View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16533_low_9 (Length: 645)

Name: NF16533_low_9
Description: NF16533
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16533_low_9
NF16533_low_9
[»] chr3 (13 HSPs)
chr3 (277-632)||(46739448-46739801)
chr3 (17-277)||(46739030-46739304)
chr3 (482-602)||(46719696-46719816)
chr3 (485-588)||(26837104-26837207)
chr3 (489-603)||(38741305-38741419)
chr3 (486-583)||(37999503-37999600)
chr3 (481-563)||(43104464-43104546)
chr3 (485-549)||(15450263-15450326)
chr3 (485-561)||(38337412-38337487)
chr3 (481-552)||(52398972-52399042)
chr3 (481-554)||(40819735-40819808)
chr3 (506-550)||(32490004-32490048)
chr3 (506-550)||(52491944-52491988)
[»] scaffold0180 (1 HSPs)
scaffold0180 (446-637)||(22950-23142)
[»] chr6 (7 HSPs)
chr6 (485-604)||(18605039-18605158)
chr6 (491-614)||(930968-931092)
chr6 (485-614)||(10608200-10608330)
chr6 (485-589)||(28534803-28534907)
chr6 (489-585)||(1034763-1034859)
chr6 (508-585)||(9428033-9428110)
chr6 (506-550)||(33018225-33018269)
[»] chr1 (9 HSPs)
chr1 (485-604)||(32538394-32538513)
chr1 (481-602)||(49611453-49611574)
chr1 (485-583)||(48686081-48686177)
chr1 (506-558)||(6076032-6076084)
chr1 (485-561)||(31788211-31788286)
chr1 (499-583)||(37689065-37689148)
chr1 (485-554)||(38618268-38618336)
chr1 (485-561)||(14924712-14924787)
chr1 (485-561)||(14925277-14925352)
[»] chr8 (11 HSPs)
chr8 (489-605)||(30272140-30272256)
chr8 (485-585)||(41348182-41348282)
chr8 (485-583)||(35759151-35759249)
chr8 (485-604)||(41092210-41092330)
chr8 (491-596)||(36935675-36935780)
chr8 (485-614)||(42573617-42573745)
chr8 (489-576)||(42111556-42111643)
chr8 (490-580)||(35387381-35387470)
chr8 (485-561)||(43924528-43924603)
chr8 (485-561)||(43924953-43925028)
chr8 (486-561)||(43972021-43972095)
[»] chr4 (18 HSPs)
chr4 (485-605)||(53289511-53289631)
chr4 (489-604)||(39413513-39413628)
chr4 (485-614)||(11680314-11680444)
chr4 (485-614)||(11688593-11688723)
chr4 (485-614)||(12590083-12590213)
chr4 (485-614)||(25655519-25655649)
chr4 (482-602)||(52758603-52758723)
chr4 (485-614)||(46764290-46764420)
chr4 (491-599)||(3619042-3619150)
chr4 (489-583)||(49399474-49399568)
chr4 (485-589)||(31634141-31634246)
chr4 (499-583)||(7988200-7988280)
chr4 (484-552)||(15481072-15481139)
chr4 (505-561)||(47523276-47523332)
chr4 (504-560)||(54007629-54007685)
chr4 (485-561)||(10421516-10421591)
chr4 (504-560)||(54007537-54007593)
chr4 (505-561)||(6680277-6680333)
[»] chr7 (9 HSPs)
chr7 (485-604)||(41224733-41224853)
chr7 (485-583)||(44896084-44896182)
chr7 (485-604)||(29314619-29314739)
chr7 (485-602)||(33687643-33687760)
chr7 (485-561)||(29007133-29007209)
chr7 (505-577)||(36845121-36845193)
chr7 (524-583)||(32870341-32870396)
chr7 (485-518)||(29006385-29006418)
chr7 (505-561)||(46757481-46757537)
[»] chr5 (4 HSPs)
chr5 (485-609)||(42654873-42654996)
chr5 (506-550)||(8040390-8040434)
chr5 (485-518)||(8320912-8320945)
chr5 (481-514)||(24027668-24027701)
[»] chr2 (17 HSPs)
chr2 (490-585)||(29921446-29921541)
chr2 (485-589)||(5006214-5006318)
chr2 (485-589)||(40992260-40992365)
chr2 (481-554)||(14487964-14488037)
chr2 (485-589)||(16426591-16426696)
chr2 (505-561)||(36476681-36476737)
chr2 (486-561)||(4976440-4976514)
chr2 (486-561)||(4994347-4994421)
chr2 (482-577)||(23875275-23875369)
chr2 (481-519)||(37996560-37996598)
chr2 (485-518)||(6610021-6610054)
chr2 (481-514)||(7994088-7994121)
chr2 (485-518)||(15562018-15562051)
chr2 (506-558)||(4479640-4479692)
chr2 (506-554)||(14573319-14573367)
chr2 (506-550)||(38834445-38834489)
chr2 (506-558)||(42369701-42369753)
[»] scaffold0155 (1 HSPs)
scaffold0155 (485-589)||(17377-17482)
[»] scaffold0069 (1 HSPs)
scaffold0069 (495-589)||(1844-1938)
[»] scaffold0071 (1 HSPs)
scaffold0071 (485-549)||(11865-11928)
[»] scaffold0189 (1 HSPs)
scaffold0189 (485-552)||(12803-12869)
[»] scaffold0129 (1 HSPs)
scaffold0129 (485-544)||(42524-42583)
[»] scaffold0041 (1 HSPs)
scaffold0041 (506-558)||(27279-27331)


