View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16535_low_13 (Length: 444)

Name: NF16535_low_13
Description: NF16535
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16535_low_13
NF16535_low_13
[»] chr6 (30 HSPs)
chr6 (20-432)||(15045804-15046216)
chr6 (65-125)||(181543-181604)
chr6 (65-123)||(11656012-11656071)
chr6 (65-126)||(15058103-15058165)
chr6 (65-125)||(24983515-24983576)
chr6 (65-125)||(31894276-31894337)
chr6 (65-125)||(34657628-34657689)
chr6 (65-119)||(6801924-6801979)
chr6 (65-123)||(29363295-29363354)
chr6 (65-121)||(3291834-3291891)
chr6 (65-125)||(3720307-3720368)
chr6 (65-119)||(5302344-5302399)
chr6 (65-119)||(11143653-11143708)
chr6 (65-123)||(13909413-13909472)
chr6 (65-119)||(30716893-30716948)
chr6 (65-125)||(7920226-7920287)
chr6 (67-122)||(1063671-1063727)
chr6 (65-125)||(1781791-1781850)
chr6 (76-123)||(21010162-21010210)
chr6 (65-123)||(4367319-4367378)
chr6 (65-123)||(13087519-13087578)
chr6 (65-123)||(33510129-33510188)
chr6 (77-122)||(21425635-21425681)
chr6 (65-113)||(22398412-22398461)
chr6 (90-123)||(31283493-31283526)
chr6 (65-125)||(34299982-34300043)
chr6 (65-120)||(13206898-13206954)
chr6 (65-120)||(17828932-17828988)
chr6 (97-125)||(27367524-27367552)
chr6 (97-125)||(27457871-27457899)
[»] chr7 (47 HSPs)
chr7 (65-125)||(21350699-21350760)
chr7 (65-125)||(2459465-2459526)
chr7 (65-125)||(11373502-11373563)
chr7 (65-120)||(3178278-3178334)
chr7 (65-123)||(759165-759224)
chr7 (65-123)||(34947496-34947555)
chr7 (65-123)||(41506139-41506198)
chr7 (65-123)||(6495008-6495067)
chr7 (65-123)||(9785984-9786043)
chr7 (65-123)||(19271807-19271866)
chr7 (69-123)||(21390291-21390346)
chr7 (65-123)||(25571415-25571474)
chr7 (65-123)||(28202383-28202442)
chr7 (65-123)||(36790736-36790795)
chr7 (65-113)||(7463219-7463268)
chr7 (65-113)||(24516363-24516412)
chr7 (65-125)||(28103727-28103788)
chr7 (65-125)||(34100621-34100682)
chr7 (65-125)||(37245684-37245745)
chr7 (65-125)||(46478367-46478428)
chr7 (65-123)||(32346126-32346185)
chr7 (65-123)||(49101659-49101718)
chr7 (65-126)||(8592514-8592576)
chr7 (67-123)||(21760060-21760117)
chr7 (65-125)||(22738695-22738756)
chr7 (65-124)||(23670481-23670541)
chr7 (65-125)||(29835488-29835548)
chr7 (65-120)||(30546429-30546485)
chr7 (66-125)||(47045546-47045606)
chr7 (65-119)||(83385-83440)
chr7 (65-119)||(44424144-44424199)
chr7 (65-123)||(48608862-48608921)
chr7 (66-123)||(38391744-38391802)
chr7 (65-113)||(13961965-13962014)
chr7 (65-125)||(16904373-16904434)
chr7 (65-125)||(26974020-26974081)
chr7 (65-125)||(32018990-32019051)
chr7 (65-125)||(33819208-33819269)
chr7 (65-115)||(42796009-42796063)
chr7 (63-125)||(4958672-4958735)
chr7 (65-123)||(30865963-30866022)
chr7 (65-111)||(35333051-35333098)
chr7 (65-114)||(31930571-31930623)
chr7 (65-113)||(43873929-43873978)
chr7 (75-119)||(14063303-14063347)
chr7 (75-119)||(14373331-14373375)
chr7 (68-123)||(17828428-17828483)
[»] chr4 (56 HSPs)
chr4 (65-125)||(17237369-17237430)
chr4 (65-123)||(33790804-33790863)
chr4 (65-125)||(47464438-47464499)
chr4 (65-123)||(21240777-21240836)
chr4 (65-123)||(49428415-49428474)
chr4 (65-123)||(5841500-5841560)
chr4 (65-125)||(6643733-6643794)
chr4 (65-125)||(32884788-32884849)
chr4 (65-125)||(34360642-34360703)
chr4 (65-125)||(49176007-49176068)
chr4 (65-125)||(51624773-51624834)
chr4 (65-123)||(22130032-22130091)
chr4 (65-123)||(35311296-35311355)
chr4 (65-123)||(35380406-35380465)
chr4 (65-123)||(38405175-38405234)
chr4 (65-119)||(47773092-47773147)
chr4 (65-123)||(49746950-49747009)
chr4 (65-125)||(7061737-7061798)
chr4 (65-125)||(16821404-16821465)
chr4 (65-125)||(18741547-18741608)
chr4 (65-125)||(43237230-43237291)
chr4 (65-122)||(36985776-36985834)
chr4 (65-122)||(52247501-52247559)
chr4 (65-126)||(53346745-53346807)
chr4 (65-125)||(44536269-44536329)
chr4 (65-123)||(26147688-26147748)
chr4 (64-123)||(31370372-31370432)
chr4 (65-123)||(2066778-2066837)
chr4 (65-123)||(6609750-6609809)
chr4 (65-123)||(19265797-19265856)
chr4 (65-123)||(42616976-42617035)
chr4 (65-123)||(50264153-50264212)
chr4 (65-113)||(11288702-11288751)
chr4 (65-113)||(11907672-11907721)
chr4 (73-125)||(43902238-43902291)
chr4 (65-117)||(47359022-47359075)
chr4 (65-125)||(53412095-53412156)
chr4 (65-108)||(52859872-52859916)
chr4 (68-123)||(54506777-54506833)
chr4 (65-123)||(461947-462006)
chr4 (65-123)||(2653409-2653468)
chr4 (65-119)||(17114433-17114488)
chr4 (65-122)||(10754363-10754421)
chr4 (65-122)||(10968132-10968190)
chr4 (69-118)||(40122931-40122981)
chr4 (65-125)||(2942717-2942778)
chr4 (65-114)||(23915503-23915552)
chr4 (69-121)||(25142456-25142509)
chr4 (65-113)||(25233180-25233229)
chr4 (90-123)||(28500982-28501015)
chr4 (65-125)||(35998799-35998859)
chr4 (65-125)||(38663520-38663581)
chr4 (65-113)||(44526378-44526427)
chr4 (90-122)||(10672643-10672675)
chr4 (90-122)||(10886283-10886315)
chr4 (76-123)||(35251888-35251936)
[»] chr1 (52 HSPs)
chr1 (65-125)||(39864098-39864159)
chr1 (65-125)||(6785243-6785304)
chr1 (65-125)||(35367789-35367850)
chr1 (66-125)||(9307614-9307674)
chr1 (65-125)||(24991723-24991784)
chr1 (65-120)||(25089156-25089212)
chr1 (65-123)||(7759204-7759263)
chr1 (65-123)||(13579691-13579750)
chr1 (65-119)||(15699115-15699170)
chr1 (65-119)||(20209910-20209965)
chr1 (63-125)||(22856305-22856368)
chr1 (65-123)||(37276450-37276509)
chr1 (65-119)||(37506117-37506172)
chr1 (65-123)||(38787330-38787389)
chr1 (65-119)||(49224056-49224111)
chr1 (65-123)||(52429333-52429392)
chr1 (65-122)||(8896402-8896460)
chr1 (65-125)||(12039069-12039130)
chr1 (65-125)||(14757664-14757725)
chr1 (65-125)||(44707830-44707891)
chr1 (66-125)||(37539114-37539174)
chr1 (65-119)||(40144917-40144972)
chr1 (66-123)||(16395117-16395175)
chr1 (80-125)||(35682879-35682925)
chr1 (65-113)||(2572468-2572517)
chr1 (65-125)||(6023719-6023780)
chr1 (65-113)||(10495838-10495887)
chr1 (65-123)||(24880862-24880924)
chr1 (65-125)||(27896942-27897003)
chr1 (65-128)||(44761601-44761665)
chr1 (65-123)||(26093383-26093442)
chr1 (65-123)||(33733332-33733391)
chr1 (65-123)||(36701910-36701969)
chr1 (65-123)||(36718014-36718073)
chr1 (65-126)||(3260577-3260639)
chr1 (73-125)||(4659763-4659816)
chr1 (65-123)||(917013-917072)
chr1 (65-123)||(6160529-6160588)
chr1 (65-123)||(30755011-30755070)
chr1 (65-123)||(31978722-31978781)
chr1 (65-123)||(34031597-34031656)
chr1 (65-123)||(52837269-52837328)
chr1 (66-123)||(4441674-4441732)
chr1 (65-121)||(5179469-5179526)
chr1 (65-113)||(9412873-9412922)
chr1 (65-125)||(27721519-27721580)
chr1 (65-125)||(28748978-28749039)
chr1 (21-73)||(6160431-6160483)
chr1 (65-123)||(9379220-9379280)
chr1 (66-125)||(26256159-26256219)
chr1 (65-119)||(32826061-32826119)
chr1 (65-125)||(41080587-41080646)
[»] chr2 (37 HSPs)
chr2 (21-123)||(5272160-5272263)
chr2 (65-123)||(8947117-8947176)
chr2 (65-123)||(36354508-36354567)
chr2 (65-123)||(37322417-37322476)
chr2 (65-125)||(17695317-17695378)
chr2 (65-125)||(35313874-35313935)
chr2 (65-123)||(9458331-9458390)
chr2 (65-119)||(15359152-15359207)
chr2 (65-125)||(3323337-3323398)
chr2 (65-125)||(5789713-5789774)
chr2 (71-123)||(7494909-7494962)
chr2 (65-125)||(35242362-35242423)
chr2 (65-123)||(14523437-14523496)
chr2 (65-123)||(19937374-19937433)
chr2 (65-123)||(34120502-34120561)
chr2 (65-119)||(36794277-36794332)
chr2 (65-123)||(39691479-39691538)
chr2 (65-119)||(39785578-39785633)
chr2 (65-125)||(7438917-7438978)
chr2 (65-125)||(16377721-16377786)
chr2 (65-113)||(17346427-17346476)
chr2 (65-125)||(26863423-26863484)
chr2 (65-119)||(11742593-11742648)
chr2 (65-123)||(25637470-25637529)
chr2 (65-123)||(34225579-34225638)
chr2 (65-123)||(43410415-43410474)
chr2 (67-118)||(31448760-31448812)
chr2 (65-120)||(32831240-32831296)
chr2 (65-123)||(16463678-16463737)
chr2 (65-123)||(17122973-17123032)
chr2 (69-123)||(43115871-43115926)
chr2 (76-125)||(43699672-43699722)
chr2 (65-113)||(39329729-39329777)
chr2 (65-116)||(16805877-16805929)
chr2 (65-116)||(16845158-16845210)
chr2 (66-113)||(18202104-18202152)
chr2 (65-120)||(45235573-45235629)
[»] chr8 (38 HSPs)
chr8 (65-125)||(44761562-44761623)
chr8 (65-125)||(45425734-45425795)
chr8 (65-123)||(22771903-22771962)
chr8 (65-123)||(29226596-29226655)
chr8 (65-115)||(34948755-34948806)
chr8 (65-125)||(7172901-7172962)
chr8 (65-125)||(9300181-9300242)
chr8 (65-124)||(11977004-11977064)
chr8 (65-120)||(31271013-31271069)
chr8 (65-123)||(10180015-10180074)
chr8 (65-123)||(17719326-17719385)
chr8 (65-126)||(21216169-21216229)
chr8 (65-123)||(26626180-26626239)
chr8 (65-123)||(31082608-31082667)
chr8 (65-119)||(31231723-31231778)
chr8 (65-123)||(32678392-32678451)
chr8 (65-122)||(42886990-42887048)
chr8 (65-113)||(10098059-10098108)
chr8 (65-125)||(14855002-14855063)
chr8 (65-125)||(17823908-17823969)
chr8 (65-121)||(32476278-32476335)
chr8 (65-123)||(5053221-5053280)
chr8 (65-123)||(13335205-13335264)
chr8 (65-123)||(39301024-39301083)
chr8 (65-123)||(39482604-39482663)
chr8 (65-125)||(4428419-4428480)
chr8 (65-113)||(27294127-27294176)
chr8 (65-125)||(36006955-36007016)
chr8 (65-125)||(39405749-39405810)
chr8 (65-125)||(43719304-43719365)
chr8 (65-116)||(40996433-40996485)
chr8 (65-123)||(396679-396738)
chr8 (65-123)||(6796397-6796460)
chr8 (65-123)||(35732110-35732169)
chr8 (65-121)||(1739534-1739591)
chr8 (65-125)||(4924135-4924196)
chr8 (75-123)||(10953813-10953862)
chr8 (75-123)||(10961818-10961867)
[»] chr5 (36 HSPs)
chr5 (65-125)||(8698296-8698357)
chr5 (65-125)||(22848449-22848510)
chr5 (65-120)||(6754021-6754077)
chr5 (65-123)||(6315842-6315901)
chr5 (65-123)||(6753723-6753782)
chr5 (65-123)||(40899907-40899966)
chr5 (65-126)||(4441007-4441069)
chr5 (65-125)||(31655040-31655101)
chr5 (65-125)||(40530289-40530350)
chr5 (76-126)||(2232145-2232196)
chr5 (65-123)||(7827991-7828050)
chr5 (65-123)||(19929935-19929994)
chr5 (65-123)||(21060619-21060678)
chr5 (65-123)||(27542784-27542843)
chr5 (65-125)||(4818538-4818599)
chr5 (65-125)||(29374329-29374390)
chr5 (65-125)||(29570379-29570440)
chr5 (65-125)||(41496067-41496128)
chr5 (65-123)||(42803685-42803744)
chr5 (65-125)||(6615945-6616005)
chr5 (65-123)||(1248669-1248728)
chr5 (65-123)||(8725074-8725133)
chr5 (72-125)||(9515723-9515777)
chr5 (65-125)||(11796232-11796293)
chr5 (90-126)||(41478771-41478807)
chr5 (65-123)||(27580589-27580648)
chr5 (66-124)||(41478815-41478873)
chr5 (90-125)||(41480138-41480173)
chr5 (66-124)||(41492290-41492348)
chr5 (65-125)||(15818547-15818608)
chr5 (73-113)||(39325862-39325903)
chr5 (71-122)||(30512757-30512809)
chr5 (71-122)||(30553097-30553149)
chr5 (21-73)||(38508154-38508206)
chr5 (21-73)||(41478921-41478973)
chr5 (21-73)||(41492396-41492448)
[»] chr3 (43 HSPs)
chr3 (65-125)||(12904851-12904912)
chr3 (65-123)||(10366716-10366775)
chr3 (65-123)||(37695733-37695792)
chr3 (65-123)||(39043824-39043883)
chr3 (65-125)||(36460483-36460544)
chr3 (65-125)||(43253930-43253991)
chr3 (65-120)||(19823003-19823059)
chr3 (69-123)||(1778632-1778687)
chr3 (65-123)||(29024032-29024091)
chr3 (65-123)||(30190727-30190786)
chr3 (65-123)||(36476573-36476632)
chr3 (68-125)||(44301549-44301607)
chr3 (65-117)||(23004449-23004502)
chr3 (65-117)||(45710845-45710898)
chr3 (65-123)||(3901216-3901275)
chr3 (65-123)||(17652741-17652800)
chr3 (66-123)||(37497481-37497539)
chr3 (65-125)||(8679121-8679182)
chr3 (65-125)||(11632068-11632129)
chr3 (65-125)||(12736639-12736700)
chr3 (65-125)||(51838026-51838087)
chr3 (65-123)||(3313243-3313302)
chr3 (65-123)||(11905811-11905870)
chr3 (65-127)||(34750481-34750544)
chr3 (65-123)||(37311939-37311998)
chr3 (65-126)||(19611895-19611957)
chr3 (65-121)||(24569167-24569225)
chr3 (65-125)||(33491426-33491488)
chr3 (65-126)||(49447858-49447920)
chr3 (65-125)||(38795331-38795392)
chr3 (65-125)||(40194490-40194551)
chr3 (73-121)||(41351639-41351688)
chr3 (65-120)||(34957495-34957551)
chr3 (65-123)||(5323004-5323063)
chr3 (65-123)||(37773031-37773090)
chr3 (65-119)||(38705168-38705223)
chr3 (65-119)||(54726478-54726533)
chr3 (65-122)||(28690849-28690907)
chr3 (65-119)||(54225903-54225957)
chr3 (75-123)||(14194545-14194594)
chr3 (65-125)||(30711060-30711121)
chr3 (65-125)||(38137513-38137574)
chr3 (66-125)||(40462306-40462366)
[»] scaffold0110 (1 HSPs)
scaffold0110 (65-123)||(1693-1752)
[»] scaffold0159 (1 HSPs)
scaffold0159 (65-125)||(34086-34147)
[»] scaffold0330 (1 HSPs)
scaffold0330 (65-120)||(5382-5438)
[»] scaffold0328 (1 HSPs)
scaffold0328 (65-119)||(8048-8103)
[»] scaffold0182 (1 HSPs)
scaffold0182 (65-123)||(20420-20479)
[»] scaffold0012 (1 HSPs)
scaffold0012 (65-123)||(105673-105732)
[»] scaffold1809 (1 HSPs)
scaffold1809 (69-125)||(755-812)
[»] scaffold0016 (1 HSPs)
scaffold0016 (77-125)||(76279-76328)
[»] scaffold0583 (1 HSPs)
scaffold0583 (65-123)||(2014-2073)
[»] scaffold0018 (1 HSPs)
scaffold0018 (65-126)||(136104-136166)
[»] scaffold0095 (1 HSPs)
scaffold0095 (65-125)||(50191-50252)
[»] scaffold0011 (1 HSPs)
scaffold0011 (65-125)||(14235-14296)
[»] scaffold0003 (1 HSPs)
scaffold0003 (65-123)||(252872-252930)
[»] scaffold0302 (1 HSPs)
scaffold0302 (65-121)||(16089-16146)
[»] scaffold0001 (1 HSPs)
scaffold0001 (83-123)||(143839-143880)


