View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16533_low_148 (Length: 212)

Name: NF16533_low_148
Description: NF16533
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16533_low_148
NF16533_low_148
[»] chr1 (36 HSPs)
chr1 (1-192)||(7889531-7889722)
chr1 (17-62)||(4051246-4051291)
chr1 (17-62)||(42867505-42867550)
chr1 (17-61)||(8760023-8760067)
chr1 (21-59)||(8887574-8887612)
chr1 (21-62)||(91545-91586)
chr1 (17-62)||(3751550-3751595)
chr1 (17-62)||(4761360-4761405)
chr1 (17-62)||(5186627-5186672)
chr1 (17-62)||(6401865-6401910)
chr1 (21-62)||(8785964-8786005)
chr1 (17-62)||(14420757-14420802)
chr1 (17-62)||(15369201-15369246)
chr1 (17-62)||(16987970-16988015)
chr1 (17-62)||(19910813-19910858)
chr1 (17-62)||(21701357-21701402)
chr1 (17-62)||(24972819-24972864)
chr1 (21-62)||(26618901-26618942)
chr1 (17-62)||(28334774-28334819)
chr1 (17-62)||(33056230-33056275)
chr1 (17-62)||(33524072-33524117)
chr1 (21-62)||(33826159-33826200)
chr1 (21-62)||(33826214-33826255)
chr1 (21-62)||(33879233-33879274)
chr1 (17-62)||(35373880-35373925)
chr1 (17-62)||(40434549-40434594)
chr1 (17-62)||(44778645-44778690)
chr1 (17-62)||(47310130-47310175)
chr1 (21-61)||(7236902-7236942)
chr1 (18-62)||(8231675-8231719)
chr1 (21-61)||(12300537-12300577)
chr1 (6-62)||(12300592-12300648)
chr1 (17-61)||(20754576-20754620)
chr1 (25-82)||(35153025-35153084)
chr1 (21-61)||(41885256-41885296)
chr1 (21-61)||(46947692-46947732)
[»] scaffold0076 (1 HSPs)
scaffold0076 (17-62)||(16791-16836)
[»] chr8 (31 HSPs)
chr8 (17-62)||(8138619-8138664)
chr8 (21-62)||(8878594-8878635)
chr8 (17-56)||(26534119-26534158)
chr8 (17-56)||(40666123-40666162)
chr8 (15-61)||(13013204-13013250)
chr8 (21-62)||(10605673-10605714)
chr8 (17-62)||(11096889-11096934)
chr8 (17-62)||(11735393-11735438)
chr8 (17-62)||(14395511-14395556)
chr8 (17-62)||(16593352-16593397)
chr8 (17-62)||(17950654-17950699)
chr8 (17-62)||(18252671-18252716)
chr8 (21-62)||(19164602-19164643)
chr8 (21-62)||(22199880-22199921)
chr8 (17-62)||(22270602-22270647)
chr8 (17-62)||(26063572-26063617)
chr8 (21-62)||(26151314-26151355)
chr8 (17-62)||(35575137-35575182)
chr8 (21-62)||(37529544-37529585)
chr8 (21-62)||(38656378-38656419)
chr8 (21-62)||(40668634-40668675)
chr8 (17-62)||(43536015-43536060)
chr8 (17-62)||(44724446-44724491)
chr8 (17-62)||(45434699-45434744)
chr8 (21-61)||(1770083-1770123)
chr8 (22-62)||(14148603-14148643)
chr8 (18-62)||(26544067-26544111)
chr8 (22-62)||(33316469-33316509)
chr8 (6-62)||(34114953-34115009)
chr8 (21-61)||(40668690-40668730)
chr8 (21-81)||(42309651-42309710)
[»] chr7 (22 HSPs)
chr7 (21-62)||(31662661-31662702)
chr7 (17-62)||(47272850-47272895)
chr7 (25-56)||(3730719-3730750)
chr7 (17-62)||(1730573-1730618)
chr7 (15-56)||(1870774-1870815)
chr7 (21-62)||(2394179-2394220)
chr7 (17-62)||(2443496-2443541)
chr7 (17-62)||(3671111-3671156)
chr7 (17-62)||(13471782-13471827)
chr7 (17-62)||(19228479-19228524)
chr7 (17-62)||(20347173-20347218)
chr7 (17-62)||(26157684-26157729)
chr7 (17-62)||(26760564-26760609)
chr7 (21-62)||(27613537-27613578)
chr7 (17-62)||(32456987-32457032)
chr7 (17-62)||(43725818-43725863)
chr7 (21-53)||(2208747-2208779)
chr7 (21-61)||(21973713-21973753)
chr7 (6-62)||(21973768-21973824)
chr7 (22-62)||(31662607-31662647)
chr7 (22-62)||(37312200-37312240)
chr7 (21-61)||(48154294-48154334)
[»] chr6 (11 HSPs)
chr6 (21-62)||(34188041-34188082)
chr6 (17-63)||(13648778-13648824)
chr6 (17-62)||(7269044-7269089)
chr6 (17-62)||(8677898-8677943)
chr6 (21-62)||(9373166-9373207)
chr6 (17-62)||(9550489-9550534)
chr6 (17-62)||(19680651-19680696)
chr6 (17-62)||(32245127-32245172)
chr6 (21-61)||(7575939-7575979)
chr6 (21-61)||(17545135-17545175)
chr6 (22-62)||(30756762-30756802)
[»] chr5 (27 HSPs)
chr5 (17-62)||(22030617-22030662)
chr5 (17-62)||(35169619-35169664)
chr5 (20-62)||(5234680-5234722)
chr5 (17-62)||(292264-292309)
chr5 (17-62)||(2172684-2172729)
chr5 (17-62)||(3971724-3971769)
chr5 (17-62)||(11092570-11092615)
chr5 (17-62)||(12444443-12444488)
chr5 (17-62)||(14322880-14322925)
chr5 (17-62)||(16425068-16425113)
chr5 (17-62)||(16939656-16939701)
chr5 (17-62)||(21021649-21021694)
chr5 (17-62)||(26020093-26020138)
chr5 (21-62)||(30888977-30889018)
chr5 (17-62)||(30896448-30896493)
chr5 (17-62)||(31109986-31110031)
chr5 (17-62)||(31124715-31124760)
chr5 (17-62)||(31703675-31703720)
chr5 (17-62)||(33686706-33686751)
chr5 (17-62)||(38901251-38901296)
chr5 (21-61)||(6516583-6516623)
chr5 (22-62)||(11875929-11875969)
chr5 (21-61)||(13408140-13408180)
chr5 (25-61)||(19238594-19238630)
chr5 (21-61)||(26402806-26402846)
chr5 (6-62)||(29654140-29654196)
chr5 (22-62)||(41460465-41460505)
[»] chr4 (19 HSPs)
chr4 (17-62)||(48480422-48480467)
chr4 (28-83)||(3728850-3728905)
chr4 (17-62)||(3613997-3614042)
chr4 (17-62)||(8080277-8080322)
chr4 (17-62)||(9370158-9370203)
chr4 (17-62)||(22008215-22008260)
chr4 (17-62)||(22224244-22224289)
chr4 (21-62)||(22422595-22422636)
chr4 (21-62)||(29146023-29146064)
chr4 (17-62)||(30031688-30031733)
chr4 (17-62)||(36703661-36703706)
chr4 (17-62)||(39261665-39261710)
chr4 (17-62)||(44370560-44370605)
chr4 (17-62)||(49013433-49013478)
chr4 (17-62)||(51863929-51863974)
chr4 (21-62)||(52960311-52960352)
chr4 (17-62)||(55811321-55811366)
chr4 (17-81)||(9730182-9730245)
chr4 (22-62)||(54289928-54289968)
[»] chr3 (26 HSPs)
chr3 (21-62)||(46291259-46291300)
chr3 (22-62)||(26256971-26257010)
chr3 (20-62)||(9258897-9258939)
chr3 (17-62)||(9253977-9254022)
chr3 (21-62)||(10177226-10177267)
chr3 (17-62)||(19227878-19227923)
chr3 (17-62)||(21863946-21863991)
chr3 (17-62)||(23550904-23550949)
chr3 (24-61)||(25587967-25588004)
chr3 (17-62)||(30640658-30640703)
chr3 (21-62)||(35105283-35105324)
chr3 (17-62)||(37568591-37568636)
chr3 (21-62)||(37671589-37671630)
chr3 (21-62)||(38098362-38098403)
chr3 (17-62)||(38472404-38472449)
chr3 (21-62)||(39176871-39176912)
chr3 (17-62)||(44808927-44808972)
chr3 (17-62)||(46710486-46710531)
chr3 (21-62)||(47757474-47757515)
chr3 (17-62)||(49083570-49083615)
chr3 (17-62)||(54184568-54184613)
chr3 (17-62)||(54279742-54279787)
chr3 (17-62)||(54617554-54617599)
chr3 (21-61)||(31311089-31311129)
chr3 (21-81)||(42879877-42879937)
chr3 (17-61)||(53277309-53277353)
[»] chr2 (16 HSPs)
chr2 (21-61)||(27251869-27251909)
chr2 (22-61)||(9814988-9815027)
chr2 (15-62)||(18381468-18381515)
chr2 (17-62)||(696447-696492)
chr2 (17-62)||(5612619-5612664)
chr2 (17-62)||(10362302-10362347)
chr2 (17-62)||(12611928-12611973)
chr2 (17-62)||(14391117-14391162)
chr2 (17-62)||(14786739-14786784)
chr2 (17-62)||(34423082-34423127)
chr2 (17-62)||(43942913-43942958)
