View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16541_low_14 (Length: 215)

Name: NF16541_low_14
Description: NF16541
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16541_low_14
NF16541_low_14
[»] scaffold0189 (1 HSPs)
scaffold0189 (13-76)||(28957-29020)
[»] chr7 (33 HSPs)
chr7 (17-76)||(25098076-25098135)
chr7 (13-76)||(9946995-9947058)
chr7 (13-76)||(33378845-33378908)
chr7 (13-76)||(35488194-35488257)
chr7 (13-76)||(40212892-40212955)
chr7 (13-76)||(45265053-45265116)
chr7 (13-76)||(45448945-45449008)
chr7 (13-76)||(48314125-48314188)
chr7 (13-76)||(48341365-48341428)
chr7 (13-76)||(8419594-8419657)
chr7 (13-76)||(11329996-11330059)
chr7 (13-76)||(25924642-25924705)
chr7 (13-76)||(27213860-27213923)
chr7 (13-76)||(27248296-27248359)
chr7 (13-76)||(38544197-38544260)
chr7 (13-76)||(39554186-39554249)
chr7 (13-76)||(43949248-43949311)
chr7 (13-76)||(44566048-44566111)
chr7 (13-76)||(45045629-45045692)
chr7 (13-76)||(48160596-48160659)
chr7 (19-76)||(9814223-9814280)
chr7 (13-76)||(27419229-27419292)
chr7 (13-76)||(38396371-38396434)
chr7 (22-76)||(44820266-44820320)
chr7 (13-76)||(41632369-41632432)
chr7 (14-76)||(45723211-45723273)
chr7 (13-76)||(34930470-34930534)
chr7 (13-76)||(6656229-6656292)
chr7 (13-76)||(16825359-16825422)
chr7 (13-76)||(28904191-28904254)
chr7 (13-76)||(18824148-18824212)
chr7 (13-76)||(6656478-6656540)
chr7 (15-76)||(31921753-31921813)
[»] chr8 (22 HSPs)
chr8 (13-78)||(18298115-18298180)
chr8 (13-76)||(16313512-16313575)
chr8 (13-76)||(18726624-18726687)
chr8 (13-75)||(3050012-3050074)
chr8 (13-74)||(37392553-37392614)
chr8 (13-76)||(1554359-1554422)
chr8 (13-76)||(12710648-12710711)
chr8 (13-76)||(25837914-25837977)
chr8 (13-76)||(26062147-26062210)
chr8 (13-76)||(26601943-26602006)
chr8 (13-76)||(32660938-32661001)
chr8 (13-76)||(35818429-35818492)
chr8 (13-76)||(38132742-38132805)
chr8 (13-76)||(38364084-38364147)
chr8 (13-76)||(10896222-10896285)
chr8 (13-76)||(42755870-42755933)
chr8 (15-76)||(41228719-41228780)
chr8 (13-76)||(7317376-7317439)
chr8 (19-76)||(7931248-7931305)
chr8 (19-76)||(40197081-40197138)
chr8 (13-78)||(35394393-35394458)
chr8 (28-76)||(5020495-5020543)
[»] chr5 (17 HSPs)
chr5 (13-76)||(27481360-27481423)
chr5 (13-76)||(4765565-4765628)
chr5 (13-76)||(12970535-12970598)
chr5 (13-76)||(14206826-14206889)
chr5 (13-76)||(19065510-19065573)
chr5 (14-75)||(8406898-8406959)
chr5 (13-76)||(18412212-18412275)
chr5 (13-76)||(22935917-22935980)
chr5 (13-76)||(28602558-28602621)
chr5 (13-76)||(36703877-36703940)
chr5 (13-76)||(555711-555774)
chr5 (13-76)||(6091718-6091781)
chr5 (13-76)||(11855660-11855723)
chr5 (13-76)||(29543020-29543083)
chr5 (19-76)||(32535946-32536003)
chr5 (13-60)||(8646412-8646459)
chr5 (13-70)||(27481012-27481069)
[»] chr4 (34 HSPs)
chr4 (13-76)||(48518896-48518959)
chr4 (13-75)||(45596275-45596337)
chr4 (13-76)||(27555417-27555480)
chr4 (13-76)||(35999693-35999756)
chr4 (13-76)||(39730298-39730361)
chr4 (13-76)||(41859052-41859115)
chr4 (13-76)||(45747801-45747864)
chr4 (13-76)||(13229994-13230057)
chr4 (13-76)||(18931760-18931823)
chr4 (13-76)||(27762904-27762967)
chr4 (13-76)||(40435907-40435970)
chr4 (13-76)||(41744225-41744288)
chr4 (13-76)||(42773955-42774018)
chr4 (13-76)||(48879332-48879395)
chr4 (22-76)||(25916040-25916094)
chr4 (13-76)||(6279926-6279989)
chr4 (13-76)||(10400810-10400873)
chr4 (13-76)||(23686794-23686857)
chr4 (13-76)||(27942750-27942813)
chr4 (13-76)||(34049602-34049665)
chr4 (19-76)||(55968005-55968062)
chr4 (13-76)||(18405239-18405302)
chr4 (13-76)||(25932448-25932511)
chr4 (21-76)||(34237425-34237480)
chr4 (13-76)||(39835312-39835375)
chr4 (13-76)||(43723271-43723334)
chr4 (13-76)||(47670369-47670432)
chr4 (14-76)||(32953531-32953593)
chr4 (19-76)||(39498838-39498895)
chr4 (19-76)||(39502177-39502234)
chr4 (13-76)||(936133-936196)
chr4 (13-69)||(8322252-8322308)
chr4 (19-76)||(30415915-30415972)
chr4 (13-46)||(50672940-50672973)
[»] chr3 (22 HSPs)
chr3 (13-76)||(28124441-28124504)
chr3 (13-76)||(33217918-33217981)
chr3 (13-76)||(24574578-24574641)
chr3 (13-76)||(26849025-26849088)
chr3 (13-76)||(40908268-40908331)
chr3 (13-76)||(6231506-6231569)
chr3 (13-76)||(11239125-11239188)
chr3 (13-76)||(20414470-20414533)
chr3 (13-76)||(44952311-44952374)
chr3 (13-76)||(48339762-48339825)
chr3 (16-76)||(8476313-8476373)
chr3 (20-76)||(9320453-9320509)
chr3 (13-76)||(20297796-20297859)
chr3 (13-76)||(47114862-47114925)
chr3 (13-76)||(1099201-1099264)
chr3 (13-76)||(43132162-43132225)
chr3 (13-76)||(31435928-31435991)
chr3 (19-76)||(43715313-43715370)
chr3 (15-54)||(9320407-9320446)
chr3 (13-66)||(10822733-10822786)
chr3 (35-76)||(29512704-29512745)
chr3 (13-62)||(31611004-31611053)
[»] chr2 (32 HSPs)
chr2 (13-76)||(11071608-11071671)
chr2 (13-76)||(346350-346413)
chr2 (13-76)||(37533955-37534018)
chr2 (13-76)||(39995136-39995199)
chr2 (13-76)||(638596-638659)
chr2 (13-76)||(5770115-5770178)
chr2 (13-76)||(6171794-6171857)
chr2 (13-76)||(9733851-9733914)
chr2 (13-76)||(13760948-13761011)
chr2 (13-76)||(21737405-21737468)
chr2 (13-76)||(41729135-41729198)
chr2 (13-76)||(42674666-42674729)
chr2 (13-76)||(2050869-2050932)
chr2 (13-76)||(14777503-14777566)
chr2 (13-76)||(28311702-28311765)
chr2 (13-76)||(34356705-34356768)
chr2 (13-76)||(37192525-37192588)
chr2 (13-76)||(40950864-40950927)
chr2 (13-76)||(2521678-2521741)
chr2 (13-76)||(4559562-4559625)
chr2 (13-76)||(20426488-20426551)
chr2 (14-77)||(26310273-26310336)
chr2 (13-76)||(37233432-37233495)
chr2 (13-76)||(41750532-41750595)
chr2 (13-74)||(6571690-6571751)
chr2 (13-76)||(17965986-17966049)
chr2 (13-76)||(45409253-45409316)
chr2 (13-70)||(11763382-11763439)
chr2 (13-76)||(1988314-1988377)
chr2 (13-76)||(14832813-14832876)
chr2 (13-76)||(27357968-27358031)
chr2 (13-66)||(14253525-14253578)
[»] chr1 (33 HSPs)
chr1 (13-76)||(1597347-1597410)
chr1 (13-76)||(12190182-12190245)
chr1 (13-76)||(2430500-2430563)
chr1 (13-76)||(3572570-3572633)
chr1 (13-76)||(6911497-6911560)
chr1 (13-76)||(8332018-8332081)
chr1 (13-76)||(36361786-36361849)
chr1 (13-76)||(49822922-49822985)
chr1 (13-76)||(2632856-2632919)
chr1 (13-76)||(6978774-6978837)
chr1 (13-76)||(9115841-9115904)
chr1 (13-76)||(14788727-14788790)
chr1 (13-76)||(25789767-25789830)
chr1 (13-76)||(32824926-32824989)
chr1 (13-76)||(39930461-39930524)
chr1 (13-76)||(46666712-46666775)
chr1 (16-76)||(5806296-5806356)
chr1 (13-76)||(9831875-9831938)
chr1 (13-76)||(20260091-20260154)
chr1 (13-76)||(38964684-38964747)
chr1 (13-76)||(39329612-39329675)
chr1 (13-76)||(47037461-47037524)
chr1 (13-76)||(52630777-52630840)
chr1 (13-76)||(51445085-51445148)
chr1 (13-75)||(30241013-30241075)
chr1 (13-74)||(4683381-4683442)
chr1 (19-76)||(35187466-35187523)
chr1 (15-76)||(50190770-50190831)
chr1 (13-76)||(5518509-5518572)
chr1 (18-76)||(32202336-32202394)
chr1 (13-72)||(37436630-37436689)
chr1 (13-76)||(48916027-48916090)
chr1 (19-76)||(1007757-1007814)
[»] scaffold0006 (1 HSPs)
scaffold0006 (13-76)||(201928-201991)
[»] chr6 (8 HSPs)
chr6 (13-76)||(7053575-7053638)
chr6 (13-76)||(14171016-14171079)
chr6 (13-76)||(1317021-1317084)
chr6 (13-76)||(2657703-2657766)
chr6 (13-76)||(8029336-8029399)
chr6 (13-76)||(18897924-18897987)
chr6 (14-76)||(7344088-7344150)
chr6 (13-74)||(16968928-16968989)