Alignment Details
Target: chr6 (Bit Score: 316; Significance: 1e-178; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 20 - 432
Target Start/End: Complemental strand, 15046216 - 15045804
Alignment:
Q  20 caaataatagtcgtctaagatttgtgtacgatttttacgaaagtaattaattgtagttagtggagtagttagttggatgaaattcaataaataagggtat 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15046216 caaataatagtcgtctaagatttgtgtacgatttttacgaaagtaattaattgtagttagtggagtagttagttggatgaaattcaataaataagggtat 15046117  T
Q  120 aatagtaatttgtaggcagtgtccacgggttgttttgtgtgctgacattctcggcctcgcggcacgagaagctgttcgtcaggtaatttttatttacaaa 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  15046116 aatagtaatttgtaggcagtgtccacgggttgttttgtgtgctgacatcctcggcctcgcggcacgagaagctgctcgtcaggtaatttttatttacaaa 15046017  T
Q  220 gaaaaccttagaatttaaagaacactagtggggttaaatgaagtgcataaagtaattttcatttacttcatttgatagacactggtagggtttgtatccg 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||| ||||| |||||||| |    
T  15046016 gaaaaccttagaatttaaagaacactagtggggttaaatgaagtaaataaagtaattttcatttacttcatttgagagacactagtaggatttgtatctg 15045917  T
Q  320 aaacctccgtatctaacatttgnnnnnnnaccactagatcaaatacttagagttaataannnnnnnnnnnnacattcttcaattttgaacgatcttttat 419  Q
    ||||||||||||| ||||||||       |||||||||||||||||||||| |||||||            |||||||||||||||||||||||||||||    
T  15045916 aaacctccgtatccaacatttgtttttttaccactagatcaaatacttagaattaataatttttattttttacattcttcaattttgaacgatcttttat 15045817  T
Q  420 cgtctatgttcat 432  Q
    |||||||||||||    
T  15045816 cgtctatgttcat 15045804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 181604 - 181543
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  181604 attaattatagttagtggagtagttaagttggatgaaattcaataaataagggtataatagt 181543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 11656012 - 11656071
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  11656012 attaattgtagttagtggagtagtaaagttggatgaaattcaataaataagggtataata 11656071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 65 - 126
Target Start/End: Complemental strand, 15058165 - 15058103
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagta 126  Q
    ||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||    
T  15058165 attaattgtagttagtgaagtatttaagttggatgaaattcaataaataagggtataatagta 15058103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 24983515 - 24983576
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||    
T  24983515 attaattgtagttagtggagtagttaagttgggtgaaattcaataaataagggtatattagt 24983576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 31894276 - 31894337
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    ||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||    
T  31894276 attaattgtagttagtgaagtagttaagttggatgaaatttaataaataagggtataatagt 31894337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 34657628 - 34657689
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||    
T  34657628 attaattgtagttagtggagtagttaagttggatgaaattcaataaataaatgtataatagt 34657689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 119
Target Start/End: Complemental strand, 6801979 - 6801924
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataagggtat 119  Q
    ||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||    
T  6801979 attaattgtagttagtggagtagttaagttggatgaagttcgataaataagggtat 6801924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 29363354 - 29363295
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    ||||||||||||||| ||| |||||| |||||||||||||||||||||||| ||||||||    
T  29363354 attaattgtagttagcggattagttaagttggatgaaattcaataaataagagtataata 29363295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 3291834 - 3291891
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataa 121  Q
    ||||||||||||||||| |||||||| ||||||| |||||||||||||||| ||||||    
T  3291834 attaattgtagttagtgaagtagttaagttggataaaattcaataaataagtgtataa 3291891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 3720307 - 3720368
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataagggtataatagt 125  Q
    ||||||||||||||||||| ||||| ||||| |||||||||| |||||||| ||||||||||    
T  3720307 attaattgtagttagtggaatagttaagttgaatgaaattcagtaaataagagtataatagt 3720368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 119
Target Start/End: Complemental strand, 5302399 - 5302344
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtat 119  Q
    |||||||||||||| ||||||||||| |||||||||| ||||||||||| ||||||    
T  5302399 attaattgtagttaatggagtagttaagttggatgaagttcaataaatacgggtat 5302344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 119
Target Start/End: Original strand, 11143653 - 11143708
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtat 119  Q
    ||||||| ||||||||| |||||||| |||||||||| ||||||||||||||||||    
T  11143653 attaattatagttagtgaagtagttaagttggatgaagttcaataaataagggtat 11143708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 13909472 - 13909413
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataagggtataata 123  Q
    |||||||||||||||||||||| || |||| ||||||||| |||||||||| ||||||||    
T  13909472 attaattgtagttagtggagtaattaagttagatgaaattgaataaataagagtataata 13909413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 119
Target Start/End: Complemental strand, 30716948 - 30716893
Alignment:
Q  65 attaattgtagttagtggagtagt-tagttggatgaaattcaataaataagggtat 119  Q
    ||||||||||||||||||||||||  |||||||| |||||||||||||||| ||||    
T  30716948 attaattgtagttagtggagtagtaaagttggataaaattcaataaataagagtat 30716893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 7920287 - 7920226
Alignment:
Q  65 attaattgtagttagtggagtagttagttgga-tgaaattcaataaataagggtataatagt 125  Q
    ||||||||||||||||| |||| ||| || || ||||||||||||||||| |||||||||||    
T  7920287 attaattgtagttagtgaagtatttaatttgaatgaaattcaataaataatggtataatagt 7920226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 122
Target Start/End: Original strand, 1063671 - 1063727
Alignment:
Q  67 taattgtagttagtggagtagtt-agttggatgaaattcaataaataagggtataat 122  Q
    ||||||||||||||||||||||| ||||  |||||||| ||||| ||||||||||||    
T  1063671 taattgtagttagtggagtagttaagttaaatgaaatttaataagtaagggtataat 1063727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 1781850 - 1781791
Alignment:
Q  65 attaattgtagttagtggagtagttagttggatgaaattcaataaataagggtataatagt 125  Q
    |||||||||||||||||||||  | ||||| ||||||||||||||| || |||||||||||    
T  1781850 attaattgtagttagtggagtgttaagttgaatgaaattcaataaa-aaaggtataatagt 1781791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 123
Target Start/End: Complemental strand, 21010210 - 21010162
Alignment:
Q  76 ttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    ||||||||||||||| |||||||||||||||||||||||  ||||||||    
T  21010210 ttagtggagtagttaagttggatgaaattcaataaataacagtataata 21010162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 4367319 - 4367378
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    ||||| ||||||||||| |||||||| |||| |||||||| |||||||||||| ||||||    
T  4367319 attaactgtagttagtgaagtagttaagttgcatgaaatttaataaataagggaataata 4367378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 13087578 - 13087519
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    ||||||| ||||||||| |||| ||| ||||||||||||||||||||||||  |||||||    
T  13087578 attaattatagttagtgaagtaattaagttggatgaaattcaataaataagaatataata 13087519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 33510188 - 33510129
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||||||||| ||| | ||||||||| ||||||||||||| | |||||||||||||||||    
T  33510188 attaattgtaattaattgagtagttaagttggatgaaatttattaaataagggtataata 33510129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 122
Target Start/End: Original strand, 21425635 - 21425681
Alignment:
Q  77 tagtggagtagtta-gttggatgaaattcaataaataagggtataat 122  Q
    ||||| |||||||| ||||||||||||||||||||||||| ||||||    
T  21425635 tagtgaagtagttaagttggatgaaattcaataaataaggatataat 21425681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 113
Target Start/End: Complemental strand, 22398461 - 22398412
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataa 113  Q
    |||||||||||||| || |||||||| ||| |||||||||||||||||||    
T  22398461 attaattgtagttattgaagtagttaagttagatgaaattcaataaataa 22398412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 123
Target Start/End: Original strand, 31283493 - 31283526
Alignment:
Q  90 agttggatgaaattcaataaataagggtataata 123  Q
    |||||||||||||||||||||||||| |||||||    
T  31283493 agttggatgaaattcaataaataaggatataata 31283526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 34300043 - 34299982
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    ||||||||| ||||||| |||||||| ||||||||  ||||||||||||||| |||| ||||    
T  34300043 attaattgtggttagtgaagtagttaagttggatggtattcaataaataaggatatattagt 34299982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 120
Target Start/End: Original strand, 13206898 - 13206954
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataagggtata 120  Q
    ||||||||||||||||||||| ||| | |||  || |||||||||||||||||||||    
T  13206898 attaattgtagttagtggagttgttaaattgagtgtaattcaataaataagggtata 13206954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 120
Target Start/End: Complemental strand, 17828988 - 17828932
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtata 120  Q
    ||||||||||||||||| |||| ||| ||||||||||||| ||| |||||| |||||    
T  17828988 attaattgtagttagtgaagtaattaagttggatgaaatttaattaataagagtata 17828932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 97 - 125
Target Start/End: Original strand, 27367524 - 27367552
Alignment:
Q  97 tgaaattcaataaataagggtataatagt 125  Q
    |||||||||||||||||||||||||||||    
T  27367524 tgaaattcaataaataagggtataatagt 27367552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 97 - 125
Target Start/End: Original strand, 27457871 - 27457899
Alignment:
Q  97 tgaaattcaataaataagggtataatagt 125  Q
    |||||||||||||||||||||||||||||    
T  27457871 tgaaattcaataaataagggtataatagt 27457899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 7e-22; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 21350699 - 21350760
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  21350699 attaattgtagttagtggagtagttaagttggatgaaattcaataaataagggtataatagt 21350760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 2459526 - 2459465
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  2459526 attaattgtagttagtggagtagttaagtaggatgaaattcaataaataagggtataatagt 2459465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 11373502 - 11373563
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  11373502 attaattgtagttagtggagtagttaagttggatgaaattcaataaataagagtataatagt 11373563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 65 - 120
Target Start/End: Original strand, 3178278 - 3178334
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtata 120  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  3178278 attaattgtagttagtggagtagttaagttggatgaaattcaataaataagggtata 3178334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 759165 - 759224
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  759165 attaattgtagttagcggagtagttaagttggatgaaattcaataaataagggtataata 759224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 34947555 - 34947496
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  34947555 attaattgtagttagtggagtagttaagttggatgaaattcaataaatgagggtataata 34947496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 41506139 - 41506198
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  41506139 attaattgtagttagtggagtagttaagttggatgaaattcaataaataagagtataata 41506198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 6495008 - 6495067
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||    
T  6495008 attaattgtagttagtggagtagtaaagttggatgaaatttaataaataagggtataata 6495067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 9786043 - 9785984
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    ||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||    
T  9786043 attaattgtagttagtgaagtagttaagttggataaaattcaataaataagggtataata 9785984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 19271807 - 19271866
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataagggtataata 123  Q
    ||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||    
T  19271807 attaattgtagttagtggagtagttaagttggatgaaaattaataaataagggtataata 19271866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 69 - 123
Target Start/End: Complemental strand, 21390346 - 21390291
Alignment:
Q  69 attgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  21390346 attgtagttagtggagtagttaagttagatgaaattcaataaataagggtataata 21390291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 25571474 - 25571415
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  25571474 attagttgtagttagtggaatagttaagttggatgaaattcaataaataagggtataata 25571415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 28202383 - 28202442
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||    
T  28202383 attaattgtagttagtggagtagtaaagttggatgaaattcaataaataagagtataata 28202442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 36790795 - 36790736
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||    
T  36790795 attaattgtagttagttgagtagttatgtcggatgaaattcaataaataagggtataata 36790736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 65 - 113
Target Start/End: Complemental strand, 7463268 - 7463219
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataa 113  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  7463268 attaattgtagttagtggagtagttaagttggatgaaattcaataaataa 7463219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 65 - 113
Target Start/End: Original strand, 24516363 - 24516412
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataa 113  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  24516363 attaattgtagttagtggagtagttaagttggatgaaattcaataaataa 24516412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 28103788 - 28103727
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    ||||||||||||||||| ||| |||| |||||||||||||||||||||||| ||||||||||    
T  28103788 attaattgtagttagtgaagtggttaagttggatgaaattcaataaataagcgtataatagt 28103727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 34100621 - 34100682
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    |||||||||||||| || |||||||| ||||||||| |||||||||||||||||||||||||    
T  34100621 attaattgtagttactgaagtagttaagttggatgacattcaataaataagggtataatagt 34100682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 37245745 - 37245684
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    |||||||||| | |||||||| |||| |||||||||||||||||||||||||||||||||||    
T  37245745 attaattgtaataagtggagtggttaagttggatgaaattcaataaataagggtataatagt 37245684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 46478367 - 46478428
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    |||||||||||||| | ||||||||| |||||||||||||||||||||||| ||||||||||    
T  46478367 attaattgtagttaattgagtagttaagttggatgaaattcaataaataagagtataatagt 46478428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 32346126 - 32346185
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    ||||||| || ||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  32346126 attaattataattagtggagtagttaagttgaatgaaattcaataaataagggtataata 32346185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 49101718 - 49101659
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataagggtataata 123  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||||  ||||||||    
T  49101718 attaattgtagttagtggagtagttaagttgaatgaaattcaataaataaaagtataata 49101659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 65 - 126
Target Start/End: Original strand, 8592514 - 8592576
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagta 126  Q
    |||||||||||||||||||||||| | ||| ||||||||| |||||||||| |||||||||||    
T  8592514 attaattgtagttagtggagtagtaaagttagatgaaatttaataaataagagtataatagta 8592576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 67 - 123
Target Start/End: Original strand, 21760060 - 21760117
Alignment:
Q  67 taattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||||||||||| ||||||||||| ||||||||||||||||||| | |||||||||||    
T  21760060 taattgtagttaatggagtagttaagttggatgaaattcaataattgagggtataata 21760117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 22738756 - 22738695
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    |||||||||||||||| || |||||| ||||||||||||| ||||||||| |||||||||||    
T  22738756 attaattgtagttagtagattagttaagttggatgaaatttaataaataaaggtataatagt 22738695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 65 - 124
Target Start/End: Complemental strand, 23670541 - 23670481
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataagggtataatag 124  Q
    |||||| |||||||||||||||||| |||| ||||||||| |||||||||| |||||||||    
T  23670541 attaatggtagttagtggagtagttaagtttgatgaaatttaataaataagagtataatag 23670481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 29835488 - 29835548
Alignment:
Q  65 attaattgtagttagtggagtagttagttggatgaaattcaataaataagggtataatagt 125  Q
    |||||||| |||||  |||||||||||||||||| |||||||||||||| | |||||||||    
T  29835488 attaattgcagttaacggagtagttagttggatgtaattcaataaataaagatataatagt 29835548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 65 - 120
Target Start/End: Original strand, 30546429 - 30546485
Alignment:
Q  65 attaattgtagttagtggagtagttagttgga-tgaaattcaataaataagggtata 120  Q
    |||||||||||||| |||||||||||  |||| ||||||||||||||||||||||||    
T  30546429 attaattgtagttattggagtagttaagtggagtgaaattcaataaataagggtata 30546485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 66 - 125
Target Start/End: Original strand, 47045546 - 47045606
Alignment:
Q  66 ttaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    |||||||| ||||||| |||||||| |||||||||||||||| ||||||| ||||||||||    
T  47045546 ttaattgtggttagtgtagtagttaagttggatgaaattcaacaaataagagtataatagt 47045606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 119
Target Start/End: Complemental strand, 83440 - 83385
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtat 119  Q
    ||||||||||||||| |||||||||| ||| |||||||||||||||||||| ||||    
T  83440 attaattgtagttagcggagtagttaagtttgatgaaattcaataaataagagtat 83385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 119
Target Start/End: Complemental strand, 44424199 - 44424144
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtat 119  Q
    ||||| |||||||||||||||| ||| |||||||||| ||||||||||||||||||    
T  44424199 attaaatgtagttagtggagtaattaagttggatgaagttcaataaataagggtat 44424144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 48608921 - 48608862
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||||| ||||||||||  ||||||| |||||||||||||||||||||||| ||||||||    
T  48608921 attaatcgtagttagtgatgtagttaagttggatgaaattcaataaataagagtataata 48608862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 123
Target Start/End: Complemental strand, 38391802 - 38391744
Alignment:
Q  66 ttaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||||||||||||||||| || ||| |||||||||||||||||||||||  ||||||||    
T  38391802 ttaattgtagttagtggaataattaagttggatgaaattcaataaataaaagtataata 38391744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 65 - 113
Target Start/End: Complemental strand, 13962014 - 13961965
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataa 113  Q
    ||||| ||||||||||||||||||| |||||||||||||| |||||||||    
T  13962014 attaagtgtagttagtggagtagttaagttggatgaaatttaataaataa 13961965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 16904434 - 16904373
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    ||||||| ||||||||| | || ||| ||||||| |||||||||||||||||||||||||||    
