |||||||||||||||||| |||||| ||||||||||||| |  |||||| | |||||| |||||||| ||||||||||||| ||||||||||||    
T  19529246 tttttaggcttaattacacttttgctcctaccattttgaccaacttataaaaatgattctatctcttttaaattgaacaaaatcgtctttaaactatatg 19529147  T
Q  280 nnnnnnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
           ||||||||||| |||||||| |||||| ||||  | ||||||| ||||||||||||||||||||||||    
T  19529146 tttttttgcagttttagttctatctccatatttccaacttaaaaaacgcacagaaatgacagttttagtccaacc 19529072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 188 - 354
Target Start/End: Complemental strand, 24852010 - 24851844
Alignment:
Q  188 cttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnng 287  Q
    |||||||| ||||||||||||   |||||||||||||||||||| || ||||| || ||||||||||||||||||||||| |||||||||||       |    
T  24852010 cttaattatacttttggtccttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttg 24851911  T
Q  288 cagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    |||||||||||||||||  ||||||| |||| |||||||||| |||||||| ||||||||| |||||    
T  24851910 cagttttagtcctatctttctatttccaactccagaaacgcacagaaatgaaagttttagtacaacc 24851844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 189 - 354
Target Start/End: Original strand, 36168332 - 36168499
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnn-- 286  Q
    ||||||||||||||| ||||   |||||||||||| ||||||| ||||| || || |||||||||||||||||||||||||||| ||||||             
T  36168332 ttaattacacttttgctccttgcattttgaccaacccacgaaattggtcttacctcttttaaatcgaacaaaatcgtccttaaattatatgttttttttt 36168431  T
Q  287 gcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    |||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||    
T  36168432 gcagttttagtcttatctccctatttctaactccagaaacgcatataaatgacagttatagtccaacc 36168499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 186 - 277
Target Start/End: Original strand, 24851316 - 24851407
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactata 277  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  24851316 ggcttaattacacttttgatcctaccattttgaccaactcacgaaaatggtgctatcttttttaaattgaacaaaatcgtccttaaactata 24851407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 180 - 354
Target Start/End: Complemental strand, 36168883 - 36168710
Alignment:
Q  180 ttttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 279  Q
    ||||| |||||||||||||| |||||||||| ||||||||||||||||||||||| |||||| |||||||||| |||||||||  | |||||| ||||||    
T  36168883 tttttaggcttaattacactcttggtcctaccattttgaccaactcacgaaaatgatcctattttttttaaatagaacaaaattattcttaaattatatg 36168784  T
Q  280 nnnnnnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
           || |||||||||||||||||||||||  |||| || ||| ||| | |||| |||||||||||||||||    
T  36168783 -ttttttgcggttttagtcctatctccctattttcaactccataaatgcacataaatcacagttttagtccaacc 36168710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 180 - 354
Target Start/End: Original strand, 35643549 - 35643734
Alignment:
Q  180 ttttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 279  Q
    ||||| || ||||| ||||| |||||| ||| |||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||    
T  35643549 tttttaggtttaatcacactattggtcttaccattttgaccaactcacgaaaatggtcctatctttttaaaattgaataaaatcgtccttaaactatatg 35643648  T
Q  280 -----------nnnnnnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
                      ||||||||||||||||||||||||||  |||| || ||||||| ||||||||||||||||||||||||    
T  35643649 ttttttttttttttttttgcagttttagtcctatctccctatttacaactccataaacgcacagaaatgacagttttagtccaacc 35643734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 189 - 354
Target Start/End: Original strand, 41608377 - 41608542
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnn-- 286  Q
    ||||||||||||||||||||   ||||||| ||||||| |||| ||||| || || |||||||||||||||||||||||  ||||||||||             
T  41608377 ttaattacacttttggtccttgcattttgatcaactcatgaaattggtcatacctcttttaaatcgaacaaaatcgtcc--aaactatatgttttttttt 41608474  T
Q  287 gcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    |||||||||||||||||||| |||||| |||| || ||||||| ||||||||||||||||||||||||    
T  41608475 gcagttttagtcctatctccatatttccaacttcaaaaacgcacagaaatgacagttttagtccaacc 41608542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 186 - 277
Target Start/End: Complemental strand, 41608961 - 41608870
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactata 277  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| |||||||| || ||||||||| ||||||||||| |||||||||||    
T  41608961 ggcttaattacacttttggtcctaccattttgaccaactcacgaaattggtcctacctcttttaaatccaacaaaatcgttcttaaactata 41608870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 188 - 274
Target Start/End: Original strand, 1397597 - 1397683
Alignment:
Q  188 cttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaact 274  Q
    |||||||||||||||| ||| || |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  1397597 cttaattacacttttgatccaaccattttgaccaactcataaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaact 1397683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 189 - 279
Target Start/End: Original strand, 33777635 - 33777725
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 279  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||| || ||| ||||| |||||||||||||||||||||||||||||||    
T  33777635 ttaattacacttttgttcctaccattttgaccaactcacgaaaatgatcatatttttttaaaatcgaacaaaatcgtccttaaactatatg 33777725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 212 - 347
Target Start/End: Original strand, 35193334 - 35193467
Alignment:
Q  212 attttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnngcagttttagtcctatctccctatt 311  Q
    ||||||| || |||||||||||||||||| || ||| ||||||||||||||||||| |||||||||||       |||||||||||||||||| ||||||    
T  35193334 attttgatcagctcacgaaaatggtcctacctctttcaaatcgaacaaaatcgtccctaaactatatg-ttttttgcagttttagtcctatct-cctatt 35193431  T
Q  312 tctaactacagaaacgcatagaaatgacagttttag 347  Q
    |  |||| |||||||||| |||||||||||||||||    
T  35193432 ttcaacttcagaaacgcagagaaatgacagttttag 35193467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 189 - 354
Target Start/End: Complemental strand, 16215038 - 16214874
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnngc 288  Q
    ||||||| |||||||||||||  ||||||| ||||| ||||||||| || |||||||||||||| ||| |||||||||||||||||||||        ||    
T  16215038 ttaattatacttttggtcctatcattttgatcaacttacgaaaatgatcatatcttttttaaattgaataaaatcgtccttaaactatat-attttttgc 16214940  T
Q  289 agttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    ||||||| | |||||| |||||||  |||| ||||||| || | |||||| |||||||||||||||    
T  16214939 agttttaattctatcttcctattttcaactccagaaacacacataaatgatagttttagtccaacc 16214874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 212 - 279
Target Start/End: Complemental strand, 17504479 - 17504412
Alignment:
Q  212 attttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 279  Q
    ||||||| || ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  17504479 attttgaacagctcacgaaaatggtcctatctcttttaaatcgaacaaaaccgtccttaaactatatg 17504412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 183 - 278
Target Start/End: Complemental strand, 30598068 - 30597973
Alignment:
Q  183 tttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatat 278  Q
    |||||||| |||||||||||||||||  | |||||||||||||||| || |||| || ||| ||||||||||||||||||||||| |||| |||||    
T  30598068 tttggcttgattacacttttggtcctcgtgttttgaccaactcacggaattggttctgtctcttttaaatcgaacaaaatcgtccctaaattatat 30597973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 182 - 318
Target Start/End: Complemental strand, 33778162 - 33778027
Alignment:
Q  182 ttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnn 281  Q
    ||||| ||||||||||||||| || |||| |||||||| |||||||||||||| | ||| || ||||||||| ||||||||||| | |||| ||||||      
T  33778162 ttttgacttaattacacttttcgttctaccattttgactaactcacgaaaatgattctacctcttttaaatcaaacaaaatcgttcctaaattatatg-t 33778064  T
Q  282 nnnnngcagttttagtcctatctccctatttctaact 318  Q
         ||||||||||| ||||||||||||||| ||||    
T  33778063 tttttgcagttttagttctatctccctatttccaact 33778027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 189 - 354
Target Start/End: Complemental strand, 229702 - 229538
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgnnnnnnng 287  Q
    |||||||||||||||||| |   |||||||||| ||||||||||||||| |  || ||| ||||| |||||||||||||||||||||| |||       |    
T  229702 ttaattacacttttggtcttcgcattttgaccagctcacgaaaatggtcttgcctctttcaaatcaaacaaaatcgtccttaaactatcatg--tttttg 229605  T
Q  288 cagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    |||||||| ||||| |||| |||||  |||| |||||||||| |||| ||||| ||||||| |||||    
T  229604 cagttttaatcctacctccttattttcaactccagaaacgcacagaagtgacaattttagtacaacc 229538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 212 - 325
Target Start/End: Complemental strand, 6617182 - 6617070
Alignment:
Q  212 attttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnngcagttttagtcctatctccctatt 311  Q
    |||||||| ||||||||||| |||||||| || |||||||||||| |||||||||| ||||||||||        ||||||||||||||||||||||||     
T  6617182 attttgactaactcacgaaattggtcctacctcttttaaatcgaataaaatcgtccctaaactatat-tttttttgcagttttagtcctatctccctatc 6617084  T
Q  312 tctaactacagaaa 325  Q
    || |||| ||||||    
T  6617083 tccaactccagaaa 6617070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 180 - 313
Target Start/End: Complemental strand, 26974797 - 26974664
Alignment:
Q  180 ttttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 279  Q
    |||| ||| ||||||||| ||||||||||   |||||||  || |||||||| |||||||| || |||||||||||||||||| |||| |||||||||||    
T  26974797 ttttatgggttaattacatttttggtccttgcattttgaataattcacgaaattggtcctacctcttttaaatcgaacaaaattgtccctaaactatatg 26974698  T
Q  280 nnnnnnngcagttttagtcctatctccctatttc 313  Q
           |||||||||||| ||||| ||||||||    
T  26974697 tttttttgcagttttagtcatatcttcctatttc 26974664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 276
Target Start/End: Original strand, 229164 - 229251
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 276  Q
    ||||||||||||||||||||  ||||||||||| ||| ||||||||||| |  || ||| |||| |||||||||||||||||||||||    
T  229164 ttaattacacttttggtcctcgtattttgaccagctcgcgaaaatggtcttgcctctttcaaattgaacaaaatcgtccttaaactat 229251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 287 - 354
Target Start/End: Original strand, 24851565 - 24851632
Alignment:
Q  287 gcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    |||||||||||| |||||||||||||| |||| |||||||||| | ||||||||||||||||||||||    
T  24851565 gcagttttagtcttatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaacc 24851632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 259
Target Start/End: Original strand, 44219377 - 44219448
Alignment:
Q  188 cttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaa 259  Q
    |||||||||||||||||||||  |||||| |||||||||||||| ||||||| |||||||||||| ||||||    
T  44219377 cttaattacacttttggtcctcgtattttaaccaactcacgaaattggtcctctcttttttaaattgaacaa 44219448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 187 - 353
Target Start/End: Original strand, 18965141 - 18965306
Alignment:
Q  187 gcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgnnnnnn 285  Q
    ||||||||||| ||||| ||||   ||||| ||  ||||||||||| |||| |  || ||| |||||||||||||||||||||||||||| |||          
T  18965141 gcttaattacatttttgatcctcacattttaacttactcacgaaaacggtcttgcctctttcaaatcgaacaaaatcgtccttaaactatcatgttttt- 18965239  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaac 353  Q
     ||||||||||| ||| |||| |||||  ||||  ||||||||||| |||||||||||||||||||||    
T  18965240 -gcagttttagttctacctccttattttcaactctagaaacgcatataaatgacagttttagtccaac 18965306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 187 - 276
Target Start/End: Original strand, 23986521 - 23986610
Alignment:
Q  187 gcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 276  Q
    |||||||| |||||||||||||   |||||||||| ||||||||||||||| | ||| ||| |||||||||||||  |||| ||||||||    
T  23986521 gcttaatttcacttttggtcctcacattttgaccagctcacgaaaatggtcatgtctctttcaaatcgaacaaaactgtccctaaactat 23986610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 186 - 347
Target Start/End: Original strand, 17503974 - 17504133
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    |||||||||| ||| ||||||||   |||||||||| |||||||||||||||||  || ||| |||| ||||| || ||||| ||||||||             
T  17503974 ggcttaattatactgttggtcctcgcattttgaccatctcacgaaaatggtcctgcctctttcaaatggaacataaccgtcc-taaactatcatgttttt 17504072  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttag 347  Q
     ||||||||||||||| || |||||||  |||| |||||||| | |||||||||||||||||    
T  17504073 tgcagttttagtcctacct-cctattttcaactccagaaacgtagagaaatgacagttttag 17504133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 11153698 - 11153639
Alignment:
Q  180 ttttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    |||||||||||||||||||||||||||||  | ||||| || |||||||||| |||||||    
T  11153698 ttttttggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 11153639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 268
Target Start/End: Complemental strand, 35193848 - 35193766
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtcct 268  Q
    |||||||||||||||||||||||   |||||||  | |||||||||||||||||  || ||| ||||| ||||||| ||||||    
T  35193848 ggcttaattacacttttggtccttgcattttgataagctcacgaaaatggtcctgcctctttcaaatctaacaaaaccgtcct 35193766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 268
Target Start/End: Complemental strand, 40160640 - 40160554
Alignment:
Q  182 ttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtcct 268  Q
    |||||| ||||||||| ||||||||||   |||||||||||||||||||||| ||| |  || ||| |||| |||||||| ||||||    
T  40160640 ttttggtttaattacatttttggtccttgcattttgaccaactcacgaaaatagtcatgcctctttcaaattgaacaaaaccgtcct 40160554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 276
Target Start/End: Complemental strand, 51310051 - 51309961
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 276  Q
    ||||||||| |||||||||||||   ||||| |||| ||||||||||||||| |  || ||| |||||||||||||  |||| ||||||||    
T  51310051 ggcttaattgcacttttggtcctcgcatttttaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaacagtccctaaactat 51309961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 266
Target Start/End: Complemental strand, 10795854 - 10795777
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtc 266  Q
    ||||||||||||||| |||    ||||||| || ||||||||| ||||||| ||| ||| ||||||||||||||||||    
T  10795854 ttaattacacttttgatccccgcattttgaacagctcacgaaattggtcctctctctttcaaatcgaacaaaatcgtc 10795777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 261
Target Start/End: Complemental strand, 24336307 - 24336234
Alignment:
Q  188 cttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaa 261  Q
    |||||||||||||||| ||||   |||||||| | |||||||||||||||||  || ||| |||||||||||||    
T  24336307 cttaattacacttttgatcctcgcattttgacaagctcacgaaaatggtcctgcctctttcaaatcgaacaaaa 24336234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 186 - 279
Target Start/End: Original strand, 40160094 - 40160187
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 279  Q
    |||||||||||| ||||| |||    ||||| |||| ||||||||||| ||| |  || ||||||||||||||||| ||||| |||||||||||    
T  40160094 ggcttaattacatttttgatccccgcattttaaccagctcacgaaaatagtcatgcctcttttaaatcgaacaaaaccgtccctaaactatatg 40160187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 239
Target Start/End: Complemental strand, 20958403 - 20958351
Alignment:
Q  187 gcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    |||||||||||||||| |||||  ||||||| || ||||||||||||||||||    
T  20958403 gcttaattacacttttagtcctcgtattttggcctactcacgaaaatggtcct 20958351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 252
Target Start/End: Complemental strand, 35644106 - 35644042
Alignment:
Q  188 cttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaat 252  Q