Alignment Details
Target: chr3 (Bit Score: 259; Significance: 1e-144; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 277 - 632
Target Start/End: Original strand, 46739448 - 46739801
Alignment:
Q  277 agtaaattgagcttcgtggaagatgaatggatttggaatattgatcaatccttgtgtgaggtcttatcaaaaaattccaacccaaaaataatataaatgc 376  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  46739448 agtaaattgagcttcgtgaaagatgaatggatttggaatattgatcaatccttgtgtgaggtcttatcaaaaaattccaacccaaaaataatctaaatgc 46739547  T
Q  377 ggggcatgagaagaggtttgagaaacctgtgggaatctctcaaaaa-ggaaatccttcatggcgataaagtgggtgccatttagcct-ggaatgtctagn 474  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||     
T  46739548 ggggcatgagaagaggtttgagaaacctgtgggaatctctcaaaaagggaaatccttcatggcgataaagtgggtgccatttagcctgggaatgtctagt 46739647  T
Q  475 nnnnnnccatcatgggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaatttttgtcacatcatctt 574  Q
          |    ||||||||||||| |||||||||||  ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  46739648 tttttcc---tatgggaaagttag-tttgaaccatttaattaaatagggaacataatttcatcatggtctctcaacactaaatttttgtcacatcatctt 46739743  T
Q  575 ccaccaccacccttctcccctacctttgtgtgtttccctcaactgtaattgtggcttc 632  Q
    ||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||    
T  46739744 ccaccaccacccttctcccatacctttgtgcatttccctcaactgtaattgtggcttc 46739801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 17 - 277
Target Start/End: Original strand, 46739030 - 46739304
Alignment:
Q  17 aggattaaagattggttttttgcgttggctaagnnnnnnnnn--tgggaatgaggaagctacttccttttgccttgatccatggctaacaaa-tttgcta 113  Q
    |||||||||||||||||||||| ||||||||||           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  46739030 aggattaaagattggttttttgagttggctaagaaaaaaaaaaatgggaatgaggaagctacttccttttgccttgatccatggctaacaaaatttgcta 46739129  T
Q  114 caaagcaaaatgtttccaaggatttttgctatgtcgatt-nnnnnnnnccttctattagtgagaaagggagagtaatggatcggtcttgggagagaga-- 210  Q
    |||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||    ||||      
T  46739130 caaagcaaaatgtttccaaggatttttgctatgtcgattaaaaaaaaaccttctattagtgagaaagggagagtaatggatcggtcttggtgttgagact 46739229  T
Q  211 --------gggagaaatttctttgaattagagctacaattattgggtgatttaagggatttaattgacggttgta 277  Q
             |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  46739230 ttaagttgaggagaaatttctttgaattagaactacaattattgggtgatttaagggatttaattgacggctgta 46739304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 482 - 602
Target Start/End: Original strand, 46719696 - 46719816
Alignment:
Q  482 catcatgggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaatttttgtcacatcatcttccaccac 581  Q
    |||||||||||||||||||||   |||||||||||||||||||||| ||||||| ||| ||||||||||| ||||| |||   ||  |||||||||||||    
T  46719696 catcatgggaaagttagtttttggccattagattaaatagggaacacaattttaccatggtctctcaacattaaatattttctaccacatcttccaccac 46719795  T
Q  582 cacccttctcccctacctttg 602  Q
    ||| ||||||||| |||||||    
T  46719796 cactcttctcccccacctttg 46719816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 485 - 588
Target Start/End: Complemental strand, 26837207 - 26837104
Alignment:
Q  485 catgggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaatttttgtcacatcatcttccaccaccac 584  Q
    ||||||||| |||||||| |||||||  ||||| ||||||||| ||||||| ||| ||||||||||||| |||||||  |||||||||||||||||||||    
T  26837207 catgggaaaattagtttttaaccattgaattaagtagggaacaaaattttaccatggtctctcaacactcaattttttccacatcatcttccaccaccac 26837108  T
Q  585 cctt 588  Q
    ||||    
T  26837107 cctt 26837104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 489 - 603
Target Start/End: Original strand, 38741305 - 38741419
Alignment:
Q  489 ggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaatttttgtcacatcatcttccaccaccaccctt 588  Q
    ||||||||||||||   |||||||||||||||||||||| ||||||| ||| ||||||||||||||||| |||  |||  ||||||||||||| || |||    
T  38741305 ggaaagttagtttttggccattagattaaatagggaacacaattttaccatggtctctcaacactaaatattttccaccacatcttccaccacgactctt 38741404  T
Q  589 ctcccctacctttgt 603  Q
    |||||| ||||||||    
T  38741405 ctcccccacctttgt 38741419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 486 - 583
Target Start/End: Original strand, 37999503 - 37999600
Alignment:
Q  486 atgggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaatttttgtcacatcatcttccaccacca 583  Q
    ||||||||||||||||| |||||||  ||||| ||||||||| ||||||| |||  |||||||||||| |||||||  ||||||||||||||||||||    
T  37999503 atgggaaagttagtttttaaccattgaattaagtagggaacaaaattttaccatgatctctcaacactcaattttttccacatcatcttccaccacca 37999600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 481 - 563
Target Start/End: Complemental strand, 43104546 - 43104464
Alignment:
Q  481 ccatcatgggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaatttttgt 563  Q
    |||||||||||||||| || || ||||||||||| ||||    || |||||||||||||| |||||| |||||| ||||||||    
T  43104546 ccatcatgggaaagttggtatttaaccattagatcaaatcaataaaataattttatcatactctctccacactagatttttgt 43104464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 485 - 549
Target Start/End: Original strand, 15450263 - 15450326
Alignment:
Q  485 catgggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaa 549  Q
    ||||||||||||| | |||| |||||||||||| ||| ||||||| |||||||||||||| ||||    
T  15450263 catgggaaagttaatcttga-ccattagattaagtagagaacatatttttatcatagtctttcaa 15450326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 485 - 561
Target Start/End: Complemental strand, 38337487 - 38337412
Alignment:
Q  485 catgggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaattttt 561  Q
    |||||||||| || |||||| || ||||||||||||| ||||||| ||||||||||| | |||||||| | ||||||    
T  38337487 catgggaaagctaattttga-ccgttagattaaatagagaacatatttttatcatagacactcaacaccagattttt 38337412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 481 - 552
Target Start/End: Complemental strand, 52399042 - 52398972
Alignment:
Q  481 ccatcatgggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacac 552  Q
    ||||||||||||||| | |||||| |||||||||||||||| ||| | | |||||| |||||||| ||||||    
T  52399042 ccatcatgggaaagtaaattttga-ccattagattaaatagagaatacatttttatgatagtctcccaacac 52398972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 481 - 554
Target Start/End: Original strand, 40819735 - 40819808
Alignment:
Q  481 ccatcatgggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacacta 554  Q
    ||||||||||||||||  ||||  |||||||||| ||||| | |||||| | ||||| ||||| ||||||||||    
T  40819735 ccatcatgggaaagttgattttttaccattagatcaaataagaaacatagtcttatcttagtcactcaacacta 40819808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 506 - 550
Target Start/End: Original strand, 32490004 - 32490048
Alignment:
Q  506 ccattagattaaatagggaacataattttatcatagtctctcaac 550  Q
    ||||||||||||||| |||||||| || ||||||| |||||||||    
T  32490004 ccattagattaaataaggaacatatttctatcatactctctcaac 32490048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 506 - 550
Target Start/End: Original strand, 52491944 - 52491988
Alignment:
Q  506 ccattagattaaatagggaacataattttatcatagtctctcaac 550  Q
    ||||||||||||||| |||||||| || ||||||| |||||||||    
T  52491944 ccattagattaaataaggaacatatttctatcatactctctcaac 52491988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 144; Significance: 2e-75; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 446 - 637
Target Start/End: Complemental strand, 23142 - 22950
Alignment:
Q  446 tgggtgccatttagcctgg-aatgtctagnnnnnnnccatcatgggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtct 544  Q
    ||||||||||||||||||| |||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  23142 tgggtgccatttagcctgggaatgtctagttttttcccatcatgggaaagttagttttgaaccattagattaaatagggaacataattttatcatggtct 23043  T
Q  545 ctcaacactaaatttttgtcacatcatcttccaccaccacccttctcccctacctttgtgtgtttccctcaactgtaattgtggcttcatctc 637  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||||| ||||    
