View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16533_high_91 (Length: 262)
Name: NF16533_high_91
Description: NF16533
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16533_high_91 |
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Alignment Details
Target: chr7 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 20 - 246
Target Start/End: Complemental strand, 44559901 - 44559675
Alignment:
| Q |
20 |
actctcattttgcaatatgcaaacttgtatgatttgctgtttgcagctatagattaggattaatgtgtcagacatatttctaacaaacagatcttatctg |
119 |
Q |
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| T |
44559901 |
actctcattttgcaatatgcaaacttgtatgatttgctgtttgcagctatagattaggattaatgtgtcagacatatttctaacaaacagatcttatctg |
44559802 |
T |
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| Q |
120 |
aacccctatcgtattaactagttatacaatgaaacaaattcagaaataatccattgcttaatataacttggagcagtattttaggcaatgtttttaaaat |
219 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44559801 |
aacccctatcgtattaactagttatacaatgaaacaaattcagaaataatccattgcttaatataacttggagcagtattttaggcaatgtttttaaaat |
44559702 |
T |
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| Q |
220 |
cggattgaacccgttagttcaaccatt |
246 |
Q |
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|||||||||||||||||||||||||| |
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| T |
44559701 |
tggattgaacccgttagttcaaccatt |
44559675 |
T |
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