T  16904434 attaattatagttagtgaaataattaagttggatcaaattcaataaataagggtataatagt 16904373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 26974081 - 26974020
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataagggtataatagt 125  Q
    ||||||||||||||||||||||||| ||||| |||||||| | |||||||  ||||||||||    
T  26974081 attaattgtagttagtggagtagttaagttgaatgaaatttattaaataaatgtataatagt 26974020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 32018990 - 32019051
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    ||||||||| |||||||||||| ||| ||||||||||||| ||||||||||||  |||||||    
T  32018990 attaattgttgttagtggagtaattaagttggatgaaatttaataaataagggattaatagt 32019051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 33819269 - 33819208
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    ||||||||| ||| |||||||||| | |||| |||||||||| |||||||||||||||||||    
T  33819269 attaattgttgtttgtggagtagtgaagttgaatgaaattcattaaataagggtataatagt 33819208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 42796063 - 42796009
Alignment:
Q  65 attaattgtagttagtggagtagtt----agttggatgaaattcaataaataagg 115  Q
    |||||||||||||||||||||||||    |||||||||||||||| |||||||||    
T  42796063 attaattgtagttagtggagtagttgttaagttggatgaaattcattaaataagg 42796009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 63 - 125
Target Start/End: Original strand, 4958672 - 4958735
Alignment:
Q  63 taattaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    ||||||||| ||||||||| |||||||| ||| |||||| |||||| |||| ||||||||||||    
T  4958672 taattaattatagttagtgaagtagttaagtttgatgaagttcaatcaataggggtataatagt 4958735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 30866022 - 30865963
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    ||||||| || ||||||||||||||| ||| ||||||||||||||||||| | |||||||    
T  30866022 attaattataattagtggagtagttaagttagatgaaattcaataaataaagatataata 30865963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 111
Target Start/End: Complemental strand, 35333098 - 35333051
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaat 111  Q
    ||||||||||||||||||||||||| |||| |||||||||||| ||||    
T  35333098 attaattgtagttagtggagtagttaagttagatgaaattcaacaaat 35333051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 114
Target Start/End: Original strand, 31930571 - 31930623
Alignment:
Q  65 attaattgtagttagtggag--tagtt-agttggatgaaattcaataaataag 114  Q
    ||||||||||||||||||||  ||||| |||| ||||||||||||||||||||    
T  31930571 attaattgtagttagtggagtatagttaagtttgatgaaattcaataaataag 31930623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 113
Target Start/End: Complemental strand, 43873978 - 43873929
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataa 113  Q
    ||||| ||||||||||||||||||| ||||||||||| || |||||||||    
T  43873978 attaaatgtagttagtggagtagttaagttggatgaagtttaataaataa 43873929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 75 - 119
Target Start/End: Complemental strand, 14063347 - 14063303
Alignment:
Q  75 gttagtggagtagttagttggatgaaattcaataaataagggtat 119  Q
    ||||||||||||||||| ||  |||||| ||||||||||||||||    
T  14063347 gttagtggagtagttagatgattgaaatgcaataaataagggtat 14063303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 75 - 119
Target Start/End: Complemental strand, 14373375 - 14373331
Alignment:
Q  75 gttagtggagtagttagttggatgaaattcaataaataagggtat 119  Q
    ||||||||||||||||| ||  |||||| ||||||||||||||||    
T  14373375 gttagtggagtagttagatgattgaaatgcaataaataagggtat 14373331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 68 - 123
Target Start/End: Original strand, 17828428 - 17828483
Alignment:
Q  68 aattgtagttagtggagtagtt-agttggatgaaattcaataaataagggtataata 123  Q
    ||||||||||||||||||| || ||||||||| |||||||||||||| | |||||||    
T  17828428 aattgtagttagtggagtaattaagttggatg-aattcaataaataatgatataata 17828483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 7e-22; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 17237369 - 17237430
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  17237369 attaattgtagttagtggagtagttaagttggatgaaattcaataaataagggtataatagt 17237430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 33790804 - 33790863
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  33790804 attaattgtagttagtggagtagttaagttggatgaaattcaataaataagggtataata 33790863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 47464438 - 47464499
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  47464438 attaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtataatagt 47464499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 21240777 - 21240836
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  21240777 attaattgtagttagttgagtagttaagttggatgaaattcaataaataagggtataata 21240836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 49428415 - 49428474
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  49428415 attaattgtagttagtggagtaattaagttggatgaaattcaataaataagggtataata 49428474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 5841500 - 5841560
Alignment:
Q  65 attaattgtagttagtggagtagtt--agttggatgaaattcaataaataagggtataata 123  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||    
T  5841500 attaattgtagttagtggagtagtttaagttggatgaaattcaataaataaaggtataata 5841560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 6643733 - 6643794
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    ||||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||    
T  6643733 attaattgtagttagtggtatagttaagttggatgaaattcaataaataagggtataatagt 6643794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 32884849 - 32884788
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||    
T  32884849 attaattgtagttagtggagtagttaagttggatggaattcaataaataaggatataatagt 32884788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 34360703 - 34360642
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    |||||||||||||||||||||||||| |||| || |||||||||||||||||||||||||||    
T  34360703 attaattgtagttagtggagtagttaagttgaataaaattcaataaataagggtataatagt 34360642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 49176007 - 49176068
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    ||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||    
T  49176007 attaattgtagttagcggagtagttaagttggataaaattcaataaataagggtataatagt 49176068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 51624834 - 51624773
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  51624834 attatttgtagttagtggagtagttaagttggatgaaattcaataaataagggtatgatagt 51624773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 22130091 - 22130032
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||    
T  22130091 attaattgtagttagtggagtaattaagttggatgaaattcaataaataaaggtataata 22130032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 35311296 - 35311355
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||    
T  35311296 attaattgtagttagtggagtaattaagttggatgaaattcaataaataaaggtataata 35311355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 35380406 - 35380465
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||    
T  35380406 attaattgtagttagtggagtggttaagttggatgaaattcaataaataagagtataata 35380465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 38405175 - 38405234
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||    
T  38405175 attaattgtagttagtggtgtagttaagttggatgaaattcaataaataaaggtataata 38405234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 65 - 119
Target Start/End: Original strand, 47773092 - 47773147
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataagggtat 119  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  47773092 attaattgtagttagtggagtagttaagttggatgaagttcaataaataagggtat 47773147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 49747009 - 49746950
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    ||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  49747009 attaattatagttagttgagtagttaagttggatgaaattcaataaataagggtataata 49746950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 7061737 - 7061798
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    ||||||||||||||||||| || ||| |||| ||||||||||||||||||||||||||||||    
T  7061737 attaattgtagttagtggattaattaagttgaatgaaattcaataaataagggtataatagt 7061798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 16821404 - 16821465
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    ||||||| |||||||||||||| ||| |||| ||||||||||||||||||||||||||||||    
T  16821404 attaattatagttagtggagtatttaagttgaatgaaattcaataaataagggtataatagt 16821465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 18741547 - 18741608
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||  |||||||||    
T  18741547 attaattgtagttaatggagtagttaagttggatgaaattcaataaataagtttataatagt 18741608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 43237291 - 43237230
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    ||||||| ||||||||| |||||||| |||||||||||||||||||||||| ||||||||||    
T  43237291 attaattatagttagtgaagtagttaagttggatgaaattcaataaataagtgtataatagt 43237230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 65 - 122
Target Start/End: Complemental strand, 36985834 - 36985776
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataat 122  Q
    |||||||||||||||| || || ||| ||||||||||||||||||||||||||||||||    
T  36985834 attaattgtagttagtagaataattaagttggatgaaattcaataaataagggtataat 36985776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 65 - 122
Target Start/End: Original strand, 52247501 - 52247559
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataagggtataat 122  Q
    ||||||||||||||||||||||||| ||||| |||||||||| |||||||| |||||||    
T  52247501 attaattgtagttagtggagtagttaagttgaatgaaattcattaaataagtgtataat 52247559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 65 - 126
Target Start/End: Complemental strand, 53346807 - 53346745
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagta 126  Q
    ||||||| |||||||||||||||||| ||| |||||||||||||||||| | |||||||||||    
T  53346807 attaattttagttagtggagtagttaagtttgatgaaattcaataaatatgagtataatagta 53346745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 44536269 - 44536329
Alignment:
Q  65 attaattgtagttagtggagtag-ttagttggatgaaattcaataaataagggtataatagt 125  Q
    ||||||||||||||||||||||| | |||| |||||||||||| ||||||||||||||||||    
T  44536269 attaattgtagttagtggagtagctaagttagatgaaattcaa-aaataagggtataatagt 44536329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 26147688 - 26147748
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaa-attcaataaataagggtataata 123  Q
    |||||||||||||||||||||| || |||||||||||  ||||||||||||||||||||||    
T  26147688 attaattgtagttagtggagtaattaagttggatgaattttcaataaataagggtataata 26147748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 64 - 123
Target Start/End: Original strand, 31370372 - 31370432
Alignment:
Q  64 aattaattgtagttagtggagtagtt-agttggatgaaattcaataaataagggtataata 123  Q
    |||||||| ||||||||||||||||| |||||||||||| |||||||||||  ||||||||    
T  31370372 aattaattatagttagtggagtagttaagttggatgaaaatcaataaataaatgtataata 31370432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 2066837 - 2066778
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    ||||||| |||||||||| ||||||| ||| ||||||||||||||||||| |||||||||    
T  2066837 attaattttagttagtggggtagttaagttagatgaaattcaataaataaaggtataata 2066778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 6609809 - 6609750
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||||||||| ||| ||||||||||| ||||||||||| |||||||||||| ||||||||    
T  6609809 attaattgtaattattggagtagttaagttggatgaaactcaataaataagagtataata 6609750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 19265856 - 19265797
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    ||||||| |||||||||||||||||| |||| |||||||||||||| ||||||| |||||    
T  19265856 attaattatagttagtggagtagttaagttgaatgaaattcaataattaagggtgtaata 19265797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 42616976 - 42617035
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||||||||||| ||||||||||||| || | ||||||||||||||||||| ||||||||    
T  42616976 attaattgtagtaagtggagtagttaagtcgaatgaaattcaataaataagtgtataata 42617035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 50264153 - 50264212
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    ||||||||||||||||| | || ||| |||| ||||||||||||||||||||||||||||    
T  50264153 attaattgtagttagtgaaatatttaagttgaatgaaattcaataaataagggtataata 50264212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 65 - 113
Target Start/End: Original strand, 11288702 - 11288751
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataa 113  Q
    ||||||||||||| ||||||||||| |||||||| |||||||||||||||    
T  11288702 attaattgtagttggtggagtagttaagttggataaaattcaataaataa 11288751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 65 - 113
Target Start/End: Original strand, 11907672 - 11907721
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataa 113  Q
    |||||||||||||| |||||||||| ||||||||||| ||||||||||||    
T  11907672 attaattgtagttattggagtagttaagttggatgaagttcaataaataa 11907721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 43902291 - 43902238
Alignment:
Q  73 tagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    |||||||||||||| ||| |||| ||||||||||||||||||||| ||||||||    
T  43902291 tagttagtggagtaattaagttgcatgaaattcaataaataagggcataatagt 43902238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 47359022 - 47359075
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggt 117  Q
    |||||||||||| ||||||||| ||| |||| ||||||||||||||||||||||    
T  47359022 attaattgtagtcagtggagtaattaagttgaatgaaattcaataaataagggt 47359075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 53412156 - 53412095
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    ||||||| ||||| ||||| |||||| |||||||||||||||||||||||  ||||||||||    
T  53412156 attaattatagtttgtggaatagttaagttggatgaaattcaataaataaaagtataatagt 53412095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 108
Target Start/End: Original strand, 52859872 - 52859916
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaata 108  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||    
T  52859872 attaattgtagttagtggagtagttaagttgaatgaaattcaata 52859916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 68 - 123
Target Start/End: Complemental strand, 54506833 - 54506777
Alignment:
Q  68 aattgtagttagtggagtagtt-agttggatgaaattcaataaataagggtataata 123  Q
    |||||||||||||||||||||| |||| ||||||||||||| ||||||  |||||||    
T  54506833 aattgtagttagtggagtagttaagtttgatgaaattcaattaataagaatataata 54506777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 462006 - 461947
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||||||||| |||| |||||||||| |||| || |||||||| ||||||||||||||||    
T  462006 attaattgtaattagcggagtagttaagttgaataaaattcaacaaataagggtataata 461947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 2653468 - 2653409
Alignment:
Q  65 attaattgtagttagtggagtagttag-ttggatgaaattcaataaataagggtataata 123  Q
    ||||||||||||||  ||||||||||  |||||||||||| ||||||||| |||||||||    
T  2653468 attaattgtagttaaaggagtagttaaattggatgaaatttaataaataaaggtataata 2653409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 119
Target Start/End: Complemental strand, 17114488 - 17114433
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataagggtat 119  Q
    ||||||||||||||||||||||||| | ||||| ||| |||||||||||| |||||    
T  17114488 attaattgtagttagtggagtagttaatttggaggaagttcaataaataaaggtat 17114433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 122
Target Start/End: Complemental strand, 10754421 - 10754363
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataagggtataat 122  Q
    ||||||||||||||||||| || || ||||| |||||||| |||||||||| |||||||    
T  10754421 attaattgtagttagtggaataattaagttgaatgaaatttaataaataagagtataat 10754363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 122
Target Start/End: Complemental strand, 10968190 - 10968132
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataagggtataat 122  Q
    ||||||||||||||||||| || || ||||| |||||||| |||||||||| |||||||    
T  10968190 attaattgtagttagtggaataattaagttgaatgaaatttaataaataagagtataat 10968132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 118
Target Start/End: Original strand, 40122931 - 40122981
Alignment:
Q  69 attgtagttagtggagtagtta-gttggatgaaattcaataaataagggta 118  Q
    |||||||||||||||| ||||| ||| || |||||||||||||||||||||    
T  40122931 attgtagttagtggagcagttaagttcgacgaaattcaataaataagggta 40122981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 2942717 - 2942778
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataagggtataatagt 125  Q
    ||||||||||||||||||||| ||| ||||| ||||| ||||||||| || | |||||||||    
T  2942717 attaattgtagttagtggagtggttaagttgaatgaatttcaataaacaaagatataatagt 2942778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 114
Target Start/End: Original strand, 23915503 - 23915552
Alignment:
Q  65 attaattgtagttagtggagtagttagttggatgaaattcaataaataag 114  Q
    ||||||| ||||||||||||||||||| ||  |||||| |||||||||||    
T  23915503 attaattatagttagtggagtagttaggtgattgaaatacaataaataag 23915552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 121
Target Start/End: Original strand, 25142456 - 25142509
Alignment:
Q  69 attgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataa 121  Q
    |||| ||||||||  ||||||| ||||||||||||||||||||||||| |||||    
T  25142456 attgcagttagtgatgtagttaagttggatgaaattcaataaataaggatataa 25142509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 113
Target Start/End: Complemental strand, 25233229 - 25233180
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataa 113  Q
    ||||||| ||||||||| |||||||| |||||||||| ||||||||||||    
T  25233229 attaattatagttagtgaagtagttaagttggatgaagttcaataaataa 25233180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 123
Target Start/End: Original strand, 28500982 - 28501015
Alignment:
Q  90 agttggatgaaattcaataaataagggtataata 123  Q
    |||| |||||||||||||||||||||||||||||    
T  28500982 agtttgatgaaattcaataaataagggtataata 28501015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 35998859 - 35998799
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    |||||||||||||  ||||||||||| |||||||||| |||||||||||| | |||||||||    
T  35998859 attaattgtagttgatggagtagttaagttggatgaa-ttcaataaataaagatataatagt 35998799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 38663520 - 38663581
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    |||||| |||||||||  |||||||| ||||||||||||| |||||||| ||||| ||||||    
T  38663520 attaatcgtagttagtaaagtagttaagttggatgaaatttaataaatatgggtacaatagt 38663581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 113
Target Start/End: Complemental strand, 44526427 - 44526378
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataa 113  Q
    ||||||||||||||||||| |||| | ||||||||||||| |||||||||    
T  44526427 attaattgtagttagtggaatagtgaagttggatgaaatttaataaataa 44526378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 90 - 122
Target Start/End: Complemental strand, 10672675 - 10672643
Alignment:
Q  90 agttggatgaaattcaataaataagggtataat 122  Q
    ||||||||||||||||||||||||| |||||||    
T  10672675 agttggatgaaattcaataaataagagtataat 10672643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 90 - 122
Target Start/End: Complemental strand, 10886315 - 10886283
Alignment:
Q  90 agttggatgaaattcaataaataagggtataat 122  Q
    ||||||||||||||||||||||||| |||||||    
T  10886315 agttggatgaaattcaataaataagagtataat 10886283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 76 - 123
Target Start/End: Complemental strand, 35251936 - 35251888
Alignment:
Q  76 ttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    ||||||||||| ||| ||| ||||||||||||||||||||| |||||||    
T  35251936 ttagtggagtaattaagttagatgaaattcaataaataaggatataata 35251888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 7e-22; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 39864159 - 39864098
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  39864159 attaattgtagttagtggagtagttaagttggatgaaattcaataaataagggtataatagt 39864098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 6785304 - 6785243
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  6785304 attaattgtagttagtggagtagttaagtttgatgaaattcaataaataagggtataatagt 6785243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 35367850 - 35367789
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  35367850 attaattgtagttagtggagtagttaagttagatgaaattcaataaataagggtataatagt 35367789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 66 - 125
Target Start/End: Complemental strand, 9307674 - 9307614
Alignment:
Q  66 ttaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  9307674 ttaattgtagttagtggagtagttaagttggatgaaattcaataaataaaggtataatagt 9307614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 24991723 - 24991784
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||    
T  24991723 attaattgtagttagtggaatagttaagttggatgaaattcaataaataaaggtataatagt 24991784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 65 - 120
Target Start/End: Original strand, 25089156 - 25089212
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtata 120  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  25089156 attaattgtagttagtgaagtagttaagttggatgaaattcaataaataagggtata 25089212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 7759263 - 7759204
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    ||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||    
T  7759263 attaattgtagttagtggaatagttaagttgaatgaaattcaataaataagggtataata 7759204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 13579691 - 13579750
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||    
T  13579691 attaattgtagttagtggagtatttaagtttgatgaaattcaataaataagggtataata 13579750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 65 - 119
Target Start/End: Complemental strand, 15699170 - 15699115
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtat 119  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  15699170 attaattgtagttagtggagtagttaagttggatgaagttcaataaataagggtat 15699115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 65 - 119
Target Start/End: Original strand, 20209910 - 20209965
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataagggtat 119  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  20209910 attaattgtagttagtggagtagttaagttggatgaagttcaataaataagggtat 20209965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 63 - 125
Target Start/End: Original strand, 22856305 - 22856368
Alignment:
Q  63 taattaattgtagttagtggagtagtt-agttggatgaaattcaataaataagggtataatagt 125  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||  ||||||||||    
T  22856305 taattaattgtagttagtggagtagttaagctggatgaaattcaataaataaaagtataatagt 22856368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 37276509 - 37276450
Alignment:
Q  65 attaattgtagttagtggagtagttag-ttggatgaaattcaataaataagggtataata 123  Q
    ||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||    
T  37276509 attaattgtagttagtggaatagttaaattggatgaaattcaataaataagggtataata 37276450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 65 - 119
Target Start/End: Complemental strand, 37506172 - 37506117
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtat 119  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  37506172 attaattgtagttagtggagtagttaagttgaatgaaattcaataaataagggtat 37506117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 38787389 - 38787330
Alignment:
Q  65 attaattgtagttagtggagtagttag-ttggatgaaattcaataaataagggtataata 123  Q
    ||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  38787389 attaattatagttagtggagtagttaaattggatgaaattcaataaataagggtataata 38787330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 65 - 119
Target Start/End: Original strand, 49224056 - 49224111
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataagggtat 119  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  49224056 attaattgtagttagtggagtagttaagttggatgaagttcaataaataagggtat 49224111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 52429392 - 52429333
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||    
T  52429392 attaattgtagttagtggagtagttaagttgaatgaaattcattaaataagggtataata 52429333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 65 - 122
Target Start/End: Original strand, 8896402 - 8896460
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataat 122  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||    
T  8896402 attaattgtagttagtggagtggttaagttggatgaaattcaataaataaaggtataat 8896460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 12039130 - 12039069
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    |||||||||||||| ||||||| ||| |||||||| ||||||||||||||||||||||||||    
T  12039130 attaattgtagttaatggagtatttaagttggatgtaattcaataaataagggtataatagt 12039069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 14757664 - 14757725
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    ||||||||||||||||| |||||||| ||| ||||||||| |||||||||||||||||||||    
T  14757664 attaattgtagttagtgaagtagttaagttcgatgaaatttaataaataagggtataatagt 14757725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 44707830 - 44707891
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    ||||||||||||||||| || ||||| ||||||||||||||||||||||| |||||||||||    
T  44707830 attaattgtagttagtgaagcagttaagttggatgaaattcaataaataaaggtataatagt 44707891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 66 - 125
Target Start/End: Complemental strand, 37539174 - 37539114
Alignment:
Q  66 ttaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    ||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||| |||||    
T  37539174 ttaattgtagttagtagagtagttaagtttgatgaaattcaataaataagggtatcatagt 37539114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 119
Target Start/End: Original strand, 40144917 - 40144972
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtat 119  Q
    |||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||    
T  40144917 attaattgtagttaatggagtagttaagttggatgaagttcaataaataagggtat 40144972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 66 - 123
Target Start/End: Original strand, 16395117 - 16395175
Alignment:
Q  66 ttaattgtagttagtggagtagtt-agttggatgaaattcaataaataagggtataata 123  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||| | |||||||    
T  16395117 ttaattgtagttagtggagtagttaagttagatgaaattcaataaataatgatataata 16395175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 80 - 125
Target Start/End: Original strand, 35682879 - 35682925
Alignment:
Q  80 tggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||    
T  35682879 tggagtagttaagttggatgaaattcaataaataagggtataatagt 35682925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 113
Target Start/End: Complemental strand, 2572517 - 2572468
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataa 113  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  2572517 attaattgtagttagtggagtagttaagttgaatgaaattcaataaataa 2572468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 6023719 - 6023780
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    |||||||||||||| ||||||||||| |||||||||||||||||| || || ||||||||||    
T  6023719 attaattgtagttattggagtagttaagttggatgaaattcaatacatgagagtataatagt 6023780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 113
Target Start/End: Complemental strand, 10495887 - 10495838
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataa 113  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  10495887 attaattgtaattagtggagtagttaagttggatgaaattcaataaataa 10495838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 24880924 - 24880862
Alignment:
Q  65 attaattgtagttagtggagtagtt----agttggatgaaattcaataaataagggtataata 123  Q
    |||||||||||||||||||||||||    |||||||||||||||||||||| ||| |||||||    
T  24880924 attaattgtagttagtggagtagttagtaagttggatgaaattcaataaattaggatataata 24880862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 27897003 - 27896942
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataagggtataatagt 125  Q
    ||||||| |||||||||||||| || |||||||||||||| ||||||||| |||||||||||    
T  27897003 attaattatagttagtggagtaatttagttggatgaaatttaataaataaaggtataatagt 27896942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 65 - 128
Target Start/End: Original strand, 44761601 - 44761665
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagtaat 128  Q
    ||||||| ||||||||||| | |||| |||| |||||||||||||||||||||||||||| ||||    
T  44761601 attaattatagttagtggaatggttaagttgaatgaaattcaataaataagggtataataataat 44761665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 26093442 - 26093383
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    ||||||||||||||||| |||| ||| ||| |||||| ||||||||||||||||||||||    
T  26093442 attaattgtagttagtgaagtaattaagttagatgaagttcaataaataagggtataata 26093383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 33733332 - 33733391
Alignment:
Q  65 attaattgtagttagtggagtagttagttgga-tgaaattcaataaataagggtataata 123  Q
    |||||||||||||||| |||| ||||| | || |||||||||||||||||||||||||||    
T  33733332 attaattgtagttagtagagtggttaggtagaatgaaattcaataaataagggtataata 33733391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 36701969 - 36701910
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    ||||||||||||||||||| | |||| ||| |||||||||||||||||||| ||||||||    
T  36701969 attaattgtagttagtggaatcgttaagtttgatgaaattcaataaataagagtataata 36701910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 36718073 - 36718014
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    ||||||||||||||||||| | |||| ||| |||||||||||||||||||| ||||||||    
T  36718073 attaattgtagttagtggaatcgttaagtttgatgaaattcaataaataagagtataata 36718014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 126
Target Start/End: Complemental strand, 3260639 - 3260577
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataagggtataatagta 126  Q
    |||||||||||||||||||| |||| |||| ||||||||| ||||||||||  ||||||||||    
T  3260639 attaattgtagttagtggagaagttaagtttgatgaaattgaataaataagtttataatagta 3260577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 4659816 - 4659763
Alignment:
Q  73 tagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    |||||||||||||| ||| |||| |||||||||||||||||||| |||||||||    
T  4659816 tagttagtggagtaattaagttgaatgaaattcaataaataaggatataatagt 4659763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 917072 - 917013
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||||||||||||||| || |||||| |||| |||||||| |||||||||||||| ||||    
T  917072 attaattgtagttagtagattagttaagttgcatgaaatttaataaataagggtaaaata 917013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 6160529 - 6160588
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||||||||||||| |||| |||||| |||| ||| ||||||||||| ||||||||||||    
T  6160529 attaattgtagttaatggaatagttaagttgaatgtaattcaataaacaagggtataata 6160588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 30755011 - 30755070
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    ||||||| ||||||||| | |||||| ||| ||||||||||||||||||| |||||||||    
T  30755011 attaattatagttagtgaaatagttaagttagatgaaattcaataaataaaggtataata 30755070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 31978722 - 31978781
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    ||||||| |||||| ||||||||||| |||| || ||||||| |||||||||||||||||    
T  31978722 attaattatagttaatggagtagttaagttgaattaaattcattaaataagggtataata 31978781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 34031597 - 34031656
Alignment:
Q  65 attaattgtagttagtggagtagttag-ttggatgaaattcaataaataagggtataata 123  Q
    ||||||||||||||||| | |||| || ||| ||||||||||||||||||| ||||||||    
T  34031597 attaattgtagttagtgtaatagtaaggttgaatgaaattcaataaataagagtataata 34031656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 52837328 - 52837269
Alignment:
Q  65 attaattgtagttagtggagtagttagt-tggatgaaattcaataaataagggtataata 123  Q
    ||||||||||| |||||||||||||| | || |||||||||||||| ||| |||||||||    
T  52837328 attaattgtagctagtggagtagttaatatgaatgaaattcaataattaaaggtataata 52837269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 123
Target Start/End: Original strand, 4441674 - 4441732
Alignment:
Q  66 ttaattgtagttagtggagtagtt-agttggatgaaattcaataaataagggtataata 123  Q
    ||||||||||||||||||||| || | || ||||||||| ||||||||| |||||||||    
T  4441674 ttaattgtagttagtggagtaattaaattagatgaaatttaataaataaaggtataata 4441732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 5179469 - 5179526
Alignment:
Q  65 attaattgtagttagtggagtag-ttagttggatgaaattcaataaataagggtataa 121  Q
    ||||||||||||||||||||||| | | ||||||||||||||  ||||||| ||||||    
T  5179469 attaattgtagttagtggagtagataaattggatgaaattcaggaaataagagtataa 5179526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 113
Target Start/End: Original strand, 9412873 - 9412922
Alignment:
Q  65 attaattgtagttagtggagtagttag-ttggatgaaattcaataaataa 113  Q
    |||||||||||||| |||| ||||| | ||||||||||||||||||||||    
T  9412873 attaattgtagttaatggaatagttgggttggatgaaattcaataaataa 9412922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 27721580 - 27721519
Alignment:
Q  65 attaattgtagttagtggagtagttag-ttggatgaaattcaataaataagggtataatagt 125  Q
    |||||||||||||||| || ||||||  |||||| |||||||||||||||  ||||||||||    
T  27721580 attaattgtagttagtagaatagttaaattggataaaattcaataaataaaagtataatagt 27721519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 28749039 - 28748978
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    |||||||||| ||||| || | |||| |||||||||||||  ||||||||||||||||||||    
T  28749039 attaattgtaattagtagaattgttaagttggatgaaattttataaataagggtataatagt 28748978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 6160431 - 6160483
Alignment:
Q  21 aaataatagtcgtctaagatttgtgtacgatttttacgaaagtaattaattgt 73  Q
    ||||||||||||| || || |||||||||||||||| |||| | |||||||||    
T  6160431 aaataatagtcgtttacgacttgtgtacgatttttaagaaaatgattaattgt 6160483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 9379280 - 9379220
Alignment:
Q  65 attaattgtagttagt-ggagtagtt-agttggatgaaattcaataaataagggtataata 123  Q
    |||||||||||||||| ||||||||| |||| ||||||||| ||||||||  |||||||||    
T  9379280 attaattgtagttagtgggagtagttaagtttgatgaaatttaataaatataggtataata 9379220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 125
Target Start/End: Original strand, 26256159 - 26256219
Alignment:
Q  66 ttaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    ||||||||||||| | ||||||||| ||||||||||| |||||||| |||  |||||||||    
T  26256159 ttaattgtagttaatagagtagttaagttggatgaaagtcaataaagaagaatataatagt 26256219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 119
Target Start/End: Original strand, 32826061 - 32826119
Alignment:
Q  65 attaattgtagttagtggag---tagtta-gttggatgaaattcaataaataagggtat 119  Q
    |||||||||| |||||||||   |||||| |||||||||| ||||||||||||||||||    
T  32826061 attaattgtaattagtggaggagtagttaagttggatgaagttcaataaataagggtat 32826119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 41080646 - 41080587
Alignment:
Q  65 attaattgtagttagtggagtagttagttggatgaaattcaataaataagggtataatagt 125  Q
    |||||||||| |||||||||  || ||||||||| |||||||||||||| ||||| |||||    
T  41080646 attaattgtaattagtggagaggtaagttggatg-aattcaataaataaaggtatgatagt 41080587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 1e-20; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 21 - 123
Target Start/End: Original strand, 5272160 - 5272263
Alignment:
Q  21 aaataatagtcgtctaagatttgtgtacgatttttacgaaagtaattaattgtagttagtggagtagttag-ttggatgaaattcaataaataagggtat 119  Q
    ||||||||||||| |||| |||  | |||||| ||| | || |||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  5272160 aaataatagtcgtttaaggtttacgcacgattattaaggaaataattaattgtagttagtggagtaattaaattggatgaaattcaataaataagggtat 5272259  T
Q  120 aata 123  Q
    ||||    
T  5272260 aata 5272263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 8947117 - 8947176
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8947117 attaattatagttagtggagtagttaagttggatgaaattcaataaataagggtataata 8947176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 36354508 - 36354567
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  36354508 attaattgtagttagtggagtagttaagttggatgaaattcaataaataatggtataata 36354567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 37322476 - 37322417
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  37322476 attaattgtagttagtggagtagttaagttagatgaaattcaataaataagggtataata 37322417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 17695378 - 17695317
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    ||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  17695378 attaattatagttagtagagtagttaagttggatgaaattcaataaataagggtataatagt 17695317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 35313935 - 35313874
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||    
T  35313935 attaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagt 35313874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 9458331 - 9458390
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||    
T  9458331 attaattgtagttagtggagtagtaaagttggatgaaatttaataaataagggtataata 9458390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 65 - 119
Target Start/End: Original strand, 15359152 - 15359207
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataagggtat 119  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  15359152 attaattgtagttagtggagtagttaagttggatgaagttcaataaataagggtat 15359207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 3323337 - 3323398
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataagggtataatagt 125  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| |||| || |||||||    
T  3323337 attaattgtagttagtggagtagttaagttggatgaaattcaataagtaagagtgtaatagt 3323398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 5789713 - 5789774
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    ||||||||||||||||| | |||||| ||||||||||||||||||||||| |||||||||||    
T  5789713 attaattgtagttagtgaaatagttaagttggatgaaattcaataaataatggtataatagt 5789774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 7494909 - 7494962
Alignment:
Q  71 tgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  7494909 tgtagttagcggagtagttaagttggatgaaattcaataaataagggtataata 7494962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 35242362 - 35242423
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||  ||||||||||    
T  35242362 attaattgtagttagttgagtagttaagttggatgaaattcaataaataaaagtataatagt 35242423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 14523437 - 14523496
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataagggtataata 123  Q
    ||||||||||||||||||||||||| |||| ||||||||||||| ||||||| |||||||    
T  14523437 attaattgtagttagtggagtagttaagttagatgaaattcaattaataaggatataata 14523496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 19937433 - 19937374
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataagggtataata 123  Q
    ||||||||||||||||||||||||| ||||| || ||||||||||||||| |||||||||    
T  19937433 attaattgtagttagtggagtagttaagttgaataaaattcaataaataaaggtataata 19937374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 34120502 - 34120561
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||| |||| ||||||||    