    |||||||||||||||||||||   ||||||||||||||||||||  |||| || || ||||||||    
T  35644106 cttaattacacttttggtccttgcattttgaccaactcacgaaataggtcatacctcttttaaat 35644042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 239
Target Start/End: Complemental strand, 16691618 - 16691563
Alignment:
Q  184 ttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    |||||||||||||||||||| |||   | |||||||| ||||||||||||||||||    
T  16691618 ttggcttaattacacttttgatccctgtgttttgacctactcacgaaaatggtcct 16691563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 186 - 261
Target Start/End: Original strand, 24335761 - 24335836
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaa 261  Q
    |||||||||||||||| | ||||   |||||||||| ||||||||||||||| |  || ||| |||||||||||||    
T  24335761 ggcttaattacactttcgatccttgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaa 24335836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 22434174 - 22434232
Alignment:
Q  181 tttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    ||||||||||||||||||||||||||||  | ||||| |  |||||||||| |||||||    
T  22434174 tttttggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcct 22434232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 46193404 - 46193458
Alignment:
Q  185 tggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    ||||||||||||||||||||||||  | ||||| || |||||||||| |||||||    
T  46193404 tggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 46193458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 15523235 - 15523288
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    |||||||||||||||||||||||  | ||||| || |||||||||| |||||||    
T  15523235 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 15523288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 23494988 - 23494935
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    |||||||||||||||||||||||  | ||||| || |||||||||| |||||||    
T  23494988 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 23494935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 25938216 - 25938163
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    |||||||||||||||||||||||  | ||||| || |||||||||| |||||||    
T  25938216 ggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcct 25938163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 260
Target Start/End: Complemental strand, 31297230 - 31297161
Alignment:
Q  191 aattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaa 260  Q
    |||| |||||||||| ||  |||||  |||||||||||||| ||||| |  |||||||||||||||||||    
T  31297230 aattgcacttttggttctcgtatttaaaccaactcacgaaattggtcatgccttttttaaatcgaacaaa 31297161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 260
Target Start/End: Complemental strand, 51641374 - 51641302
Alignment:
Q  188 cttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaa 260  Q
    ||||||||||||||| |||||   |||| ||| ||||||||||| || ||||  |||||||||||| ||||||    
T  51641374 cttaattacacttttagtccttgcatttagacaaactcacgaaattgatcctgccttttttaaatcaaacaaa 51641302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 121; Significance: 6e-62; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 185 - 354
Target Start/End: Complemental strand, 25472560 - 25472391
Alignment:
Q  185 tggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnn 284  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||         
T  25472560 tggcttaattacacttttgatcctaccattttgaccaactcacgaaaatggtcttatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 25472461  T
Q  285 nngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
      ||||||||||||||||||||||||||| | || |||||||||| ||||||||||||||||||||||||    
T  25472460 ttgcagttttagtcctatctccctatttccagctccagaaacgcacagaaatgacagttttagtccaacc 25472391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 186 - 354
Target Start/End: Original strand, 5114468 - 5114635
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    |||||||||||| ||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  5114468 ggcttaattacatttttgatcctaccattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttt 5114566  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     ||||||||||||||||||||||||||| |||| ||||||| || |||||||||||||||||| |||||    
T  5114567 tgcagttttagtcctatctccctatttccaactccagaaacacacagaaatgacagttttagttcaacc 5114635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 181 - 354
Target Start/End: Complemental strand, 30251243 - 30251070
Alignment:
Q  181 tttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgn 280  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||| ||     
T  30251243 ttttaggcttaattacacttttgatcctactattttgaccaactcacaaaaattgtcatatcttttttaaatcgaacaaaatcgtccttaaactatttgt 30251144  T
Q  281 nnnnnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
          | |||||||||| |||||||||||||| |||| |||||||||| ||||||||||| ||||||||||||    
T  30251143 atttttgtagttttagtcttatctccctatttccaactccagaaacgcacagaaatgacagatttagtccaacc 30251070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 180 - 354
Target Start/End: Original strand, 31573714 - 31573892
Alignment:
Q  180 ttttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtccta-tcttttttaaatcgaacaaaatcgtccttaaactatat 278  Q
    ||||| |||||||||| |||||||||||||| |||||||||||||||||||||| |||||| | ||||||||||||||||||||||| ||||||||||||    
T  31573714 tttttaggcttaattatacttttggtcctaccattttgaccaactcacgaaaatagtcctatttttttttaaatcgaacaaaatcgttcttaaactatat 31573813  T
Q  279 g---nnnnnnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    |          ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  31573814 gttttttttttgcagttttagtcctatctccctatttccaactccagaaacgcatagaaatgacagttttagtccaacc 31573892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 189 - 354
Target Start/End: Complemental strand, 24640728 - 24640564
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnngc 288  Q
    ||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||    
T  24640728 ttaattatacttttggtcctaccattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttttgc 24640630  T
Q  289 agttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    |||||||||| |||||||||||||| |||| |  ||||||| ||||||||||||| ||||||||||    
T  24640629 agttttagtcttatctccctatttccaactccgaaaacgcacagaaatgacagttctagtccaacc 24640564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 180 - 354
Target Start/End: Complemental strand, 31073694 - 31073521
Alignment:
Q  180 ttttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 279  Q
    |||| ||||||||||||||||||||||||   |||||||||| ||||||||| ||||| || || |||||||||||||||||| |||| |||||||||||    
T  31073694 ttttatggcttaattacacttttggtccttgcattttgaccagctcacgaaattggtcatacctcttttaaatcgaacaaaattgtccctaaactatatg 31073595  T
Q  280 nnnnnnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
           ||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||    
T  31073594 ttttgt-gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaacc 31073521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 181 - 354
Target Start/End: Complemental strand, 5121020 - 5120848
Alignment:
Q  181 tttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgn 280  Q
    |||| |||||||||||||||||||||||   |||||||||||||||||||| |  ||||| || ||||||||||||||||||||||| |||||||||||     
T  5121020 ttttaggcttaattacacttttggtccttgcattttgaccaactcacgaaattattcctacctcttttaaatcgaacaaaatcgtccctaaactatatg- 5120922  T
Q  281 nnnnnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
          ||||||||||||||||||||||||||| |||| || ||||||| |||||||||||||||| |||||||    
T  5120921 ttttttgcagttttagtcctatctccctatttccaactccataaacgcacagaaatgacagttttaatccaacc 5120848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 189 - 354
Target Start/End: Original strand, 25468852 - 25469018
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-nnnnnnng 287  Q
    ||||||||||||||||||||   |||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||| |||||||||||        |    
T  25468852 ttaattacacttttggtccttacattttgaccaactcacgaaattggtcatatctcttttaaatcgaacaaaatcgtccctaaactatatgtttttcttg 25468951  T
Q  288 cagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    |||||||||||||||||||||||||  || | |||||||||| |||||||||||||||| |||||||    
T  25468952 cagttttagtcctatctccctattttaaattccagaaacgcacagaaatgacagttttattccaacc 25469018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 186 - 354
Target Start/End: Complemental strand, 29891630 - 29891459
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctat----cttttttaaatcgaacaaaatcgtccttaaactatatgnn 281  Q
    ||||||||||||||||||||||||| ||||||||||||||  |||||||||||| |     || ||||||| ||||||||||||||||||||||||||      
T  29891630 ggcttaattacacttttggtcctaccattttgaccaactcgtgaaaatggtccttttttatttatttaaattgaacaaaatcgtccttaaactatatg-t 29891532  T
Q  282 nnnnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
         ||||||||||||||||||||||||||| |||| |||||||||| |||||||| |||||||||||||||    
T  29891531 tttttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgatagttttagtccaacc 29891459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 186 - 354
Target Start/End: Complemental strand, 31574271 - 31574104
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    |||||||||||||||||||||||   |||||||||||||||||||| | ||| || || ||||||||||||||||||||||| |||||||||||          
T  31574271 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattagtcatacctcttttaaatcgaacaaaatcgtccctaaactatatg-ttttt 31574173  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     |||||||||||| |||||||||||||  |||| |||||||||| | |||||||| |||||||||||||    
T  31574172 tgcagttttagtcatatctccctattttcaactccagaaacgcacataaatgacaattttagtccaacc 31574104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 185 - 327
Target Start/End: Original strand, 31073142 - 31073290
Alignment:
Q  185 tggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatc------gtccttaaactatat 278  Q
    ||||||||||||||||||||||||   |||||||||||| || ||||||||||||||||||||||||||||||||||||      |||||||||||||||    
T  31073142 tggcttaattacacttttggtcctttaattttgaccaacacatgaaaatggtcctatcttttttaaatcgaacaaaatcgtttaagtccttaaactatat 31073241  T
Q  279 gnnnnnnngcagttttagtcctatctccctatttctaactacagaaacg 327  Q
            |||||||||||| ||||| |||||||| |||| ||||||||    
T  31073242 tattttttgcagttttagtcatatcttcctatttccaactccagaaacg 31073290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 184 - 318
Target Start/End: Original strand, 28636290 - 28636422
Alignment:
Q  184 ttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnn 283  Q
    |||||||||||||| |||||||| |  ||||||||||||||||||||| ||||| ||  | ||||||||||||||||||||| | |||||||||||        
T  28636290 ttggcttaattacatttttggtcattgtattttgaccaactcacgaaattggtcttacttcttttaaatcgaacaaaatcgttcctaaactatatg--tt 28636387  T
Q  284 nnngcagttttagtcctatctccctatttctaact 318  Q
       |||||||||||| |||||||||||||| ||||    
T  28636388 tttgcagttttagtcatatctccctatttccaact 28636422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 186 - 354
Target Start/End: Original strand, 29891080 - 29891247
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    |||||||||||||||||| ||||   |||||||| |||| |||||| || || || || ||||||| ||||||||| ||||| |||||||||||          
T  29891080 ggcttaattacacttttgttccttacattttgactaacttacgaaattgatcatacctcttttaaaccgaacaaaagcgtccctaaactatatgtttttt 29891179  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
      || ||||| | ||||||||||||||| |||| |||||||||| | ||||||||||||||||||||||    
T  29891180 a-caattttaattctatctccctatttccaactccagaaacgcacataaatgacagttttagtccaacc 29891247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 259 - 354
Target Start/End: Complemental strand, 28636669 - 28636575
Alignment:
Q  259 aaatcgtccttaaactatatgnnnnnnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    |||||||||||||||||||||       |||||||||||| |||||||||||||| |||| |||||||||| ||||||||||||||||||||||||    
T  28636669 aaatcgtccttaaactatatgtttttt-gcagttttagtcttatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaacc 28636575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 186 - 347
Target Start/End: Complemental strand, 35163733 - 35163572
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-nnnnn 284  Q
    ||||||||||||||||||||||    |||||||||| |||||||||||||| ||  || ||| ||||| ||||||||||||| |||||||||||          
T  35163733 ggcttaattacacttttggtccccgcattttgaccagctcacgaaaatggttctgcctctttcaaatcaaacaaaatcgtccctaaactatatgtttttt 35163634  T
Q  285 nngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttag 347  Q
      ||||||||||||||| || |||||||  |||| || |||| || |||||||||||||||||    
T  35163633 ttgcagttttagtcctacct-cctattttcaactccaaaaacacagagaaatgacagttttag 35163572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 22534273 - 22534217
Alignment:
Q  183 tttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  22534273 tttggcttaattacacttttggtcctcgtattttgaccaactcacgaaaatggtcct 22534217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 181 - 347
Target Start/End: Complemental strand, 32836547 - 32836383
Alignment:
Q  181 tttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgn 280  Q
    |||||||||||||||||||||| |||||   |||||||||| ||||||||||||||| |  || ||| ||||||||||||| ||| |||||||| ||||     
T  32836547 tttttggcttaattacacttttagtccttgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgttcttaaactgtatg- 32836449  T
Q  281 nnnnnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttag 347  Q
          ||||||||||||||| ||  ||||||  |||| |||||||| | |||||| ||||||||||    
T  32836448 ttttttgcagttttagtcctacct-tctattttcaacttcagaaacgaagagaaataacagttttag 32836383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 30250791 - 30250856
Alignment:
Q  287 gcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaa 352  Q
    |||| ||||||||  |||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  30250791 gcagctttagtccattctccctatttccaactacagaaacgcacagaaatgacagttttagtccaa 30250856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 258
Target Start/End: Original strand, 31242795 - 31242878
Alignment:
Q  175 taatattttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaaca 258  Q
    |||||| ||| || |||||||||||||||  |||   ||||||||||||||||||||||| ||||  |||||||||||||||||    
T  31242795 taatatatttaggtttaattacacttttgaccctcgcattttgaccaactcacgaaaatgatcctgccttttttaaatcgaaca 31242878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 237
Target Start/End: Complemental strand, 10900481 - 10900424
Alignment:
Q  180 ttttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtc 237  Q
    |||||||||||||||||||||||||||||  ||||||| || |||||||||| |||||    
T  10900481 ttttttggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtc 10900424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 268
Target Start/End: Original strand, 35163187 - 35163266
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtcct 268  Q
    |||||||||||||| |||||   |||||||||| ||||| ||||||||| | ||| ||| ||||||||||||| ||||||    
T  35163187 ttaattacacttttagtcctcgcattttgaccagctcacaaaaatggtcttgtctctttcaaatcgaacaaaaccgtcct 35163266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 240
Target Start/End: Original strand, 30250717 - 30250775
Alignment:
Q  182 ttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtccta 240  Q
    |||| ||||||||||| ||||||||||   |||||||||||||||||||| ||||||||    
T  30250717 tttttgcttaattacaattttggtccttgcattttgaccaactcacgaaattggtccta 30250775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 28472637 - 28472690
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    |||||||||||||||||||||||  | ||||| ||||||||||||| |||||||    
T  28472637 ggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcct 28472690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 29859826 - 29859879
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    |||||||||||||||||||||||  | ||||| ||||||||||||| |||||||    
