View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16533_low_149 (Length: 211)
Name: NF16533_low_149
Description: NF16533
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16533_low_149 |
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Alignment Details
Target: chr5 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 18 - 188
Target Start/End: Complemental strand, 16822631 - 16822461
Alignment:
| Q |
18 |
gaacacatacaatacaaagtaaagttaccctacacatcatggaatcgagagggctaaagaacacatgcattatacataaatttgttcccaattaatttgt |
117 |
Q |
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| T |
16822631 |
gaacacatacaatacaaagtaaagttaccctacacatcatggaatcgagagggctaaagaacacatgcattatacataaatttgtccccaattaatttgt |
16822532 |
T |
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| Q |
118 |
aatcaaaataattggtgaatagcttaatttgtatacaacatttagttaggtatacaaatactacagctacc |
188 |
Q |
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| T |
16822531 |
aatcaaaataattggtgaatagcttaatttgtatacaacatttagttaggtatacaaatactacagctacc |
16822461 |
T |
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