T  34120502 attaattgtagttagtggaatagttaagttggatgaaattcaataagtaagagtataata 34120561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 119
Target Start/End: Complemental strand, 36794332 - 36794277
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtat 119  Q
    ||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  36794332 attaactgtagttagtggagtagttaagttggatgaagttcaataaataagggtat 36794277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 39691538 - 39691479
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||||||| ||||||||||||||| | |||| ||||||||||||||||||||||||||||    
T  39691538 attaattgcagttagtggagtagtaaagttgaatgaaattcaataaataagggtataata 39691479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 119
Target Start/End: Complemental strand, 39785633 - 39785578
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtat 119  Q
    |||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||    
T  39785633 attaattgtagttaatggagtagttaagttggatgaagttcaataaataagggtat 39785578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 7438917 - 7438978
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    ||||||| || ||| ||||||||||| |||| ||||||||||||||||||||||||||||||    
T  7438917 attaattataattattggagtagttaagttgaatgaaattcaataaataagggtataatagt 7438978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 16377721 - 16377786
Alignment:
Q  65 attaattgtagttagtggagtagtta-----gttggatgaaattcaataaataagggtataatagt 125  Q
    ||||||||||||||||||||||||||     |||||||||||||||||||||||  ||||||||||    
T  16377721 attaattgtagttagtggagtagttaattaagttggatgaaattcaataaataaaagtataatagt 16377786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 113
Target Start/End: Original strand, 17346427 - 17346476
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataa 113  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  17346427 attaattgtagttagtggagtagttaagttggaagaaattcaataaataa 17346476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 26863423 - 26863484
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataagggtataatagt 125  Q
    ||||||||||||||||||||||||| ||| |||||||||||| |||||||  ||||||||||    
T  26863423 attaattgtagttagtggagtagttaagtcggatgaaattcattaaataaatgtataatagt 26863484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 119
Target Start/End: Original strand, 11742593 - 11742648
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataagggtat 119  Q
    |||||||||||||| |||||||||| |||| |||||| ||||||||||||||||||    
T  11742593 attaattgtagttaatggagtagttaagtttgatgaagttcaataaataagggtat 11742648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 25637529 - 25637470
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    ||||||||||||||  |||||||||| ||||||||||||| ||||||||||||| |||||    
T  25637529 attaattgtagttataggagtagttaagttggatgaaatttaataaataagggtgtaata 25637470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 34225638 - 34225579
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||||||||||||| ||||||| ||| |||| |||||||| |||||||||||||||||||    
T  34225638 attaattgtagttaatggagtatttaagttgaatgaaatttaataaataagggtataata 34225579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 43410474 - 43410415
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||||||||||||| ||||||||||| |||| |||||||||||||||| || ||||||||    
T  43410474 attaattgtagttaatggagtagttaagttgaatgaaattcaataaatgagagtataata 43410415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 118
Target Start/End: Original strand, 31448760 - 31448812
Alignment:
Q  67 taattgtagttagtggagtagtta-gttggatgaaattcaataaataagggta 118  Q
    |||||| |||||||| | |||||| ||||||||||||||||||||||||||||    
T  31448760 taattgcagttagtgaaatagttaagttggatgaaattcaataaataagggta 31448812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 120
Target Start/End: Original strand, 32831240 - 32831296
Alignment:
Q  65 attaattgtagttagtggagtagttagttg-gatgaaattcaataaataagggtata 120  Q
    |||||||||||||| |||||||||||  || ||||||||||||||||||| ||||||    
T  32831240 attaattgtagttattggagtagttaaatgagatgaaattcaataaataatggtata 32831296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 16463737 - 16463678
Alignment:
Q  65 attaattgtagttagtggagtagt-tagttggatgaaattcaataaataagggtataata 123  Q
    ||||||||||||||||||||||||  |||| ||||||||| ||||||||| |||| ||||    
T  16463737 attaattgtagttagtggagtagtaaagtttgatgaaatttaataaataatggtaaaata 16463678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 17123032 - 17122973
Alignment:
Q  65 attaattgtagttagtggagtagttag-ttggatgaaattcaataaataagggtataata 123  Q
    |||||||||| ||||| |||| ||||| || |||||||||||||||||||| ||||||||    
T  17123032 attaattgtaattagttgagttgttagattagatgaaattcaataaataagagtataata 17122973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 123
Target Start/End: Original strand, 43115871 - 43115926
Alignment:
Q  69 attgtagttagtggagtagtt-agttggatgaaattcaataaataagggtataata 123  Q
    ||||||||||||||||||||| ||||| |||||||||||  ||||| |||||||||    
T  43115871 attgtagttagtggagtagttaagttgaatgaaattcaacgaataatggtataata 43115926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 76 - 125
Target Start/End: Original strand, 43699672 - 43699722
Alignment:
Q  76 ttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    ||||||||||| ||| ||||||| |||||||||||| ||||||||||||||    
T  43699672 ttagtggagtaattaagttggataaaattcaataaacaagggtataatagt 43699722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 113
Target Start/End: Original strand, 39329729 - 39329777
Alignment:
Q  65 attaattgtagttagtggagtagttag-ttggatgaaattcaataaataa 113  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||||    
T  39329729 attaattgtagtta-tggagtagttaaattggatgaaattcaataaataa 39329777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 116
Target Start/End: Complemental strand, 16805929 - 16805877
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataaggg 116  Q
    ||||||||||||||||||||| ||| |||||||| ||||| |||| |||||||    
T  16805929 attaattgtagttagtggagttgttaagttggattaaatttaatagataaggg 16805877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 116
Target Start/End: Complemental strand, 16845210 - 16845158
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataaggg 116  Q
    ||||||||||||||||||||| ||| |||||||| ||||| |||| |||||||    
T  16845210 attaattgtagttagtggagttgttaagttggattaaatttaatagataaggg 16845158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 113
Target Start/End: Complemental strand, 18202152 - 18202104
Alignment:
Q  66 ttaattgtagttagtggagtagtta-gttggatgaaattcaataaataa 113  Q
    |||| ||||||||||| |||||||| ||||||||||||| |||||||||    
T  18202152 ttaaatgtagttagtgaagtagttaagttggatgaaatttaataaataa 18202104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 120
Target Start/End: Complemental strand, 45235629 - 45235573
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtata 120  Q
    |||||||||||||| || | |||||| ||| ||||||||||||||||||||| ||||    
T  45235629 attaattgtagttaatgaaatagttaagtttgatgaaattcaataaataaggatata 45235573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 2e-19; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 44761562 - 44761623
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  44761562 attaattgtagttagtggagtagttaagttggatgaaattcaataaatgagggtataatagt 44761623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 45425734 - 45425795
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    |||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||    
T  45425734 attaattgtagttagtggagtaattaagttgtatgaaattcaataaataagggtataatagt 45425795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 22771903 - 22771962
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    ||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||    
T  22771903 attaattgtagttagtgaagtaattatgttggatgaaattcaataaataagggtataata 22771962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 29226596 - 29226655
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataagggtataata 123  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||    
T  29226596 attaattgtagttagtggagtagttaagttagatgaaattcaataaataagggtacaata 29226655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 34948755 - 34948806
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataagg 115  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  34948755 attaattgtagttagtggagtagttaagttggatgaaattcaataaataagg 34948806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 7172962 - 7172901
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    |||||||||||||| || |||||||| |||| ||||||||||||||||||||||||||||||    
T  7172962 attaattgtagttaatgaagtagttaagttgaatgaaattcaataaataagggtataatagt 7172901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 9300181 - 9300242
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    ||||||| |||||||||||||||||| |||| |||||||||||||||||||| |||||||||    
T  9300181 attaattttagttagtggagtagttaagttgaatgaaattcaataaataaggatataatagt 9300242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 65 - 124
Target Start/End: Original strand, 11977004 - 11977064
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatag 124  Q
    |||||||||||||||| ||||||||| ||| ||||||||||||||||||| ||||||||||    
T  11977004 attaattgtagttagtagagtagttaagttagatgaaattcaataaataaaggtataatag 11977064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 65 - 120
Target Start/End: Complemental strand, 31271069 - 31271013
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtata 120  Q
    ||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  31271069 attaattatagttagtggagtagttaagttggataaaattcaataaataagggtata 31271013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 10180015 - 10180074
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataagggtataata 123  Q
    ||||||||||||||||||||||||| ||||| |||||||||||| |||||| ||||||||    
T  10180015 attaattgtagttagtggagtagttaagttgaatgaaattcaattaataagtgtataata 10180074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 17719326 - 17719385
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    ||||||| |||||||||||||||||| ||||||||||||| ||||||||| |||||||||    
T  17719326 attaattatagttagtggagtagttaagttggatgaaatttaataaataaaggtataata 17719385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 126
Target Start/End: Original strand, 21216169 - 21216229
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataagggtataatagta 126  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||  || ||||||||||||    
T  21216169 attaattgtagttagtggagtagttaagttggatgaaattcaataa--aatggtataatagta 21216229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 26626180 - 26626239
Alignment:
Q  65 attaattgtagttagtggagtagttag-ttggatgaaattcaataaataagggtataata 123  Q
    ||||||||||||||||||||||||  | ||| ||||||||||||||||||||||||||||    
T  26626180 attaattgtagttagtggagtagtccggttgaatgaaattcaataaataagggtataata 26626239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 31082667 - 31082608
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    ||||||| |||||||||||||||||| ||||||||||||| ||||||||| |||||||||    
T  31082667 attaattatagttagtggagtagttaagttggatgaaatttaataaataaaggtataata 31082608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 119
Target Start/End: Complemental strand, 31231778 - 31231723
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataagggtat 119  Q
    ||||||||||||||||||||||||| |||||||| || ||||||||||||||||||    
T  31231778 attaattgtagttagtggagtagttaagttggataaagttcaataaataagggtat 31231723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 32678451 - 32678392
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataagggtataata 123  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||  |||||||    
T  32678451 attaattgtagttagtggagtagttaagttggatgaaattaaataaataagaatataata 32678392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 65 - 122
Target Start/End: Complemental strand, 42887048 - 42886990
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataat 122  Q
    |||||||||||||||||| ||||||| ||||||| |||||||||||||||| |||||||    
T  42887048 attaattgtagttagtggcgtagttaagttggataaaattcaataaataagagtataat 42886990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 113
Target Start/End: Original strand, 10098059 - 10098108
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataa 113  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  10098059 attaattgtagttagtggagtagttaagttggatgaagttcaataaataa 10098108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 14855002 - 14855063
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    |||||||||||||||||||||||||| | || ||||||||||||||| || |||||||||||    
T  14855002 attaattgtagttagtggagtagttaggctgaatgaaattcaataaagaatggtataatagt 14855063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 17823969 - 17823908
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    ||||||||||||||||| |||||||| ||||||||||||| |||||||||  ||||||||||    
T  17823969 attaattgtagttagtgaagtagttaagttggatgaaattaaataaataatagtataatagt 17823908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 32476335 - 32476278
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataa 121  Q
    |||||||||||||| || |||||||| ||| |||||||||||||||||||||||||||    
T  32476335 attaattgtagttaatgaagtagttaagtttgatgaaattcaataaataagggtataa 32476278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 5053221 - 5053280
Alignment:
Q  65 attaattgtagttagtggagtagttag-ttggatgaaattcaataaataagggtataata 123  Q
    ||||||||||||||| ||||||||||  |||||||| |||||||||||||| ||||||||    
T  5053221 attaattgtagttagcggagtagttaaattggatgagattcaataaataagagtataata 5053280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 13335264 - 13335205
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||||||| ||||||| ||||||||| ||| ||||||||||||||||| |||||||||||    
T  13335264 attaattgcagttagtagagtagttaagtttgatgaaattcaataaatcagggtataata 13335205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 39301024 - 39301083
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataagggtataata 123  Q
    ||||||||||||||||| ||||||| ||||| ||||||||||||||||||  ||||||||    
T  39301024 attaattgtagttagtgaagtagttcagttgaatgaaattcaataaataaaagtataata 39301083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 39482663 - 39482604
Alignment:
Q  65 attaattgtagttagtggagtagttagttgga-tgaaattcaataaataagggtataata 123  Q
    ||||||| ||||||||||| ||||||  |||| |||||||||||||||||||||||||||    
T  39482663 attaattatagttagtggactagttaagtggaatgaaattcaataaataagggtataata 39482604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 4428419 - 4428480
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    ||||||||||||||||| | |||||| ||| |||||||||||||||||||  ||||||||||    
T  4428419 attaattgtagttagtgaattagttaagttagatgaaattcaataaataaaagtataatagt 4428480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 65 - 113
Target Start/End: Original strand, 27294127 - 27294176
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataa 113  Q
    |||||||| ||||||||||||| ||| |||||||||||||||||||||||    
T  27294127 attaattgcagttagtggagtaattaagttggatgaaattcaataaataa 27294176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 36006955 - 36007016
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    |||||||||||||||||| ||| ||| ||| |||||||||||||||||||| | ||||||||    
T  36006955 attaattgtagttagtggggtaattaagtttgatgaaattcaataaataagagcataatagt 36007016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 39405810 - 39405749
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    |||||||  ||||||||||||| ||| |||| |||||||| |||||||||||||||||||||    
T  39405810 attaattacagttagtggagtaattaagttgaatgaaattaaataaataagggtataatagt 39405749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 43719304 - 43719365
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    ||||||| |||||||| || || ||| ||||||||||||||||||||||| |||||||||||    
T  43719304 attaattatagttagttgaataattaagttggatgaaattcaataaataaaggtataatagt 43719365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 116
Target Start/End: Original strand, 40996433 - 40996485
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataaggg 116  Q
    ||||||||||||||||| | | |||| ||||||||||||||||||||||||||    
T  40996433 attaattgtagttagtgaaatggttaagttggatgaaattcaataaataaggg 40996485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 396679 - 396738
Alignment:
Q  65 attaattgtagttagtggagtagttag-ttggatgaaattcaataaataagggtataata 123  Q
    |||||||||||||| || ||||||||  |||||| ||||||||| |||||||||||||||    
T  396679 attaattgtagttaatgaagtagttatattggataaaattcaattaataagggtataata 396738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 6796397 - 6796460
Alignment:
Q  65 attaattgtagttagtggagtagtt-----agttggatgaaattcaataaataagggtataata 123  Q
    |||||||||||||||||||||||||     ||||| || ||||||| |||||||||||||||||    
T  6796397 attaattgtagttagtggagtagttaattaagttgaataaaattcattaaataagggtataata 6796460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 35732169 - 35732110
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||||||||| ||||||||||||| | ||| |||||||||||||| ||||| ||||||||    
T  35732169 attaattgtaattagtggagtagtaaagttagatgaaattcaatatataagagtataata 35732110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 1739591 - 1739534
Alignment:
Q  65 attaattgtagttagtggagtagttagttg-gatgaaattcaataaataagggtataa 121  Q
    ||||||||||||||||  |||||||| ||  ||||||||| |||||||||||||||||    
T  1739591 attaattgtagttagttaagtagttaattttgatgaaatttaataaataagggtataa 1739534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 4924135 - 4924196
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    |||||||||||||| | ||||||||| |||| |||||| | |||||||||||||||| ||||    
T  4924135 attaattgtagttaatagagtagttaagttgaatgaaacttaataaataagggtatattagt 4924196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 10953813 - 10953862
Alignment:
Q  75 gttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||||||||||||||| ||| ||| |||||||||| ||||||||||||||    
T  10953813 gttagtggagtagttaagttagatcaaattcaatatataagggtataata 10953862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 10961818 - 10961867
Alignment:
Q  75 gttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||||||||||||||| ||| ||| |||||||||| ||||||||||||||    
T  10961818 gttagtggagtagttaagttagatcaaattcaatatataagggtataata 10961867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 2e-19; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 8698357 - 8698296
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  8698357 attaattgtagttagtggagtggttaagttggatgaaattcaataaataagggtataatagt 8698296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 22848449 - 22848510
Alignment:
Q  65 attaattgtagttagtggagtagttag-ttggatgaaattcaataaataagggtataatagt 125  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  22848449 attaattgtagttaatggagtagttagattggatgaaattcaataaataagggtataatagt 22848510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 65 - 120
Target Start/End: Complemental strand, 6754077 - 6754021
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtata 120  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  6754077 attaattgtagttagtggagtagttaagttggatgaaattcaataaataagggtata 6754021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 6315842 - 6315901
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  6315842 attaattgtagttagtgaagtagttaagttggatgaaattcaataaataagggtataata 6315901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 6753723 - 6753782
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  6753723 attaattgtagttagtggagtagttaagttggatgaaatttaataaataagggtataata 6753782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 40899966 - 40899907