T  23042 ctcaacactaaatttttgtcacatcatcttccaccaccacccttctctcctacctttgtgcgttttcctcaactgtaattgtggcttcttctc 22950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 8e-35; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 485 - 604
Target Start/End: Original strand, 18605039 - 18605158
Alignment:
Q  485 catgggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaatttttgtcacatcatcttccaccaccac 584  Q
    ||||||||||||| |||| |||||||  ||||| ||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||| |||||     
T  18605039 catgggaaagttaatttttaaccattgaattaagtagggaacataattttatcatggtctctcaacactaaattttttccacatcatcttccatcaccaa 18605138  T
Q  585 ccttctcccctacctttgtg 604  Q
    ||||||||||| ||||||||    
T  18605139 ccttctccccttcctttgtg 18605158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 491 - 614
Target Start/End: Original strand, 930968 - 931092
Alignment:
Q  491 aaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaatttttgtcacatcatcttccaccaccacccttct 590  Q
    ||||||||||||  ||||||||||||||||||||||| ||| |||| || ||||||||||||||||| |||   ||||||||||||||||||||||||||    
T  930968 aaagttagtttttgaccattagattaaatagggaacacaatgttattatggtctctcaacactaaatctttccaacatcatcttccaccaccacccttct 931067  T
Q  591 -cccctacctttgtgtgtttccctc 614  Q
     ||||||||||||||| ||| ||||    
T  931068 ccccctacctttgtgtcttttcctc 931092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 485 - 614
Target Start/End: Complemental strand, 10608330 - 10608200
Alignment:
Q  485 catgggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaatttttgtcacatcatcttccaccaccac 584  Q
    ||||||||||||||||||  ||||||||||||||||||||||| ||| |||| || |||||||| ||||| || |||  |||||||||||||||||||||    
T  10608330 catgggaaagttagtttttgaccattagattaaatagggaacacaatgttattatggtctctcagcactagatcttttccacatcatcttccaccaccac 10608231  T
Q  585 ccttct-cccctacctttgtgtgtttccctc 614  Q
    |||||| ||||||| ||||||| ||| ||||    
T  10608230 ccttctccccctacatttgtgtattttcctc 10608200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 485 - 589
Target Start/End: Original strand, 28534803 - 28534907
Alignment:
Q  485 catgggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaatttttgtcacatcatcttccaccaccac 584  Q
    |||||||| ||||||||| ||| ||| |||||||||||||||| ||||||| ||||||||||||||||| |||||||  ||||||||||||||||||||     
T  28534803 catgggaaggttagtttttaactattggattaaatagggaacaaaattttaccatagtctctcaacactcaattttttccacatcatcttccaccaccaa 28534902  T
Q  585 ccttc 589  Q
    |||||    
T  28534903 ccttc 28534907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 489 - 585
Target Start/End: Original strand, 1034763 - 1034859
Alignment:
Q  489 ggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaatttttgtcacatcatcttccaccaccacc 585  Q
    |||||||||||||| |||||||||||||||||||| ||| |||||||||||  ||||||||||  ||||||||  ||||||||||||||||||||||    
T  1034763 ggaaagttagtttttaaccattagattaaatagggtacacaattttatcatgatctctcaacatcaaatttttcccacatcatcttccaccaccacc 1034859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 508 - 585
Target Start/End: Complemental strand, 9428110 - 9428033
Alignment:
Q  508 attagattaaatagggaacataattttatcatagtctctcaacactaaatttttgtcacatcatcttccaccaccacc 585  Q
    ||||||||||||| || ||||||||||||| |  |||||||||| ||||||||   ||||||||||||||||||||||    
T  9428110 attagattaaatatggtacataattttatcgtgatctctcaacattaaattttccccacatcatcttccaccaccacc 9428033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 506 - 550
Target Start/End: Original strand, 33018225 - 33018269
Alignment:
Q  506 ccattagattaaatagggaacataattttatcatagtctctcaac 550  Q
    ||||||||||||||  |||||||| |||||||||| |||||||||    
T  33018225 ccattagattaaatgaggaacatatttttatcatactctctcaac 33018269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 8e-35; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 485 - 604
Target Start/End: Complemental strand, 32538513 - 32538394
Alignment:
Q  485 catgggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaatttttgtcacatcatcttccaccaccac 584  Q
    ||||| |||||||||||| |||||||  ||||| ||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||| |||||     
T  32538513 catggaaaagttagtttttaaccattgaattaagtagggaacataatgttatcatggtctctcaacactaaatttttttcacatcatcttccatcaccaa 32538414  T
Q  585 ccttctcccctacctttgtg 604  Q
    ||||||||||| ||||||||    
T  32538413 ccttctccccttcctttgtg 32538394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 481 - 602
Target Start/End: Complemental strand, 49611574 - 49611453
Alignment:
Q  481 ccatcatgggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaatttttgtcacatcatcttccacca 580  Q
    ||||||||||||| ||||||||   |||||||||||||||||||||| ||||||| ||| ||||||||||||||||| |||  |||  ||||||||||||    
T  49611574 ccatcatgggaaaattagtttttggccattagattaaatagggaacacaattttaccatggtctctcaacactaaatattttccaccacatcttccacca 49611475  T
Q  581 ccacccttctcccctacctttg 602  Q
    |||| ||||||||| |||||||    
T  49611474 ccactcttctcccccacctttg 49611453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 485 - 583
Target Start/End: Complemental strand, 48686177 - 48686081
Alignment:
Q  485 catgggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaatttttgtcacatcatcttccaccacca 583  Q
    ||||||||||||  ||||| ||||||||||||| || |||||||||| |||| ||||||||||||||||| | |||| ||||| |||||||||||||||    
T  48686177 catgggaaagttt-ttttggaccattagattaagtaaggaacataatattataatagtctctcaacactata-ttttctcacaccatcttccaccacca 48686081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 506 - 558
Target Start/End: Original strand, 6076032 - 6076084
Alignment:
Q  506 ccattagattaaatagggaacataattttatcatagtctctcaacactaaatt 558  Q
    ||||||||||||||  |||| | | ||||||||||||||||||||||||||||    
T  6076032 ccattagattaaatgaggaatacatttttatcatagtctctcaacactaaatt 6076084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 485 - 561
Target Start/End: Complemental strand, 31788286 - 31788211
Alignment:
Q  485 catgggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaattttt 561  Q
    ||||||||||||| |||| ||||||||||| |||||| ||||||| ||||| ||||| | |||||||| | ||||||    
T  31788286 catgggaaagttaatttt-aaccattagataaaatagagaacatacttttaccatagacactcaacaccagattttt 31788211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 499 - 583
Target Start/End: Complemental strand, 37689148 - 37689065
Alignment:
Q  499 ttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaatttttgtcacatcatcttccaccacca 583  Q
    ||||| || |||||||||| || |||||||||| |||| |||||||||||||| || | |||| ||||| |||| ||||||||||    
T  37689148 ttttggactattagattaagtaaggaacataatattataatagtctctcaacattata-ttttctcacaccatcctccaccacca 37689065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 485 - 554
Target Start/End: Original strand, 38618268 - 38618336
Alignment:
Q  485 catgggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacacta 554  Q
    |||||||||||||  ||||| |||||||||||| ||| ||||| | | ||||||||| ||||||||||||    
T  38618268 catgggaaagttaagtttga-ccattagattaagtagtgaacacattcttatcatagactctcaacacta 38618336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 485 - 561
Target Start/End: Original strand, 14924712 - 14924787
Alignment:
Q  485 catgggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaattttt 561  Q
    |||||||||| || |||||| || ||| ||||||||| ||||||| ||||||||||| | |||||||| | ||||||    
T  14924712 catgggaaagctaattttga-ccgttaaattaaatagagaacatatttttatcatagacactcaacaccagattttt 14924787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 485 - 561
Target Start/End: Complemental strand, 14925352 - 14925277
Alignment:
Q  485 catgggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaattttt 561  Q
    |||||||||| || |||||| ||||||||| || ||| ||||||| ||||||||||| | |||||||| | ||||||    
T  14925352 catgggaaagctaattttga-ccattagataaactagagaacatacttttatcatagacactcaacaccagattttt 14925277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 5e-33; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 489 - 605
Target Start/End: Original strand, 30272140 - 30272256
Alignment:
Q  489 ggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaatttttgtcacatcatcttccaccaccaccctt 588  Q