Alignment Details
Target: scaffold0189 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 29020 - 28957
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  29020 cataggcatatacattcctatcattttattcccgaaaatcaacaattataacttgaaacaaaca 28957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 9e-26; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 25098076 - 25098135
Alignment:
Q  17 ggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25098076 ggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 25098135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 9947058 - 9946995
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||    
T  9947058 cataggcatatacattcctatcattttattcccgggaatcaaaaattataactttaaacaaaca 9946995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 33378845 - 33378908
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||    
T  33378845 cataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaaca 33378908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 35488257 - 35488194
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||    
T  35488257 cataggcatatacattccaatcattttattcccggaaatcaacaattataacttgaaacaaaca 35488194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 40212892 - 40212955
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||    
T  40212892 cataggcatatacattcctatcattttattcccgcgaatcaacaattataacttgaaacaaaca 40212955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 45265116 - 45265053
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||    
T  45265116 cataggcatatacattccaatcattttattcccgagaatcaacaattataacttgaaacaaaca 45265053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 45448945 - 45449008
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  45448945 catagacatctacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaaca 45449008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 48314125 - 48314188
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||    
T  48314125 cataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaaca 48314188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 48341365 - 48341428
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||    
T  48341365 cataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaaca 48341428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 8419657 - 8419594
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||||| |||||||||||||||  |||||| |||||||||||||||||||||    
T  8419657 cataggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaaca 8419594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 11329996 - 11330059
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||| |||||||||||||||||  |||||| |||||||||||||||||||||    
T  11329996 cataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaaca 11330059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 25924705 - 25924642
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||| |||||||||||||||||  |||||| |||||||||||||||||||||    
T  25924705 cataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaaca 25924642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 27213923 - 27213860
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||| |||||||||||||||||  |||||| |||||||||||||||||||||    
T  27213923 cataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaaca 27213860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 27248296 - 27248359
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||||| |||||||||||||||  |||||| |||||||||||||||||||||    
T  27248296 cataggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaaca 27248359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 38544197 - 38544260
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||||||||||||||||| |||  |||||| |||||||||||||||||||||    
T  38544197 cataggcatatacattcctatcattttatttccgggaatcaacaattataacttgaaacaaaca 38544260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 39554186 - 39554249
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||| |||||||||||||||||  |||||| |||||||||||||||||||||    
T  39554186 cataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaaca 39554249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 43949248 - 43949311
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||| |||||||||||||||||  |||||| |||||||||||||||||||||    
T  43949248 cataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaaca 43949311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 44566048 - 44566111
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||| |||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  44566048 catagacatatacattcctatcattttatttccggaaatcaacaattataacttgaaacaaaca 44566111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 45045629 - 45045692
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||||||||||||||||||||||||||||||||  |||||| ||||||||||| |||||||||    
T  45045629 cataggcatatacattcctatcattttattcccgggaatcaacaattataacttaaaacaaaca 45045692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 48160659 - 48160596
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||| ||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||    
T  48160659 catagacatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaaca 48160596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 9814280 - 9814223
Alignment:
Q  19 catatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||    
T  9814280 catatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaaca 9814223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 27419292 - 27419229
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||| |||||||||||||||||  |||||  |||||||||||||||||||||    
T  27419292 cataggcatatacatttctatcattttattcccgggaatcagcaattataacttgaaacaaaca 27419229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 38396434 - 38396371
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||| ||||||||||||||||||||||||||||  |||||| |||||||||||| ||||||||    
T  38396434 catagacatatacattcctatcattttattcccgggaatcaacaattataacttggaacaaaca 38396371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 44820266 - 44820320
Alignment:
Q  22 atacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||    
T  44820266 atacatttctatcattttattcctgaaaatcaacaattataacttgaaacaaaca 44820320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 41632432 - 41632369
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||| |||||||||||||| |   |||||| |||||||||||||||||||||    
T  41632432 cataggcatatacatttctatcattttattctcaggaatcaacaattataacttgaaacaaaca 41632369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 76
Target Start/End: Original strand, 45723211 - 45723273
Alignment:
Q  14 ataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||||||||| |||||||||||||||||| ||  |||||| || ||||||||||||||||||    
T  45723211 ataggcatatatattcctatcattttattctcgggaatcaacaaatataacttgaaacaaaca 45723273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 34930534 - 34930470
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataac-ttgaaacaaaca 76  Q
    |||||||||||||||| ||||||||||||||||   |||||| ||||||||| ||||||||||||    
T  34930534 cataggcatatacatttctatcattttattcccaggaatcaacaattataactttgaaacaaaca 34930470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 6656292 - 6656229
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||| ||||| |||| |||||||||||| || |||||||| || ||||||||||||||||||    
T  6656292 cataggtatatatattcatatcattttatttccaaaaatcaacaaatataacttgaaacaaaca 6656229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 16825422 - 16825359
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||| |||||||||||||||    ||| || |||||||||||||||||||||    
T  16825422 cataggcatatacatttctatcattttattcctaggaattaacaattataacttgaaacaaaca 16825359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 28904254 - 28904191
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||| |||||||||| |||||||||||||| ||  |||||| ||||||||||| |||||||||    
T  28904254 catagacatatacatttctatcattttattctcgggaatcaacaattataacttaaaacaaaca 28904191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 18824148 - 18824212
Alignment:
Q  13 cataggcatatacattc-ctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||| |||  |||||||||||||||| |||||||| || || |||||||||||||||    
T  18824148 cataggcatatatattttctatcattttattcccaaaaatcaacaaatacaacttgaaacaaaca 18824212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 6656540 - 6656478
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||| |||| |||||||| ||| || |||||||| || ||||||||||||||||||    
T  6656540 cataggcatatatattcatatcattt-atttccaaaaatcaacaaatataacttgaaacaaaca 6656478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 31921813 - 31921753
Alignment:
Q  15 taggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||| ||| ||||||||||||| ||| |||| || || ||||||||||||||||||    
T  31921813 taggcatatatatttctatcattttatttccg-aaatgaacaaatataacttgaaacaaaca 31921753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 1e-24; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 18298115 - 18298180
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaacaaa 78  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18298115 cataggtatatacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaacaaa 18298180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 16313575 - 16313512
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  16313575 cataggtatatacattcctatcattttattcccggaaatcaacaattataacttgaaacaaaca 16313512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 18726687 - 18726624
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||    
T  18726687 cataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaaca 18726624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 75
Target Start/End: Original strand, 3050012 - 3050074