chr2 (21-62)||(44513029-44513070)
chr2 (21-61)||(1378999-1379039)
chr2 (15-51)||(5168359-5168395)
chr2 (18-62)||(26544537-26544581)
chr2 (6-62)||(27251798-27251854)
[»] scaffold0683 (1 HSPs)
scaffold0683 (17-62)||(3413-3458)
[»] scaffold0196 (1 HSPs)
scaffold0196 (17-62)||(975-1020)
[»] scaffold0111 (1 HSPs)
scaffold0111 (21-62)||(40558-40599)
[»] scaffold0017 (1 HSPs)
scaffold0017 (21-62)||(34586-34627)


Alignment Details
Target: chr1 (Bit Score: 188; Significance: 1e-102; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 7889722 - 7889531
Alignment:
Q  1 atcagtctctccatataaatttagaatttttgaacaaaatatgaattaaatatgaaattttagcgcttaaaatttcatatttttaactttgaaaaattga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7889722 atcagtctctccatataaatttagaatttttgaacaaaatatgaattaaatatgaaattttagcgcttaaaatttcatatttttaactttgaaaaattga 7889623  T
Q  101 gagccaggaggcaggaacccgtttccatatgaacctcaccaccagtggtgtcaacatgcatcctcctaggctgagagccaggatgaaccacc 192  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  7889622 gagccaggaggcaggaacccgtttccatatgaacctcaccactagtggtgtcaacatgcatcctcctaggctgagagccaggatgaaccacc 7889531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 4051291 - 4051246
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||    
T  4051291 aaatttagaattttttaacaaaatatgaatttaatatgaattttta 4051246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 42867550 - 42867505
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||    
T  42867550 aaatttagaattttttaacaaaatatgaatttaatatgaattttta 42867505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 8760067 - 8760023
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttt 61  Q
    ||||||||||||||| ||||||| |||||||||||||||| ||||    
T  8760067 aaatttagaattttttaacaaaacatgaattaaatatgaattttt 8760023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 8887574 - 8887612
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatatgaaatt 59  Q
    ||||||||||| ||||||| |||||||||||||||||||    
T  8887574 ttagaattttttaacaaaacatgaattaaatatgaaatt 8887612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 91586 - 91545
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||| ||||||| |||||||||||||||| |||||    
T  91586 ttagaattttttaacaaaacatgaattaaatatgaattttta 91545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 3751550 - 3751595
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  3751550 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 3751595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 4761360 - 4761405
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| | ||||| |||||||||||||||| |||||    
T  4761360 aaatttagaattttttaccaaaacatgaattaaatatgaattttta 4761405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 5186672 - 5186627
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  5186672 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 5186627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 6401910 - 6401865
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  6401910 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 6401865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 8785964 - 8786005
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||| |||||||||| ||||||||||||| |||||    
T  8785964 ttagaattttttaacaaaatataaattaaatatgaattttta 8786005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 14420802 - 14420757
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  14420802 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 14420757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 15369201 - 15369246
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||| ||||||||||||||||| ||||||| |||||||| |||||    
T  15369201 aaattcagaatttttgaacaaaacatgaatttaatatgaattttta 15369246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 16987970 - 16988015
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  16987970 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 16988015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 19910813 - 19910858
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  19910813 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 19910858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 21701402 - 21701357
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| | ||||| |||||||||||||||| |||||    
T  21701402 aaatttagaattttttaccaaaacatgaattaaatatgaattttta 21701357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 24972864 - 24972819
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  24972864 aaatttagaatttttcaacaaaacatgaatttaatatgaattttta 24972819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 26618942 - 26618901
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||| ||| |||||||||||||||||||||||| |||||    
T  26618942 ttagaatcttttaacaaaatatgaattaaatatgaattttta 26618901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 28334819 - 28334774
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||| ||| ||||||||||||||| |||||||| |||||    
T  28334819 aaatttagaatcttttaacaaaatatgaatttaatatgaattttta 28334774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 33056230 - 33056275
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  33056230 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 33056275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 33524117 - 33524072
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||| ||||||||| ||||||||||||||| |||||||| |||||    
T  33524117 aaattaagaattttttaacaaaatatgaatttaatatgaattttta 33524072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 33826159 - 33826200
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||| ||||||| |||||||||||||||| |||||    
T  33826159 ttagaatttttcaacaaaacatgaattaaatatgaattttta 33826200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 33826255 - 33826214
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||| ||||||| || |||||||||||||||||||    
T  33826255 ttagaattttttaacaaaacataaattaaatatgaaatttta 33826214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 33879233 - 33879274
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||| ||||||| |||||||||||||||| |||||    
T  33879233 ttagaatttttcaacaaaacatgaattaaatatgaattttta 33879274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 35373880 - 35373925
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  35373880 aaatttagaatttttcaacaaaacatgaatttaatatgaattttta 35373925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 40434549 - 40434594
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  40434549 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 40434594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 44778690 - 44778645