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  40899966 attaattgtagttagtggagtagttaagttagatgaaattcaataaataagggtataata 40899907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 65 - 126
Target Start/End: Complemental strand, 4441069 - 4441007
Alignment:
Q  65 attaattgtagttagtggagtagttag-ttggatgaaattcaataaataagggtataatagta 126  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||    
T  4441069 attaattgtagttagtggagtagttaaattggatgaaattcaataaataacggtataatagta 4441007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 31655101 - 31655040
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    |||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||    
T  31655101 attaattgtagttagtggagtaattatgttgaatgaaattcaataaataagggtataatagt 31655040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 40530289 - 40530350
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    ||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||||||||    
T  40530289 attaattgtagttagtggagtggttaagttggatgaaattaaataaataagggtataatagt 40530350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 76 - 126
Target Start/End: Original strand, 2232145 - 2232196
Alignment:
Q  76 ttagtggagtagtta-gttggatgaaattcaataaataagggtataatagta 126  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  2232145 ttagtggagtagttaagttggatgaaattcaataaataagggtataatagta 2232196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 7827991 - 7828050
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataagggtataata 123  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||    
T  7827991 attaattgtagttagtggagtagttaagttggatgaaatttaataaataaggatataata 7828050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 19929994 - 19929935
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    ||||||||||||||||| | |||||| |||||||||||||||||||||||||||||||||    
T  19929994 attaattgtagttagtgaaatagttaagttggatgaaattcaataaataagggtataata 19929935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 21060678 - 21060619
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||    
T  21060678 attaattgtagttagtggagtagttaagttggataaaattcaataaataatggtataata 21060619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 27542843 - 27542784
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||    
T  27542843 attaattgtagttagtggagtagttaagttggataaaattcaataaataagagtataata 27542784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 4818599 - 4818538
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    |||||||||||||||||||||  ||| ||| |||||||||||||||||||||||||||||||    
T  4818599 attaattgtagttagtggagtgattaagttagatgaaattcaataaataagggtataatagt 4818538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 29374390 - 29374329
Alignment:
Q  65 attaattgtagttagtggagtagttag-ttggatgaaattcaataaataagggtataatagt 125  Q
    ||||||||||||||||||||||||||  ||| || |||||||||||||||||||||||||||    
T  29374390 attaattgtagttagtggagtagttaaattgaataaaattcaataaataagggtataatagt 29374329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 29570440 - 29570379
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    |||||||||||||| |||| |||||| |||||||||||||||||||||||| ||||||||||    
T  29570440 attaattgtagttaatggaatagttaagttggatgaaattcaataaataagagtataatagt 29570379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 41496128 - 41496067
Alignment:
Q  65 attaattgtagttagtggagtagttag-ttggatgaaattcaataaataagggtataatagt 125  Q
    ||||||||||||||||||||||||||  ||||||||||| |||||||||| |||||||||||    
T  41496128 attaattgtagttagtggagtagttaaattggatgaaatgcaataaataaaggtataatagt 41496067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 42803685 - 42803744
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||||||||||||| |||||| |||| |||||||||||||||||||||||| ||||||||    
T  42803685 attaattgtagttaatggagtggttaagttggatgaaattcaataaataagagtataata 42803744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 6615945 - 6616005
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    ||||||| ||||||||||||| |||| |||||||||| ||||||||||||||||||||||||    
T  6615945 attaattttagttagtggagtggttaagttggatgaa-ttcaataaataagggtataatagt 6616005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 1248669 - 1248728
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataagggtataata 123  Q
    ||||||||||||||||| ||||||| ||||| || ||||||||| |||||||||||||||    
T  1248669 attaattgtagttagtgaagtagttaagttgaataaaattcaattaataagggtataata 1248728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 8725074 - 8725133
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataagggtataata 123  Q
    ||||||||||||||||||||||||| | ||| ||||||||||||||||||  ||||||||    
T  8725074 attaattgtagttagtggagtagttaacttgaatgaaattcaataaataatagtataata 8725133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 9515777 - 9515723
Alignment:
Q  72 gtagttagtggagtagtt-agttggatgaaattcaataaataagggtataatagt 125  Q
    |||||||||||||||||| ||||| |||||||||| |||||||| ||||||||||    
T  9515777 gtagttagtggagtagttaagttgaatgaaattcattaaataagagtataatagt 9515723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 11796232 - 11796293
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataagggtataatagt 125  Q
    ||||||||||||||||| ||||||| |||| ||||||||| |||||||||| ||||| ||||    
T  11796232 attaattgtagttagtgtagtagttaagttagatgaaatttaataaataagagtatactagt 11796293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 90 - 126
Target Start/End: Complemental strand, 41478807 - 41478771
Alignment:
Q  90 agttggatgaaattcaataaataagggtataatagta 126  Q
    |||||||||||||||||||||||| ||||||||||||    
T  41478807 agttggatgaaattcaataaataaaggtataatagta 41478771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 27580648 - 27580589
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataagggtataata 123  Q
    ||||||||||||||||||||||||| ||||| |||||||| | |||||||  ||||||||    
T  27580648 attaattgtagttagtggagtagttaagttgaatgaaattaattaaataaatgtataata 27580589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 124
Target Start/End: Complemental strand, 41478873 - 41478815
Alignment:
Q  66 ttaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatag 124  Q
    ||||||| ||||| |||| |||||| ||| ||||||||||||||||||||||||||||||    
T  41478873 ttaattgcagttaatgga-tagttaagttagatgaaattcaataaataagggtataatag 41478815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 90 - 125
Target Start/End: Complemental strand, 41480173 - 41480138
Alignment:
Q  90 agttggatgaaattcaataaataagggtataatagt 125  Q
    |||||||||||||||||||||||| |||||||||||    
T  41480173 agttggatgaaattcaataaataaaggtataatagt 41480138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 124
Target Start/End: Complemental strand, 41492348 - 41492290
Alignment:
Q  66 ttaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatag 124  Q
    |||| |||||||| |||| |||||| ||| ||||||||||||||||||||||||||||||    
T  41492348 ttaaatgtagttaatgga-tagttaagttagatgaaattcaataaataagggtataatag 41492290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 15818547 - 15818608
Alignment:
Q  65 attaattgtagttagtggagtagttag-ttggatgaaattcaataaataagggtataatagt 125  Q
    |||||||||| | |||||||||||||  |||||||||||| ||||||||| || ||||||||    
T  15818547 attaattgtaatcagtggagtagttaaattggatgaaatttaataaataaaggcataatagt 15818608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 113
Target Start/End: Complemental strand, 39325903 - 39325862
Alignment:
Q  73 tagttagtggagtagtta-gttggatgaaattcaataaataa 113  Q
    |||||||||||||||||| ||||||| |||||||||||||||    
T  39325903 tagttagtggagtagttaagttggattaaattcaataaataa 39325862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 122
Target Start/End: Original strand, 30512757 - 30512809
Alignment:
Q  71 tgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataat 122  Q
    ||||||||||| | |||||| ||||||||||||| ||||||||||| ||||||    
T  30512757 tgtagttagtgaaatagttaagttggatgaaatttaataaataaggatataat 30512809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 122
Target Start/End: Original strand, 30553097 - 30553149
Alignment:
Q  71 tgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataat 122  Q
    ||||||||||| | |||||| ||||||||||||| ||||||||||| ||||||    
T  30553097 tgtagttagtgaaatagttaagttggatgaaatttaataaataaggatataat 30553149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 38508154 - 38508206
Alignment:
Q  21 aaataatagtcgtctaagatttgtgtacgatttttacgaaagtaattaattgt 73  Q
    ||||||||||||| |||||||||||  ||||||||| |||| | |||||||||    
T  38508154 aaataatagtcgtttaagatttgtgctcgatttttaagaaaatgattaattgt 38508206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 41478973 - 41478921
Alignment:
Q  21 aaataatagtcgtctaagatttgtgtacgatttttacgaaagtaattaattgt 73  Q
    |||||||||||||||||| ||||||  ||||||||| |||| | |||||||||    
T  41478973 aaataatagtcgtctaaggtttgtgcgcgatttttaagaaaatgattaattgt 41478921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 41492448 - 41492396
Alignment:
Q  21 aaataatagtcgtctaagatttgtgtacgatttttacgaaagtaattaattgt 73  Q
    |||||||||||||||||| ||||||  ||||||||| |||| | |||||||||    
T  41492448 aaataatagtcgtctaaggtttgtgcgcgatttttaagaaaatgattaattgt 41492396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 2e-19; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 12904912 - 12904851
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  12904912 attaattgtagttagtggagtaattaagttggatgaaattcaataaataagggtataatagt 12904851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 10366716 - 10366775
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  10366716 attaattgtagttagtgaagtagttaagttggatgaaattcaataaataagggtataata 10366775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 37695733 - 37695792
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  37695733 attaattgtagttagtggagtagttaagttagatgaaattcaataaataagggtataata 37695792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 39043824 - 39043883
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  39043824 attaattgtagttagtggagtagttaagttgaatgaaattcaataaataagggtataata 39043883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 36460483 - 36460544
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    |||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||    
T  36460483 attaattgtagttaatggagtaattaagttggatgaaattcaataaataagggtataatagt 36460544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 43253930 - 43253991
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    |||||||||||||||||||||||||| || |||||||||||| |||||||||||||||||||    
T  43253930 attaattgtagttagtggagtagttaagtgggatgaaattcattaaataagggtataatagt 43253991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 65 - 120
Target Start/End: Complemental strand, 19823059 - 19823003
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtata 120  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  19823059 attaattgtagttagtggaatagttaagttggatgaaattcaataaataagggtata 19823003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 69 - 123
Target Start/End: Complemental strand, 1778687 - 1778632
Alignment:
Q  69 attgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  1778687 attgtagttagtggagtagataagttggatgaaattcaataaataagggtataata 1778632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 29024032 - 29024091
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||    
T  29024032 attaattgtagttagtggagtaattaagttggatgaaattcaataaataatggtataata 29024091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 30190727 - 30190786
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataagggtataata 123  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||    
T  30190727 attaattgtagttagtggagtagttaagttggatgaaattcaattaataagggtaaaata 30190786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 36476632 - 36476573
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||    
T  36476632 attaattgtagttagtagagtagttaagtttgatgaaattcaataaataagggtataata 36476573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 68 - 125
Target Start/End: Complemental strand, 44301607 - 44301549
Alignment:
Q  68 aattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  44301607 aattgtaattagtggagtagttaagttggatgaaattcaataaataagagtataatagt 44301549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 23004449 - 23004502
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataagggt 117  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  23004449 attaattgtagttagtggagtagttaagttgtatgaaattcaataaataagggt 23004502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 65 - 117
Target Start/End: Complemental strand, 45710898 - 45710845
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataagggt 117  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  45710898 attaattgtagttagtggagtagttaagttggatgaagttcaataaataagggt 45710845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 3901216 - 3901275
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||| ||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||    
T  3901216 attagttgtagttagtggggtacttaagttggatgaaattcaataaataagggtataata 3901275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 17652800 - 17652741
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||||||||||||||||  ||||||| ||||||||||||| |||||||||||||||||||    
T  17652800 attaattgtagttagtgaggtagttaagttggatgaaatttaataaataagggtataata 17652741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 66 - 123
Target Start/End: Complemental strand, 37497539 - 37497481
Alignment:
Q  66 ttaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||  ||||||||    
T  37497539 ttaactgtagttagtggagtagttaagttggatgaaattcaataaataaacgtataata 37497481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 8679121 - 8679182
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    ||||||| ||||||||| | || ||| |||||||||||||||||||||||||||||||||||    
T  8679121 attaattatagttagtgaattaattaagttggatgaaattcaataaataagggtataatagt 8679182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 11632129 - 11632068
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    |||||||||||||||||||  ||||| |||||||||||||||||||||||  ||||||||||    
T  11632129 attaattgtagttagtggaaaagttaagttggatgaaattcaataaataaaagtataatagt 11632068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 12736639 - 12736700
Alignment:
Q  65 attaattgtagttagtggagtagttagtt-ggatgaaattcaataaataagggtataatagt 125  Q
    |||||||||| |||||| |||||||| || |||| |||||||||||||||||||||||||||    
T  12736639 attaattgtacttagtgtagtagttaatttggataaaattcaataaataagggtataatagt 12736700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 51838026 - 51838087
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    |||| |||||| |||||||||||||| |||| |||||||||| |||||||||||||||||||    
T  51838026 attagttgtagctagtggagtagttacgttgaatgaaattcattaaataagggtataatagt 51838087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 3313302 - 3313243
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||||||||||||| ||||||| ||| ||||||||||||||||||||||||  |||||||    
T  3313302 attaattgtagttaatggagtatttaagttggatgaaattcaataaataagattataata 3313243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 11905870 - 11905811
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||||||||||||| |||||| |||| ||||||||||||||||||||||| | |||||||    
T  11905870 attaattgtagttaatggagttgttaagttggatgaaattcaataaataaagatataata 11905811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 127
Target Start/End: Complemental strand, 34750544 - 34750481
Alignment:
Q  65 attaattgtagttagtggagtagttag-ttggatgaaattcaataaataagggtataatagtaa 127  Q
    ||||||||||||| ||||||||||||  |||||||||| | ||||||||| |||||||||||||    
T  34750544 attaattgtagttggtggagtagttaacttggatgaaaattaataaataatggtataatagtaa 34750481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 37311998 - 37311939
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataagggtataata 123  Q
    ||||||||||||||||||||||||| | ||  ||||||||||||||||||| ||||||||    
T  37311998 attaattgtagttagtggagtagttaaatttaatgaaattcaataaataagagtataata 37311939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 126
Target Start/End: Complemental strand, 19611957 - 19611895
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataagggtataatagta 126  Q
    ||||||||| ||||||||||||||| |||| |||||||||||||||||||  |||| ||||||    
T  19611957 attaattgttgttagtggagtagttaagtttgatgaaattcaataaataaatgtattatagta 19611895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 24569167 - 24569225
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaat-aagggtataa 121  Q
    ||||||||||||||||||||||||| ||||| |||||||||| ||||| ||||||||||    
T  24569167 attaattgtagttagtggagtagttaagttgaatgaaattcattaaatgaagggtataa 24569225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 33491426 - 33491488
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaa-ttcaataaataagggtataatagt 125  Q
    ||||||| ||||||||||||||||| ||||| |||||| || |||||||||||||||||||||    
T  33491426 attaattatagttagtggagtagttaagttgtatgaaattttaataaataagggtataatagt 33491488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 126
Target Start/End: Original strand, 49447858 - 49447920
Alignment:
Q  65 attaattgtagttagtggagtagttag-ttggatgaaattcaataaataagggtataatagta 126  Q
    |||||||||||||||| || ||||||  || ||||||||| ||||||||||||||||||||||    
T  49447858 attaattgtagttagtagaatagttaaatttgatgaaatttaataaataagggtataatagta 49447920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 38795392 - 38795331
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    ||||||||||||| ||||||| |||| ||||||||||||| |||||| ||||| ||||||||    
T  38795392 attaattgtagttggtggagttgttaagttggatgaaatttaataaaaaagggcataatagt 38795331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 40194551 - 40194490
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataagggtataatagt 125  Q
    |||||||||||||||||| |||||| ||||||| |||||| ||||||||| | |||||||||    
T  40194551 attaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagt 40194490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 73 - 121
Target Start/End: Original strand, 41351639 - 41351688
Alignment:
Q  73 tagttagtggagtagtta-gttggatgaaattcaataaataagggtataa 121  Q
    |||||||||||||||||| |||| |||||||||||||||||| |||||||    
T  41351639 tagttagtggagtagttaagttgaatgaaattcaataaataaaggtataa 41351688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 120
Target Start/End: Complemental strand, 34957551 - 34957495
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataagggtata 120  Q
    ||||||| ||||||||||||||||| ||||  |||||||||||||||||||| ||||    
T  34957551 attaattatagttagtggagtagttcagttaaatgaaattcaataaataaggatata 34957495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 5323004 - 5323063
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    ||||||| || |||||  |||||||| ||| |||||||||||||||||||||||||||||    
T  5323004 attaattataattagtaaagtagttaagtttgatgaaattcaataaataagggtataata 5323063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 37773031 - 37773090
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    ||||||| |||| |||||| |||||| |||| |||||||||| |||||||||||||||||    
T  37773031 attaattatagtcagtggaatagttaagttgaatgaaattcattaaataagggtataata 37773090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 119
Target Start/End: Complemental strand, 38705223 - 38705168
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtat 119  Q
    |||||||||||||||| ||||| ||| ||| |||||||||||||||||||| ||||    
T  38705223 attaattgtagttagttgagtaattaagttagatgaaattcaataaataagagtat 38705168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 119
Target Start/End: Complemental strand, 54726533 - 54726478
Alignment:
Q  65 attaattgtagttagtggagtagtt-agttggatgaaattcaataaataagggtat 119  Q
    |||||||||||||| |||||||||| |||| |||||| || |||||||||||||||    
T  54726533 attaattgtagttaatggagtagttaagttagatgaagtttaataaataagggtat 54726478  T