T  29859826 ggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcct 29859879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 3835268 - 3835188
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtcctt 269  Q
    |||||||||||||||||||   | |||||||| ||||||||||||||||||  || ||| |||  ||||||||| ||||||    
T  3835268 ttaattacacttttggtccatgtgttttgacctactcacgaaaatggtcctgcctctttaaaacagaacaaaattgtcctt 3835188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 835778 - 835695
Alignment:
Q  179 attttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaat 262  Q
    |||||| ||||||||| |||||||||||||   ||||| | || || ||||||||||||||  || ||| ||||||||||||||    
T  835778 atttttaggcttaattgcacttttggtcctcgcatttttagcagcttacgaaaatggtcctgcctctttcaaatcgaacaaaat 835695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 186 - 261
Target Start/End: Complemental strand, 11445532 - 11445457
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaa 261  Q
    |||||||||||||||||||||||  | ||||| || |||||||||| |||||||  |||||| |||  ||||||||    
T  11445532 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaa 11445457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 239
Target Start/End: Complemental strand, 18257684 - 18257629
Alignment:
Q  184 ttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    |||||||||||| ||||||||||||  | |||||||| |||||||||| |||||||    
T  18257684 ttggcttaattatacttttggtcctcgtgttttgacctactcacgaaactggtcct 18257629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 188 - 259
Target Start/End: Complemental strand, 18297733 - 18297662
Alignment:
Q  188 cttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaa 259  Q
    ||||||||||||||| ||| |   ||||| |||||||||||||| ||||| | |||||||||||| ||||||    
T  18297733 cttaattacacttttagtcttcgaattttaaccaactcacgaaattggtcatctcttttttaaattgaacaa 18297662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 20741100 - 20741183
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtcctt 269  Q
    |||||||||||||||||||||||  | ||||| || |||||||||| |||||||  | |||| |||  ||||||||| ||||||    
T  20741100 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtcctt 20741183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 186 - 261
Target Start/End: Original strand, 23073999 - 23074074
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaa 261  Q
    |||||||||||||||||||||||  | ||||| || |||||||||| |||||||  | |||| |||| ||||||||    
T  23073999 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaa 23074074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 189 - 268
Target Start/End: Original strand, 32836010 - 32836089
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtcct 268  Q
    ||||||||||||||| ||||   |||||||||| ||||| |||| ||||||  || ||| ||||||||||||| ||||||    
T  32836010 ttaattacacttttgatccttgcattttgaccagctcacaaaaacggtcctgcctctttcaaatcgaacaaaaccgtcct 32836089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 276
Target Start/End: Original strand, 835394 - 835484
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 276  Q
    ||||||||| |||||||||||||   ||||| | || ||||||||||||||| |  || ||| |||||||||||||  |||| ||||||||    
T  835394 ggcttaattgcacttttggtcctcacatttttagcagctcacgaaaatggtcttgcctctttcaaatcgaacaaaactgtccctaaactat 835484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 237
Target Start/End: Original strand, 4811370 - 4811423
Alignment:
Q  184 ttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtc 237  Q
    |||||||||||||||||||||||| | |||||||  | |||||||||| |||||    
T  4811370 ttggcttaattacacttttggtcccagtattttggtctactcacgaaactggtc 4811423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 11277131 - 11277074
Alignment:
Q  182 ttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    |||||||||||||||||||||||||||  | ||||| |  |||||||||| |||||||    
T  11277131 ttttggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcct 11277074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 12935157 - 12935210
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    |||||||||||||||||||||||  | ||||| || |||||||||| |||||||    
T  12935157 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 12935210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 22219898 - 22219845
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    |||||||||||||||||||||||  | ||||| || |||||||||| |||||||    
T  22219898 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 22219845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 261
Target Start/End: Complemental strand, 33096163 - 33096082
Alignment:
Q  180 ttttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaa 261  Q
    ||||||||||||||| |||||||| || |   ||||| |||| |||| |||||||||| | ||| ||| |||||||||||||    
T  33096163 ttttttggcttaattgcacttttgttcttcgcatttttaccagctcatgaaaatggtcatgtctctttcaaatcgaacaaaa 33096082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 261
Target Start/End: Original strand, 18504922 - 18504994
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaa 261  Q
    ||||||||||||||||||||  | ||||| || |||||||||| |||||||  |||||| |||  ||||||||    
T  18504922 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaa 18504994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 276
Target Start/End: Original strand, 33095716 - 33095804
Alignment:
Q  188 cttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 276  Q
    ||||||| |||||||||||||   ||||| | || ||| |||||||||||  | || ||| ||||||||||||| ||||| ||||||||    
T  33095716 cttaattgcacttttggtcctcgcatttttatcagctcgcgaaaatggtctcacctctttcaaatcgaacaaaaccgtccctaaactat 33095804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 121; Significance: 6e-62; HSPs: 84)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 184 - 353
Target Start/End: Complemental strand, 51828506 - 51828337
Alignment:
Q  184 ttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnn 283  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||        
T  51828506 ttggcttaattacacttttggtcctaccactttgaccaactcacgaaaatggtcatatattttttaaatcgaacaaaattgtccttaaactatatgtttt 51828407  T
Q  284 nnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaac 353  Q
       ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  51828406 tttgcagttttagtcctatctccctatttccaactccagaaacgcatagaaatgacagttttagtccaac 51828337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 186 - 354
Target Start/End: Original strand, 47431696 - 47431864
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||| ||||||||||||          
T  47431696 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtctttaaactatatgtttttt 47431795  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  47431796 tgcagttttagtcctatctccctatttctaactccagaaacgcacagaaatgacagttttagtccaacc 47431864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 189 - 354
Target Start/End: Complemental strand, 51473399 - 51473234
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnngc 288  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||    
T  51473399 ttaattacacttttgatcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttgc 51473300  T
Q  289 agttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    ||||||||||||||||||||||||| |||| || ||||||| | ||||||||||||||||||||||    
T  51473299 agttttagtcctatctccctatttccaactccaaaaacgcacataaatgacagttttagtccaacc 51473234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 186 - 354
Target Start/End: Original strand, 41998229 - 41998397
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  41998229 ggcttaattacacttttggtcctaccattttgaccaactcgcgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 41998328  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     |||||||||||| |||||||||||||| |||| || ||||| | ||||||||||||||||||||||||    
T  41998329 tgcagttttagtcatatctccctatttccaactccataaacgaacagaaatgacagttttagtccaacc 41998397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 186 - 354
Target Start/End: Original strand, 2051295 - 2051466
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg---nnn 282  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||          
T  2051295 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgttcttaaactatatgtttttt 2051394  T
Q  283 nnnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
        ||||||||| |||||| ||||||||||||||| |||||||||| | ||||||||||||||||||||||    
T  2051395 ttttgcagttttattcctatttccctatttctaactccagaaacgcacaaaaatgacagttttagtccaacc 2051466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 184 - 354
Target Start/End: Original strand, 43678293 - 43678462
Alignment:
Q  184 ttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnn 283  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||        
T  43678293 ttggcttaattacacttttggtcctaccattttgaccaactcacgaacatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttt 43678391  T
Q  284 nnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
       |||||||||||| |||||||||||||| |||| ||||| |||| | ||||||||||||||||||||||    
T  43678392 tttgcagttttagtcttatctccctatttccaactccagaagcgcacataaatgacagttttagtccaacc 43678462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 189 - 354
Target Start/End: Original strand, 49951549 - 49951713
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnngc 288  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||    
T  49951549 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttttgc 49951647  T
Q  289 agttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    | ||||||||||||||||||||||| |||| || ||||||| | |||| |||||||||||||||||    
T  49951648 aattttagtcctatctccctatttccaactccataaacgcacataaataacagttttagtccaacc 49951713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 186 - 354
Target Start/End: Original strand, 38535309 - 38535476
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  38535309 ggcttaattacacttttggtcctaccattttgaccaactcaggaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttt 38535407  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     ||||||| ||||||||||||||||||| |||| || ||||||| | |||||||||||||||| |||||    
T  38535408 tgcagtttcagtcctatctccctatttccaactccaaaaacgcacataaatgacagttttagttcaacc 38535476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 187 - 354
Target Start/End: Complemental strand, 46013968 - 46013801
Alignment:
Q  187 gcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnn 286  Q
    ||||||||||||||||||| |||  |||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||           
T  46013968 gcttaattacacttttggtactatcattttgaccaactcccaaaaatggttctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttt 46013869  T
Q  287 gcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    ||||||||||||||||||||||||||| |||| |||||||||| | ||||||||||||||||||||||    
T  46013868 gcagttttagtcctatctccctatttccaactccagaaacgcacataaatgacagttttagtccaacc 46013801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 190 - 354
Target Start/End: Original strand, 55389609 - 55389772
Alignment:
Q  190 taattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnngca 289  Q
    ||||||||||||||||||| | |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       |||    
T  55389609 taattacacttttggtcctcccatttcgaccaactcacgaaaatggtcctaccttttttaaatcgaacaaaatcgtccttaaactatatg-ttttttgca 55389707  T
Q  290 gttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    |||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||| |||||    
T  55389708 gttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagttcaacc 55389772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 183 - 354
Target Start/End: Complemental strand, 51829089 - 51828919
Alignment:
Q  183 tttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnn 282  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||       
T  51829089 tttggcttaattacacttttggtcatactattttgatcaactcacgaaaatggtcgtatcttttttaattcaaacaaaatcgtccttaaactatatg-tt 51828991  T
Q  283 nnnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
        ||||||||||||||||||||||||||| |||| || ||||||| | ||||||||||||||||||||||    
T  51828990 ttttgcagttttagtcctatctccctatttccaacttcataaacgcacataaatgacagttttagtccaacc 51828919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 188 - 354
Target Start/End: Complemental strand, 32730933 - 32730768
Alignment:
Q  188 cttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnng 287  Q
    ||||||||||||||||||| ||| ||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||       |    
T  32730933 cttaattacacttttggtcataccattttaaccaactcaagaaaatggtcctatcttttttaaattgaacaaaatcgtccttaaactatatg-ttttttg 32730835  T
Q  288 cagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    |||||||| ||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||    
T  32730834 cagttttaatcctatctccctatttcaaactccagaaacgcacagaaatgacagttttagtccaacc 32730768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 180 - 353
Target Start/End: Complemental strand, 40839204 - 40839032
Alignment:
Q  180 ttttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 279  Q
    |||||||| ||||||||||||||||||||   |||||||| ||||||||||||||||| || || ||||||||||||||||||||||| |||||||||||    
T  40839204 ttttttggtttaattacacttttggtcctcacattttgacaaactcacgaaaatggtcttacctcttttaaatcgaacaaaatcgtccctaaactatatg 40839105  T
Q  280 nnnnnnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaac 353  Q
           |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  40839104 -ttttttgcagttttagtcctatctccctatttctaactccagaaacgcacagaaatgacagttttagtccaac 40839032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 185 - 354
Target Start/End: Complemental strand, 50662959 - 50662791
Alignment:
Q  185 tggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnn 284  Q
    ||||||||||| |||||||||||||| |||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||         
T  50662959 tggcttaattatacttttggtcctaccattttgacaaactcacgaaaatagtcatatcttttttaaatcgaacaaaatcgtccttaaactatatg-tttt 50662861  T
Q  285 nngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
      ||||||||||||||| ||||||||||  |||| |||||||||| ||||||||||||||||||||||||    
T  50662860 ttgcagttttagtcctagctccctattttcaactccagaaacgcacagaaatgacagttttagtccaacc 50662791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 189 - 354
Target Start/End: Complemental strand, 44677015 - 44676851
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnngc 288  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||       ||    
T  44677015 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttttgc 44676917  T
Q  289 agttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    | ||||||||||||||| ||||||  |||| |||||||||| | ||||||||||||||||| ||||    
T  44676916 aattttagtcctatctctctattttcaactccagaaacgcacataaatgacagttttagtctaacc 44676851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 186 - 354
Target Start/End: Complemental strand, 16701338 - 16701168
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg--nnnn 283  Q
    |||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||          
T  16701338 ggcttaattacatttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaattcgaacaaaatcgtccttaaactatatgtttttt 16701239  T
Q  284 nnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
       |||||||||||| |||||||||||||| |||| || |||||||| ||||| |||||||||||||||||    
T  16701238 tttgcagttttagtcatatctccctatttccaactccataaacgcatcgaaattacagttttagtccaacc 16701168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 185 - 354
Target Start/End: Original strand, 40275092 - 40275262
Alignment:
Q  185 tggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-nnnn 283  Q
    ||||||||||||||||||||||||   ||||||||||||||||||||||||||||| || |||||||||||||||||| |||| |||||| ||||         
T  40275092 tggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaattgtccctaaactctatgttttt 40275191  T
Q  284 nnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
       |||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||    