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  44778690 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 44778645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 47310130 - 47310175
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  47310130 aaatttagaatttttcaacaaaacatgaatttaatatgaattttta 47310175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 7236942 - 7236902
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatatgaaatttt 61  Q
    ||||||||||| ||||||| |||||||||||||||| ||||    
T  7236942 ttagaattttttaacaaaacatgaattaaatatgaattttt 7236902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 8231675 - 8231719
Alignment:
Q  18 aatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||| || | |||||||||||||||||||||| |||||    
T  8231675 aatttagaattgtttagcaaaatatgaattaaatatgaattttta 8231719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 12300537 - 12300577
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatatgaaatttt 61  Q
    ||||||||||| ||||||| |||||||||||||||| ||||    
T  12300537 ttagaattttttaacaaaacatgaattaaatatgaattttt 12300577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 12300648 - 12300592
Alignment:
Q  6 tctctccatataaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    |||||||| | ||| ||||||||||| | ||||| |||||||||||||||| |||||    
T  12300648 tctctccaaaaaaaattagaattttttaccaaaacatgaattaaatatgaattttta 12300592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 20754620 - 20754576
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttt 61  Q
    |||||| |||||||| ||||||| |||||||||||||||| ||||    
T  20754620 aaattttgaattttttaacaaaacatgaattaaatatgaattttt 20754576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 35153025 - 35153084
Alignment:
Q  25 aatttttgaacaaaatatgaattaaatatgaaatttta--gcgcttaaaatttcatattt 82  Q
    ||||||| ||||||| |||||||||||||||  |||||  ||| ||||||||||||||||    
T  35153025 aattttttaacaaaacatgaattaaatatgattttttattgcggttaaaatttcatattt 35153084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 41885256 - 41885296
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatatgaaatttt 61  Q
    ||||||||||| ||||||| |||||||||||||||| ||||    
T  41885256 ttagaattttttaacaaaacatgaattaaatatgaattttt 41885296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 46947692 - 46947732
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatatgaaatttt 61  Q
    ||||||||||| ||||||| |||||||||||||||| ||||    
T  46947692 ttagaattttttaacaaaacatgaattaaatatgaattttt 46947732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 16791 - 16836
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||    
T  16791 aaatttagaattttttaacaaaatatgaatttaatatgaattttta 16836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000003; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 8138664 - 8138619
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||    
T  8138664 aaatttagaattttttaacaaaatatgaatttaatatgaattttta 8138619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 8878635 - 8878594
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||| ||||||| ||||||||||||||||||||||    
T  8878635 ttagaattttttaacaaaacatgaattaaatatgaaatttta 8878594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 56
Target Start/End: Complemental strand, 26534158 - 26534119
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaa 56  Q
    ||||||||||||||| ||||||||||||||| ||||||||    
T  26534158 aaatttagaattttttaacaaaatatgaatttaatatgaa 26534119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 56
Target Start/End: Original strand, 40666123 - 40666162
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaa 56  Q
    ||||||||||||||| ||||||||||||||| ||||||||    
T  40666123 aaatttagaattttttaacaaaatatgaatttaatatgaa 40666162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 13013250 - 13013204
Alignment:
Q  15 ataaatttagaatttttgaacaaaatatgaattaaatatgaaatttt 61  Q
    ||||| ||||||||||| ||||||| |||||||||||||||| ||||    
T  13013250 ataaaattagaattttttaacaaaacatgaattaaatatgaattttt 13013204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 10605714 - 10605673
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||| ||||||| |||||||||||||||| |||||    
T  10605714 ttagaattttttaacaaaacatgaattaaatatgaattttta 10605673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 11096934 - 11096889
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  11096934 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 11096889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 11735393 - 11735438
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||| ||||||||||||||||| ||||||| |||||||| |||||    
T  11735393 aaattcagaatttttgaacaaaacatgaatttaatatgaattttta 11735438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 14395511 - 14395556
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  14395511 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 14395556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 16593397 - 16593352
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  16593397 aaatttagaatttttcaacaaaacatgaatttaatatgaattttta 16593352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 17950654 - 17950699
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  17950654 aaatttagaatttttcaacaaaacatgaatttaatatgaattttta 17950699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 18252671 - 18252716
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  18252671 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 18252716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 19164602 - 19164643
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||| ||||||| |||||||||||||||| |||||    
T  19164602 ttagaatttttaaacaaaacatgaattaaatatgaattttta 19164643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 22199921 - 22199880
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||| ||||||||||||||| |||||||| |||||    
T  22199921 ttagaattttttaacaaaatatgaatttaatatgaattttta 22199880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 22270647 - 22270602
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||| ||||||||||||||||| ||||||| |||||||| |||||    
T  22270647 aaattcagaatttttgaacaaaacatgaatttaatatgaattttta 22270602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 26063617 - 26063572
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  26063617 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 26063572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 26151314 - 26151355
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||| ||||||| |||||||||||||||| |||||    