    ||||||||| |||| |||||||||||||||||||| ||| |||||||| ||  ||||||||||  ||||||||  |||||||||||||||||||||||||    
T  30272140 ggaaagttaatttttaaccattagattaaatagggtacacaattttattatgatctctcaacatcaaattttttccacatcatcttccaccaccaccctt 30272239  T
Q  589 ctcccctacctttgtgt 605  Q
    |||||||||||||||||    
T  30272240 ctcccctacctttgtgt 30272256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 485 - 585
Target Start/End: Original strand, 41348182 - 41348282
Alignment:
Q  485 catgggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaatttttgtcacatcatcttccaccaccac 584  Q
    |||||||||||||||||| |||||||||||||||||||| ||| ||||||||||| |||||||||||  ||||||||  |||||||||||||||||||||    
T  41348182 catgggaaagttagtttttaaccattagattaaatagggtacacaattttatcatggtctctcaacatcaaatttttcccacatcatcttccaccaccac 41348281  T
Q  585 c 585  Q
    |    
T  41348282 c 41348282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 485 - 583
Target Start/End: Complemental strand, 35759249 - 35759151
Alignment:
Q  485 catgggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaatttttgtcacatcatcttccaccacca 583  Q
    |||||||||||||||||| |||||||||||||||||||| ||| ||||||||||| |||||||||||  ||||||||  ||||||||||||||||||||    
T  35759249 catgggaaagttagtttttaaccattagattaaatagggtacacaattttatcatggtctctcaacatcaaatttttcccacatcatcttccaccacca 35759151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 485 - 604
Target Start/End: Original strand, 41092210 - 41092330
Alignment:
Q  485 catgggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaatttttgtc-acatcatcttccaccacca 583  Q
    ||||| |||||||||||| ||||||| |||||||||||||||| ||||||||||| |||| |||||||   |||||| ||  ||||||||||||||||||    
T  41092210 catggaaaagttagtttttaaccatttgattaaatagggaacacaattttatcatggtctttcaacacactatttttttcttcatcatcttccaccacca 41092309  T
Q  584 cccttctcccctacctttgtg 604  Q
     ||||||||||||||||||||    
T  41092310 tccttctcccctacctttgtg 41092330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 491 - 596
Target Start/End: Original strand, 36935675 - 36935780
Alignment:
Q  491 aaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaatttttgtcacatcatcttccaccaccacccttct 590  Q
    ||||||| |||| ||  |||||||||||||||| ||| |||||||||||  ||||||||||  ||||||||  |||||||||||||||||||||||||||    
T  36935675 aaagttaatttttaataattagattaaatagggtacacaattttatcatgatctctcaacatcaaattttttccacatcatcttccaccaccacccttct 36935774  T
Q  591 ccccta 596  Q
    ||||||    
T  36935775 ccccta 36935780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 485 - 614
Target Start/End: Original strand, 42573617 - 42573745
Alignment:
Q  485 catgggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaatttttgtcacatcatcttccaccaccac 584  Q
    |||| |||| ||||||||  ||||||| |||||||||||||||  || |||| |||||||||||||| ||||| |||  |||||||||||||||||||||    
T  42573617 catgagaaaattagtttttgaccattaaattaaatagggaacacgatgttattatagtctctcaacattaaatctttcccacatcatcttccaccaccac 42573716  T
Q  585 ccttctcccctacctttgtgtgtttccctc 614  Q
    ||||| ||| ||||||||||| ||| ||||    
T  42573717 ccttc-cccttacctttgtgtcttttcctc 42573745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 489 - 576
Target Start/End: Original strand, 42111556 - 42111643
Alignment:
Q  489 ggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaatttttgtcacatcatcttcc 576  Q
    ||||||||||||||  ||||||| |||| |||||||| ||||||||||||| |||||||||||||| ||||||  |||||||||||||    
T  42111556 ggaaagttagtttttgaccattaaattagatagggaatataattttatcatggtctctcaacactacattttttccacatcatcttcc 42111643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 490 - 580
Target Start/End: Complemental strand, 35387470 - 35387381
Alignment:
Q  490 gaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaatttttgtcacatcatcttccacca 580  Q
    |||||||||||||  |||||| ||||| ||||| |||| | ||||||||| ||||||||| |||| ||||||| |||||||||||||||||    
T  35387470 gaaagttagtttttgaccatttgattagataggaaacacacttttatcat-gtctctcaatactacatttttgccacatcatcttccacca 35387381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 485 - 561
Target Start/End: Original strand, 43924528 - 43924603
Alignment:
Q  485 catgggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaattttt 561  Q
    |||||||||| || |||||| || ||||||||||||| ||||||| ||||||||||  | |||||||| ||||||||    
T  43924528 catgggaaagctaattttga-ccgttagattaaatagagaacatatttttatcataaacactcaacaccaaattttt 43924603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 485 - 561
Target Start/End: Complemental strand, 43925028 - 43924953
Alignment:
Q  485 catgggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaattttt 561  Q
    |||| |||||||| |||||| || ||||||||||||| ||||||| ||||||||||| | |||||||| | ||||||    
T  43925028 catgagaaagttaattttga-ccgttagattaaatagagaacatatttttatcatagacactcaacaccagattttt 43924953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 486 - 561
Target Start/End: Complemental strand, 43972095 - 43972021
Alignment:
Q  486 atgggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaattttt 561  Q
    |||||||||||| |||| ||||||||||| |||||| ||||||| ||||| ||||| | |||||||| | ||||||    
T  43972095 atgggaaagttaatttt-aaccattagataaaatagagaacatacttttaccatagacactcaacaccagattttt 43972021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 5e-33; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 485 - 605
Target Start/End: Original strand, 53289511 - 53289631
Alignment:
Q  485 catgggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaatttttgtcacatcatcttccaccaccac 584  Q
    ||||||||||||| |||| || ||||||||||||||||| ||| ||||||||||| |||||| ||||  ||||||||  |||||||||||||||||||||    
T  53289511 catgggaaagttaatttttaatcattagattaaatagggtacacaattttatcatggtctctgaacatcaaatttttcccacatcatcttccaccaccac 53289610  T
Q  585 ccttctcccctacctttgtgt 605  Q
    |||||| ||||||||||||||    
T  53289611 ccttcttccctacctttgtgt 53289631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 489 - 604
Target Start/End: Complemental strand, 39413628 - 39413513
Alignment:
Q  489 ggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaatttttgtcacatcatcttccaccaccaccctt 588  Q
    |||||||||||||| ||||||| |||||| ||| ||||||||||||||||| ||||||| |||||||||||||  |||||||||||||| ||||| ||||    
T  39413628 ggaaagttagtttttaaccattggattaagtagagaacataattttatcatggtctctcgacactaaattttttccacatcatcttccatcaccaacctt 39413529  T
Q  589 ctcccctacctttgtg 604  Q
    ||||||| ||||||||    
T  39413528 ctccccttcctttgtg 39413513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 485 - 614
Target Start/End: Original strand, 11680314 - 11680444
Alignment:
Q  485 catgggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaatttttgtcacatcatcttccaccaccac 584  Q
    ||||||||||||||||||  ||||||||||||||||||||||| ||| |||| || |||||||| ||||| || |||  |||||||||||||||||||||    
T  11680314 catgggaaagttagtttttgaccattagattaaatagggaacacaatgttattatggtctctcagcactagatctttcccacatcatcttccaccaccac 11680413  T
Q  585 ccttct-cccctacctttgtgtgtttccctc 614  Q
    | |||| ||||||||||||||| ||| ||||    
T  11680414 ctttctccccctacctttgtgtcttttcctc 11680444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 485 - 614
Target Start/End: Original strand, 11688593 - 11688723
Alignment:
Q  485 catgggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaatttttgtcacatcatcttccaccaccac 584  Q
    ||||||||||||||||||  ||||||||||||||||||||||| ||| |||| || |||||||| ||||| || |||  |||||||||||||||||||||    
T  11688593 catgggaaagttagtttttgaccattagattaaatagggaacacaatgttattatggtctctcagcactagatctttcccacatcatcttccaccaccac 11688692  T
Q  585 ccttct-cccctacctttgtgtgtttccctc 614  Q
    | |||| ||||||||||||||| ||| ||||    
T  11688693 ctttctccccctacctttgtgtcttttcctc 11688723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 485 - 614
Target Start/End: Complemental strand, 12590213 - 12590083
Alignment:
Q  485 catgggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaatttttgtcacatcatcttccaccaccac 584  Q
    ||||||||||||||||||  ||||||||||||||||||||||| ||| |||| || |||||||| ||||| || |||  |||||||||||||||||||||    
T  12590213 catgggaaagttagtttttgaccattagattaaatagggaacacaatgttattatggtctctcagcactagatctttcccacatcatcttccaccaccac 12590114  T
