View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16537_low_9 (Length: 324)
Name: NF16537_low_9
Description: NF16537
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16537_low_9 |
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Alignment Details
Target: chr8 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 11 - 309
Target Start/End: Original strand, 41066361 - 41066655
Alignment:
| Q |
11 |
gatgaatgaaaaccatattaagtacgccgctatagcggttaagatcattaaagcatttgatgcatccatgtgctttgtgggacccaataactgaaataca |
110 |
Q |
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| T |
41066361 |
gatgaatgaaaaccatattaaatacgccgctatagcggttaagatcattaaagcatttgatgcatccatgtgctttgtgggacccaataaccgaaataca |
41066460 |
T |
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| Q |
111 |
gct---ttattattagttggaagtacttctaatataacaccgtgaaagtttcacggtggaaacaacgttaatgtcgtaggttttgatcgacaaacaataa |
207 |
Q |
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| T |
41066461 |
gctttattattattagttggaagtacttc-----taacacagtgaaagtttcacggtggaaacaaggt---tgtcgtaggttttgatcgacaaacaataa |
41066552 |
T |
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| Q |
208 |
ttgacgttcaagtttgaatgcatgtacgtaaatttctggttt-aggtgggaggagattggtttatcaaatggtgttaaaatatagtttaaatgtgtaatg |
306 |
Q |
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| T |
41066553 |
ttgacgttcaagtttgaatgcatgtacgtaaatttctggtttaaggtgggaggagattggtttatcaaatggtgttaaaatatagtttaaatgtgtaatg |
41066652 |
T |
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