T  26151314 ttagaatttttcaacaaaacatgaattaaatatgaattttta 26151355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 35575182 - 35575137
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  35575182 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 35575137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 37529544 - 37529585
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||| ||||||||||||||| |||||||| |||||    
T  37529544 ttagaattttttaacaaaatatgaatttaatatgaattttta 37529585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 38656419 - 38656378
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||| ||||||| |||||||||||||||| |||||    
T  38656419 ttagaattttttaacaaaacatgaattaaatatgaattttta 38656378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 40668634 - 40668675
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||| | |||||||||||||||||||||| |||||    
T  40668634 ttagaattttttaccaaaatatgaattaaatatgaattttta 40668675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 43536015 - 43536060
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  43536015 aaatttagaatttttcaacaaaacatgaatttaatatgaattttta 43536060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 44724491 - 44724446
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  44724491 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 44724446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 45434699 - 45434744
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||| ||||||||| ||||||||||||||| |||||||| |||||    
T  45434699 aaattcagaattttttaacaaaatatgaatttaatatgaattttta 45434744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 1770123 - 1770083
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatatgaaatttt 61  Q
    ||||||||||| ||||||| |||||||||||||||| ||||    
T  1770123 ttagaattttttaacaaaacatgaattaaatatgaattttt 1770083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 14148603 - 14148643
Alignment:
Q  22 tagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    |||||||||| ||||||| |||||||||||||||| |||||    
T  14148603 tagaattttttaacaaaacatgaattaaatatgaattttta 14148643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 26544067 - 26544111
Alignment:
Q  18 aatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    |||||||||||||| ||||||| ||||||| |||||||| |||||    
T  26544067 aatttagaattttttaacaaaacatgaatttaatatgaattttta 26544111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 33316509 - 33316469
Alignment:
Q  22 tagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    |||||||||| | |||||||||||||||||||||| |||||    
T  33316509 tagaattttttaccaaaatatgaattaaatatgaattttta 33316469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 34115009 - 34114953
Alignment:
Q  6 tctctccatataaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    |||||||| | ||| ||||||||||| ||||||| ||||||| |||||||| |||||    
T  34115009 tctctccaaaaaaaattagaattttttaacaaaacatgaatttaatatgaattttta 34114953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 40668730 - 40668690
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatatgaaatttt 61  Q
    ||||||||||| ||||||| |||||||||||||||| ||||    
T  40668730 ttagaattttttaacaaaacatgaattaaatatgaattttt 40668690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 42309651 - 42309710
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatatgaaattttagcgcttaaaatttcatatt 81  Q
    ||||||||||| ||||||| ||||||| |||||||| ||||| || |||||| ||||||||    
T  42309651 ttagaattttttaacaaaacatgaatttaatatgaattttta-cggttaaaaattcatatt 42309710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000003; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 31662702 - 31662661
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||| ||||||||||||||||||||||||| ||||    
T  31662702 ttagaatttttcaacaaaatatgaattaaatatgaaacttta 31662661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 47272850 - 47272895
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||||| ||||| |||||||||||||||| |||||    
T  47272850 aaatttagaatttttgaccaaaacatgaattaaatatgaattttta 47272895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 56
Target Start/End: Original strand, 3730719 - 3730750
Alignment:
Q  25 aatttttgaacaaaatatgaattaaatatgaa 56  Q
    ||||||||||||||||||||||||||||||||    
T  3730719 aatttttgaacaaaatatgaattaaatatgaa 3730750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 1730618 - 1730573
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| | ||||| |||||||||||||||| |||||    
T  1730618 aaatttagaattttttaccaaaacatgaattaaatatgaattttta 1730573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 1870815 - 1870774
Alignment:
Q  15 ataaatttagaatttttgaacaaaatatgaattaaatatgaa 56  Q
    ||||| ||||||||||| ||||||||||||||| ||||||||    
T  1870815 ataaaattagaattttttaacaaaatatgaatttaatatgaa 1870774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 2394179 - 2394220
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||| ||||||| |||||||||||||||| |||||    
T  2394179 ttagaattttttaacaaaacatgaattaaatatgaattttta 2394220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 2443541 - 2443496
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||||||||||| || |||| |||||||| |||||    
T  2443541 aaatttagaatttttgaacaaaacataaatttaatatgaattttta 2443496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 3671111 - 3671156
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  3671111 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 3671156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 13471827 - 13471782
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  13471827 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 13471782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 19228479 - 19228524
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  19228479 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 19228524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 20347218 - 20347173
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| || |||| ||||||||||||||    
T  20347218 aaatttagaattttttaacaaaacataaatttaatatgaaatttta 20347173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 26157684 - 26157729
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  26157684 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 26157729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 26760564 - 26760609
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||||||||||| ||||| || |||||    
T  26760564 aaatttagaattttttaacaaaatatgaatttaatataaattttta 26760609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 27613537 - 27613578
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||| ||| ||| ||||||||||||||||||||||    