T  40275192 tttgcagttttagtcctatctccatatttctaactccagaaacgcacagaaatgacagttttagtccaacc 40275262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 186 - 325
Target Start/End: Complemental strand, 49720907 - 49720769
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||          
T  49720907 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatg-ttttt 49720809  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaa 325  Q
     |||||||||||| |||||||||||||| |||| ||||||    
T  49720808 tgcagttttagtcttatctccctatttccaactccagaaa 49720769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 179 - 354
Target Start/End: Original strand, 52375320 - 52375494
Alignment:
Q  179 attttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatat 278  Q
    ||||||||||||||||||||||||||||||   ||||| ||||| |||||||||||||| || || |||||||| |||||||||||||| ||||||||||    
T  52375320 attttttggcttaattacacttttggtcctcacattttaaccaattcacgaaaatggtcatacctcttttaaattgaacaaaatcgtccctaaactatat 52375419  T
Q  279 gnnnnnnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    |       ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  52375420 g-ttttttgcagttttagttctatctccctatttctaactccagaaacgcatagaaatgacagttttagtctaacc 52375494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 188 - 354
Target Start/End: Complemental strand, 52237361 - 52237196
Alignment:
Q  188 cttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnng 287  Q
    |||||||||||||||||||||   ||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||| ||||||       |    
T  52237361 cttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaattatatg-ttttttg 52237263  T
Q  288 cagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    ||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||| ||||    
T  52237262 cagttttagtcctatctccctatttctaactccggaaacgcacagaaatgacagttttagtcaaacc 52237196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 186 - 354
Target Start/End: Original strand, 51828539 - 51828707
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    |||||||||||||||||||||||   ||||||||||| | |||||| ||||| || || ||||||||||||||||||||||| |||||||||||          
T  51828539 ggcttaattacacttttggtccttgcattttgaccaaattacgaaattggtcttacctcttttaaatcgaacaaaatcgtccgtaaactatatgtttttt 51828638  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     ||||||||||||||||||||||||||| |||| |||||||||| | ||||||||||||||||||||||    
T  51828639 tgcagttttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaacc 51828707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 186 - 354
Target Start/End: Complemental strand, 330382 - 330215
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    ||||||||||||| |||||||||   ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||          
T  330382 ggcttaattacacatttggtcctcgcattttgaccaactcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtccctaaactatatg-ttttt 330284  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     |||||||||||| |||||||||||||| ||||  ||||||||| |||||||||||||||| |||||||    
T  330283 tgcagttttagtcatatctccctatttccaactctagaaacgcacagaaatgacagttttaatccaacc 330215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 188 - 351
Target Start/End: Original strand, 30513724 - 30513886
Alignment:
Q  188 cttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnng 287  Q
    |||||||||| ||||||||||   |||||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||       |    
T  30513724 cttaattacatttttggtccttgcattttgacaaactcacgaaaatggtcctatcttttttaaatcgaataaaatcgt-cttaaactatatgtttttctg 30513822  T
Q  288 cagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtcca 351  Q
    ||||||||||| ||||||| |||||| |||| |||||||||| |||||||||||||||||||||    
T  30513823 cagttttagtcatatctccatatttcgaacttcagaaacgcacagaaatgacagttttagtcca 30513886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 186 - 354
Target Start/End: Original strand, 51827957 - 51828124
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    |||||||||||||||||||||||   |||||||||||||||||||| |||||||| || ||||||||||||||||||||||| |||||||||||          
T  51827957 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctagctcttttaaatcgaacaaaatcgtccctaaactatatg-ttttt 51828055  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     ||| ||||||||||||||||||||||  |||| |||||||||| | ||||||||||||||||||||||    
T  51828056 tgcatttttagtcctatctccctattttcaactccagaaacgcacataaatgacagttttagtccaacc 51828124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 186 - 354
Target Start/End: Complemental strand, 52375877 - 52375710
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    |||||||||||||||||||||||   ||||||||||||||||||||||||||||| || |||||||| |||||||||||||| |||||||||||          
T  52375877 ggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaattgaacaaaatcgtccataaactatatg-ttttt 52375779  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     |||||||||||| |||  ||||||||| |||| |||||||||| ||||||||||||||||||||||||    
T  52375778 tgcagttttagtcatattcccctatttccaactccagaaacgcacagaaatgacagttttagtccaacc 52375710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 189 - 348
Target Start/End: Original strand, 22370599 - 22370758
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnngc 288  Q
    ||||||||||||||||||||   ||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| |||||||||||       ||    
T  22370599 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctaccttttttaaaccaaacaaaatcgtccctaaactatatgtttttttgc 22370698  T
Q  289 agttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagt 348  Q
    |||||||||||||||||| ||| || |||| |||||||||| |||||| |||||||||||    
T  22370699 agttttagtcctatctccttatctccaactccagaaacgcacagaaataacagttttagt 22370758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 186 - 354
Target Start/End: Original strand, 49720371 - 49720538
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    |||||||||||||||||| ||||   |||||||||||||||||||| |||||||| || ||||||||||||||||||||||| |||| |||| |          
T  49720371 ggcttaattacacttttgatccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaagtatacg-ttttt 49720469  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     |||||||||||||||||||| ||||||||||| |||||||||| | ||||||||||||||||||||||    
T  49720470 tgcagttttagtcctatctccttatttctaactccagaaacgcacataaatgacagttttagtccaacc 49720538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 183 - 354
Target Start/End: Complemental strand, 40275642 - 40275473
Alignment:
Q  183 tttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnn 282  Q
    ||||||||||||||||||||||||||   ||||||||||||||||| ||||||||||| || ||||||||||||||||||||||  |||||||||||       
T  40275642 tttggcttaattacacttttggtcctcacattttgaccaactcacg-aaatggtcctacctcttttaaatcgaacaaaatcgtctctaaactatatg-tt 40275545  T
Q  283 nnnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
        |||||||||||| |||| ||||||||| |||| |||||||||| | ||||||||||||||||||||||    
T  40275544 ttttgcagttttagtcatatccccctatttccaactccagaaacgcacaaaaatgacagttttagtccaacc 40275473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 176 - 354
Target Start/End: Complemental strand, 55390154 - 55389976
Alignment:
Q  176 aatatttttt-ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaact 274  Q
    |||||||||| |||||||||||||||||||||||   ||||| ||||| ||||||||||||||||| |||||||||||| ||||||||||||  ||||||    
T  55390154 aatattttttaggcttaattacacttttggtcctcgcattttaaccaattcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtcactaaact 55390055  T
Q  275 atatgnnnnnnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    |||||       | ||||||||||||| ||||||||||| |||| || ||||||| ||||||||||||||||||||||||    
T  55390054 atatg-ttttttgtagttttagtcctacctccctatttccaactccataaacgcacagaaatgacagttttagtccaacc 55389976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 180 - 318
Target Start/End: Original strand, 329840 - 329977
Alignment:
Q  180 ttttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 279  Q
    ||||||||| |||||||||||||||| || | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  329840 ttttttggcataattacacttttggttcttccattttgaccaactcacgaaaatggtcctaacttttttaaatcgaacaaaatcgtccttaaactatatg 329939  T
Q  280 nnnnnnngcagttttagtcctatctccctatttctaact 318  Q
           |||||||||||||||||||||| |||| ||||    
T  329940 -ttttttgcagttttagtcctatctccctgtttccaact 329977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 186 - 354
Target Start/End: Original strand, 25534890 - 25535058
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgt-ccttaaactatatgnnnnn 284  Q
    |||||||||||||||||||||||   ||||||||||| ||| ||||||||||||| || ||||||||||||||||||||| || |||| ||||||         
T  25534890 ggcttaattacacttttggtcctcgcattttgaccaattcatgaaaatggtcctacctcttttaaatcgaacaaaatcgtcccctaaattatatg-tttt 25534988  T
Q  285 nngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
      ||||||||||||||||||||||||||| |||| |||||||||| | ||||||||||||||||||||||    
T  25534989 ttgcagttttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaacc 25535058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 189 - 354
Target Start/End: Original strand, 40838655 - 40838819
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnngc 288  Q
    ||||||||||||||| ||||   |||||||||||||||||||||||||| || || ||||||||| ||||||||||||| |||||||||||       ||    
T  40838655 ttaattacacttttgatcctcgcattttgaccaactcacgaaaatggtcatacctcttttaaatcaaacaaaatcgtccataaactatatg-ttttttgc 40838753  T
Q  289 agttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    |||||||||| |||| ||||||||| |||| |||||||||| ||||||||||||||||||||||||    
T  40838754 agttttagtcatatccccctatttccaactccagaaacgcacagaaatgacagttttagtccaacc 40838819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 182 - 354
Target Start/End: Complemental strand, 49952096 - 49951925
Alignment:
Q  182 ttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnn 281  Q
    |||||||||||||||| ||||||||||   |||||||||||||||||||| ||||| || || |||||||||||||||||||||| |||||||| |||      
T  49952096 ttttggcttaattacatttttggtccttgcattttgaccaactcacgaaattggtcttacctcttttaaatcgaacaaaatcgtcattaaactacatg-t 49951998  T
Q  282 nnnnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
         |||||||||||| |||||||||||||  |||| |||||||||| | ||||||||||||||||||||||    
T  49951997 tttttgcagttttagtcatatctccctattttcaactccagaaacgcacataaatgacagttttagtccaacc 49951925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 180 - 279
Target Start/End: Original strand, 14654193 - 14654292
Alignment:
Q  180 ttttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 279  Q
    ||||| |||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  14654193 tttttaggcttaattacacttttgatactaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtctttaaactatatg 14654292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 186 - 354
Target Start/End: Original strand, 34104638 - 34104804
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    ||||| ||||||||||| || |||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||          
T  34104638 ggcttcattacactttttgttctaccattttgaccaactcacgaaaatggttctatcttttttaaattgaacaaaatcgtcattaaactatatg-ttttt 34104736  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     |||||||||||| ||||| |||||||| | || |||||||||| | |||||||| |||||||||||||    
T  34104737 tgcagttttagtcatatct-cctatttccagctccagaaacgcacaaaaatgacatttttagtccaacc 34104804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 186 - 354
Target Start/End: Complemental strand, 14654735 - 14654570
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    |||||||||||||||||||||||   |||||||||||||||||||| |||  ||| || ||||||||||||||||||||||| |||||||| |           
T  14654735 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggctctacctcttttaaatcgaacaaaatcgtccgtaaactatgt---tttt 14654639  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     |||||||||||||||||||| |||||| |||| |||||||||| | |||||||||||||||| |||||    
T  14654638 tgcagttttagtcctatctccttatttccaactccagaaacgcacataaatgacagttttagttcaacc 14654570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 182 - 351
Target Start/End: Original strand, 44676468 - 44676636
Alignment:
Q  182 ttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnn 281  Q
    |||||||||||||||||||||||||||   |||||||| |||||| |||| || || || || ||||||||||||||||| ||||| |||||||||||      
T  44676468 ttttggcttaattacacttttggtccttgcattttgacaaactcatgaaattgatcatacctcttttaaatcgaacaaaaccgtccctaaactatatg-t 44676566  T
Q  282 nnnnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtcca 351  Q
         |||| |||||||||||||||||||||| ||||  ||||||||| |||||||||||||||||||||    
T  44676567 tttttgcagctttagtcctatctccctatttccaactcaagaaacgcacagaaatgacagttttagtcca 44676636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 192 - 354
Target Start/End: Complemental strand, 34105190 - 34105027
Alignment:
Q  192 attacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnn-gcag 290  Q
    |||||||||||||||||   ||||||||||||| |||||  |||||||  || ||||||||||||||||||||||| |||||||||||        ||||    
T  34105190 attacacttttggtccttgcattttgaccaacttacgaagttggtcctccctcttttaaatcgaacaaaatcgtccctaaactatatgttttttttgcag 34105091  T
Q  291 ttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    ||||||||| |||||| |||||| |||| |||||||||| ||||||||||||||||||||||||    
T  34105090 ttttagtcccatctccttatttccaacttcagaaacgcacagaaatgacagttttagtccaacc 34105027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 186 - 354
Target Start/End: Complemental strand, 38535841 - 38535674
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    |||||||||| |||||||||||    ||||||||||||| |||||| | |||| |||| |||||||||||| |||||||||| |||||||||||          
T  38535841 ggcttaattatacttttggtccgtgcattttgaccaacttacgaaattagtccgatctcttttaaatcgaataaaatcgtccctaaactatatgtttttt 38535742  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     ||||||||||||||||||||||||||| |||| |||||||||| | |||| |||||||||||||||||    
T  38535741 -gcagttttagtcctatctccctatttccaactccagaaacgcacataaattacagttttagtccaacc 38535674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 186 - 354
Target Start/End: Original strand, 46013422 - 46013589
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    |||||||||||||||||| ||||   |||||||||||||||||||| ||||| || || ||||||||||||||||||||||| |||| ||||||          
T  46013422 ggcttaattacacttttgatccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaagtatatg-ttttt 46013520  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     |||||||||||| |||||||||||||  |||| |||||||||| | ||||||| ||||||||||||||    
T  46013521 tgcagttttagtcatatctccctattttcaactccagaaacgcacataaatgacggttttagtccaacc 46013589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 188 - 352
Target Start/End: Original strand, 52236818 - 52236981
Alignment:
Q  188 cttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnng 287  Q
    ||||||||||||||| |||||   ||||||| ||| |||||||||||||| || || ||||||||||||||||||||||| |||||||||||       |    
T  52236818 cttaattacacttttagtcctcgcattttgaacaattcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatg-ttttttg 52236916  T
Q  288 cagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaa 352  Q
    ||||||||||| |||| ||||||||  |||| |||||||||| ||||||||||||||||||||||    
T  52236917 cagttttagtcatatccccctattttcaactccagaaacgcacagaaatgacagttttagtccaa 52236981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 186 - 354
Target Start/End: Original strand, 51472855 - 51473022
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    |||||||||| ||||||||||||   ||||||||||||||| |||| |  ||||| || ||||||||| |||||||| |||| |||| ||||||          
T  51472855 ggcttaattatacttttggtccttgcattttgaccaactcatgaaatttttcctacctcttttaaatcaaacaaaattgtccctaaagtatatgtttttt 51472954  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     ||||||||||||||||||||||||||| |||| || ||||||| ||||||||||||||||||||||||    
T  51472955 -gcagttttagtcctatctccctatttccaactccataaacgcacagaaatgacagttttagtccaacc 51473022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 186 - 354
