View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16533_low_134 (Length: 231)
Name: NF16533_low_134
Description: NF16533
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16533_low_134 |
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Alignment Details
Target: chr5 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 22 - 216
Target Start/End: Original strand, 43408095 - 43408289
Alignment:
| Q |
22 |
aatggaatgcactgctccagcagcaaatcatgatgatcagcaggaaagtggttttgttgttgggaagagatggtggattgggcctagggcaaatccaggt |
121 |
Q |
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| T |
43408095 |
aatggaatgcactgctccagcagcaaatcatgatgatcagcaggaaagtggttttgttgttgggaagagatggtggattgggcctagggcaaatccaggt |
43408194 |
T |
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| Q |
122 |
ccaacaacatctgtcaaagaaagattagtggttgctgttggttacttaaaagagtacacaaagaactcatccaacaacgtccttattcagatatg |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43408195 |
ccaacaacatctgtcaaagaaagattagtggttgctgttggttacttaaaagagtacacaaagaactcatccaacaacgtccttattcagatatg |
43408289 |
T |
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