Q  585 ccttct-cccctacctttgtgtgtttccctc 614  Q
    | |||| ||||||||||||||| ||| ||||    
T  12590113 ctttctccccctacctttgtgtcttttcctc 12590083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 485 - 614
Target Start/End: Complemental strand, 25655649 - 25655519
Alignment:
Q  485 catgggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaatttttgtcacatcatcttccaccaccac 584  Q
    ||||||||||||||||||  |||||||||||||||||| |||| ||| |||| || |||||||| ||||| || |||  |||||||||||||||||||||    
T  25655649 catgggaaagttagtttttgaccattagattaaataggaaacacaatgttattatggtctctcagcactagatctttcccacatcatcttccaccaccac 25655550  T
Q  585 ccttct-cccctacctttgtgtgtttccctc 614  Q
    |||||| ||||||||||||||| ||| ||||    
T  25655549 ccttctccccctacctttgtgtcttttcctc 25655519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 482 - 602
Target Start/End: Complemental strand, 52758723 - 52758603
Alignment:
Q  482 catcatgggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaatttttgtcacatcatcttccaccac 581  Q
    |||||||||||||||||||||   |||||||||||||||||||||| ||||||| ||||||||||||||| ||||| |||  |||  |||||||||||||    
T  52758723 catcatgggaaagttagtttttggccattagattaaatagggaacacaattttaccatagtctctcaacattaaatattttccaccacatcttccaccac 52758624  T
Q  582 cacccttctcccctacctttg 602  Q
    ||| ||||| ||| |||||||    
T  52758623 cactcttctgccccacctttg 52758603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 485 - 614
Target Start/End: Original strand, 46764290 - 46764420
Alignment:
Q  485 catgggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaatttttgtcacatcatcttccaccaccac 584  Q
    ||||||||||||||||||  ||||||| |||||||||| |||| ||| |||| || |||||||| ||||| || |||  |||||||||||||||||||||    
T  46764290 catgggaaagttagtttttgaccattaaattaaataggaaacacaatgttattatggtctctcagcactagatctttcccacatcatcttccaccaccac 46764389  T
Q  585 ccttctcccc-tacctttgtgtgtttccctc 614  Q
    |||||||||| ||||||||||| ||| ||||    
T  46764390 ccttctccccatacctttgtgtcttttcctc 46764420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 491 - 599
Target Start/End: Original strand, 3619042 - 3619150
Alignment:
Q  491 aaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaatttttgtcacatcatcttccaccaccacccttct 590  Q
    |||||||  ||| ||| |||||||||||||||  ||| |||||||||||  |||||||||| |||||||||  |||||||||||||||||||||||||||    
T  3619042 aaagttaagttttaactattagattaaataggatacacaattttatcatgatctctcaacattaaatttttcccacatcatcttccaccaccacccttct 3619141  T
Q  591 cccctacct 599  Q
    |||||||||    
T  3619142 cccctacct 3619150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 489 - 583
Target Start/End: Complemental strand, 49399568 - 49399474
Alignment:
Q  489 ggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaatttttgtcacatcatcttccaccacca 583  Q
    |||||||||||||| |||||||||||||||||||| | | ||||||||||| |||||||||||  ||||||||  ||||||||||||||||||||    
T  49399568 ggaaagttagtttttaaccattagattaaatagggtatacaattttatcatggtctctcaacatcaaatttttcccacatcatcttccaccacca 49399474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 485 - 589
Target Start/End: Original strand, 31634141 - 31634246
Alignment:
Q  485 catgggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaatttttgtc-acatcatcttccaccacca 583  Q
    |||||||||||||||||| ||||||| |||||||||||||||| ||||||||||| |||| |||||||   |||||| ||  ||||||||||||||||||    
T  31634141 catgggaaagttagtttttaaccatttgattaaatagggaacacaattttatcatggtctttcaacacgctatttttttcttcatcatcttccaccacca 31634240  T
Q  584 cccttc 589  Q
     |||||    
T  31634241 tccttc 31634246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 499 - 583
Target Start/End: Complemental strand, 7988280 - 7988200
Alignment:
Q  499 ttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaatttttgtcacatcatcttccaccacca 583  Q
    ||||| ||||||||||||| || |||||||||| |||||||||||||||||||||| |||||    ||| |||||||||||||||    
T  7988280 ttttggaccattagattaagtaaggaacataatattatcatagtctctcaacactatatttt----acaacatcttccaccacca 7988200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 484 - 552
Target Start/End: Original strand, 15481072 - 15481139
Alignment:
Q  484 tcatgggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacac 552  Q
    ||||||||||| || |||||| || ||||||||||||| ||||||| ||||||||||| ||||||||||    
T  15481072 tcatgggaaagctaattttga-ccgttagattaaatagagaacatatttttatcatagactctcaacac 15481139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 505 - 561
Target Start/End: Original strand, 47523276 - 47523332
Alignment:
Q  505 accattagattaaatagggaacataattttatcatagtctctcaacactaaattttt 561  Q
    |||||||||||||||| |||||| |||||||||||||||||| | ||||| ||||||    
T  47523276 accattagattaaataaggaacacaattttatcatagtctcttatcactagattttt 47523332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 504 - 560
Target Start/End: Original strand, 54007629 - 54007685
Alignment:
Q  504 aaccattagattaaatagggaacataattttatcatagtctctcaacactaaatttt 560  Q
    ||||||||||||||||| |||||| |||||||||||||||| ||| ||||| |||||    
T  54007629 aaccattagattaaataaggaacacaattttatcatagtctttcatcactagatttt 54007685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 485 - 561
Target Start/End: Complemental strand, 10421591 - 10421516
Alignment:
Q  485 catgggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaattttt 561  Q
    |||||||||| || |||||| || ||||||||||||| ||||||| ||||||||||| | |||||||| | ||||||    
T  10421591 catgggaaagctaattttga-ccgttagattaaatagagaacatatttttatcatagacactcaacaccagattttt 10421516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 504 - 560
Target Start/End: Complemental strand, 54007593 - 54007537
Alignment:
Q  504 aaccattagattaaatagggaacataattttatcatagtctctcaacactaaatttt 560  Q
    |||||||| |||||||| |||||| |||||||||||||||| ||| ||||| |||||    
T  54007593 aaccattatattaaataaggaacacaattttatcatagtctttcatcactagatttt 54007537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 561
Target Start/End: Complemental strand, 6680333 - 6680277
Alignment:
Q  505 accattagattaaatagggaacataattttatcatagtctctcaacactaaattttt 561  Q
    ||||||||||||| ||  ||||||| |||||||||||  ||||||||||| ||||||    
T  6680333 accattagattaagtaaagaacatagttttatcatagattctcaacactagattttt 6680277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 1e-30; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 485 - 604
Target Start/End: Complemental strand, 41224853 - 41224733
Alignment:
Q  485 catgggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaatttttgtc-acatcatcttccaccacca 583  Q
    |||||||||||||||||| ||||||| |||||||||||||||| ||||||||||| |||| |||||||   |||||| ||  ||||||||||||||||||    
T  41224853 catgggaaagttagtttttaaccatttgattaaatagggaacacaattttatcatggtctttcaacacactatttttttcttcatcatcttccaccacca 41224754  T
Q  584 cccttctcccctacctttgtg 604  Q
     ||||||||||||||||||||    
T  41224753 tccttctcccctacctttgtg 41224733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 485 - 583
Target Start/End: Original strand, 44896084 - 44896182
Alignment:
Q  485 catgggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaatttttgtcacatcatcttccaccacca 583  Q
    |||||||||||||||||| |||||||||||||||||||| ||| ||||||||||| |||||||||||  ||||||||  ||||||||||||||||||||    
T  44896084 catgggaaagttagtttttaaccattagattaaatagggtacacaattttatcatggtctctcaacatcaaatttttcccacatcatcttccaccacca 44896182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 485 - 604
Target Start/End: Original strand, 29314619 - 29314739
Alignment:
Q  485 catgggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaatttttgtc-acatcatcttccaccacca 583  Q
    |||||||||||||||||| ||||||| |||||||||||||||| ||||||||||| |||| |||||||   |||||| ||  ||||||||||||||||||    
T  29314619 catgggaaagttagtttttaaccatttgattaaatagggaacacaattttatcatggtctttcaacacactatttttttcttcatcatcttccaccacca 29314718  T
Q  584 cccttctcccctacctttgtg 604  Q
     ||||||||||||| ||||||    
T  29314719 tccttctcccctacttttgtg 29314739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 485 - 602