T  27613537 ttagaattttttaacgaaagatgaattaaatatgaaatttta 27613578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 32457032 - 32456987
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| |||||||||| |||| |||||||| |||||    
T  32457032 aaatttagaattttttaacaaaatataaatttaatatgaattttta 32456987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 43725863 - 43725818
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  43725863 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 43725818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 53
Target Start/End: Original strand, 2208747 - 2208779
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatat 53  Q
    ||||||||||| |||||||||||||||||||||    
T  2208747 ttagaattttttaacaaaatatgaattaaatat 2208779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 21973713 - 21973753
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatatgaaatttt 61  Q
    ||||||||||| ||||||| |||||||||||||||| ||||    
T  21973713 ttagaattttttaacaaaacatgaattaaatatgaattttt 21973753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 21973824 - 21973768
Alignment:
Q  6 tctctccatataaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    |||||||| | ||| ||||||||||| | ||||| |||||||||||||||| |||||    
T  21973824 tctctccaaaaaaaattagaattttttaccaaaacatgaattaaatatgaattttta 21973768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 31662607 - 31662647
Alignment:
Q  22 tagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    |||||||||||||||||| |||||||||||| ||| |||||    
T  31662607 tagaatttttgaacaaaacatgaattaaatacgaattttta 31662647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 37312200 - 37312240
Alignment:
Q  22 tagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    |||||||||| |||||||||| ||||||||||||| |||||    
T  37312200 tagaattttttaacaaaatataaattaaatatgaattttta 37312240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 48154334 - 48154294
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatatgaaatttt 61  Q
    ||||||||||| ||||||| |||||||||||||||| ||||    
T  48154334 ttagaattttttaacaaaacatgaattaaatatgaattttt 48154294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000003; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 34188082 - 34188041
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||| |||||||||||||||||||||||| |||||    
T  34188082 ttagaattttttaacaaaatatgaattaaatatgaattttta 34188041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 13648824 - 13648778
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaattttag 63  Q
    ||||||| ||||||| ||||||| |||||||||||||||| ||||||    
T  13648824 aaatttaaaatttttaaacaaaacatgaattaaatatgaatttttag 13648778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 7269089 - 7269044
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| | ||||| |||||||||||||||| |||||    
T  7269089 aaatttagaattttttaccaaaacatgaattaaatatgaattttta 7269044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 8677943 - 8677898
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  8677943 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 8677898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 9373166 - 9373207
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||| |||||||||| ||||||||||||| |||||    
T  9373166 ttagaattttttaacaaaatataaattaaatatgaattttta 9373207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 9550489 - 9550534
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  9550489 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 9550534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 19680651 - 19680696
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  19680651 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 19680696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 32245127 - 32245172
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  32245127 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 32245172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 7575979 - 7575939
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatatgaaatttt 61  Q
    ||||||||||| ||||||| |||||||||||||||| ||||    
T  7575979 ttagaattttttaacaaaacatgaattaaatatgaattttt 7575939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 17545175 - 17545135
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatatgaaatttt 61  Q
    ||||||||||| ||||||| |||||||||||||||| ||||    
T  17545175 ttagaattttttaacaaaacatgaattaaatatgaattttt 17545135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 30756762 - 30756802
Alignment:
Q  22 tagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    |||||||||| ||||||| |||||||||||||||| |||||    
T  30756762 tagaattttttaacaaaacatgaattaaatatgaattttta 30756802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000003; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 22030617 - 22030662
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||    
T  22030617 aaatttagaattttttaacaaaatatgaatttaatatgaattttta 22030662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 35169619 - 35169664
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| ||||||||||||||    
T  35169619 aaatttagaattttttaacaaaacatgaatttaatatgaaatttta 35169664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 5234722 - 5234680
Alignment:
Q  20 tttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    |||||||||||| |||||||||||||||||||| ||| |||||    
T  5234722 tttagaatttttcaacaaaatatgaattaaataagaattttta 5234680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 292309 - 292264
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| | ||||| |||||||||||||||| |||||    
T  292309 aaatttagaattttttaccaaaacatgaattaaatatgaattttta 292264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 2172684 - 2172729
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  2172684 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 2172729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 3971724 - 3971769
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| | ||||| |||||||||||||||| |||||    
T  3971724 aaatttagaattttttaccaaaacatgaattaaatatgaattttta 3971769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 11092570 - 11092615
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  11092570 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 11092615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 12444443 - 12444488
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| | ||||| |||||||||||||||| |||||    
T  12444443 aaatttagaattttttaccaaaacatgaattaaatatgaattttta 12444488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 14322925 - 14322880