Target Start/End: Original strand, 2044271 - 2044438
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    ||||||||| |||||||||| ||   ||||||||||||||| |||||||||| || || ||||||||||||||||||||||| |||| ||||||          
T  2044271 ggcttaatttcacttttggttctcgcattttgaccaactcatgaaaatggtcatacctcttttaaatcgaacaaaatcgtccataaattatatgtttttt 2044370  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     | |||||||||| |||||||||||||| ||||  ||||||||| | |||| |||||||||||||||||    
T  2044371 gg-agttttagtcatatctccctatttccaactcaagaaacgcacataaataacagttttagtccaacc 2044438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 185 - 354
Target Start/End: Complemental strand, 43678831 - 43678663
Alignment:
Q  185 tggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnn 284  Q
    ||||||||||||||||||||||||   ||||||| |||||||||||  |||||| | || ||||||||||||||||||||||| |||||||||||         
T  43678831 tggcttaattacacttttggtccttgcattttgatcaactcacgaacttggtccaacctcttttaaatcgaacaaaatcgtccataaactatatg-tttt 43678733  T
Q  285 nngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
      ||||||| |||| ||||| |||||||| ||||  ||||||||| | |||||||||||||||| |||||    
T  43678732 ttgcagtttcagtcatatcttcctatttccaactctagaaacgcacataaatgacagttttagttcaacc 43678663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 189 - 348
Target Start/End: Original strand, 32730392 - 32730550
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnngc 288  Q
    ||||||||||||||||||||   ||||||||||||||  |||| |||||||| || |||||||| |||||||||||||| |||||||||||       ||    
T  32730392 ttaattacacttttggtccttgcattttgaccaactcttgaaattggtcctacctcttttaaattgaacaaaatcgtccctaaactatatg-ttttttgc 32730490  T
Q  289 agttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagt 348  Q
    ||||||| || |||||||||||||| ||||  ||||||||| | ||||||||||||||||    
T  32730491 agttttaatcgtatctccctatttccaactctagaaacgcacataaatgacagttttagt 32730550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 189 - 313
Target Start/End: Original strand, 16689361 - 16689484
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnngc 288  Q
    ||||||||| |||||||||||  |||||||||||||||||||| |||||||| || ||||||||||||||||||||||| |||| ||||||       ||    
T  16689361 ttaattacagttttggtcctagcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccataaaatatatg-ttttttgc 16689459  T
Q  289 agttttagtcctatctccctatttc 313  Q
    ||||||||||||||| |||||||||    
T  16689460 agttttagtcctatcaccctatttc 16689484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 186 - 312
Target Start/End: Complemental strand, 41998774 - 41998650
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    |||||||||||||||||||||||   ||||||||||||| |||||| |||||||| || ||||||||||||||||||||||| | |||||||||          
T  41998774 ggcttaattacacttttggtccttgcattttgaccaacttacgaaattggtcctacctcttttaaatcgaacaaaatcgtccct-aactatatgtttttt 41998676  T
Q  286 ngcagttttagtcctatctccctattt 312  Q
     ||||||||||||||| ||||||||||    
T  41998675 tgcagttttagtccta-ctccctattt 41998650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 187 - 354
Target Start/End: Complemental strand, 43222935 - 43222768
Alignment:
Q  187 gcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnn 286  Q
    ||||||| ||||||||||||||   |||||||| | | ||||||||||||| |  || ||||||||||||||||||||||| |||||| ||||           
T  43222935 gcttaatcacacttttggtcctcgcattttgacaagcgcacgaaaatggtcatgcctcttttaaatcgaacaaaatcgtccctaaactttatgttttttt 43222836  T
Q  287 gcagttttagtcctatctccctatttct-aactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    ||||||||||||| | | |||||||| | |||| |||||||||| | ||||||||||||||||||||||    
T  43222835 gcagttttagtccca-ccccctatttttcaactccagaaacgcacaaaaatgacagttttagtccaacc 43222768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 180 - 354
Target Start/End: Original strand, 43222384 - 43222557
Alignment:
Q  180 ttttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 279  Q
    |||||||||||||||||  |||||||| |   |||||||||||||||||||||| ||  | ||| ||||||||||||||||||||||| |||||||||||    
T  43222384 ttttttggcttaattacgtttttggtcatcacattttgaccaactcacgaaaatagttatgtctcttttaaatcgaacaaaatcgtccctaaactatatg 43222483  T
Q  280 nnnnnnngcagttttagtcctatctccctatttct-aactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
           ||| ||||| ||||| | |||||||| | |||| |||||||| | | ||||||||||||||||||||||    
T  43222484 -ttttttgcatttttaatccta-ccccctatttttcaactccagaaacgtacaaaaatgacagttttagtccaacc 43222557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 199 - 271
Target Start/End: Complemental strand, 39010554 - 39010482
Alignment:
Q  199 ttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaa 271  Q
    ||||| |||| | |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  39010554 ttttgatcctgccattttgaccagctcacgaaaatgatcctatcttttttaaatcgaacaaaatcgtccttaa 39010482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 188 - 347
Target Start/End: Complemental strand, 36701640 - 36701482
Alignment:
Q  188 cttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnng 287  Q
    |||||||||||||||||||||   |||||||||| ||||||||||||||| | ||| ||| ||||||||||||||| ||| ||||||||          |    
T  36701640 cttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcatgtctctttcaaatcgaacaaaatcatccctaaactatcatgttttttg 36701541  T
Q  288 cagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttag 347  Q
    ||||||||||| || || |||||||  |||| ||||||| |||||||||| |||||||||    
T  36701540 cagttttagtcatacct-cctattttcaactccagaaacacatagaaatggcagttttag 36701482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 186 - 277
Target Start/End: Complemental strand, 33412700 - 33412609
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactata 277  Q
    |||||||||||||||||||||||   ||||||| || |||||||||||||| || ||| |||  |||||||||||||||||| |||||||||    
T  33412700 ggcttaattacacttttggtcctcgcattttgatcagctcacgaaaatggttctgtctctttcgaatcgaacaaaatcgtccctaaactata 33412609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 186 - 276
Target Start/End: Original strand, 36701106 - 36701196
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 276  Q
    |||||||||||||||||||||||   ||||||| ||||||||||||||| || |  || ||| ||||||||||||||||||| ||||||||    
T  36701106 ggcttaattacacttttggtcctcgcattttgatcaactcacgaaaatgatcatgcctctttcaaatcgaacaaaatcgtccataaactat 36701196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 186 - 354
Target Start/End: Original strand, 39010075 - 39010241
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    |||||||||||| ||||||||||   |||||||||||||||| ||| || || || || |||||||||||||||||| || |||||||| ||||          
T  39010075 ggcttaattacatttttggtccttgcattttgaccaactcacaaaattgctcatacctcttttaaatcgaacaaaattgttcttaaactgtatg-ttttt 39010173  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     ||||||||||||  ||||||||||||  |||| || ||| ||| | |||||| |||||||||||||||    
T  39010174 tgcagttttagtcacatctccctattttcaactccataaa-gcacataaatgatagttttagtccaacc 39010241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 183 - 347
Target Start/End: Original strand, 55192115 - 55192277
Alignment:
Q  183 tttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnn 282  Q
    |||||||||||||||||||| ||||    |||||||||| |||||||||||||||    || ||| ||||| ||||||| ||||| |||||||||||       
T  55192115 tttggcttaattacacttttagtccccgcattttgaccagctcacgaaaatggtctcgcctctttcaaatcaaacaaaaccgtccataaactatatg-tt 55192213  T
Q  283 nnnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttag 347  Q
        | ||||||||||||| || |||||||  |||| |||||||||| |||||||||||||||||    
T  55192214 ttttgtagttttagtcctacct-cctattttcaactccagaaacgcagagaaatgacagttttag 55192277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 347
Target Start/End: Original strand, 37075687 - 37075848
Alignment:
Q  187 gcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg--nnnnn 284  Q
    ||||||||||||||||||||     ||||||||||||||||||||||||||||  || ||| ||||| ||||||  ||||| |||||||||||           
T  37075687 gcttaattacacttttggtctccgcattttgaccaactcacgaaaatggtcctgcctctttcaaatcaaacaaacccgtccctaaactatatgttttttt 37075786  T
Q  285 nngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttag 347  Q
      ||||||||||||||| || | |||||  |||| |||||||||| ||||||||| |||||||    
T  37075787 ttgcagttttagtcctacct-cttattttcaactccagaaacgcagagaaatgaccgttttag 37075848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 186 - 279
Target Start/End: Original strand, 49407796 - 49407889
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 279  Q
    |||||||||||||||||||||||   |||||||||| ||||||||||||||| |  || ||| |||| |||||||| ||||| |||||| ||||    
T  49407796 ggcttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatagaacaaaaccgtccctaaactttatg 49407889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 186 - 279
Target Start/End: Complemental strand, 50901073 - 50900980
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 279  Q
    |||||||||||||||||||||||   |||||||||| ||||| ||||||| |||  || ||  ||||||||||||| ||||| |||||||||||    
T  50901073 ggcttaattacacttttggtcctcgcattttgaccagctcacaaaaatggccctgcctcttacaaatcgaacaaaaccgtccctaaactatatg 50900980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 347
Target Start/End: Complemental strand, 27200237 - 27200078
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    |||||||||||||||||||||||   |||||||||| |||||||||||||| ||  || ||| ||||||||||| | ||||| ||||||||             
T  27200237 ggcttaattacacttttggtccttgcattttgaccagctcacgaaaatggttctgcctctttcaaatcgaacaataccgtcc-taaactatcatgttttt 27200139  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttag 347  Q
     |||||||||||| || || |||||||  |||| |||||||||| ||||||||||| |||||    
T  27200138 tgcagttttagtcatacct-cctattttcaactccagaaacgcagagaaatgacaggtttag 27200078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 189 - 279
Target Start/End: Original strand, 27199705 - 27199795
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 279  Q
    ||||||||| ||||||||||   |||||||||| ||||||||||||||| |  || ||| ||||||||||||| ||||  |||||||||||    
T  27199705 ttaattacatttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtcactaaactatatg 27199795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 187 - 347
Target Start/End: Complemental strand, 49408326 - 49408169
Alignment:
Q  187 gcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgnnnnnn 285  Q
    ||||||||||||||||||| ||   |||||||||| ||||||||||||||  | ||| ||| |||||||||||||  |||| |||||||| |||          
T  49408326 gcttaattacacttttggtactcgcattttgaccatctcacgaaaatggttgtgtctctttcaaatcgaacaaaactgtcc-taaactatcatgtttttt 49408228  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttag 347  Q
     ||||||||||||||| |||   ||||  |||| |||||||||| ||||||| |||||||||    
T  49408227 tgcagttttagtcctacctc---attttcaactccagaaacgcaaagaaatggcagttttag 49408169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 239
Target Start/End: Original strand, 30104474 - 30104535
Alignment:
Q  178 tattttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    ||||||| |||||||||||||||||||||||  | |||||||| |||||||||| |||||||    
T  30104474 tatttttaggcttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcct 30104535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 268
Target Start/End: Complemental strand, 37076219 - 37076138
Alignment:
Q  187 gcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtcct 268  Q
    ||||||||||| ||||||||||   ||||||| || ||||||||||||||||   || ||| ||||||||||||||||||||    
T  37076219 gcttaattacatttttggtcctcgcattttgatcagctcacgaaaatggtcccgcctctttcaaatcgaacaaaatcgtcct 37076138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 186 - 347
Target Start/End: Complemental strand, 5137526 - 5137365
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    |||||||||||||||||||||||  | ||||| || ||||| |||| |||| ||  | |||| |||| ||||||||| |||||| || |||             
T  5137526 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggttctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 5137427  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttag 347  Q
     ||| ||||||||||||||||   |||| |||| |||||||||| |||||||||||||||||    
T  5137426 tgcatttttagtcctatctcctattttcaaactccagaaacgcagagaaatgacagttttag 5137365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 188 - 268
Target Start/End: Original strand, 50900534 - 50900614
Alignment:
Q  188 cttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtcct 268  Q
    |||||||| |||||||||| |   ||||||| || |||||||||||||||||| || ||| ||||||||||||| ||||||    
T  50900534 cttaattaaacttttggtcttcaaattttgatcagctcacgaaaatggtcctaactctttcaaatcgaacaaaaccgtcct 50900614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 261
Target Start/End: Original strand, 20840560 - 20840635
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaa 261  Q
    |||||||||||||||||||||||  | ||||| || |||||||||| |||||||  |||||| |||| ||||||||    
T  20840560 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaatagaacaaaa 20840635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 32535514 - 32535455
Alignment:
Q  180 ttttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    |||||||||||||||||||||||||||||  | ||||| || |||||||||| |||||||    
T  32535514 ttttttggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 32535455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 37727481 - 37727422
Alignment:
Q  180 ttttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    |||||||||||||||||||||||||||||  | ||||| || |||||||||| |||||||    
T  37727481 ttttttggcttaattacacttttggtcctcatgttttggcctactcacgaaactggtcct 37727422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 269
Target Start/End: Complemental strand, 39556126 - 39556039
Alignment:
Q  182 ttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtcctt 269  Q
    |||||||||||||||||||||||||||  | ||||| || |||||||||| |||||||  | |||| |||  ||||||||| ||||||    
T  39556126 ttttggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtcctt 39556039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 279
Target Start/End: Complemental strand, 8874205 - 8874139
Alignment:
Q  213 ttttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 279  Q
    ||||||||| |||||||||||||||||   | ||||||||||||||||| | ||| |||||||||||    
T  8874205 ttttgaccagctcacgaaaatggtcctgcttcttttaaatcgaacaaaaccttccctaaactatatg 8874139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 23644462 - 23644515
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    |||||||||||||||||||||||  ||||||| || |||||||||| |||||||    
T  23644462 ggcttaattacacttttggtcctcgtattttggcctactcacgaaattggtcct 23644515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 261
Target Start/End: Complemental strand, 25612536 - 25612447
Alignment:
Q  172 aactaatattttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaa 261  Q
    ||||| |||| || || ||||||||||||||||||||  | |||||||| |||||||||| |||||||  | |||| |||| ||||||||    
T  25612536 aactattattattgggtttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaatagaacaaaa 25612447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 239
Target Start/End: Complemental strand, 29801972 - 29801908
Alignment:
Q  175 taatattttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    |||||| ||| |||||||||||||||||| ||||  ||||||| || |||||||||| |||||||    
T  29801972 taatatatttaggcttaattacacttttgatcctcgtattttggcctactcacgaaactggtcct 29801908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 24301107 - 24301048
Alignment:
Q  180 ttttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    ||||| |||||||||||||||||||||||  | ||||| || |||||||||| |||||||    
T  24301107 tttttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 24301048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 39555578 - 39555661
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtcctt 269  Q
    |||||||||||||||||||||||  | ||||| || |||||||||| |||||||  | |||| |||  ||||||||| ||||||    
