View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16541_low_2 (Length: 474)
Name: NF16541_low_2
Description: NF16541
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16541_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 435; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 435; E-Value: 0
Query Start/End: Original strand, 19 - 469
Target Start/End: Original strand, 38584501 - 38584951
Alignment:
| Q |
19 |
tgttatttaaagtttaatttgtgttctaattagctatttatgataaaatagttgtttgttcatttgaatttagcgtgaactatattgaactaaaagttgt |
118 |
Q |
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| T |
38584501 |
tgttatttaaagtttaatttgtgttctaattagctatttatgataaaatagttgtttgttcatttgaatttagcgtgaactatattgaactaaaagttgt |
38584600 |
T |
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| Q |
119 |
actattattgttatctgtattcagtttgcaggaaatgcatttatgacaaatttactgatgaggatttggaatgctgtccagtatgtaagattgatttggg |
218 |
Q |
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| T |
38584601 |
actattattgttatctgtattcagtttgcaggaaatgcatttatgacaaatttactgatgaggatttggaatgctgtccagtatgcaacattgatttggg |
38584700 |
T |
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| Q |
219 |
ttgtgttccacttgagaaactaaggtaaatcttctctgcctttgaccaattttcaactcattcttattctctttcaaacttctacttcttcttttaaaac |
318 |
Q |
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| T |
38584701 |
ttgtgttccacttgagaaactaaggtaaatcttctctgcctttgaccaattttcaactcattcttattctctttcaaacttctacttcttcttttaaaac |
38584800 |
T |
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| Q |
319 |
acattagaatgtacctatcataatttgagttgaccaatatgcatgaaaattgtggatgtaactatataagctctgccgtgagtgtatttttaaggctggt |
418 |
Q |
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| T |
38584801 |
acattagaatgtacctatcataatttgagttgaccaatatgcatgaaaattgtggatgtaactatataagctctgccgtgagtgtatttttaaggctggt |
38584900 |
T |
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| Q |
419 |
ttatgactttatgctatgttggtgatatcaattttgttgccctatgctact |
469 |
Q |
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| T |
38584901 |
ttatgactttatgctatgttggtgatatcaattttgttgccttatgatact |
38584951 |
T |
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