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaac 75  Q
    ||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||    
T  3050012 cataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaac 3050074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 37392614 - 37392553
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaa 74  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||    
T  37392614 cataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaa 37392553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 1554422 - 1554359
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||| ||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||    
T  1554422 catagacatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaaca 1554359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 12710648 - 12710711
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||| |||||||||||||||||  |||||| |||||||||||||||||||||    
T  12710648 cataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaaca 12710711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 25837914 - 25837977
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||||||| ||||||||||||||||||||||||  |||||| |||||||||||||||||||||    
T  25837914 cataggcatgtacattcctatcattttattcccgggaatcaacaattataacttgaaacaaaca 25837977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 26062147 - 26062210
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||| ||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||    
T  26062147 cataggaatatacatttctatcattttattcccgagaatcaacaattataacttgaaacaaaca 26062210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 26602006 - 26601943
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||| ||||||||||||    
T  26602006 cataggcatatacattcctatcattttattcccgggaatcaacaattataatttgaaacaaaca 26601943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 32661001 - 32660938
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||||||||||||||||||||   |||||| |||||||||||||||||||||    
T  32661001 cataggcatatacattcctatcattttattcccaggaatcaacaattataacttgaaacaaaca 32660938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 35818492 - 35818429
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||||| |||||||||||||||  |||||| |||||||||||||||||||||    
T  35818492 cataggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaaca 35818429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 38132805 - 38132742
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||| |||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||    
T  38132805 catagacatatacatttctatcattttattcccgagaatcaacaattataacttgaaacaaaca 38132742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 38364084 - 38364147
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||||| |||||||||||||||  |||||| |||||||||||||||||||||    
T  38364084 cataggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaaca 38364147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 10896285 - 10896222
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||| ||||||||||||||| |  |||||| |||||||||||||||||||||    
T  10896285 cataggcatatacatttctatcattttattcctgggaatcaacaattataacttgaaacaaaca 10896222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 42755870 - 42755933
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||| ||||||||||||||||   |||||| |||||||||||||||||||||    
T  42755870 cataggcatatacatttctatcattttattcccaggaatcaacaattataacttgaaacaaaca 42755933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 41228780 - 41228719
Alignment:
Q  15 taggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||||| |||||||||||||  ||| || |||||||||||||||||||||    
T  41228780 taggcatatacattcctaccattttattcccgggaattaacaattataacttgaaacaaaca 41228719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 7317376 - 7317439
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||| |||||||||||||||||   ||||||||| || ||||||||||||||||||    
T  7317376 cataggcatatatattcctatcattttatttttgaaaatcaacaaatataacttgaaacaaaca 7317439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 7931248 - 7931305
Alignment:
Q  19 catatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||| ||||||||||||||||   |||||| |||||||||||||||||||||    
T  7931248 catatacatttctatcattttattcccaggaatcaacaattataacttgaaacaaaca 7931305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 40197138 - 40197081
Alignment:
Q  19 catatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||| ||||||||||||| |||  |||||| |||||||||||||||||||||    
T  40197138 catatacatttctatcattttatttccgggaatcaacaattataacttgaaacaaaca 40197081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 35394393 - 35394458
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaacaaa 78  Q
    ||||| |||||| ||| || ||||||||||| ||  |||||| || ||||||||||||||||||||    
T  35394393 catagacatatatatttctttcattttattctcgtgaatcaataaatataacttgaaacaaacaaa 35394458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 5020543 - 5020495
Alignment:
Q  28 tcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||||||||||||||||   |||||| || ||||||||||||||||||    
T  5020543 tcctatcattttattcccatgaatcaacaaatataacttgaaacaaaca 5020495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 2e-23; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 27481360 - 27481423
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  27481360 cataggcatatacattcctatcattttatttccaaaaatcaaaaattataacttgaaacaaaca 27481423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 4765628 - 4765565
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||    
T  4765628 cataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaaca 4765565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 12970598 - 12970535
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||    
T  12970598 cataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaaca 12970535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 14206889 - 14206826
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||    
T  14206889 cataggcatatacatttctatcattttattcccggaaatcaacaattataacttgaaacaaaca 14206826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 19065573 - 19065510
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||    
T  19065573 cataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaaca 19065510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 14 - 75
Target Start/End: Original strand, 8406898 - 8406959
Alignment:
Q  14 ataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaac 75  Q
    |||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  8406898 ataggcatgtacattcctatcattttattctcgaaaatcaacaattataacttgaaacaaac 8406959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 18412212 - 18412275
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||||||||||||||||||||   |||||| |||||||||||||||||||||    
T  18412212 cataggcatatacattcctatcattttattcccaggaatcaataattataacttgaaacaaaca 18412275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 22935980 - 22935917
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||||| |||||||||||||||  |||||| |||||||||||||||||||||    
T  22935980 cataggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaaca 22935917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 28602558 - 28602621
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||||| |||||||||||||||  |||||| |||||||||||||||||||||    
T  28602558 cataggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaaca 28602621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 36703877 - 36703940
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||| |||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||    
T  36703877 catagacatatacatttctatcattttattcccgataatcaacaattataacttgaaacaaaca 36703940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 555774 - 555711
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||| |||||||||| |||||||||||||||||  |||||| |||||||||||||||||||||    
T  555774 catagacatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaaca 555711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 6091718 - 6091781
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||||||||||||||  ||||||||||||||||  |||||| |||||||||||||||||||||    
T  6091718 cataggcatatacatttatatcattttattcccgggaatcaacaattataacttgaaacaaaca 6091781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 11855723 - 11855660
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||||||||||||||||||||||||||||| |   |||||| |||||||||||||||||||||    
T  11855723 cataggcatatacattcctatcattttattctcaggaatcaacaattataacttgaaacaaaca 11855660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 29543083 - 29543020
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||| |||||||||||| ||||||||||||||   |||||| |||||||||||||||||||||    
T  29543083 catagacatatacattccaatcattttattcccaggaatcaacaattataacttgaaacaaaca 29543020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 32535946 - 32536003
Alignment:
Q  19 catatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||| ||||||||||||||| |  |||||| ||||||||||| |||||||||    
T  32535946 catatacatttctatcattttattcctgggaatcaacaattataacttaaaacaaaca 32536003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 8646459 - 8646412
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaatta 60  Q
    ||||| ||||||||||||||||||||||||||||  |||||| |||||    
T  8646459 catagacatatacattcctatcattttattcccgggaatcaacaatta 8646412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 27481012 - 27481069
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaa 70  Q
    ||||| |||| | |||||||||||||||||| | |||||||| || ||||||||||||    
T  27481012 catagacatacatattcctatcattttattctcaaaaatcaacaaatataacttgaaa 27481069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 2e-23; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 48518959 - 48518896
