View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16535_low_20 (Length: 347)
Name: NF16535_low_20
Description: NF16535
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16535_low_20 |
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Alignment Details
Target: chr7 (Bit Score: 321; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 11 - 331
Target Start/End: Original strand, 48451741 - 48452061
Alignment:
| Q |
11 |
atgagatgacatcgcctccgcatcctttactcccttcagaaagtgccttctatgagcttgatagtactatatgtggatactctccaagagttctcagttc |
110 |
Q |
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| T |
48451741 |
atgagatgacatcgcctccgcatcctttactcccttcagaaagtgccttctatgagcttgatagtactatatgtggatactctccaagagttctcagttc |
48451840 |
T |
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| Q |
111 |
ctttctcaatcaaccacaccctattgaaacactaagtgatccaacagcatatggagcagaaggcacaattctaagagaccatgactcaagcaactacctt |
210 |
Q |
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| T |
48451841 |
ctttctcaatcaaccacaccctattgaaacactaagtgatccaacagcatatggagcagaaggcacaattctaagagaccatgactcaagcaactacctt |
48451940 |
T |
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| Q |
211 |
aaagctgtcaatggaatcctaagacaacattcaaagacgcttgttcgcagagtaaaaaagcaaaggattgatgaactgtggccattgctcacctcaccat |
310 |
Q |
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| T |
48451941 |
aaagctgtcaatggaatcctaagacaacattcaaagacgcttgttcgcagagtaaaaaagcaaaggattgatgaactgtggccattgctcacctcaccat |
48452040 |
T |
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| Q |
311 |
caccacactcatggagccatg |
331 |
Q |
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| T |
48452041 |
caccacactcatggagccatg |
48452061 |
T |
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