T  39555578 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaatggtcctt 39555661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 347
Target Start/End: Original strand, 8873694 - 8873850
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgnnnnnnng 287  Q
    ||||||||| ||||||||||   ||||||| ||  | |||||||||||| | ||| ||||||||||||||||| |||| | || |||| |||       |    
T  8873694 ttaattaca-ttttggtcctcgcattttgatcagtttacgaaaatggtcatgtctcttttaaatcgaacaaaaccgtcat-aacctatcatgtttttttg 8873791  T
Q  288 cagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttag 347  Q
    ||||||||||| || |||| |||||  |||| |||||||||| |||||||||||||||||    
T  8873792 cagttttagtcttacctcc-tattttcaacttcagaaacgcagagaaatgacagttttag 8873850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 261
Target Start/End: Complemental strand, 12141239 - 12141162
Alignment:
Q  184 ttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaa 261  Q
    |||||||||||||||||||| ||||   ||||| | ||  ||||| ||||||||||| || ||| |||||||||||||    
T  12141239 ttggcttaattacacttttgttcctcgcatttttatcagatcacgtaaatggtcctacctctttcaaatcgaacaaaa 12141162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 261
Target Start/End: Complemental strand, 23645016 - 23644935
Alignment:
Q  180 ttttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaa 261  Q
    ||||| |||||||||| ||||||||||||  | ||||| || |||||||||| |||||||| | |||| |||  ||||||||    
T  23645016 tttttcggcttaattatacttttggtcctcgtgttttggcctactcacgaaattggtcctacccttttaaaacagaacaaaa 23644935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 27393661 - 27393714
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    |||||||||||||||||||||||  | |||||||| |||||| ||| |||||||    
T  27393661 ggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggtcct 27393714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 31779197 - 31779144
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    |||||||||||||||||||||||  | ||||| || |||||||||| |||||||    
T  31779197 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 31779144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 237
Target Start/End: Original strand, 5136983 - 5137031
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtc 237  Q
    ||||||||||||||||||||  | ||||| ||||||||||||| |||||    
T  5136983 ttaattacacttttggtcctcgtgttttggccaactcacgaaattggtc 5137031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 25853233 - 25853285
Alignment:
Q  185 tggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtc 237  Q
    ||||||||||||||||||||||||  | ||||| || |||||||||| |||||    
T  25853233 tggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtc 25853285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 37847265 - 37847206
Alignment:
Q  287 gcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttag 347  Q
    |||||||||||||||||| |||||||  |||| |||||| ||| |||||||||| ||||||    
T  37847265 gcagttttagtcctatct-cctattttcaacttcagaaatgcagagaaatgacaattttag 37847206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 43973441 - 43973489
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatg 234  Q
    |||||||||||||||||||||||  | ||||| || |||||||||||||    
T  43973441 ggcttaattacacttttggtcctcgtgttttgtcctactcacgaaaatg 43973489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 115; Significance: 2e-58; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 188 - 354
Target Start/End: Complemental strand, 34555926 - 34555759
Alignment:
Q  188 cttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-nnnnnnn 286  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            
T  34555926 cttaattacacttttagtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttt 34555827  T
Q  287 gcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    |||||||||||| |||||||||||||| |||| |||||||||| ||||||||||||||||||||||||    
T  34555826 gcagttttagtcatatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaacc 34555759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 185 - 354
Target Start/End: Complemental strand, 10279094 - 10278929
Alignment:
Q  185 tggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnn 284  Q
    ||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         
T  10279094 tggcttaattacacttttgatcctaccgttttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt- 10278996  T
Q  285 nngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
       ||||||||||||||||||| ||| || |||| ||||||| || ||||||||||||||||||||||||    
T  10278995 ---cagttttagtcctatctccatatatccaactccagaaacacacagaaatgacagttttagtccaacc 10278929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 186 - 351
Target Start/End: Original strand, 37505067 - 37505232
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||          
T  37505067 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggttctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 37505166  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtcca 351  Q
     |||||||||||||||| |||||||||  |||| || ||| | | |||||||||||||||||||||    
T  37505167 tgcagttttagtcctatttccctattttcaactccaaaaatgaacagaaatgacagttttagtcca 37505232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 186 - 350
Target Start/End: Original strand, 9992154 - 9992318
Alignment:
Q  186 ggcttaattacacttttggtcctactatttt-gaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnn 284  Q
    ||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||         
T  9992154 ggcttaattacacttttggtcctaccatttttgaccaactcacggaaatggtcctatcttttttaaatcgaacaaaatggtccttaaactatatg-tttt 9992252  T
Q  285 nngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtcc 350  Q
      ||||||||||||||||||||||||||| |||| ||||||| || ||||||||||||||||||||    
T  9992253 ttgcagttttagtcctatctccctatttccaactccagaaacacacagaaatgacagttttagtcc 9992318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 189 - 354
Target Start/End: Original strand, 21938566 - 21938730
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnngc 288  Q
    |||||||||||||||||| ||| ||||||| ||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||       ||    
T  21938566 ttaattacacttttggtcttaccattttgatcaactcacgaaaatgatcttatcttttttaaatcgaacaaaatcgtccataaactatatg-ttttttgc 21938664  T
Q  289 agttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    ||||||||||||||||||||||||| |||| || ||||||| ||||||||||||||||||||||||    
T  21938665 agttttagtcctatctccctatttccaactccataaacgcacagaaatgacagttttagtccaacc 21938730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 184 - 354
Target Start/End: Complemental strand, 9992703 - 9992534
Alignment:
Q  184 ttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnn 283  Q
    |||||||||||||||||||||||||   |||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||        
T  9992703 ttggcttaattacacttttggtccttgcattttgacaaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtgcttaaactatatg-ttt 9992605  T
Q  284 nnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
       ||||| ||||||||||||||||||||  |||| ||||||||| ||||||||||||||||| |||||||    
T  9992604 tttgcagtattagtcctatctccctattttcaactccagaaacgcgtagaaatgacagttttaatccaacc 9992534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 43663219 - 43663319
Alignment:
Q  10 acatcatcatcactacattatcttctgagcatccaaaatgtaccaaatatcacataaataaagaaagggctgagtcctgctagaacaggatttctataca 109  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43663219 acatcatcatcactacgttatcttctgagcatccaaaatgtaccaaatatcacataaataaagaaagggctgagtcctgctagaacaggatttctataca 43663318  T
Q  110 g 110  Q
    |    
T  43663319 g 43663319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 186 - 354
Target Start/End: Original strand, 30786771 - 30786939
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaat-ggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnn 284  Q
    |||||||||||||||||||| ||   |||||||||||||||||||||| ||||||| || ||||||||||||||||||||||| |||||||||||         
T  30786771 ggcttaattacacttttggttcttgcattttgaccaactcacgaaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg-tttt 30786869  T
Q  285 nngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
      ||||||||||||||||||||||||||| |||| || ||||||| ||||||||| ||||||||||||||    
T  30786870 ttgcagttttagtcctatctccctatttccaactccataaacgcacagaaatgacggttttagtccaacc 30786939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 188 - 354
Target Start/End: Original strand, 10278550 - 10278716
Alignment:
Q  188 cttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnng 287  Q
    |||||||||||||||||||||   |||||||||||||||||||| || ||||| || ||||||||||||||||||||||| |||||||||||       |    
T  10278550 cttaattacacttttggtccttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttg 10278649  T
Q  288 cagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    |||||||||||||||||||| ||||  |||| |||||||||| | |||||||| |||||||||||||    
T  10278650 cagttttagtcctatctccccatttgcaactccagaaacgcacataaatgacaattttagtccaacc 10278716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 187 - 354
Target Start/End: Complemental strand, 44954771 - 44954605
Alignment:
Q  187 gcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnn 286  Q
    ||||||||||||||||||||||   ||||||||||||||| ||||||| || || |||||||||||| ||||||||| ||| |||||||||||           
T  44954771 gcttaattacacttttggtcctcgcattttgaccaactcatgaaaatgatcataccttttttaaatcaaacaaaatcatccataaactatatg-tttttt 44954673  T
Q  287 gcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    ||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||| ||||    
T  44954672 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtcaaacc 44954605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 181 - 354
Target Start/End: Complemental strand, 16299232 - 16299061
Alignment:
Q  181 tttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgn 280  Q
    |||| |||||||||| |||||| ||||||| ||||||| |||||| ||||||||||||||| |||||| ||| ||||||||||||||||||||||||||     
T  16299232 ttttaggcttaattatactttttgtcctaccattttgatcaactcgcgaaaatggtcctat-tttttttaattgaacaaaatcgtccttaaactatatg- 16299135  T
Q  281 nnnnnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
          |||||||||||||||||||| |||||| |||| |||||||||| |||||||||| ||||||| |||||    
T  16299134 ttttttgcagttttagtcctatctccatatttccaactccagaaacgcacagaaatgacaattttagttcaacc 16299061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 189 - 354
Target Start/End: Complemental strand, 17641912 - 17641743
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaacta----tatgnnnnn 284  Q
    ||||||||||||||||||||   |||||||||||||||||||||||||| || || ||||||||||||||||||||||| |||||||    |||          
T  17641912 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtccctaaactatttttattttttt 17641813  T
Q  285 nngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
      ||||||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||| |||||    
T  17641812 ttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagttcaacc 17641743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 180 - 353
Target Start/End: Complemental strand, 50305337 - 50305162
Alignment:
Q  180 ttttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaact--ata 277  Q
    |||||||| ||||||||||||||||| |||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  50305337 ttttttggtttaattacacttttggttctaccattttaaccaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatata 50305238  T
Q  278 tgnnnnnnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaac 353  Q
    |        |||||||||||| |||||||||||||  |||| || |||| || | |||||||||||||| ||||||    
T  50305237 tttttttttgcagttttagtcatatctccctattttcaactccataaacacacataaatgacagttttaatccaac 50305162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 186 - 354
Target Start/End: Complemental strand, 52336056 - 52335889
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    ||||||||||| |||||||| |||  ||||||||||||||| |||| |||||||| || ||||||||||||||||||||||| ||||||||||           
T  52336056 ggcttaattactcttttggttctatcattttgaccaactcatgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatat-tttttt 52335958  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     |||||||||||| |||||||||||||| |||| |||||||||| | ||||||||||||||||||||||    
T  52335957 tgcagttttagtcatatctccctatttccaactccagaaacgcacataaatgacagttttagtccaacc 52335889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 180 - 354
Target Start/End: Complemental strand, 37505619 - 37505447
Alignment:
Q  180 ttttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 279  Q
    |||||||||||||||| | ||||||||||  ||||||||||||||||||||| || || ||||| ||||||| | ||||||||||||| |||||||||||    
T  37505619 ttttttggcttaattatatttttggtccttttattttgaccaactcacgaaattgatcatatctcttttaaaacaaacaaaatcgtccataaactatatg 37505520  T
Q  280 nnnnnnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
           ||||||||||||||||||||||||||  |||| || ||||||| | ||||||||||||||||||||||    
T  37505519 --tttttgcagttttagtcctatctccctattttcaactccaaaaacgcacaaaaatgacagttttagtccaacc 37505447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 186 - 354
Target Start/End: Original strand, 1837505 - 1837672
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    |||||||||||||||||||||||   ||||||| |||||||||||| || || ||||| |||||||||||||||||| |||| |||||||||||          
T  1837505 ggcttaattacacttttggtccttgcattttgatcaactcacgaaattgatcatatctcttttaaatcgaacaaaattgtccctaaactatatg-ttttt 1837603  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     |||||||||||| |||||||||||||  |||| |||||||||| | ||||||||||||||||||||||    
T  1837604 tgcagttttagtcatatctccctattttcaactccagaaacgcacataaatgacagttttagtccaacc 1837672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 186 - 354
Target Start/End: Complemental strand, 2868254 - 2868087
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    |||||||||||||||||| ||||   |||||||||||| |||||||||||||||| || ||||||||||||||||||||||| || ||||||||          
T  2868254 ggcttaattacacttttgatcctcacattttgaccaacacacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctacactatatg-ttttt 2868156  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     |||||||||||| |||| ||||||||| |||| |||||||||| | || |||||||||||||||||||    
T  2868155 tgcagttttagtcatatccccctatttccaactccagaaacgcacataagtgacagttttagtccaacc 2868087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 181 - 353
Target Start/End: Original strand, 8229632 - 8229806
Alignment:
Q  181 tttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgn 280  Q
    |||| |||||||||||||||||| ||||   ||||||| ||||||||||||||| | |||  | |||||||||||| |||||||||  |||||||||||     
T  8229632 ttttaggcttaattacacttttgatcctcacattttgatcaactcacgaaaatgattctacatcttttaaatcgaataaaatcgtctctaaactatatgt 8229731  T
Q  281 nnnnnn--gcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaac 353  Q
            |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  8229732 ttttttttgcagttttagtcctatctccctatttctaactccagaaacgcacagaaatgacagttttagtccaac 8229806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 188 - 354
Target Start/End: Complemental strand, 44582603 - 44582436
Alignment:
Q  188 cttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnng 287  Q
    |||||||||||||||||| |||| ||||||| |||||||||||||||||| |||| |||| |||||||||||||||||| ||||||||||||       |    
T  44582603 cttaattacacttttggttctaccattttgatcaactcacgaaaatggtcatatcattttcaaatcgaacaaaatcgtctttaaactatatgtttttttg 44582504  T
Q  288 cagttttagtcctatctccctatttctaactac-agaaacgcatagaaatgacagttttagtccaacc 354  Q
    ||||||||||| | |||||||||||  | || | | ||||||| ||||||||||||||||||||||||    
T  44582503 cagttttagtcttgtctccctattttcagctccaaaaaacgcacagaaatgacagttttagtccaacc 44582436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 186 - 354
Target Start/End: Original strand, 34555379 - 34555548
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-nnnnn 284  Q
    |||||||||||||||||||||||   |||||||| ||||| ||||| |||| ||| || ||||||||||||||||||||||| |||||||||||          