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  14322925 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 14322880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 16425068 - 16425113
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  16425068 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 16425113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 16939701 - 16939656
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||| ||||||| |||||||||| ||||||||||||| |||||    
T  16939701 aaatttataattttttaacaaaatataaattaaatatgaattttta 16939656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 21021649 - 21021694
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  21021649 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 21021694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 26020138 - 26020093
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||| ||||||||||||||||| ||||||| |||||||| |||||    
T  26020138 aaattcagaatttttgaacaaaacatgaatttaatatgaattttta 26020093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 30889018 - 30888977
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||| ||||||||||||||| |||||||| |||||    
T  30889018 ttagaattttttaacaaaatatgaatttaatatgaattttta 30888977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 30896493 - 30896448
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  30896493 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 30896448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 31110031 - 31109986
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  31110031 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 31109986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 31124715 - 31124760
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  31124715 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 31124760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 31703675 - 31703720
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  31703675 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 31703720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 33686751 - 33686706
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| | ||||| |||||||||||||||| |||||    
T  33686751 aaatttagaattttttaccaaaacatgaattaaatatgaattttta 33686706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 38901296 - 38901251
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| | ||||| |||||||||||||||| |||||    
T  38901296 aaatttagaattttttaccaaaacatgaattaaatatgaattttta 38901251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 6516623 - 6516583
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatatgaaatttt 61  Q
    ||||||||||| ||||||| |||||||||||||||| ||||    
T  6516623 ttagaattttttaacaaaacatgaattaaatatgaattttt 6516583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 11875969 - 11875929
Alignment:
Q  22 tagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    |||||||||| ||||||| |||||||||||||||| |||||    
T  11875969 tagaattttttaacaaaacatgaattaaatatgaattttta 11875929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 13408140 - 13408180
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatatgaaatttt 61  Q
    ||||||||||| ||||||| |||||||||||||||| ||||    
T  13408140 ttagaattttttaacaaaacatgaattaaatatgaattttt 13408180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 19238630 - 19238594
Alignment:
Q  25 aatttttgaacaaaatatgaattaaatatgaaatttt 61  Q
    ||||||| ||||||| |||||||||||||||||||||    
T  19238630 aattttttaacaaaacatgaattaaatatgaaatttt 19238594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 26402846 - 26402806
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatatgaaatttt 61  Q
    ||||||||||| ||||||| |||||||||||||||| ||||    
T  26402846 ttagaattttttaacaaaacatgaattaaatatgaattttt 26402806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 29654140 - 29654196
Alignment:
Q  6 tctctccatataaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    |||||||| | ||| |||||| |||| ||||||| |||||||||||||||| |||||    
T  29654140 tctctccaaaaaaaattagaaatttttaacaaaacatgaattaaatatgaattttta 29654196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 41460505 - 41460465
Alignment:
Q  22 tagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    |||||||||| ||||||| || |||||||||||||||||||    
T  41460505 tagaattttttaacaaaacataaattaaatatgaaatttta 41460465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000003; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 48480467 - 48480422
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||    
T  48480467 aaatttagaattttttaacaaaatatgaatttaatatgaattttta 48480422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 3728850 - 3728905
Alignment:
Q  28 ttttgaacaaaatatgaattaaatatgaaattttagcgcttaaaatttcatatttt 83  Q
    |||| |||||||||||||| || ||| || |||||||||||||||||| |||||||    
T  3728850 tttttaacaaaatatgaatcaactataaatttttagcgcttaaaattttatatttt 3728905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 3614042 - 3613997
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  3614042 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 3613997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 8080277 - 8080322
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  8080277 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 8080322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 9370158 - 9370203
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  9370158 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 9370203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 22008260 - 22008215
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  22008260 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 22008215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 22224289 - 22224244
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  22224289 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 22224244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 22422595 - 22422636
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||| |||||||||| ||||||||||||| |||||    
T  22422595 ttagaattttttaacaaaatataaattaaatatgaattttta 22422636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 29146023 - 29146064
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||| ||||||| |||||||||||||||| |||||    
T  29146023 ttagaattttttaacaaaacatgaattaaatatgaattttta 29146064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 30031688 - 30031733
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  30031688 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 30031733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 36703706 - 36703661