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  48518959 cataggcatatacattcctatcattttattcccgggaatcaaaaattataacttgaaacaaaca 48518896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 13 - 75
Target Start/End: Original strand, 45596275 - 45596337
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaac 75  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  45596275 cataggcatatacatttctatcattttattcccgaaaatcaacaattataacttgaaacaaac 45596337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 27555417 - 27555480
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  27555417 catagacatatacattcctatcattttattcccgagaatcaacaattataacttgaaacaaaca 27555480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 35999693 - 35999756
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||    
T  35999693 cataggcatatacatttctatcattttattcccgagaatcaacaattataacttgaaacaaaca 35999756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 39730361 - 39730298
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  39730361 catagacatatacattcctatcattttattcccgggaatcaaaaattataacttgaaacaaaca 39730298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 41859115 - 41859052
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||    
T  41859115 cataggcatatacattccaatcattttattcccggaaatcaacaattataacttgaaacaaaca 41859052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 45747864 - 45747801
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||    
T  45747864 cataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaaca 45747801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 13230057 - 13229994
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||| |||||||||||||||||  ||| ||||||||||||||||||||||||    
T  13230057 cataggcatatacatttctatcattttattcccgggaataaaaaattataacttgaaacaaaca 13229994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 18931760 - 18931823
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||| |||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||    
T  18931760 catagacatatacattcctatcattttattcccagaaatcaacaattataacttgaaacaaaca 18931823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 27762967 - 27762904
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||||| |||||||||||||||  |||||| |||||||||||||||||||||    
T  27762967 cataggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaaca 27762904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 40435907 - 40435970
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||| |||||||||||||||||  |||||| |||||||||||||||||||||    
T  40435907 cataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaaca 40435970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 41744288 - 41744225
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||| |||||    
T  41744288 cataggcatatacatttctatcattttattcccggaaatcaacaattataacttgaaataaaca 41744225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 42773955 - 42774018
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||||| ||||||||||||||  ||||||| |||||||||||||||||||||    
T  42773955 cataggcatatacattccaatcattttattcccagaaatcaacaattataacttgaaacaaaca 42774018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 48879332 - 48879395
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||| |||||||||||||||||  |||||| |||||||||||||||||||||    
T  48879332 cataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaaca 48879395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 22 - 76
Target Start/End: Complemental strand, 25916094 - 25916040
Alignment:
Q  22 atacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  25916094 atacattcctatcattttattcccgggaatcaaaaattataacttgaaacaaaca 25916040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 6279989 - 6279926
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||| ||||||||||| ||||||||||||||||  |||||| |||||||||||||||||||||    
T  6279989 catagacatatacattcatatcattttattcccgggaatcaacaattataacttgaaacaaaca 6279926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 10400873 - 10400810
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||| |||||||||| |||||||||||||||| |||||||| || ||||||||||||||||||    
T  10400873 catagacatatacatttctatcattttattcccaaaaatcaacaaatataacttgaaacaaaca 10400810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 23686794 - 23686857
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||| ||| |||||||||||||||||  |||||| |||||||||||||||||||||    
T  23686794 cataggcatatatatttctatcattttattcccgggaatcaacaattataacttgaaacaaaca 23686857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 27942750 - 27942813
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||| |||||||||||||||||||||||| |||  |||||| |||||||||||||||||||||    
T  27942750 catagacatatacattcctatcattttatttccgggaatcaacaattataacttgaaacaaaca 27942813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 34049665 - 34049602
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||| |||||||||||||||||||||||| |||  |||||| |||||||||||||||||||||    
T  34049665 catagacatatacattcctatcattttatttccgggaatcaacaattataacttgaaacaaaca 34049602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 55968062 - 55968005
Alignment:
Q  19 catatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||| |||||||||||||||  |||||| |||||||||||||||||||||    
T  55968062 catatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaaca 55968005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 18405302 - 18405239
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||| |||| ||||||||| ||  |||||| |||||||||||||||||||||    
T  18405302 cataggcatatacatttctataattttattctcgggaatcaacaattataacttgaaacaaaca 18405239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 25932448 - 25932511
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||| |||||||||||||||    |||||| |||||||||||||||||||||    
T  25932448 cataggcatatacatttctatcattttattcctaggaatcaacaattataacttgaaacaaaca 25932511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 34237480 - 34237425
Alignment:
Q  21 tatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||| |||||||||||||||||  |||||| |||||||||||||||||||||    
T  34237480 tatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaaca 34237425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 39835375 - 39835312
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||| |||||||||||  ||||||||||||||||  |||||| |||||||||||||||||||||    
T  39835375 catatgcatatacatttatatcattttattcccgggaatcaacaattataacttgaaacaaaca 39835312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 43723271 - 43723334
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||| |||||||||||||  ||  |||||| |||||||||||||||||||||    
T  43723271 cataggcatatacatttctatcattttattttcgggaatcaacaattataacttgaaacaaaca 43723334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 47670369 - 47670432
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||| ||||||||||||| ||   |||||| |||||||||||||||||||||    
T  47670369 cataggcatatacatttctatcattttatttccaggaatcaacaattataacttgaaacaaaca 47670432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 76
Target Start/End: Original strand, 32953531 - 32953593
Alignment:
Q  14 ataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||||||||||||| |||| |  |||||| ||||||||||||| |||||||    
T  32953531 ataggcatatacattcctatcattttgttcctgggaatcaacaattataacttgagacaaaca 32953593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 39498838 - 39498895
Alignment:
Q  19 catatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||| ||||||||||||| |||  |||||| |||||||||||||||||||||    
T  39498838 catatacatttctatcattttatttccgggaatcaacaattataacttgaaacaaaca 39498895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 39502177 - 39502234
Alignment:
Q  19 catatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||| ||||||||||||| |||  |||||| |||||||||||||||||||||    
T  39502177 catatacatttctatcattttatttccgggaatcaacaattataacttgaaacaaaca 39502234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 936133 - 936196
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||| ||||| ||||| |||||||||||| ||  |||||| |||||||||||||||||||||    
T  936133 catagggatatatattccaatcattttattctcgggaatcaacaattataacttgaaacaaaca 936196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 8322252 - 8322308
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaa 69  Q
    ||||| |||||||||| ||||||||||||||||   |||||| ||||||||||||||    
T  8322252 catagacatatacatttctatcattttattcccaggaatcaacaattataacttgaa 8322308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 30415915 - 30415972
Alignment:
Q  19 catatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||| |||||||||||||||||  ||  |||||| || ||||||||||||||||||    
T  30415915 catatatattcctatcattttattatcgggaatcaacaaatataacttgaaacaaaca 30415972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 46
Target Start/End: Complemental strand, 50672973 - 50672940
Alignment:
Q  13 cataggcatatacattcctatcattttattcccg 46  Q
    ||||| ||||||||||||||||||||||||||||    
T  50672973 catagacatatacattcctatcattttattcccg 50672940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 2e-23; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 28124504 - 28124441
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  28124504 cataggcatatacattcctatcattttattcccgagaatcaacaattataacttgaaacaaaca 28124441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 33217981 - 33217918
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  33217981 cataggcatatacattcctatcattttattcccggaaatcaacaattataacttgaaacaaaca 33217918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 24574578 - 24574641
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||    
T  24574578 cataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaaca 24574641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 26849025 - 26849088
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||    