Target Start/End: Complemental strand, 33687760 - 33687643
Alignment:
Q  485 catgggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaatttttgtcacatcatcttccaccaccac 584  Q
    |||| ||||||||||||| |||||||  ||||| ||||||||||||| ||||||| ||||||||||||||||  |||  |||||||||||||| |||||     
T  33687760 catgagaaagttagtttttaaccattgaattaagtagggaacataatgttatcatggtctctcaacactaaaaattttccacatcatcttccatcaccaa 33687661  T
Q  585 ccttctcccctacctttg 602  Q
    ||||||||||| ||||||    
T  33687660 ccttctccccttcctttg 33687643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 485 - 561
Target Start/End: Complemental strand, 29007209 - 29007133
Alignment:
Q  485 catgggaaagttagttttgaaccattagattaaatagg-gaacataattttatcatagtctctcaacactaaattttt 561  Q
    |||||||||||||||||| ||||||||||||||| ||| | || |||||||||||| |||| || |||||| ||||||    
T  29007209 catgggaaagttagtttttaaccattagattaaagaggagtac-taattttatcatggtctatccacactatattttt 29007133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 505 - 577
Target Start/End: Complemental strand, 36845193 - 36845121
Alignment:
Q  505 accattagattaaatagggaacataattttatcatagtctctcaacactaaatttttgtcacatcatcttcca 577  Q
    ||||||||||||  || |||||||||| ||||||||||| |||||||||| ||| || | |||| ||||||||    
T  36845193 accattagattatgtaaggaacataatattatcatagtccctcaacactagattatttttacattatcttcca 36845121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 524 - 583
Target Start/End: Original strand, 32870341 - 32870396
Alignment:
Q  524 aacataattttatcatagtctctcaacactaaatttttgtcacatcatcttccaccacca 583  Q
    |||||||| |||||||||||||||||||||| |||||    ||| |||||||||||||||    
T  32870341 aacataatattatcatagtctctcaacactatatttt----acaacatcttccaccacca 32870396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 485 - 518
Target Start/End: Original strand, 29006385 - 29006418
Alignment:
Q  485 catgggaaagttagttttgaaccattagattaaa 518  Q
    |||||||||||||||||| |||||||||||||||    
T  29006385 catgggaaagttagtttttaaccattagattaaa 29006418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 561
Target Start/End: Original strand, 46757481 - 46757537
Alignment:
Q  505 accattagattaaatagggaacataattttatcatagtctctcaacactaaattttt 561  Q
    |||||||||| || ||| ||||||||||||||||||| | |||||||| || |||||    
T  46757481 accattagataaagtagagaacataattttatcatagacactcaacaccaatttttt 46757537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 2e-29; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 485 - 609
Target Start/End: Original strand, 42654873 - 42654996
Alignment:
Q  485 catgggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacac-taaatttttgtcacatcatcttccaccacca 583  Q
    |||||||||||||||||| ||||||| |||||| ||||||||| ||||||| ||| |||||||||||| ||  ||||| |||||| ||||||||||||||    
T  42654873 catgggaaagttagtttttaaccattggattaagtagggaacaaaattttaccatggtctctcaacacttatttttttttcacattatcttccaccacca 42654972  T
Q  584 cccttctcccctacctttgtgtgttt 609  Q
    ||||  ||||||||||||||||||||    
T  42654973 ccct--tcccctacctttgtgtgttt 42654996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 506 - 550
Target Start/End: Complemental strand, 8040434 - 8040390
Alignment:
Q  506 ccattagattaaatagggaacataattttatcatagtctctcaac 550  Q
    |||||||||||||||||||||||| || ||||||| |||||||||    
T  8040434 ccattagattaaatagggaacatatttctatcatactctctcaac 8040390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 485 - 518
Target Start/End: Original strand, 8320912 - 8320945
Alignment:
Q  485 catgggaaagttagttttgaaccattagattaaa 518  Q
    |||||||||||||||||| |||||||||||||||    
T  8320912 catgggaaagttagtttttaaccattagattaaa 8320945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 481 - 514
Target Start/End: Complemental strand, 24027701 - 24027668
Alignment:
Q  481 ccatcatgggaaagttagttttgaaccattagat 514  Q
    |||||||||||||||||||||| |||||||||||    
T  24027701 ccatcatgggaaagttagtttttaaccattagat 24027668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 7e-23; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 490 - 585
Target Start/End: Complemental strand, 29921541 - 29921446
Alignment:
Q  490 gaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaatttttgtcacatcatcttccaccaccacc 585  Q
    ||||||||||||| |||||||| ||||||||||| ||| |||||||| || ||||||||||| |||||||||   |||||||||||||||||||||    
T  29921541 gaaagttagtttttaaccattaaattaaatagggtacacaattttataatggtctctcaacattaaatttttccgacatcatcttccaccaccacc 29921446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 485 - 589
Target Start/End: Complemental strand, 5006318 - 5006214
Alignment:
Q  485 catgggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaatttttgtcacatcatcttccaccaccac 584  Q
    |||| |||||||| |||| || ||||  ||||| ||||||||| ||||||| ||| ||||||||||||| |||||||  |||||||||||||||||||||    
T  5006318 catgagaaagttactttttaatcattgaattaagtagggaacaaaattttaccattgtctctcaacacttaattttttccacatcatcttccaccaccac 5006219  T
Q  585 ccttc 589  Q
    |||||    
T  5006218 ccttc 5006214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 485 - 589
Target Start/End: Original strand, 40992260 - 40992365
Alignment:
Q  485 catgggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaatttttgtc-acatcatcttccaccacca 583  Q
    |||||||||||||||||| ||||||| |||||||||||||||| ||||||||||| |||| | |||||   |||||| ||  ||||||||||||||||||    
T  40992260 catgggaaagttagtttttaaccatttgattaaatagggaacacaattttatcatggtcttttaacacactatttttttcttcatcatcttccaccacca 40992359  T
Q  584 cccttc 589  Q
     |||||    
T  40992360 tccttc 40992365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 481 - 554
Target Start/End: Original strand, 14487964 - 14488037
Alignment:
Q  481 ccatcatgggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacacta 554  Q
    |||| |||||||||||| |||| |||||||||||| | || |||||| | ||||||||||||||||| ||||||    
T  14487964 ccattatgggaaagttactttttaaccattagattgattatggaacacacttttatcatagtctctctacacta 14488037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 485 - 589
Target Start/End: Original strand, 16426591 - 16426696
Alignment:
Q  485 catgggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaatttttgtc-acatcatcttccaccacca 583  Q
    ||||| ||||||| |||| ||||||| |||||| ||||||| | ||||||||||| |||| |||||||   |||||| ||  ||||||||||||||||||    
T  16426591 catggaaaagttaatttttaaccatttgattaagtagggaatacaattttatcatggtctttcaacacactatttttttcttcatcatcttccaccacca 16426690  T
Q  584 cccttc 589  Q
     |||||    
T  16426691 tccttc 16426696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 505 - 561
Target Start/End: Complemental strand, 36476737 - 36476681
Alignment:
Q  505 accattagattaaatagggaacataattttatcatagtctctcaacactaaattttt 561  Q
    |||||||||||||||| |||||| |||||||||||||||||| | ||||| ||||||    
T  36476737 accattagattaaataaggaacacaattttatcatagtctcttatcactagattttt 36476681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 486 - 561
Target Start/End: Complemental strand, 4976514 - 4976440
Alignment:
Q  486 atgggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaattttt 561  Q
    |||||||||||| |||| ||||||||||| |||||| ||||||| ||||| ||||| | |||||||| ||||||||    
T  4976514 atgggaaagttaatttt-aaccattagataaaatagagaacatacttttaccatagacactcaacaccaaattttt 4976440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 486 - 561
Target Start/End: Complemental strand, 4994421 - 4994347
Alignment:
Q  486 atgggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaattttt 561  Q
    |||||||||||| |||| ||||||||||| |||||| ||||||| ||||| ||||| | |||||||| ||||||||    
T  4994421 atgggaaagttaatttt-aaccattagataaaatagagaacatacttttaccatagacactcaacaccaaattttt 4994347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 482 - 577
Target Start/End: Original strand, 23875275 - 23875369
Alignment:
Q  482 catcatgggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaatttttgtcacatcatcttcca 577  Q
    |||||||||||||||  || ||| ||||||||| |  || |||||||||| |||||||||||| ||||||||| ||| || | |||| ||||||||    
T  23875275 catcatgggaaagttttttatga-ccattagatcatgtaaggaacataatattatcatagtctttcaacactagattatttttacattatcttcca 23875369  T