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Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 122
Target Start/End: Original strand, 28690849 - 28690907
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataat 122  Q
    |||||||||||||||||   |||||| |||||||||||||||||||||||  |||||||    
T  28690849 attaattgtagttagtgagatagttaagttggatgaaattcaataaataaatgtataat 28690907  T

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Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 119
Target Start/End: Original strand, 54225903 - 54225957
Alignment:
Q  65 attaattgtagttagtggagtagttagttggatgaaattcaataaataagggtat 119  Q
    ||||||| ||||||||||||| ||||| ||  |||||| ||||||||||||||||    
T  54225903 attaattatagttagtggagtggttagatgattgaaatgcaataaataagggtat 54225957  T

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Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 14194594 - 14194545
Alignment:
Q  75 gttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||||||||||| ||| ||||||||||||||||| ||||| |||||||||    
T  14194594 gttagtggagtaattaagttggatgaaattcaattaataaaggtataata 14194545  T

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Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 30711121 - 30711060
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    |||||||||||||| ||||| | ||| ||| ||||||||||||||||||||  |||||||||    
T  30711121 attaattgtagttaatggagcaattaagttagatgaaattcaataaataagattataatagt 30711060  T

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Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 38137513 - 38137574
Alignment:
Q  65 attaattgtagttagtggagtagttag-ttggatgaaattcaataaataagggtataatagt 125  Q
    ||||| |||||||||||| |||||||  || ||||||||||||||||||| | |||||||||    
T  38137513 attaactgtagttagtggggtagttaaattcgatgaaattcaataaataaagatataatagt 38137574  T