T  26849025 cataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaaca 26849088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 40908268 - 40908331
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||    
T  40908268 cataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaaca 40908331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 6231569 - 6231506
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||||||||||||||||||||||||||||| ||  |||||| |||||||||||||||||||||    
T  6231569 cataggcatatacattcctatcattttattctcgggaatcaacaattataacttgaaacaaaca 6231506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 11239188 - 11239125
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||| |||||||||||||||||  |||||| |||||||||||||||||||||    
T  11239188 cataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaaca 11239125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 20414533 - 20414470
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||||| ||||||||||||||  ||||||| |||||||||||||||||||||    
T  20414533 cataggcatatacattccaatcattttattcccagaaatcaacaattataacttgaaacaaaca 20414470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 44952311 - 44952374
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||| |||||||||||||||||  |||||| |||||||||||||||||||||    
T  44952311 cataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaaca 44952374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 48339825 - 48339762
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||||||||||||||  |||||||||||||||| ||||||| |||||||||||||||||||||    
T  48339825 cataggcatatacatttatatcattttattcccggaaatcaacaattataacttgaaacaaaca 48339762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 8476373 - 8476313
Alignment:
Q  16 aggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||||||||||||| |||||||||||||||  |||||| |||||||||||||||||||||    
T  8476373 aggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaaca 8476313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 9320509 - 9320453
Alignment:
Q  20 atatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||||||||||||||  |||||| |||||||||||||||||||||    
T  9320509 atatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaaca 9320453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 20297796 - 20297859
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||| ||||||||||||| |||  |||||| |||||||||||||||||||||    
T  20297796 cataggcatatacatttctatcattttatttccgggaatcaacaattataacttgaaacaaaca 20297859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 47114925 - 47114862
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||||| ||||||||||||||   |||||| |||||||||||||||||||||    
T  47114925 cataggcatatacattccaatcattttattcccaggaatcaacaattataacttgaaacaaaca 47114862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 1099201 - 1099264
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||| ||||||||| |||||||||||||||||  |||||| ||||||||||| |||||||||    
T  1099201 catagggatatacatttctatcattttattcccgggaatcaacaattataacttaaaacaaaca 1099264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 43132225 - 43132162
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||| |||||||| ||||||||| ||| |||||| || ||||||||||||||||||    
T  43132225 cataggcatatatattcctattattttattctcgagaatcaacaaatataacttgaaacaaaca 43132162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 31435991 - 31435928
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||| |||||||||||||| |   |||||| || ||||||||||||||||||    
T  31435991 cataggcatatacatttctatcattttattctcaggaatcaacaaatataacttgaaacaaaca 31435928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 43715370 - 43715313
Alignment:
Q  19 catatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||| |||||||||||||  ||  |||||| |||||||||||||||||||||    
T  43715370 catatacatttctatcattttattttcgggaatcaacaattataacttgaaacaaaca 43715313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 9320446 - 9320407
Alignment:
Q  15 taggcatatacattcctatcattttattcccgaaaatcaa 54  Q
    |||| |||||||||||||||||||||||||||| ||||||    
T  9320446 taggtatatacattcctatcattttattcccgagaatcaa 9320407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 10822786 - 10822733
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataactt 66  Q
    ||||| |||||||| | ||||||||||||||||| ||||||| || ||||||||    
T  10822786 catagacatatacacttctatcattttattcccggaaatcaacaaatataactt 10822733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 35 - 76
Target Start/End: Original strand, 29512704 - 29512745
Alignment:
Q  35 attttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||  |||| ||||||||||||||||||||||||    
T  29512704 attttattcccagaaattaaaaattataacttgaaacaaaca 29512745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 31611053 - 31611004
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattata 62  Q
    ||||| |||||||||||| |||||||||||||||  |||||| |||||||    
T  31611053 catagacatatacattccaatcattttattcccgggaatcaacaattata 31611004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 2e-23; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 11071608 - 11071671
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  11071608 cataggcatatacattcctatcattttattcccggaaatcaacaattataacttgaaacaaaca 11071671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 346413 - 346350
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||    
T  346413 cataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaaca 346350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 37533955 - 37534018
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  37533955 catagacatatacattcctatcattttattcccggaaatcaacaattataacttgaaacaaaca 37534018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 39995199 - 39995136
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||    
T  39995199 cataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaaca 39995136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 638596 - 638659
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||| |||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  638596 catagacatatacattcctatcattttatttccggaaatcaacaattataacttgaaacaaaca 638659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 5770178 - 5770115
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||||||||||||||||||||   |||||| |||||||||||||||||||||    
T  5770178 cataggcatatacattcctatcattttattcccaggaatcaacaattataacttgaaacaaaca 5770115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 6171794 - 6171857
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||||||||||||||||||||||||||||| ||  |||||| |||||||||||||||||||||    
T  6171794 cataggcatatacattcctatcattttattctcgggaatcaacaattataacttgaaacaaaca 6171857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 9733914 - 9733851
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||| |||||||||||||||||  |||||| |||||||||||||||||||||    
T  9733914 cataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaaca 9733851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 13760948 - 13761011
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||| | ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  13760948 cataggtacatatattcctatcattttattcccgaaaatcaataattataacttgaaacaaaca 13761011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 21737468 - 21737405
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||| ||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||    
T  21737468 catagacatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaaca 21737405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 41729198 - 41729135
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||||||||| ||||||||||||||||||||||  ||| ||||||||||||||||||||||||    
T  41729198 cataggcatatccattcctatcattttattcccgggaataaaaaattataacttgaaacaaaca 41729135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 42674729 - 42674666
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||||| |||||||||||||||  |||||| |||||||||||||||||||||    
T  42674729 cataggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaaca 42674666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 2050869 - 2050932
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||| |||||||||||||||||||||||| ||  |||||| |||||||||||||||||||||    
T  2050869 cataggtatatacattcctatcattttattctcgggaatcaacaattataacttgaaacaaaca 2050932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 14777566 - 14777503
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||||| |||||||||||||||  |||||| |||||||| ||||||||||||    
T  14777566 cataggcatatacattccaatcattttattcccgggaatcaacaattataaattgaaacaaaca 14777503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 28311765 - 28311702
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||| |||||||||||||||||||||  |||||| || ||||||||||||||||||    
T  28311765 cataggcatatatattcctatcattttattcccgggaatcaacaaatataacttgaaacaaaca 28311702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 34356768 - 34356705
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||| |||||||||| |||||||||||||||||  |||||| |||||||||||||||||||||    
T  34356768 catagacatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaaca 34356705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 37192525 - 37192588
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||| |||||||||| |||||||||||||||||  |||||| |||||||||||||||||||||    
T  37192525 catagacatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaaca 37192588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 40950927 - 40950864
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||| ||||||| ||| |||||||||||||||||| |||||| |||||||||||||||||||||    
T  40950927 cataagcatatatatttctatcattttattcccgagaatcaacaattataacttgaaacaaaca 40950864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 2521678 - 2521741