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Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 481 - 519
Target Start/End: Complemental strand, 37996598 - 37996560
Alignment:
Q  481 ccatcatgggaaagttagttttgaaccattagattaaat 519  Q
    |||||||||||||||||||||| ||||||||||| ||||    
T  37996598 ccatcatgggaaagttagtttttaaccattagatcaaat 37996560  T

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Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 485 - 518
Target Start/End: Complemental strand, 6610054 - 6610021
Alignment:
Q  485 catgggaaagttagttttgaaccattagattaaa 518  Q
    |||||||||||||||||| |||||||||||||||    
T  6610054 catgggaaagttagtttttaaccattagattaaa 6610021  T

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Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 481 - 514
Target Start/End: Original strand, 7994088 - 7994121
Alignment:
Q  481 ccatcatgggaaagttagttttgaaccattagat 514  Q
    |||||||||||||||||||||| |||||||||||    
T  7994088 ccatcatgggaaagttagtttttaaccattagat 7994121  T

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Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 485 - 518
Target Start/End: Complemental strand, 15562051 - 15562018
Alignment:
Q  485 catgggaaagttagttttgaaccattagattaaa 518  Q
    |||||||||||||||||| |||||||||||||||    
T  15562051 catgggaaagttagtttttaaccattagattaaa 15562018  T