T  34555379 ggcttaattacacttttggtccttgcattttgactaactcgcgaaattggtgctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt 34555478  T
Q  285 nngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
       |||||||||||||||||||||||||| |||| |||||||||| |||||||| ||||||||| |||||    
T  34555479 ttacagttttagtcctatctccctatttccaactccagaaacgcacagaaatgatagttttagttcaacc 34555548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 182 - 354
Target Start/End: Original strand, 23340179 - 23340350
Alignment:
Q  182 ttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnn 281  Q
    |||||||||||||||||||||| || |   |||||||||||||||||||| ||||||||||| ||||||||||||||||||||  | ||||||||||       
T  23340179 ttttggcttaattacacttttgatcattgcattttgaccaactcacgaaattggtcctatctcttttaaatcgaacaaaatcgctcataaactatat-at 23340277  T
Q  282 nnnnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
         |||||||||||| ||||||| |||||| |||| |||||||||  |||||||||||||||||| |||||    
T  23340278 tttttgcagttttagtcatatctccttatttccaactccagaaacgctcagaaatgacagttttagttcaacc 23340350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 189 - 354
Target Start/End: Original strand, 44954229 - 44954393
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnngc 288  Q
    ||||||||| |||| ||||  | |||||||||||||||||||||||||| || |||||||||||| |||||||||||| ||||| ||||||       ||    
T  44954229 ttaattacattttttgtccacccattttgaccaactcacgaaaatggtcataccttttttaaatccaacaaaatcgtctttaaattatatg-ttttttgc 44954327  T
Q  289 agttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    |||||||||| |||||| || |||| |||| |||||||||| ||||||||||||||||||||||||    
T  44954328 agttttagtcgtatctctctgtttccaactccagaaacgcacagaaatgacagttttagtccaacc 44954393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 188 - 353
Target Start/End: Original strand, 2867913 - 2868077
Alignment:
Q  188 cttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnng 287  Q
    |||||||||| |||||||| |   ||||||||||||||||||||||| || ||||| |||||||||||||||||| ||| ||||||||||||       |    
T  2867913 cttaattacaattttggtcatcgcattttgaccaactcacgaaaatgatcatatctcttttaaatcgaacaaaattgtcgttaaactatatg-ttttttg 2868011  T
Q  288 cagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaac 353  Q
    ||||||||||| ||| ||||||| ||||||| || ||||||| | |||||||||||||||||||||    
T  2868012 cagttttagtcatatttccctatctctaactccaaaaacgcacataaatgacagttttagtccaac 2868077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 186 - 354
Target Start/End: Original strand, 4080021 - 4080188
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    |||| ||||||||||||||||||   || ||||||||||||||||| || || || || ||||||||||||||||||||||| |||||||||||          
T  4080021 ggctcaattacacttttggtccttgcatcttgaccaactcacgaaattgatcgtacctattttaaatcgaacaaaatcgtccctaaactatatgtttttt 4080120  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
      ||||||||||| |||||||||||||| ||||  ||||||||| | ||||||||||||||||||||||    
T  4080121 a-cagttttagtcatatctccctatttccaactctagaaacgcacaaaaatgacagttttagtccaacc 4080188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 189 - 354
Target Start/End: Complemental strand, 8230184 - 8230020
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnngc 288  Q
    ||||||||| ||||||| ||   ||||||||| | |||||||||||||  || || ||||||||||||||||||||||| |||||||||||       ||    
T  8230184 ttaattacatttttggttctcgcattttgacctattcacgaaaatggttatacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt-gc 8230086  T
Q  289 agttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    |||||||||| |||| ||||||||| |||| |||||||||| ||||||||||||||||||||||||    
T  8230085 agttttagtcatatccccctatttccaactccagaaacgcacagaaatgacagttttagtccaacc 8230020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 186 - 354
Target Start/End: Original strand, 29438930 - 29439098
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    |||||||||||||||||||||||   |||||||||||||||||||| |||||||| || ||||||||||||||||||||||| ||||||| |||          
T  29438930 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactaaatgtttttt 29439029  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     ||||||||||||||||||| ||||||  || |  | |||| || | |||| |||||||||||||||||    
T  29439030 tgcagttttagtcctatctctctattttcaattcaaaaaacacacaaaaataacagttttagtccaacc 29439098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 189 - 279
Target Start/End: Complemental strand, 37421488 - 37421397
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatctt-ttttaaatcgaacaaaatcgtccttaaactatatg 279  Q
    |||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  37421488 ttaattacacttttagtcataccattttgaccaactcacgaaaatggtcctatctttttttaaatcgaacaaaatcgtccttaaactatatg 37421397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 189 - 279
Target Start/End: Complemental strand, 29439465 - 29439375
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 279  Q
    |||||| |||||||||||| || ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  29439465 ttaattgcacttttggtcccaccattttgatcaactcacgaaaatgatcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 29439375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 187 - 354
Target Start/End: Original strand, 16298683 - 16298849
Alignment:
Q  187 gcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnn 286  Q
    ||||||||||| |||||| |||   |||||||||||||||||||| ||||| || || ||||||||||||||||||||||| |||||||||||           
T  16298683 gcttaattacatttttggcccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatg-tttttt 16298781  T
Q  287 gcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    |||||||||||||||||| |||||||| ||||   |||||||| | |||||| |||||||||||||||    
T  16298782 gcagttttagtcctatctacctatttccaactctggaaacgcaaataaatgatagttttagtccaacc 16298849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 186 - 279
Target Start/End: Complemental strand, 30787344 - 30787251
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 279  Q
    |||||||||||||||||| |||||| |||| || |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  30787344 ggcttaattacacttttgatcctaccatttagatcaactcacgaaaatggtcatatctttttaaaatcgaacaaaatcgtccttaaactatatg 30787251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 189 - 354
Target Start/End: Original strand, 37421163 - 37421329
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-nnnnnnng 287  Q
    |||||||||||||||||| |   ||||||||||| |||||||| ||||| || || ||||||||||||||||||||||| |||||||||||        |    
T  37421163 ttaattacacttttggtctttgcattttgaccaattcacgaaattggtcttacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttttg 37421262  T
Q  288 cagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    ||||||||||| ||| |||||||||| |||| || ||||||| ||||||||||||||||||| ||||    
T  37421263 cagttttagtcatatttccctatttccaactccaaaaacgcacagaaatgacagttttagtctaacc 37421329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 188 - 354
Target Start/End: Original strand, 1744330 - 1744494
Alignment:
Q  188 cttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnng 287  Q
    ||||||||||||||||||| |  ||||||||| |||||||| ||||| ||||| ||||||  | || || |||||||||| ||||||||||        |    
T  1744330 cttaattacacttttggtcttcgtattttgacaaactcacgtaaatgatcctaccttttt--agtcaaataaaatcgtccctaaactatatatttttttg 1744427  T
Q  288 cagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    ||||||||||| |||||||||||||| |||| |||||||||| | ||||||||||||||||||||||    
T  1744428 cagttttagtcatatctccctatttccaactccagaaacgcacataaatgacagttttagtccaacc 1744494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 184 - 354
Target Start/End: Complemental strand, 444099 - 443930
Alignment:
Q  184 ttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnn 283  Q
    |||||||||||| ||||||| || |   |||||||||||||||||||| | ||| || || ||||||||||||||||||||| | |||||||||||        
T  444099 ttggcttaattatacttttgatctttgcattttgaccaactcacgaaatttgtcatacctcttttaaatcgaacaaaatcgttcctaaactatatg-ttt 444001  T
Q  284 nnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
       ||||||||||||||||||||||||||| || | || ||||||  | ||||||||||||||||||||||    
T  444000 tttgcagttttagtcctatctccctatttccaattccataaacgcgcataaatgacagttttagtccaacc 443930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 189 - 347
Target Start/End: Original strand, 39485068 - 39485224
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnngc 288  Q
    ||||||||||||||||||||   |||||||| | |||||||||||||||||| || ||| ||||||||||||||||||| |||||||||||       ||    
T  39485068 ttaattacacttttggtcctcgcattttgactagctcacgaaaatggtcctacctctttcaaatcgaacaaaatcgtccctaaactatatg-ttttttgc 39485166  T
Q  289 agttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttag 347  Q
    |||||||||||||||| |||||||  |||| ||||||| || ||| |||||||||||||    
T  39485167 agttttagtcctatct-cctattttcaacttcagaaacacagagagatgacagttttag 39485224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 188 - 354
Target Start/End: Original strand, 44582059 - 44582224
Alignment:
Q  188 cttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnng 287  Q
    |||||||||||||||||||||   ||||||||||||| |||||| |||||||| || ||||||||||||||||||||||  |||| ||||||       |    
T  44582059 cttaattacacttttggtccttacattttgaccaactaacgaaattggtcctacctcttttaaatcgaacaaaatcgtctctaaattatatg-ttttttg 44582157  T
Q  288 cagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    ||||||||||||||||||  | |||| |||| || ||||||| | |||||||| |||||||||||||    
T  44582158 cagttttagtcctatctctttgtttccaactccataaacgcacataaatgacaattttagtccaacc 44582224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 189 - 347
Target Start/End: Original strand, 45048158 - 45048314
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnngc 288  Q
    ||||||||||||||||||||   ||||||||||||| ||||||||||| ||| || |||||||| |||||||||||||| |||||||||||       ||    
T  45048158 ttaattacacttttggtccttgcattttgaccaacttacgaaaatggttctacctcttttaaattgaacaaaatcgtccataaactatatg-ttttttgc 45048256  T
Q  289 agttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttag 347  Q
    ||||||||||||| || | |||||  |||| ||||||||||||||||| ||||||||||    
T  45048257 agttttagtcctacct-catattttcaactccagaaacgcatagaaataacagttttag 45048314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 188 - 279
Target Start/End: Original strand, 50304441 - 50304532
Alignment:
Q  188 cttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 279  Q
    |||||||||||||||||||||   |||||||||||||||||||||||||| || || ||||||||||||||||||||||  |||||||||||    
T  50304441 cttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtctctaaactatatg 50304532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 189 - 354
Target Start/End: Original strand, 6224700 - 6224866
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatat-gnnnnnnng 287  Q
    ||||||||| ||||| |||||  |||||||||||||||  |||||||| ||   |||||||||||||||||||||||||||||| |||||              
T  6224700 ttaattacatttttgatcctatcattttgaccaactcataaaaatggttcttgtttttttaaatcgaacaaaatcgtccttaaattatatatatttttta 6224799  T
Q  288 cagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    ||||||||||| |||||| ||||||| |||| |||||||||| | ||||||||||||||||| ||||    
T  6224800 cagttttagtcttatctctctatttccaactccagaaacgcacataaatgacagttttagtcaaacc 6224866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 224 - 354
Target Start/End: Original strand, 17641403 - 17641532
Alignment:
Q  224 tcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnngcagttttagtcctatctccctatttctaactacaga 323  Q
    |||||||||||||| || ||||||||||||||||||||| || ||||||||||| |       | ||||||||| ||||||||||||||| |||| ||||    
T  17641403 tcacgaaaatggtcataccttttttaaatcgaacaaaattgttcttaaactatacgtttttt-gtagttttagttctatctccctatttccaactccaga 17641501  T
Q  324 aacgcatagaaatgacagttttagtccaacc 354  Q
    |||||| | |||||||||||||||| |||||    
T  17641502 aacgcacataaatgacagttttagttcaacc 17641532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 186 - 276
Target Start/End: Complemental strand, 50926787 - 50926697
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 276  Q
    ||||||||||||||||||||| |   |||||||||| ||||||||||||||||  ||| ||| ||||||||||||| ||||| ||||||||    
T  50926787 ggcttaattacacttttggtcatcgcattttgaccagctcacgaaaatggtcccgtctctttcaaatcgaacaaaaccgtccctaaactat 50926697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 187 - 276
Target Start/End: Original strand, 23526659 - 23526748
Alignment:
Q  187 gcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 276  Q
    ||||| ||||||||||||||||   |||||||||| |||||||||||||||||  || ||||||||||||||||||| ||| || |||||    
T  23526659 gcttagttacacttttggtcctcacattttgaccagctcacgaaaatggtcctgcctcttttaaatcgaacaaaatcatccctagactat 23526748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 354
Target Start/End: Complemental strand, 29021411 - 29021243
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-atgnnnnn 284  Q
    ||||||||| |||||||||||||   |||||||||| |||||||||||| || |  || ||| ||||||||||||||||||| |||| ||| | |         
T  29021411 ggcttaattgcacttttggtcctcacattttgaccagctcacgaaaatgttcatgcctctttcaaatcgaacaaaatcgtccctaaattatcacggtttt 29021312  T
Q  285 nngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
      |||||||||||| || | ||||||||  |||| |||||||||| | ||||||||||||| ||||||||    
T  29021311 ttgcagttttagtctta-ccccctattttcaactccagaaacgcacataaatgacagtttttgtccaacc 29021243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 188 - 276
Target Start/End: Original strand, 50926232 - 50926320
Alignment:
Q  188 cttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 276  Q
    |||||||||| |||||||||| | |||||||||| |||||||||||  || || || ||| ||||||||||||||||||| ||||||||    
T  50926232 cttaattacagttttggtcctcccattttgaccagctcacgaaaataatcatacctctttcaaatcgaacaaaatcgtccctaaactat 50926320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 350
Target Start/End: Complemental strand, 9833699 - 9833535
Alignment:
Q  185 tggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnn 284  Q
    ||||||||||  ||||||| ||||  || |||||||||||||||||||| ||| |  || ||| ||||||||||||||||||| |||| |||            
T  9833699 tggcttaattgtacttttgatccttgtactttgaccaactcacgaaaatagtcatgcctctttcaaatcgaacaaaatcgtccctaaaatattatgtttt 9833600  T
Q  285 nngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtcc 350  Q
      ||||||||||||||| | ||||||||  |||| |||||||||| |||||| ||| |||||||||    
T  9833599 ttgcagttttagtccta-ccccctattttcaactccagaaacgcacagaaataacatttttagtcc 9833535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 278
Target Start/End: Complemental strand, 17088685 - 17088593
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatat 278  Q
    |||||||||||||||||||||||   ||||||| || ||||||||||||||| |  || ||| ||||| ||||||| ||||| ||||||||||    
T  17088685 ggcttaattacacttttggtcctctcattttgaacagctcacgaaaatggtcatgcctctttcaaatcaaacaaaaccgtccctaaactatat 17088593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 276
Target Start/End: Original strand, 44291295 - 44291391
Alignment:
Q  180 ttttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 276  Q
    ||||||| ||||||| |||||||||||||   |||||||||| ||||||||||||||  |  || ||| |||| |||||||||||||| ||||||||    
T  44291295 ttttttgacttaattgcacttttggtcctcacattttgaccagctcacgaaaatggttatgcctctttcaaattgaacaaaatcgtccataaactat 44291391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 276
Target Start/End: Complemental strand, 44802723 - 44802627
Alignment:
Q  180 ttttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 276  Q
    ||||| |||||||||||||||||||||||   |||||||||| ||||||||| ||||| |  || ||| |||  |||||||||||||| ||||||||    
T  44802723 tttttaggcttaattacacttttggtccttgcattttgaccagctcacgaaagtggtcatgcctctttcaaacggaacaaaatcgtccctaaactat 44802627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 183 - 275
Target Start/End: Original strand, 25274753 - 25274845
Alignment:
Q  183 tttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaacta 275  Q
    |||||| ||||| |||||||||||||   |||||||||| ||||||||||||||| |  || ||| ||||||||||||| ||| | |||||||    