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||||| |||||||||||  ||  |||||| |||||||||||||||||||||    
T  2521678 cataggcatatacattccaatcattttattttcgggaatcaacaattataacttgaaacaaaca 2521741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 4559562 - 4559625
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||||| ||||||||||||  |  |||||| |||||||||||||||||||||    
T  4559562 cataggcatatacattccaatcattttattcttgggaatcaacaattataacttgaaacaaaca 4559625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 20426551 - 20426488
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||| |||||||||||||||||||||  |||||| || ||||| ||||||||||||    
T  20426551 cataggcatataaattcctatcattttattcccgggaatcaacaaatataatttgaaacaaaca 20426488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 14 - 77
Target Start/End: Original strand, 26310273 - 26310336
Alignment:
Q  14 ataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaacaa 77  Q
    |||| |||||||||| |||||||||||||||||  |||||| ||||||||||| ||||||||||    
T  26310273 atagacatatacatttctatcattttattcccgggaatcaacaattataactttaaacaaacaa 26310336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 37233432 - 37233495
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||||||||||  ||||||||||||||||||||  |||||| || ||||||||||||||||||    
T  37233432 cataggcatatatgttcctatcattttattcccgggaatcaacaaatataacttgaaacaaaca 37233495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 41750532 - 41750595
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||| |||||||||||||||    |||||| |||||||||||||||||||||    
T  41750532 cataggcatatacatttctatcattttattcctaggaatcaacaattataacttgaaacaaaca 41750595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 6571690 - 6571751
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaa 74  Q
    |||||||||||| ||||||||||||||||| ||| ||||||| || |||||||| |||||||    
T  6571690 cataggcatatatattcctatcattttatttccggaaatcaacaaatataactttaaacaaa 6571751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 17965986 - 17966049
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||| |||||||||||| |||||||||||  ||  |||||| |||||||||||||||||||||    
T  17965986 catagacatatacattccaatcattttattatcgggaatcaacaattataacttgaaacaaaca 17966049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 45409253 - 45409316
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||||||||||||||||||||||||||| |  |  |||||| || ||||||||||||||||||    
T  45409253 cataggcatatacattcctatcattttatacttgggaatcaacaaatataacttgaaacaaaca 45409316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 11763439 - 11763382
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaa 70  Q
    ||||| |||||| ||||||||||||| ||||||||||| ||| || ||||||||||||    
T  11763439 catagacatatatattcctatcatttcattcccgaaaaacaacaaatataacttgaaa 11763382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 1988314 - 1988377
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||||||| || ||| ||||||||||||||||  ||||||| || |||||||| |||||||||    
T  1988314 cataggcatgtatatttctatcattttattcccagaaatcaacaaatataacttcaaacaaaca 1988377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 14832813 - 14832876
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||| ||| |||||||||||||||    |||||| || ||||||||||||||||||    
T  14832813 cataggcatatatatttctatcattttattcctaggaatcaacaaatataacttgaaacaaaca 14832876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 27358031 - 27357968
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||| ||||||||| ||||||||||||| || |  |||||| || ||||||||||||||||||    
T  27358031 catagacatatacatccctatcattttatacctgggaatcaacaaatataacttgaaacaaaca 27357968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 14253525 - 14253578
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataactt 66  Q
    ||||| |||||| ||| |||||||||||||||||| |||||| || ||||||||    
T  14253525 catagacatatatatttctatcattttattcccgagaatcaacaaatataactt 14253578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 2e-23; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 1597410 - 1597347
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  1597410 cataggcatatacattcctatcattttattcccggaaatcaacaattataacttgaaacaaaca 1597347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 12190245 - 12190182
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  12190245 cataggcatgtacattcctatcattttattcccgaaaatcaacaattataacttgaaacaaaca 12190182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 2430500 - 2430563
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||    
T  2430500 cataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaaca 2430563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 3572633 - 3572570
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||    
T  3572633 cataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaaca 3572570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 6911497 - 6911560
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||    
T  6911497 cataggcatatacattcttatcattttattcccgagaatcaacaattataacttgaaacaaaca 6911560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 8332018 - 8332081
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||    
T  8332018 cataggcatatacattccaatcattttattcccggaaatcaacaattataacttgaaacaaaca 8332081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 36361786 - 36361849
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||    
T  36361786 cataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaaca 36361849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 49822985 - 49822922
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||    
T  49822985 cataggcatatacatttctatcattttattcccgagaatcaacaattataacttgaaacaaaca 49822922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 2632856 - 2632919
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||||||||||||||||||| ||||||||||||  |||||| |||||||||||||||||||||    
T  2632856 cataggcatatacattcctattattttattcccgggaatcaacaattataacttgaaacaaaca 2632919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 6978774 - 6978837
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||| |||||||||||||||||  |||||| |||||||||||||||||||||    
T  6978774 cataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaaca 6978837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 9115841 - 9115904
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||| |||||||||||||||||  |||||| |||||||||||||||||||||    
T  9115841 cataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaaca 9115904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 14788727 - 14788790
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||| ||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||    
T  14788727 catagacatatacattcctattattttattcccgggaatcaaaaattataacttgaaacaaaca 14788790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 25789767 - 25789830
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||| |||||||||||||||||  |||||| |||||||||||||||||||||    
T  25789767 cataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaaca 25789830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 32824926 - 32824989
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||||||||||||||||||| |||||||| ||| ||||||| |||||||||||||||||||||    
T  32824926 cataggcatatacattcctattattttatttccggaaatcaacaattataacttgaaacaaaca 32824989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 39930461 - 39930524
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||| |||||||||||||||||  |||||| |||||||||||||||||||||    
T  39930461 cataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaaca 39930524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 46666712 - 46666775
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||||| |||||||||||||||  |||||| |||||||||||||||||||||    
T  46666712 cataggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaaca 46666775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 5806356 - 5806296
Alignment:
Q  16 aggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||||||||||| |||||||||||||||||  |||||| |||||||||||||||||||||    
T  5806356 aggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaaca 5806296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 9831938 - 9831875
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||| ||||||||||||||| |  |||||| |||||||||||||||||||||    
T  9831938 cataggcatatacatttctatcattttattcctgggaatcaacaattataacttgaaacaaaca 9831875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 20260154 - 20260091
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||||| ||||||||||||||   |||||| |||||||||||||||||||||    
T  20260154 cataggcatatacattccaatcattttattcccaggaatcaacaattataacttgaaacaaaca 20260091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 38964747 - 38964684
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||| ||||||||||| |||||||||||||||||  |||||| |||||||||||||||||||||    
T  38964747 cataagcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaaca 38964684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 39329612 - 39329675
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||| |||||||||||| |||||||||||||||  |||||| |||||||||||||||||||||    
T  39329612 catagacatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaaca 39329675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 47037461 - 47037524
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||| ||| |||||||||||||||||  |||||| |||||||||||||||||||||    
T  47037461 cataggcatatatatttctatcattttattcccgggaatcaacaattataacttgaaacaaaca 47037524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 52630777 - 52630840
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||| |||||||||||||||||||||||||||   |||||| |||||||||||||||||||||    
T  52630777 catagacatatacattcctatcattttattcccaggaatcaacaattataacttgaaacaaaca 52630840  T

