View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16533_low_110 (Length: 259)
Name: NF16533_low_110
Description: NF16533
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16533_low_110 |
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Alignment Details
Target: chr1 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 35 - 252
Target Start/End: Original strand, 8073418 - 8073635
Alignment:
| Q |
35 |
aaggagactgaaaagaagattgcacaagtcatttactatgacttgtatcgttcctctttgagtagtataccattcacttgtatacacaaaagaaagagtt |
134 |
Q |
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| T |
8073418 |
aaggagactgaaaagaagattgcacaagtcatttaatatgacttgtatcgttcatctttgagtagtataccattcacttgtatacacaaaagaaagagat |
8073517 |
T |
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| Q |
135 |
tggttccttctcctcatcatggtgctaccatttttcctccttcaacaattgtcaaggctaagatcgatattgatttaataaattttgaccggatactctc |
234 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8073518 |
tggttccttctcctcatcatggtgctaccatttttcctccttcaacaattgtcaaggctaagatcgatattgatttaataaattttgaccggatactctc |
8073617 |
T |
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| Q |
235 |
taatatgtagaataatat |
252 |
Q |
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||||||||||||| |||| |
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| T |
8073618 |
taatatgtagaattatat |
8073635 |
T |
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