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  36703706 aaatttagaatttttcaacaaaacatgaatttaatatgaattttta 36703661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 39261710 - 39261665
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  39261710 aaatttagaatttttcaacaaaacatgaatttaatatgaattttta 39261665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 44370605 - 44370560
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| || |||||||||||| |||||||| |||||    
T  44370605 aaatttagaattttttaataaaatatgaatttaatatgaattttta 44370560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 49013433 - 49013478
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| | ||||| |||||||||||||||| |||||    
T  49013433 aaatttagaattttttaccaaaacatgaattaaatatgaattttta 49013478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 51863974 - 51863929
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||  ||||||| ||||||||||||||    
T  51863974 aaatttagaattttttaacaaatcatgaatttaatatgaaatttta 51863929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 52960352 - 52960311
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||| ||| |||||||||||||||||||||||| |||||    
T  52960352 ttagaatattttaacaaaatatgaattaaatatgaattttta 52960311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 55811366 - 55811321
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  55811366 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 55811321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 9730182 - 9730245
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaattttagcgcttaaaatttcatatt 81  Q
    ||||||||||||||| ||||||| ||||||| ||||| || ||||| || |||||| ||||||||    
T  9730182 aaatttagaattttttaacaaaacatgaatttaatatcaattttta-cggttaaaaattcatatt 9730245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 54289968 - 54289928
Alignment:
Q  22 tagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    |||||||||| |||||| ||||||||||||||||| |||||    
T  54289968 tagaattttttaacaaagtatgaattaaatatgaattttta 54289928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000003; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 46291300 - 46291259
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||| ||||||| ||||||||||||||||||||||    
T  46291300 ttagaattttttaacaaaacatgaattaaatatgaaatttta 46291259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 26257010 - 26256971
Alignment:
Q  22 tagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  26257010 tagaattttt-aacaaaatatgaattaaatatgaaatttta 26256971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 9258939 - 9258897
Alignment:
Q  20 tttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    |||||||||||| ||||||||||||||| |||||||| |||||    
T  9258939 tttagaattttttaacaaaatatgaatttaatatgaattttta 9258897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 9253977 - 9254022
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  9253977 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 9254022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 10177267 - 10177226
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||||| | |||||||||||||||| |||||    
T  10177267 ttagaatttttgaacaacacatgaattaaatatgaattttta 10177226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 19227923 - 19227878
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  19227923 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 19227878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 21863991 - 21863946
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  21863991 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 21863946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 23550949 - 23550904
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| | ||||| |||||||||||||||| |||||    
T  23550949 aaatttagaattttttaccaaaacatgaattaaatatgaattttta 23550904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 25587967 - 25588004
Alignment:
Q  24 gaatttttgaacaaaatatgaattaaatatgaaatttt 61  Q
    |||||||| |||||||||||||||||||||||| ||||    
T  25587967 gaattttttaacaaaatatgaattaaatatgaattttt 25588004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 30640658 - 30640703
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  30640658 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 30640703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 35105283 - 35105324
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||| ||||||| ||||||| ||||||||||||||    
T  35105283 ttagaattttttaacaaaacatgaatttaatatgaaatttta 35105324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 37568591 - 37568636
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  37568591 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 37568636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 37671589 - 37671630
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||| ||||||| |||||||||||||||| |||||    
T  37671589 ttagaattttttaacaaaacatgaattaaatatgaattttta 37671630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 38098362 - 38098403
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||| |||||||||| ||||||||||||| |||||    
T  38098362 ttagaattttttaacaaaatataaattaaatatgaattttta 38098403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 38472404 - 38472449
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  38472404 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 38472449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 39176871 - 39176912
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||| ||||||| |||||||||||||||| |||||    
T  39176871 ttagaattttttaacaaaacatgaattaaatatgaattttta 39176912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 44808927 - 44808972
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| |||| || |||||||||||||||| |||||    
T  44808927 aaatttagaattttttaacataaaatgaattaaatatgaattttta 44808972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 46710531 - 46710486
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  46710531 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 46710486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 47757515 - 47757474
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||| |||||||||| ||||||||||||| |||||    
T  47757515 ttagaatttttcaacaaaatataaattaaatatgaattttta 47757474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 49083615 - 49083570
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| | ||||| |||||||||||||||| |||||    
T  49083615 aaatttagaattttttaccaaaacatgaattaaatatgaattttta 49083570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 54184613 - 54184568