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Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 51445148 - 51445085
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||| |||||||||  ||||||||||||||||  |||||| |||||||||||||||||||||    
T  51445148 cataggtatatacatttatatcattttattcccgggaatcaacaattataacttgaaacaaaca 51445085  T

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Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 75
Target Start/End: Original strand, 30241013 - 30241075
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaac 75  Q
    |||||||||||| ||| ||||||||||||| || |||||||| || |||||||||||||||||    
T  30241013 cataggcatatatatttctatcattttattaccaaaaatcaacaaatataacttgaaacaaac 30241075  T

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Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 4683442 - 4683381
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaa 74  Q
    |||||||||||||||||||||||||||||| | |  |||||| |||||||| ||||||||||    
T  4683442 cataggcatatacattcctatcattttatttctgggaatcaacaattataaattgaaacaaa 4683381  T

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Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 35187466 - 35187523
Alignment:
Q  19 catatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||| |||||||||||||||||  |||||| ||||||||||||||| |||||    
T  35187466 catatacatttctatcattttattcccgggaatcaacaattataacttgaaaaaaaca 35187523  T

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Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 50190831 - 50190770
Alignment:
Q  15 taggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||||| ||||||||| ||| |||| || ||||||| |||||||||||||    
T  50190831 taggcatatacattcctagcattttatttccggaaattaacaattatatcttgaaacaaaca 50190770  T