T  25274753 tttggcataattgcacttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgttcctaaacta 25274845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 268
Target Start/End: Complemental strand, 45048678 - 45048599
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtcct 268  Q
    ||||||||||||||||||||   ||||||||||  |||||||||||||| || || |||  |||||||||||| ||||||    
T  45048678 ttaattacacttttggtcctcgcattttgaccagttcacgaaaatggtcatacctctttccaatcgaacaaaaccgtcct 45048599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 272
Target Start/End: Original strand, 29020876 - 29020966
Alignment:
Q  182 ttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaa 272  Q
    ||||||||||||| ||| | ||||| |  |||||||| || ||||  ||||||||| | ||| ||||||||||||||||||| ||||||||    
T  29020876 ttttggcttaattgcacatatggtcttcgtattttgatcagctcataaaaatggtcatgtctcttttaaatcgaacaaaatcatccttaaa 29020966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 353
Target Start/End: Complemental strand, 30787214 - 30787152
Alignment:
Q  291 ttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaac 353  Q
    |||||||||||| |||||||||  |||| || ||| ||| |||||||||||||||||||||||    
T  30787214 ttttagtcctatttccctattttcaactccataaatgcagagaaatgacagttttagtccaac 30787152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 239
Target Start/End: Complemental strand, 29870172 - 29870111
Alignment:
Q  178 tattttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    |||||||||||||||||||||||||||||||  | ||||| || ||||| |||| |||||||    
T  29870172 tattttttggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcct 29870111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 186 - 259
Target Start/End: Complemental strand, 39843570 - 39843497
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaa 259  Q
    ||||| |||||||||| ||||||   |||| ||||||||||||||| |||||||  |||||| |||||||||||    
T  39843570 ggctttattacactttcggtcctcgcatttagaccaactcacgaaattggtcctgcctttttcaaatcgaacaa 39843497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 266
Target Start/End: Complemental strand, 44291854 - 44291777
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtc 266  Q
    |||||| || |||| |||||  ||||||||||| |||| |||||||||| | ||| |||||||||||| |||||||||    
T  44291854 ttaattgcatttttagtccttgtattttgaccagctcatgaaaatggtcatgtctcttttaaatcgaataaaatcgtc 44291777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 276
Target Start/End: Complemental strand, 23527074 - 23526986
Alignment:
Q  188 cttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 276  Q
    |||||||| ||||||| ||||   ||||||| || |||| |||||||||| |  |||||||||||||||||||| ||||  ||||||||    
T  23527074 cttaattatacttttgatcctcacattttgatcagctcatgaaaatggtcatgccttttttaaatcgaacaaaaccgtctctaaactat 23526986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 50419393 - 50419473
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtcctt 269  Q
    |||||| |||||||||||||   ||||  |||||||||| ||||||||| | ||||||| |||||||||||| | ||||||    
T  50419393 ttaattgcacttttggtcctcgcatttaaaccaactcacaaaaatggtcatgtctttttcaaatcgaacaaagtagtcctt 50419473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 33144470 - 33144411
Alignment:
Q  180 ttttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    ||||||| |||||||||||||||||||||  | ||||| || |||||||||| |||||||    
T  33144470 ttttttgacttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 33144411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 186 - 261
Target Start/End: Complemental strand, 50419806 - 50419731
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaa 261  Q
    ||||||||| ||||||||||| |   |||| ||||||||||||||| |||||||  |||||| |||| ||||||||    
T  50419806 ggcttaattgcacttttggtcatcgcatttagaccaactcacgaaattggtcctgcctttttaaaattgaacaaaa 50419731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 268
Target Start/End: Original strand, 17088146 - 17088228
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtcct 268  Q
    |||||||||||||| |||||| |   |||||||||| ||||||||||||||  |  || ||| ||||||||||||| ||||||    
T  17088146 ggcttaattacactgttggtcatcgcattttgaccagctcacgaaaatggttttgcctctttcaaatcgaacaaaaccgtcct 17088228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 26859054 - 26859112
Alignment:
Q  181 tttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    ||||||||||||||||||||||||||||  | ||||| || ||| |||||| |||||||    
T  26859054 tttttggcttaattacacttttggtccttgtgttttggcctactaacgaaactggtcct 26859112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 29307488 - 29307434
Alignment:
Q  185 tggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    |||||||||| |||||||||||||  | |||||||| |||||||||| |||||||    
T  29307488 tggcttaattgcacttttggtcctcgtgttttgacctactcacgaaactggtcct 29307434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 5540363 - 5540310
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    |||||||||||||||||||||||  | ||||| || |||||||||| |||||||    
T  5540363 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 5540310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 8679090 - 8679033
Alignment:
Q  182 ttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    |||||||||||||||||||||||||||  | ||||| || ||||||| || |||||||    
T  8679090 ttttggcttaattacacttttggtcctcgtgttttggcctactcacggaactggtcct 8679033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 18984664 - 18984611
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    |||||||||||||||||||||||  | ||||| || |||||||||| |||||||    
T  18984664 ggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcct 18984611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 39154565 - 39154512
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    |||||||||||||||||||||||  | ||||| || |||||||||| |||||||    
T  39154565 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 39154512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 50970278 - 50970331
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    |||||||||||||||||||||||  | ||||| || |||||||||| |||||||    
T  50970278 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 50970331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 52268290 - 52268343
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    |||||||||||||||||||||||  ||||||| ||  ||||||||| |||||||    
T  52268290 ggcttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcct 52268343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 239
Target Start/End: Original strand, 5539817 - 5539869
Alignment:
Q  187 gcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    ||||||||||||||||||||||  | ||||| || |||||||||| |||||||    
T  5539817 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcct 5539869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 239
Target Start/End: Original strand, 8678542 - 8678594
Alignment:
Q  187 gcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    ||||||||||||||||||||||  | ||||| || |||||||||| |||||||    
T  8678542 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 8678594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 260
Target Start/End: Complemental strand, 9844818 - 9844742
Alignment:
Q  184 ttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaa 260  Q
    ||||||||||| ||||||| ||| | ||||||| |||||  |||| || ||||| | ||||||| ||||||||||||    
T  9844818 ttggcttaattgcacttttagtcttcctattttaaccaatccacgcaattggtcatgtctttttcaaatcgaacaaa 9844742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 100; Significance: 2e-49; HSPs: 2)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 185 - 354
Target Start/End: Original strand, 6391 - 6559
Alignment:
Q  185 tggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnn 284  Q
    |||||||||| ||||||||||||||| ||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||         
T  6391 tggcttaattgcacttttggtcctaccattttgatcaactcatgaaaatggtactatcttttttaaatcgaacaaaatcgtccttaaattatatg-tttt 6489  T
Q  285 nngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
      |||||||||||||||||| |||||||| |||| |||||||||| |||||||||||||||| |||||||    
T  6490 ttgcagttttagtcctatcttcctatttccaacttcagaaacgcacagaaatgacagttttattccaacc 6559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 189 - 354
Target Start/End: Complemental strand, 6939 - 6770
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnngc 288  Q
    |||||||| |||||||||||   ||||||||||| | |||||| ||||| ||  | ||||||||||||||||||||| | ||||||| |||       ||    
T  6939 ttaattactcttttggtccttgcattttgaccaatttacgaaattggtcttacatcttttaaatcgaacaaaatcgtacctaaactacatgtttttttgc 6840  T
Q  289 agttttagt----cctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    |||||||||    |||||||||||||||  |||| |||||||||| ||||||||||||||||||||||||    
T  6839 agttttagtcctacctatctccctattttcaactccagaaacgcacagaaatgacagttttagtccaacc 6770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 100; Significance: 2e-49; HSPs: 2)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 185 - 354
Target Start/End: Original strand, 6409 - 6577
Alignment:
Q  185 tggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnn 284  Q
    |||||||||| ||||||||||||||| ||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||         
T  6409 tggcttaattgcacttttggtcctaccattttgatcaactcatgaaaatggtactatcttttttaaatcgaacaaaatcgtccttaaattatatg-tttt 6507  T
Q  285 nngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
      |||||||||||||||||| |||||||| |||| |||||||||| |||||||||||||||| |||||||    
T  6508 ttgcagttttagtcctatcttcctatttccaacttcagaaacgcacagaaatgacagttttattccaacc 6577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 189 - 354
Target Start/End: Complemental strand, 6957 - 6788
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnngc 288  Q
    |||||||| |||||||||||   ||||||||||| | |||||| ||||| ||  | ||||||||||||||||||||| | ||||||| |||       ||    
T  6957 ttaattactcttttggtccttgcattttgaccaatttacgaaattggtcttacatcttttaaatcgaacaaaatcgtacctaaactacatgtttttttgc 6858  T
Q  289 agttttagt----cctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    |||||||||    |||||||||||||||  |||| |||||||||| ||||||||||||||||||||||||    
T  6857 agttttagtcctacctatctccctattttcaactccagaaacgcacagaaatgacagttttagtccaacc 6788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 94; Significance: 8e-46; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 180 - 354
Target Start/End: Complemental strand, 46820 - 46646
Alignment:
Q  180 ttttttggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 279  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||    
T  46820 tttttaggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatatattttaaatcgaacaaaatcgtctttaaactatatg 46721  T
Q  280 nnnnnnngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
           | ||||||||| ||||| ||||||||| |||| || ||||||| | |||||||| |||| ||||||||    
T  46720 tttttttgtagttttagttctatcaccctatttccaactccaaaaacgcacataaatgacaattttggtccaacc 46646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 186 - 354
Target Start/End: Original strand, 46266 - 46434
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnn 285  Q
    ||||||||| |||||||||||||   ||||||||||||| ||||||||||| ||| || ||||||||||||||||||| ||| |||||||||||          
T  46266 ggcttaattgcacttttggtcctcgcattttgaccaacttacgaaaatggttctacctcttttaaatcgaacaaaatcatccctaaactatatgtttttt 46365  T
Q  286 ngcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
     |||||||||||| |||||||||||||| || | || ||| ||| | ||||||||||||||||||||||    
T  46366 tgcagttttagtcatatctccctatttccaattccataaatgcacaaaaatgacagttttagtccaacc 46434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 51; Significance: 4e-20; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 186 - 276
Target Start/End: Complemental strand, 210883 - 210793
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 276  Q
    |||||||||||||||||||||||   ||||||||||||||| ||||||||||||  || ||| ||||||||||||| ||||| ||||||||    
T  210883 ggcttaattacacttttggtcctcacattttgaccaactcatgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactat 210793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 188 - 276
Target Start/End: Complemental strand, 205911 - 205823
Alignment:
Q  188 cttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 276  Q
    ||||||||||||||| |||||   ||||||||||||||||||||||||||||  || ||| ||||||||||||| ||||| ||||||||    
T  205911 cttaattacacttttagtcctcacattttgaccaactcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactat 205823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 276
Target Start/End: Original strand, 204931 - 205018
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 276  Q
    ||||||||||||||||||||  ||||||||||| |||||||  ||||||||  || ||| ||||| |||||||| |||| ||||||||    
T  204931 ttaattacacttttggtccttgtattttgaccagctcacgactatggtccttcctctttcaaatcaaacaaaattgtccctaaactat 205018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 276
Target Start/End: Original strand, 205361 - 205448
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 276  Q
    ||||||||||||||| ||||  ||||||||||| |||||||  ||||||||  || ||| |||||||||||| | |||| ||||||||    
T  205361 ttaattacacttttgatccttgtattttgaccagctcacgactatggtccttcctctttcaaatcgaacaaatttgtccctaaactat 205448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 287 - 354
Target Start/End: Original strand, 78417 - 78484
Alignment:
Q  287 gcagttttagtcctatctccctatttctaactacagaaacgcatagaaatgacagttttagtccaacc 354  Q
    ||||||||||||||||||| ||||||| |||| |||||| |||||||||||||| |||||||||||||    
T  78417 gcagttttagtcctatctctctatttccaactccagaaatgcatagaaatgacaattttagtccaacc 78484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1432 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold1432
Description:

Target: scaffold1432; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 186 - 279
Target Start/End: Complemental strand, 611 - 518
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 279  Q
    |||||||||||||||||| ||||   |||||||| | ||||||||||||||| |  || ||| |||||||||||||  |||  |||||||||||    
T  611 ggcttaattacacttttgatcctcgcattttgacgagctcacgaaaatggtcttgcctctttcaaatcgaacaaaacagtctctaaactatatg 518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 1667 - 1720
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcct 239  Q
    ||||||||||||||||||||||| || ||||| || |||||||||| |||||||    
T  1667 ggcttaattacacttttggtcctcctgttttggcctactcacgaaactggtcct 1720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 276
Target Start/End: Complemental strand, 15645 - 15554
Alignment:
Q  185 tggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 276  Q
    ||||||||||| | ||||||| ||   ||||||| || |||||||||||||||||  || ||| |||||||||||||  |||| ||||||||    
T  15645 tggcttaattagatttttggttctcgcattttgatcagctcacgaaaatggtcctgactctttcaaatcgaacaaaactgtccctaaactat 15554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 231
Target Start/End: Complemental strand, 19171 - 19121
Alignment:
Q  181 tttttggcttaattacacttttggtcctactattttgaccaactcacgaaa 231  Q
    ||||||||||||||||||||||||||||  | ||||| || ||||||||||    
T  19171 tttttggcttaattacacttttggtcctcgtgttttggcctactcacgaaa 19121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 263
Target Start/End: Complemental strand, 62000 - 61926
Alignment:
Q  189 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatc 263  Q
    ||||||||||||||| ||||  | |||||  | ||||||||||||||||||| | |||| |||| ||||||||||    
T  62000 ttaattacacttttgatcctcgtgttttggtctactcacgaaaatggtcctacccttttaaaatagaacaaaatc 61926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 276
Target Start/End: Complemental strand, 159427 - 159337
Alignment:
Q  186 ggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 276  Q
    ||||||||| ||| |||  |||| | ||||| |||  ||||||||||||||| | ||| ||| ||||||||||||||||| | ||||||||    
T  159427 ggcttaattgcacatttaatccttccatttttaccggctcacgaaaatggtcatgtctctttcaaatcgaacaaaatcgttcataaactat 159337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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