View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16537_high_5 (Length: 336)
Name: NF16537_high_5
Description: NF16537
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16537_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 311; Significance: 1e-175; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 1 - 323
Target Start/End: Complemental strand, 30516396 - 30516074
Alignment:
| Q |
1 |
aaaatgacataattcaatgtaatcgcatctgaaaccatcggcgtcagacatatcttccacccgaagtgtgggtgtttacgagtgatcacaacatactatt |
100 |
Q |
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| T |
30516396 |
aaaatgatataattcaatgtaatcgcatctgaaaccatcggtgtcagacatatcttccacccgaagtgtgggtgtttacgagtgatcacaacatactatt |
30516297 |
T |
|
| Q |
101 |
ttacaaaaatgaaatacgagttaatgaaatgtagtgtaagtgtaagatacctcataattagtgataacaccattgtgaacaaccatgaactcattagcag |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
30516296 |
ttacaaaaatgaaatacgagttaatgaaatgtagtgtaagtgtaagatacctcataattagtgatcacaccattgtgaacaaccatgaactcattagcag |
30516197 |
T |
|
| Q |
201 |
gacctgaagtttgtggatgactattcctgggagcaggctcaccatgtgtagcccaacgcgtatgcgcaattccagcatgagtgccgaaactttcctccaa |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30516196 |
gacctgaagtttgtggatgactattcctgggagcaggctcaccatgtgtagcccaacgcgtatgcgcaattccagcatgagtgccgaaactttcctccaa |
30516097 |
T |
|
| Q |
301 |
gttcaattcaatttcaccaacct |
323 |
Q |
| |
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||||||||||||||||||||||| |
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| T |
30516096 |
gttcaattcaatttcaccaacct |
30516074 |
T |
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