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Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 5518572 - 5518509
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||| ||| ||||||||||||||| |  |||||| || ||||||||||||||||||    
T  5518572 cataggcatatatatttctatcattttattcctgggaatcaacaaatataacttgaaacaaaca 5518509  T

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Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 32202394 - 32202336
Alignment:
Q  18 gcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||||||||| |||||||||||||  ||  |||||| |||||||||||||||||||||    
T  32202394 gcatatacatttctatcattttattttcgggaatcaacaattataacttgaaacaaaca 32202336  T

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Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 37436689 - 37436630
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaaca 72  Q
    |||| |||||||||||||||||||||||||| ||  |||||| || |||||| |||||||    
T  37436689 catatgcatatacattcctatcattttattctcgtgaatcaacaaatataacatgaaaca 37436630  T

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Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 48916090 - 48916027
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||| |||||||||||||| |   |||||| || |||||||||||| |||||    
T  48916090 cataggcatatacatttctatcattttattctctggaatcaacaaatataacttgaaataaaca 48916027  T

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Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 1007757 - 1007814
Alignment:
Q  19 catatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||| |||| ||||||||||||| ||  |||||| || ||||||||||||||||||    
T  1007757 catatatattcatatcattttattctcgggaatcaacaaatataacttgaaacaaaca 1007814  T

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Target: scaffold0006 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 201928 - 201991
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||    
T  201928 cataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaaca 201991  T

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Target: chr6 (Bit Score: 52; Significance: 5e-21; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 7053638 - 7053575
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||    
T  7053638 cataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaaca 7053575  T

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Target: chr6; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 14171016 - 14171079
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  14171016 cataggcatatagattcctatcattttattcccgggaatcaaaaattataacttgaaacaaaca 14171079  T

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Target: chr6; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 1317021 - 1317084
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||||| |||||||||||||||  |||||| |||||||||||||||||||||    
T  1317021 cataggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaaca 1317084  T

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Target: chr6; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 2657703 - 2657766
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||| |||||||||||||||||||||||||||  |||||| |||||||||||||||||||||    
T  2657703 cataggtatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaaca 2657766  T

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Target: chr6; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 8029336 - 8029399
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||| |||||||||||||||||  |||||| |||||||||||||||||||||    
T  8029336 cataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaaca 8029399  T

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Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 18897924 - 18897987
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||| |||||| |||||| |||  |||||| |||||||||||||||||||||    
T  18897924 cataggcatatacatttctatcactttatttccgggaatcaacaattataacttgaaacaaaca 18897987  T

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Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 14 - 76
Target Start/End: Complemental strand, 7344150 - 7344088
Alignment:
Q  14 ataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaaca 76  Q
    |||||||||||||||||||||||||||||| || ||||  | |||||||| ||||||| ||||    
T  7344150 ataggcatatacattcctatcattttattctcggaaatttacaattataatttgaaacgaaca 7344088  T

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Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 16968928 - 16968989
Alignment:
Q  13 cataggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaa 74  Q
    ||||| |||||| |||||||||||||||||| |   |||||| |||||||||||||||||||    
T  16968928 catagacatatagattcctatcattttattctcaggaatcaacaattataacttgaaacaaa 16968989  T

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