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Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 506 - 558
Target Start/End: Complemental strand, 4479692 - 4479640
Alignment:
Q  506 ccattagattaaatagggaacataattttatcatagtctctcaacactaaatt 558  Q
    ||||||||||||||  |||||||| | |||||||| |||||| ||||||||||    
T  4479692 ccattagattaaatgaggaacatattcttatcatactctctccacactaaatt 4479640  T

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Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 506 - 554
Target Start/End: Original strand, 14573319 - 14573367
Alignment:
Q  506 ccattagattaaatagggaacataattttatcatagtctctcaacacta 554  Q
    ||||||||||||||  |||| ||| |||||||||| |||||||||||||    
T  14573319 ccattagattaaatgaggaatatatttttatcatactctctcaacacta 14573367  T

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Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 506 - 550
Target Start/End: Original strand, 38834445 - 38834489
Alignment:
Q  506 ccattagattaaatagggaacataattttatcatagtctctcaac 550  Q
    ||||||||||||||  |||||||| |||||||||| |||||||||    
T  38834445 ccattagattaaatgaggaacatatttttatcatactctctcaac 38834489  T

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Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 506 - 558
Target Start/End: Original strand, 42369701 - 42369753
Alignment:
Q  506 ccattagattaaatagggaacataattttatcatagtctctcaacactaaatt 558  Q
    ||||||||| || ||| ||||||||||||||||||| | |||||||| |||||    
T  42369701 ccattagataaagtagagaacataattttatcatagacactcaacaccaaatt 42369753  T

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Target: scaffold0155 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 485 - 589
Target Start/End: Original strand, 17377 - 17482
Alignment:
Q  485 catgggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaatttttgtc-acatcatcttccaccacca 583  Q
    |||||||||||||||||| ||||||| ||| |||||||||||| ||||||||||| |||| |||||||   |||||| ||  ||||||||||||||||||    
T  17377 catgggaaagttagtttttaaccatttgatcaaatagggaacacaattttatcatggtctttcaacacactatttttttcttcatcatcttccaccacca 17476  T
Q  584 cccttc 589  Q
     |||||    
T  17477 tccttc 17482  T

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Target: scaffold0069 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 495 - 589
Target Start/End: Complemental strand, 1938 - 1844
Alignment:
Q  495 ttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacactaaatttttgtcacatcatcttccaccaccacccttc 589  Q
    ||||||||  || |||| ||||||||| |||||  || |||| |||||||||||||||||||| |||  ||||||||||||||||||||||||||    
T  1938 ttagtttttgactattaaattaaatagagaacacgatgttattatagtctctcaacactaaatatttcccacatcatcttccaccaccacccttc 1844  T

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Target: scaffold0071 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 485 - 549
Target Start/End: Complemental strand, 11928 - 11865
Alignment:
Q  485 catgggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaa 549  Q
    ||||||||||||| | |||| |||||||||||| ||| ||||||| |||||||||||||| ||||    
T  11928 catgggaaagttaatcttga-ccattagattaagtagagaacatatttttatcatagtctttcaa 11865  T

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Target: scaffold0189 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 485 - 552
Target Start/End: Complemental strand, 12869 - 12803
Alignment:
Q  485 catgggaaagttagttttgaaccattagattaaatagggaacataattttatcatagtctctcaacac 552  Q
    ||||||||||||| |||||| ||||||||| || ||| ||||||| ||||||||||| | ||||||||    
T  12869 catgggaaagttaattttga-ccattagataaactagagaacatacttttatcatagacactcaacac 12803  T

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Target: scaffold0129 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 485 - 544
Target Start/End: Original strand, 42524 - 42583
Alignment:
Q  485 catgggaaagttagttttgaaccattagattaaatagggaaca-taattttatcatagtct 544  Q
    |||||||||||| | ||| ||||||||||||||||| ||||||  ||||||||||||||||    
T  42524 catgggaaagttgggtttaaaccattagattaaata-ggaacaccaattttatcatagtct 42583  T

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Target: scaffold0041 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 506 - 558
Target Start/End: Original strand, 27279 - 27331
Alignment:
Q  506 ccattagattaaatagggaacataattttatcatagtctctcaacactaaatt 558  Q
    ||||||||||||||  |||||| | | |||||||| |||||||||||||||||    
T  27279 ccattagattaaatgaggaacacattcttatcatactctctcaacactaaatt 27331  T

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