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Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 125
Target Start/End: Complemental strand, 40462366 - 40462306
Alignment:
Q  66 ttaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    ||||||||||||||  ||||||||| ||||||| ||||||||||||||   ||||||||||    
T  40462366 ttaattgtagttagaagagtagttaagttggataaaattcaataaatagttgtataatagt 40462306  T

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Target: scaffold0110 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 1752 - 1693
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||    
T  1752 attaattgtagtcagtggagtagttaagttggattaaattcaataaataagggtataata 1693  T

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Target: scaffold0159 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 34086 - 34147
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    ||||||||||||||||| | |||||| ||||||||||||||||||||||| |||||||||||    
T  34086 attaattgtagttagtgaaatagttaagttggatgaaattcaataaataatggtataatagt 34147  T

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Target: scaffold0330 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 65 - 120
Target Start/End: Complemental strand, 5438 - 5382
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtata 120  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  5438 attaattttagttagtggagtagttaagttggatgaaattcaataaataaaggtata 5382  T

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Target: scaffold0328 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 119
Target Start/End: Original strand, 8048 - 8103
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtat 119  Q
    |||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||    
T  8048 attaattgtagttagtggagtaattaagttggatgaagttcaataaataagggtat 8103  T

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Target: scaffold0182 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 20420 - 20479
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||||||| |||||||| |||||||| ||||||||||||||||||||| |||||||||||    
T  20420 attaattgcagttagtgaagtagttaagttggatgaaattcaataaatgagggtataata 20479  T

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Target: scaffold0012 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 105732 - 105673
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    ||||||||||||||||| |||||||| |||| ||||||||| ||||||||||||||||||    
T  105732 attaattgtagttagtgaagtagttaagttgaatgaaattcgataaataagggtataata 105673  T

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Target: scaffold1809 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 69 - 125
Target Start/End: Original strand, 755 - 812
Alignment:
Q  69 attgtagttagtggagtagttag-ttggatgaaattcaataaataagggtataatagt 125  Q
    |||||||||||||||||  |||  ||||||||||||||||||||||||||||||||||    
T  755 attgtagttagtggagtgtttaaattggatgaaattcaataaataagggtataatagt 812  T

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Target: scaffold0016 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 77 - 125
Target Start/End: Complemental strand, 76328 - 76279
Alignment:
Q  77 tagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  76328 tagtggagtagttaagttagatgaaattcaataaataagggtataatagt 76279  T

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Target: scaffold0583 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0583
Description:

Target: scaffold0583; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 2073 - 2014
Alignment:
Q  65 attaattgtagttagtggagtagttag-ttggatgaaattcaataaataagggtataata 123  Q
    ||||||||||||||||||| || |||  || |||||||||||||||||||||||||||||    
T  2073 attaattgtagttagtggattaattacattcgatgaaattcaataaataagggtataata 2014  T

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Target: scaffold0018 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 126
Target Start/End: Original strand, 136104 - 136166
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagta 126  Q
    ||||||| ||||||||| |||||||| ||| ||||||||| ||||||||| ||||||||||||    
T  136104 attaattatagttagtgaagtagttaagtttgatgaaattaaataaataatggtataatagta 136166  T

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Target: scaffold0095 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 50252 - 50191
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 125  Q
    |||||||  ||||||||||||| ||| |||| |||||||| |||||||||||||||||||||    
T  50252 attaattacagttagtggagtaattaagttgaatgaaattaaataaataagggtataatagt 50191  T

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Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 14235 - 14296
Alignment:
Q  65 attaattgtagttagtggagtagttag-ttggatgaaattcaataaataagggtataatagt 125  Q
    ||||||| |||||| |||||||||||  || ||||||||||||||||||| |||||||||||    
T  14235 attaattatagttaatggagtagttaaatttgatgaaattcaataaataaaggtataatagt 14296  T

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Target: scaffold0003 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 252872 - 252930
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||||||||||| | ||||||||||| |||| ||||||||||||||||||| ||||||||    
T  252872 attaattgtagt-attggagtagttaagttgaatgaaattcaataaataagagtataata 252930  T

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Target: scaffold0302 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 16146 - 16089
Alignment:
Q  65 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataa 121  Q
    |||||||||||||| || || ||||| | ||||||||||||||||||||||| |||||    
T  16146 attaattgtagttaatgaagcagttaagatggatgaaattcaataaataaggatataa 16089  T

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Target: scaffold0001 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 123
Target Start/End: Complemental strand, 143880 - 143839
Alignment:
Q  83 agtagtta-gttggatgaaattcaataaataagggtataata 123  Q
    |||||||| ||||||||||||| |||||||||||||||||||    
T  143880 agtagttatgttggatgaaattaaataaataagggtataata 143839  T

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