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  54184613 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 54184568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 54279787 - 54279742
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  54279787 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 54279742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 54617554 - 54617599
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  54617554 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 54617599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 31311089 - 31311129
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatatgaaatttt 61  Q
    ||||| ||||| ||||||| |||||||||||||||||||||    
T  31311089 ttagatttttttaacaaaacatgaattaaatatgaaatttt 31311129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 42879937 - 42879877
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatatgaaattttagcgcttaaaatttcatatt 81  Q
    ||||||||||| ||||||| ||||||| |||||||| ||||  || |||||| ||||||||    
T  42879937 ttagaattttttaacaaaacatgaatttaatatgaattttttacggttaaaaattcatatt 42879877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 53277353 - 53277309
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttt 61  Q
    ||||||||||||||| ||||||| ||||||| |||||||| ||||    
T  53277353 aaatttagaattttttaacaaaacatgaatttaatatgaattttt 53277309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 33; Significance: 0.000000001; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 27251909 - 27251869
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatatgaaatttt 61  Q
    ||||||||||| ||||||| |||||||||||||||||||||    
T  27251909 ttagaattttttaacaaaacatgaattaaatatgaaatttt 27251869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 61
Target Start/End: Original strand, 9814988 - 9815027
Alignment:
Q  22 tagaatttttgaacaaaatatgaattaaatatgaaatttt 61  Q
    |||||||||  |||||||||||||||||||||||||||||    
T  9814988 tagaattttgtaacaaaatatgaattaaatatgaaatttt 9815027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 18381515 - 18381468
Alignment:
Q  15 ataaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||| ||||||||||| ||||||| |||||||||||||||| |||||    
T  18381515 ataaaattagaattttttaacaaaacatgaattaaatatgaattttta 18381468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 696492 - 696447
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| | ||||| |||||||||||||||| |||||    
T  696492 aaatttagaattttttaccaaaacatgaattaaatatgaattttta 696447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 5612619 - 5612664
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  5612619 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 5612664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 10362347 - 10362302
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  10362347 aaatttagaatttttcaacaaaacatgaatttaatatgaattttta 10362302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 12611973 - 12611928
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| | ||||| |||||||||||||||| |||||    
T  12611973 aaatttagaattttttaccaaaacatgaattaaatatgaattttta 12611928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 14391162 - 14391117
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||| ||||||||||||||||| ||||||| |||||||| |||||    
T  14391162 aaattcagaatttttgaacaaaacatgaatttaatatgaattttta 14391117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 14786784 - 14786739
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  14786784 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 14786739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 34423127 - 34423082
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  34423127 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 34423082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 43942913 - 43942958
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||| ||||||||||||||||| ||||||| |||||||| |||||    
T  43942913 aaattcagaatttttgaacaaaacatgaatttaatatgaattttta 43942958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 44513070 - 44513029
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||| |||||||||||| ||||||||||| |||||    
T  44513070 ttagaattttttaacaaaatatgagttaaatatgaattttta 44513029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 1379039 - 1378999
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatatgaaatttt 61  Q
    ||||||||||| ||||||| |||||||||||||||| ||||    
T  1379039 ttagaattttttaacaaaacatgaattaaatatgaattttt 1378999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 5168395 - 5168359
Alignment:
Q  15 ataaatttagaatttttgaacaaaatatgaattaaat 51  Q
    ||||||||||||| ||| |||||||||||||||||||    
T  5168395 ataaatttagaatattttaacaaaatatgaattaaat 5168359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 26544537 - 26544581
Alignment:
Q  18 aatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    |||||||||||||| ||||||| ||||||| |||||||| |||||    
T  26544537 aatttagaatttttcaacaaaacatgaatttaatatgaattttta 26544581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 27251798 - 27251854
Alignment:
Q  6 tctctccatataaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    |||||||| | ||| ||||||||||| | ||||| |||||||||||||||| |||||    
T  27251798 tctctccaaaaaaaattagaattttttaccaaaacatgaattaaatatgaattttta 27251854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0683 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0683
Description:

Target: scaffold0683; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 3413 - 3458
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| | ||||| |||||||||||||||| |||||    
T  3413 aaatttagaattttttatcaaaacatgaattaaatatgaattttta 3458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0196 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0196
Description:

Target: scaffold0196; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 1020 - 975
Alignment:
Q  17 aaatttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||    
T  1020 aaatttagaattttttaacaaaacatgaatttaatatgaattttta 975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 40558 - 40599
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||||||||||| ||||||| |||||||| |||||    
T  40558 ttagaatttttgaacaaaacatgaatttaatatgaattttta 40599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 34627 - 34586
Alignment:
Q  21 ttagaatttttgaacaaaatatgaattaaatatgaaatttta 62  Q
    ||||||||||| ||||||| |||||||||||||||| |||||    
T  34627 ttagaattttttaacaaaacatgaattaaatatgaattttta 34586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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